Rmu_sc0006413.1_g000018

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006413.1
OG0000268
Physical Location & Seq
Reverse (-)
136396 .. 143638
7243 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006413.1_g000018.1.cds

Sequence Viewer

Length: 1863 bp
atgaacgctcgtgttgcccatgtgaagacccaccatgatgtaacgggttttgagatcaaacggcagcggcggccggccgagtctagcgacaccgaacgtcaagctctcctcttctctttgaaggatcgtccttctcttcgattagagcctggttgcagtcgagggcaggaggctgttggttcaaggtgtggctacaacatttctgatcatgtcgagaggttgcggaggggtctttcggcgcttgacaatagaggattctcggcaattgatgctatggaaaggaagccagccggaaatcatgccggcggtggagacggagtgtgtagaaaactgggttctagttcaactgttgaaaacaagttcagagcttttgacgacttttggattgatgaagcagagtttggggacagaagagggacagaggaaaaggggacaccggaattgtacacactttgcttggcatgctctactctcaatcacagtagaggagcattggaggctgacatggatgagttgatgaatatcggcggtctcaaggacagaggaaaaagacctaggaagtacattgagaagaaacaacctagcaaactcagtttttttaatttttttacaattaaatctcaagagatgaaggagaaaaacattaaggtggatgttatggttaggagacagctggctaatacatggaggtccatgaaacctgaagagaaggcaaagtatgctgggtcatatccatgtgttaaagttggttgtagggaattcagacatgatttttgtggattgaaacctataatcacccaatgtcgtccagatgtttttaaagatgtcatttcaacattttctgatgaaagaaaagctgcagtagaagaaatgggttttgggttactattgcagcttcgctgtgaccaattgcagtgcaccttgtgtggttggttggttgatagatttgatcctgatgcatcttcaattgaggtacatggtaagacattcaagcttaaaccatctgactttgagaatataatgggggtcaaagatggaggacatgatgttgagctaagtgactcagaggataacaacatacacggactaaagattatccgttgtggaaaagatagaagtcatataagtatgagagaaatagctaagaggttgagacagacaaatatcgtcgatgacacctttagagttgggttcgtgttatttttgctgggcaccttgctttgtccttcttcaattatattggcttcaaagtacctgcaaccattaagggaaaccagtgatataaaattcaaaaattgggcgacattctcattcaaatatctagttgaaggtgttagttcctttaagaatagaaaacgatcctgtgtgatcaatggatgtgtactattcttgcagctcttttattttgatctcattgttcatggaagaacgtttgtaaataggtcgttagcacccattgttgcatggggagataaggaggcaaatgaattaattaagtggatcaggactcacaaagggggttttgatagtgtggacattactgttgtttctgaccgtacagccttgatcagcaaggaagatgaggtggccctgaagaatggtcttgggagtgtacacataatggttactgcaaatgaacggatgcagcgaaagacaaatgatgaaatgaaagtggctgaattggaagctaaacttgacagtgagatgagcaaaattgaaggccttacttactggcaagtctttcaagctactaacattttggctacaagatttgacctgctgagcacgtttcttcccatgtcccaggaaaggaagaaggattatgttttatatctcttagagcatggcacccatggcttgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

620

Amino Acids

70.42

Weight (kDa)

8.82

Isoelectric Point (pI)

41.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000268)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23642 FvH4_2g09911 FvH4_2g09911 FvH4_2g09911 FvH4_3g18421 FvH4_4g05321 FvH4_6g28332 FvH4_7g31231
prunus_persica Prupe.2G063700_v2.0.a1 Prupe.5G238300_v2.0.a1 Prupe.6G153700_v2.0.a1 Prupe.7G017400_v2.0.a1 Prupe.7G070100_v2.0.a1 Prupe.7G070100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0345471 RchiOBHm_Chr1g0366901 RchiOBHm_Chr2g0162601 RchiOBHm_Chr6g0266661 RchiOBHm_Chr6g0266671
rosa_laevigata RLG00000005047 RLG00000007971 RLG00000008530 RLG00000009009 RLG00000009046 RLG00000014086 RLG00000017162 RLG00000017163 RLG00000017440 RLG00000019098 RLG00000022623 RLG00000024566 RLG00000027733 RLG00000029878 RLG00000029945 RLG00000030127 RLG00000030157 RLG00000031078 RLG00000031080 RLG00000034338 RLG00000034670
rosa_multiflora Rmu_sc0002106.1_g000007 Rmu_sc0002531.1_g000064 Rmu_sc0003433.1_g000005 Rmu_sc0004704.1_g000001 Rmu_sc0004704.1_g000002 Rmu_sc0004888.1_g000042 Rmu_sc0005599.1_g000031 Rmu_sc0006413.1_g000014 Rmu_sc0006413.1_g000018
rosa_roxburghii Rroxscaffold_1G00031940 Rroxscaffold_1G00032500 Rroxscaffold_1G00074770 Rroxscaffold_1G00074780 Rroxscaffold_1G00075150 Rroxscaffold_2G00125060 Rroxscaffold_2G00125070 Rroxscaffold_2G00125800 Rroxscaffold_2G00125820 Rroxscaffold_2G00139560 Rroxscaffold_2G00140550 Rroxscaffold_4G00314090 Rroxscaffold_6G00390050 Rroxscaffold_6G00390520 Rroxscaffold_6G00390530 Rroxscaffold_6G00428030 Rroxscaffold_7G00201570 Rroxscaffold_7G00201580 Rroxscaffold_7G00207070 Rroxscaffold_7G00207080 Rroxscaffold_7G00207240
rosa_rugosa Rorug01G0408000 Rorug01G0408100 Rorug01G0408100 Rorug01G0408200 Rorug02G0155200 Rorug02G0181500 Rorug02G0288400 Rorug03G0208600 Rorug03G0272300 Rorug06G0005500 Rorug06G0005600 Rorug06G0026300.1 Rorug06G0026400 Rorug06G0026500 Rorug06G0026600 Rorug06G0026600 Rorug06G0026600 Rorug06G0145800 Rorug07G0305200
rosa_samantha Rh1AG062100 Rh1BG131900 Rh1BG157000 Rh1CG021100 Rh1CG321600 Rh1DG188200 Rh2DG388300 Rh3AG320500 Rh3BG355400 Rh3CG352400 Rh3CG353200 Rh4AG045800 Rh4DG171700 Rh5AG196000 Rh5AG196100 Rh5CG346800 Rh6BG147600 Rh6BG147700 Rh6CG143200 Rh6CG143500 Rh6CG174600 Rh6CG391800 Rh6DG132100 Rh6DG132300 Rh6DG167100 Rh6DG167200 Rh7AG211600 Rh7BG307000 Rh7BG307300 Rh7BG398300
rosa_wichuraiana Rw0G001830 Rw0G001840 Rw0G018160 Rw0G018170 Rw3G028040 Rw5G017860 Rw5G026710 Rw6G012630 Rw6G012650 Rw6G012780 Rw6G012800 Rw7G019130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1263, 1785
AccB1I GGYRCC 2 cut(s) 1211, 1847
AciI CCGC 5 cut(s) 67, 70, 223, 306, 528
AclI AACGTT 1 cut(s) 1430
AclWI GGATC 4 cut(s) 132, 944, 1353, 1508
AcoI YGGCCR 2 cut(s) 71, 75
AcsI RAATTY 2 cut(s) 758, 1286
AcuI CTGAAG 2 cut(s) 723, 1613
AdeI CACNNNGTG 1 cut(s) 924
AfaI GTAC 7 cut(s) 446, 563, 975, 1253, 1383, 1558, 1614
AfiI CCNNNNNNNGG 1 cut(s) 1809
AjnI CCWGG 2 cut(s) 148, 1803
AjuI GAANNNNNNNTTGG 4 cut(s) 384, 416, 861, 893
Alw21I GWGCWC 2 cut(s) 920, 1787
Alw26I GTCTC 4 cut(s) 306, 536, 661, 1147
Alw44I GTGCAC 1 cut(s) 916
AlwI GGATC 4 cut(s) 132, 944, 1353, 1508
AoxI GGCC 4 cut(s) 71, 75, 1587, 1720
ApaLI GTGCAC 1 cut(s) 916
ApeKI GCWGC 5 cut(s) 64, 857, 892, 1393, 1645
ApoI RAATTY 2 cut(s) 758, 1286
ArsI GACNNNNNNTTYG 2 cut(s) 756, 788
AseI ATTAAT 1 cut(s) 1490
AspA2I CCTAGG 1 cut(s) 554
AspLEI GCGC 1 cut(s) 241
AspS9I GGNCC 2 cut(s) 690, 1588
AsuHPI GGTGA 1 cut(s) 787
AvaII GGWCC 1 cut(s) 690
AvrII CCTAGG 1 cut(s) 554
BaeGI GKGCMC 2 cut(s) 920, 1214
BanI GGYRCC 2 cut(s) 1211, 1847
BauI CACGAG 1 cut(s) 9
BbsI GAAGAC 1 cut(s) 32
Bbv12I GWGCWC 2 cut(s) 920, 1787
BbvI GCAGC 5 cut(s) 76, 844, 904, 1405, 1657
BccI CCATC 2 cut(s) 1009, 1028
BceAI ACGGC 1 cut(s) 77
BciT130I CCWGG 2 cut(s) 150, 1805
BclI TGATCA 3 cut(s) 205, 1368, 1566
BcoDI GTCTC 4 cut(s) 306, 536, 661, 1147
BfaI CTAG 5 cut(s) 84, 339, 555, 582, 1322
BfmI CTRYAG 1 cut(s) 858
BfoI RGCGCY 1 cut(s) 242
BfuAI ACCTGC 2 cut(s) 1263, 1785
BisI GCNGC 7 cut(s) 65, 68, 71, 858, 893, 1394, 1646
BlnI CCTAGG 1 cut(s) 554
BlpI GCTNAGC 1 cut(s) 1781
BlsI GCNGC 7 cut(s) 66, 69, 72, 859, 894, 1395, 1647
Bme1390I CCNGG 2 cut(s) 150, 1805
Bme18I GGWCC 1 cut(s) 690
BmgT120I GGNCC 2 cut(s) 690, 1588
BmiI GGNNCC 2 cut(s) 1213, 1849
BmrFI CCNGG 2 cut(s) 150, 1805
BmrI ACTGGG 1 cut(s) 341
BmsI GCATC 4 cut(s) 259, 946, 968, 1632
BmuI ACTGGG 1 cut(s) 341
BpiI GAAGAC 1 cut(s) 32
Bpu1102I GCTNAGC 1 cut(s) 1781
BpuEI CTTGAG 2 cut(s) 518, 606
BsaBI GATNNNNATC 1 cut(s) 521
BsaI GGTCTC 1 cut(s) 536
BsaJI CCNNGG 3 cut(s) 554, 1803, 1852
BsaWI WCCGGW 1 cut(s) 436
BsaXI ACNNNNNCTCC 2 cut(s) 303, 333
Bsc4I CCNNNNNNNGG 1 cut(s) 1809
Bse118I RCCGGY 2 cut(s) 73, 302
Bse1I ACTGG 3 cut(s) 336, 1275, 1736
Bse8I GATNNNNATC 1 cut(s) 521
BseBI CCWGG 2 cut(s) 150, 1805
BseDI CCNNGG 3 cut(s) 554, 1803, 1852
BseGI GGATG 4 cut(s) 514, 658, 1382, 1647
BseJI GATNNNNATC 1 cut(s) 521
BseLI CCNNNNNNNGG 1 cut(s) 1809
BseMII CTCAG 3 cut(s) 604, 1077, 1772
BseNI ACTGG 3 cut(s) 336, 1275, 1736
BseRI GAGGAG 2 cut(s) 98, 501
BseSI GKGCMC 2 cut(s) 920, 1214
BseX3I CGGCCG 2 cut(s) 71, 75
BseXI GCAGC 5 cut(s) 76, 844, 904, 1405, 1657
BseYI CCCAGC 2 cut(s) 722, 1207
Bsh1285I CGRYCG 2 cut(s) 74, 78
BshFI GGCC 4 cut(s) 73, 77, 1589, 1722
BshNI GGYRCC 2 cut(s) 1211, 1847
BsiEI CGRYCG 2 cut(s) 74, 78
BsiHKAI GWGCWC 2 cut(s) 920, 1787
BsiSI CCGG 4 cut(s) 74, 291, 303, 437
BslFI GGGAC 4 cut(s) 419, 430, 445, 1786
BslI CCNNNNNNNGG 1 cut(s) 1809
BsmAI GTCTC 4 cut(s) 306, 536, 661, 1147
BsmBI CGTCTC 1 cut(s) 306
BsmFI GGGAC 4 cut(s) 419, 430, 445, 1786
BsnI GGCC 4 cut(s) 73, 77, 1589, 1722
Bso31I GGTCTC 1 cut(s) 536
Bsp1286I GDGCHC 3 cut(s) 920, 1214, 1787
Bsp1407I TGTACA 2 cut(s) 444, 1612
Bsp143I GATC 9 cut(s) 54, 124, 205, 949, 1358, 1368, 1408, 1500, 1566
Bsp1720I GCTNAGC 1 cut(s) 1781
Bsp19I CCATGG 1 cut(s) 1852
BspACI CCGC 5 cut(s) 67, 70, 223, 306, 528
BspANI GGCC 4 cut(s) 73, 77, 1589, 1722
BspCNI CTCAG 3 cut(s) 603, 1076, 1773
BspLI GGNNCC 2 cut(s) 1213, 1849
BspMAI CTGCAG 1 cut(s) 862
BspMI ACCTGC 2 cut(s) 1263, 1785
BspPI GGATC 4 cut(s) 132, 944, 1353, 1508
BspT107I GGYRCC 2 cut(s) 1211, 1847
BspTNI GGTCTC 1 cut(s) 536
BsrFI RCCGGY 2 cut(s) 73, 302
BsrGI TGTACA 2 cut(s) 444, 1612
BsrI ACTGG 3 cut(s) 336, 1275, 1736
BssAI RCCGGY 2 cut(s) 73, 302
BssECI CCNNGG 3 cut(s) 554, 1803, 1852
BssMI GATC 9 cut(s) 54, 124, 205, 949, 1358, 1368, 1408, 1500, 1566
BssSI CACGAG 1 cut(s) 9
BssT1I CCWWGG 2 cut(s) 554, 1852
Bst2BI CACGAG 1 cut(s) 9
Bst2UI CCWGG 2 cut(s) 150, 1805
Bst4CI ACNGT 5 cut(s) 349, 482, 1543, 1556, 1700
Bst6I CTCTTC 4 cut(s) 116, 141, 406, 699
BstAPI GCANNNNNTGC 2 cut(s) 269, 719
BstAUI TGTACA 2 cut(s) 444, 1612
BstC8I GCNNGC 5 cut(s) 75, 288, 304, 463, 675
BstDEI CTNAG 6 cut(s) 590, 1055, 1063, 1143, 1781, 1837
BstDSI CCRYGG 1 cut(s) 1852
BstF5I GGATG 4 cut(s) 514, 658, 1382, 1647
BstH2I RGCGCY 1 cut(s) 242
BstHHI GCGC 1 cut(s) 241
BstKTI GATC 9 cut(s) 57, 127, 208, 952, 1361, 1371, 1411, 1503, 1569
BstMAI GTCTC 4 cut(s) 306, 536, 661, 1147
BstMBI GATC 9 cut(s) 54, 124, 205, 949, 1358, 1368, 1408, 1500, 1566
BstMCI CGRYCG 2 cut(s) 74, 78
BstMWI GCNNNNNNNGC 7 cut(s) 14, 70, 269, 462, 497, 719, 1854
BstNI CCWGG 2 cut(s) 150, 1805
BstNSI RCATGY 1 cut(s) 465
BstSCI CCNGG 2 cut(s) 148, 1803
BstSFI CTRYAG 1 cut(s) 858
BstSLI GKGCMC 2 cut(s) 920, 1214
BstV1I GCAGC 5 cut(s) 76, 844, 904, 1405, 1657
BstV2I GAAGAC 1 cut(s) 32
BstZI CGGCCG 2 cut(s) 71, 75
BsuRI GGCC 4 cut(s) 73, 77, 1589, 1722
BtgI CCRYGG 1 cut(s) 1852
BtsCI GGATG 4 cut(s) 514, 658, 1382, 1647
BtsI GCAGTG 1 cut(s) 920
BtsIMutI CAGTG 3 cut(s) 920, 1282, 1705
BveI ACCTGC 2 cut(s) 1263, 1785
Cac8I GCNNGC 5 cut(s) 75, 288, 304, 463, 675
CfoI GCGC 1 cut(s) 241
Cfr10I RCCGGY 2 cut(s) 73, 302
Cfr13I GGNCC 2 cut(s) 690, 1588
Csp6I GTAC 7 cut(s) 445, 562, 974, 1252, 1382, 1557, 1613
CviQI GTAC 7 cut(s) 445, 562, 974, 1252, 1382, 1557, 1613
DdeI CTNAG 6 cut(s) 590, 1055, 1063, 1143, 1781, 1837
DpnI GATC 9 cut(s) 56, 126, 207, 951, 1360, 1370, 1410, 1502, 1568
DpnII GATC 9 cut(s) 54, 124, 205, 949, 1358, 1368, 1408, 1500, 1566
DraI TTTAAA 1 cut(s) 820
DraIII CACNNNGTG 1 cut(s) 924
EaeI YGGCCR 2 cut(s) 71, 75
EagI CGGCCG 2 cut(s) 71, 75
Eam1104I CTCTTC 4 cut(s) 116, 141, 406, 699
EarI CTCTTC 4 cut(s) 116, 141, 406, 699
EclXI CGGCCG 2 cut(s) 71, 75
Eco130I CCWWGG 2 cut(s) 554, 1852
Eco147I AGGCCT 1 cut(s) 1722
Eco31I GGTCTC 1 cut(s) 536
Eco47I GGWCC 1 cut(s) 690
Eco52I CGGCCG 2 cut(s) 71, 75
Eco57I CTGAAG 2 cut(s) 723, 1613
EcoRI GAATTC 1 cut(s) 758
EcoRII CCWGG 2 cut(s) 148, 1803
EcoT14I CCWWGG 2 cut(s) 554, 1852
EcoT22I ATGCAT 1 cut(s) 961
ErhI CCWWGG 2 cut(s) 554, 1852
Esp3I CGTCTC 1 cut(s) 306
FalI AAGNNNNNCTT 2 cut(s) 1677, 1709
FaqI GGGAC 4 cut(s) 419, 430, 445, 1786
FbaI TGATCA 3 cut(s) 205, 1368, 1566
Fnu4HI GCNGC 7 cut(s) 65, 68, 71, 858, 893, 1394, 1646
FokI GGATG 4 cut(s) 521, 665, 1389, 1654
FseI GGCCGGCC 1 cut(s) 77
Fsp4HI GCNGC 7 cut(s) 65, 68, 71, 858, 893, 1394, 1646
FspBI CTAG 5 cut(s) 84, 339, 555, 582, 1322
GlaI GCGC 1 cut(s) 240
GluI GCNGC 7 cut(s) 65, 68, 71, 858, 893, 1394, 1646
GsaI CCCAGC 2 cut(s) 726, 1211
HaeII RGCGCY 1 cut(s) 242
HaeIII GGCC 4 cut(s) 73, 77, 1589, 1722
HapII CCGG 4 cut(s) 74, 291, 303, 437
HhaI GCGC 1 cut(s) 241
Hin6I GCGC 1 cut(s) 239
HinP1I GCGC 1 cut(s) 239
HindIII AAGCTT 1 cut(s) 992
HinfI GANTC 4 cut(s) 80, 255, 1061, 1507
HpaII CCGG 4 cut(s) 74, 291, 303, 437
HphI GGTGA 1 cut(s) 787
Hpy166II GTNNAC 6 cut(s) 447, 918, 1382, 1534, 1613, 1615
Hpy188I TCNGA 7 cut(s) 205, 365, 764, 844, 1006, 1066, 1552
Hpy188III TCNNGA 5 cut(s) 214, 623, 809, 953, 1504
Hpy8I GTNNAC 6 cut(s) 447, 918, 1382, 1534, 1613, 1615
Hpy99I CGWCG 1 cut(s) 1172
HpyAV CCTTC 8 cut(s) 115, 141, 625, 703, 1236, 1322, 1712, 1810
HpyCH4III ACNGT 5 cut(s) 349, 482, 1543, 1556, 1700
HpyCH4IV ACGT 3 cut(s) 97, 1430, 1787
HpyF10VI GCNNNNNNNGC 7 cut(s) 14, 70, 269, 462, 497, 719, 1854
HpyF3I CTNAG 6 cut(s) 590, 1055, 1063, 1143, 1781, 1837
HpySE526I ACGT 3 cut(s) 97, 1430, 1787
HspAI GCGC 1 cut(s) 239
KroI GCCGGC 2 cut(s) 73, 302
KroNI GCCGGC 2 cut(s) 75, 304
Ksp22I TGATCA 3 cut(s) 205, 1368, 1566
Kzo9I GATC 9 cut(s) 54, 124, 205, 949, 1358, 1368, 1408, 1500, 1566
LmnI GCTCC 1 cut(s) 488
Lsp1109I GCAGC 5 cut(s) 76, 844, 904, 1405, 1657
LweI GCATC 4 cut(s) 259, 946, 968, 1632
MaeI CTAG 5 cut(s) 84, 339, 555, 582, 1322
MaeII ACGT 3 cut(s) 97, 1430, 1787
MaeIII GTNAC 5 cut(s) 40, 882, 902, 1058, 1624
MalI GATC 9 cut(s) 56, 126, 207, 951, 1360, 1370, 1410, 1502, 1568
MboI GATC 9 cut(s) 54, 124, 205, 949, 1358, 1368, 1408, 1500, 1566
MfeI CAATTG 3 cut(s) 264, 908, 966
MhlI GDGCHC 3 cut(s) 920, 1214, 1787
MlyI GAGTC 3 cut(s) 89, 1055, 1501
Mph1103I ATGCAT 1 cut(s) 961
MroNI GCCGGC 2 cut(s) 73, 302
MslI CAYNNNNRTG 3 cut(s) 36, 647, 733
MspA1I CMGCKG 2 cut(s) 67, 673
MspI CCGG 4 cut(s) 74, 291, 303, 437
MspR9I CCNGG 2 cut(s) 150, 1805
MunI CAATTG 3 cut(s) 264, 908, 966
MvaI CCWGG 2 cut(s) 150, 1805
MwoI GCNNNNNNNGC 7 cut(s) 14, 70, 269, 462, 497, 719, 1854
NaeI GCCGGC 2 cut(s) 75, 304
NcoI CCATGG 1 cut(s) 1852
NdeII GATC 9 cut(s) 54, 124, 205, 949, 1358, 1368, 1408, 1500, 1566
NgoMIV GCCGGC 2 cut(s) 73, 302
NlaIV GGNNCC 2 cut(s) 1213, 1849
NmeAIII GCCGAG 2 cut(s) 103, 239
NmuCI GTSAC 2 cut(s) 902, 1058
NsiI ATGCAT 1 cut(s) 961
NspI RCATGY 1 cut(s) 465
PacI TTAATTAA 1 cut(s) 1494
PaeI GCATGC 1 cut(s) 465
PceI AGGCCT 1 cut(s) 1722
PcsI WCGNNNNNNNCGW 1 cut(s) 1645
PdiI GCCGGC 2 cut(s) 75, 304
PfeI GAWTC 1 cut(s) 255
PkrI GCNGC 7 cut(s) 66, 69, 72, 859, 894, 1395, 1647
PleI GAGTC 3 cut(s) 88, 1055, 1501
PpsI GAGTC 3 cut(s) 88, 1055, 1501
PshBI ATTAAT 1 cut(s) 1490
Psp1406I AACGTT 1 cut(s) 1430
Psp6I CCWGG 2 cut(s) 148, 1803
PspFI CCCAGC 2 cut(s) 722, 1207
PspGI CCWGG 2 cut(s) 148, 1803
PspN4I GGNNCC 2 cut(s) 1213, 1849
PspPI GGNCC 2 cut(s) 690, 1588
PstI CTGCAG 1 cut(s) 862
PvuII CAGCTG 1 cut(s) 673
RigI GGCCGGCC 1 cut(s) 77
RsaI GTAC 7 cut(s) 446, 563, 975, 1253, 1383, 1558, 1614
RsaNI GTAC 7 cut(s) 445, 562, 974, 1252, 1382, 1557, 1613
RseI CAYNNNNRTG 3 cut(s) 36, 647, 733
SatI GCNGC 7 cut(s) 65, 68, 71, 858, 893, 1394, 1646
Sau3AI GATC 9 cut(s) 54, 124, 205, 949, 1358, 1368, 1408, 1500, 1566
Sau96I GGNCC 2 cut(s) 690, 1588
SchI GAGTC 3 cut(s) 89, 1055, 1501
ScrFI CCNGG 2 cut(s) 150, 1805
SduI GDGCHC 3 cut(s) 920, 1214, 1787
SfaNI GCATC 4 cut(s) 259, 946, 968, 1632
SfcI CTRYAG 1 cut(s) 858
SinI GGWCC 1 cut(s) 690
SmiMI CAYNNNNRTG 3 cut(s) 36, 647, 733
SmlI CTYRAG 2 cut(s) 533, 621
SmoI CTYRAG 2 cut(s) 533, 621
SphI GCATGC 1 cut(s) 465
SseBI AGGCCT 1 cut(s) 1722
SsiI CCGC 5 cut(s) 67, 70, 223, 306, 528
SspMI CTAG 5 cut(s) 84, 339, 555, 582, 1322
StuI AGGCCT 1 cut(s) 1722
StyD4I CCNGG 2 cut(s) 148, 1803
StyI CCWWGG 2 cut(s) 554, 1852
TaaI ACNGT 5 cut(s) 349, 482, 1543, 1556, 1700
TaiI ACGT 3 cut(s) 100, 1433, 1790
TaqI TCGA 4 cut(s) 139, 160, 213, 1170
TatI WGTACW 4 cut(s) 444, 561, 1381, 1612
TauI GCSGC 2 cut(s) 70, 73
TfiI GAWTC 1 cut(s) 255
TscAI CASTG 3 cut(s) 920, 1282, 1705
TseFI GTSAC 2 cut(s) 902, 1058
TseI GCWGC 5 cut(s) 64, 857, 892, 1393, 1645
Tsp45I GTSAC 2 cut(s) 902, 1058
TspGWI ACGGA 4 cut(s) 330, 1088, 1098, 1654
TspRI CASTG 3 cut(s) 920, 1282, 1705
VneI GTGCAC 1 cut(s) 916
VpaK11BI GGWCC 1 cut(s) 690
VspI ATTAAT 1 cut(s) 1490
XapI RAATTY 2 cut(s) 758, 1286
XceI RCATGY 1 cut(s) 465
XmaJI CCTAGG 1 cut(s) 554
XspI CTAG 5 cut(s) 84, 339, 555, 582, 1322
Zsp2I ATGCAT 1 cut(s) 961
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.