Rorug01G0408100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000268
Physical Location & Seq
Forward (+)
51428165 .. 51431316
3152 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0408100.1

Sequence Viewer

Length: 1491 bp
ATGAGCCGAACTCGAGCTATACTCCCATCCCAAACTCAAAAAATATTACCATCTTTTATTATTATTAACCATATTCTCCTTCTGCCACAGCGGATAGAACAGTTCCAAAGCTGGGAGGGACCAACCATAAAAACAGAGGAGATAAACCATTCTTTCACTCTCTCCCTCTCCGTAACAATGGCGGCGCTGCTAGAGCCACCGCCACCATTTCTAAACCCACTCCTTCCTCCGAGCTCAAACCCCACCCGCCCCCTTCCCCACAATCTCAAATTCAAAAGATTCAACCTTTCTAACAACCCCACCCTCCTCCTCACCCTCCATTCCCAACCCACCACTTGCTGCGCCGCCACTCCCCAACCAGAATTCCCCGACCCGACTTCCGAGCCGACCCGCGACCGCCGCCGAGCCGTCCGGCTGGCCTGGGAGAAGCTGGTCCGGTGGTCCCGGTCGTTGCGCTCCAAGAACAAGACAGATGTTCTTGAACGCACTAACAAGGTGGTGGTGCTCGGAGGTGGGTCTTTTGCGACGGCGATGGCGGCCCACGTTGCAAATAGAAAGGATCAGATGGAAGTTAACATGCTGGTGCGTGATGCTCAAGTTTGTCGGTCTATTAATGAGAACCATTATAATGGTAAGTACTTCCCAGAACATAAGCTACCGGAGAATGTGATTGCAACCACTGATGCCAAAGCTGCTTTGCTTAATGCTGACTATTGCCTCCATGCAGTCCCTGTGCAGTTCAGCGCATCGTTTCTTGAGGGAATTGCGGAATATGTATATCCAGAGTTGCCGTTCATATCTGTTAGCAAGGGTTTGGAGCTCAATACATTGAGGACAATGTCTCAGATCATCCCCCAAGCATTGAAGAATCCTCGCCAGCCTTTCATAGCGCTATCAGGGCCTTCTTTTGCTCTGGAGCTGATGAACAAATTACCAACAGCGATGGTGGTAGCGTCAAAAGACAAAAAATTGGCTAATGCAGTTCAGCAGTTACTAGCTTCTAGCTATCTAAGAATCAGCACTTCAAGTGATGTCACAGGGGTAGAAGTTACAGGTGCTCTCAAGAATGTGCTTGCAATAGCCGCAGGTATTGTGGATGGGATGAATCTTGGTAATAATTCTAAGGCCGCTCTTGTTTCACAGGGATGCTCAGAGATAAGATGGCTGGCAACTAAGATGGGTGCGAAGCCGACAACAATCACTGGTCTATCTGGAATTGGAGATATTATGCTTACATGTTTTGTAAACCTTTCTAGAAACAGAACAGTTGGGGTTCGTCTTGGATCAGGGGAGAAACTTGATGACATACTTGGTTCCATGAATCAGGTGGCAGAAGGTGTATCGACAGCAGGAGCAGTGATTGCGCTAGCGCAGAAATATAACGTCAAGATGCCAGTTTTGACTGCAGTAGCTCGGATTATTGACAATGAACTGACCCCCAAGAAAGCTGTTTTCGAGCTGATGAGCCTCCCTCAGGTTGAAGAAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

496

Amino Acids

54.2

Weight (kDa)

9.39

Isoelectric Point (pI)

47.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_Gly3P_dh_N PF01210 165 - 324 8.1e-40 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
NAD_Gly3P_dh_C PF07479 344 - 484 1.2e-51 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
GPD_NAD_C_bact PF20618 404 - 470 8.6e-22 Bacterial GPD, NAD-dependent C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000268)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g23642 FvH4_2g09911 FvH4_2g09911 FvH4_2g09911 FvH4_3g18421 FvH4_4g05321 FvH4_6g28332 FvH4_7g31231
prunus_persica Prupe.2G063700_v2.0.a1 Prupe.5G238300_v2.0.a1 Prupe.6G153700_v2.0.a1 Prupe.7G017400_v2.0.a1 Prupe.7G070100_v2.0.a1 Prupe.7G070100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0345471 RchiOBHm_Chr1g0366901 RchiOBHm_Chr2g0162601 RchiOBHm_Chr6g0266661 RchiOBHm_Chr6g0266671
rosa_laevigata RLG00000005047 RLG00000007971 RLG00000008530 RLG00000009009 RLG00000009046 RLG00000014086 RLG00000017162 RLG00000017163 RLG00000017440 RLG00000019098 RLG00000022623 RLG00000024566 RLG00000027733 RLG00000029878 RLG00000029945 RLG00000030127 RLG00000030157 RLG00000031078 RLG00000031080 RLG00000034338 RLG00000034670
rosa_multiflora Rmu_sc0002106.1_g000007 Rmu_sc0002531.1_g000064 Rmu_sc0003433.1_g000005 Rmu_sc0004704.1_g000001 Rmu_sc0004704.1_g000002 Rmu_sc0004888.1_g000042 Rmu_sc0005599.1_g000031 Rmu_sc0006413.1_g000014 Rmu_sc0006413.1_g000018
rosa_roxburghii Rroxscaffold_1G00031940 Rroxscaffold_1G00032500 Rroxscaffold_1G00074770 Rroxscaffold_1G00074780 Rroxscaffold_1G00075150 Rroxscaffold_2G00125060 Rroxscaffold_2G00125070 Rroxscaffold_2G00125800 Rroxscaffold_2G00125820 Rroxscaffold_2G00139560 Rroxscaffold_2G00140550 Rroxscaffold_4G00314090 Rroxscaffold_6G00390050 Rroxscaffold_6G00390520 Rroxscaffold_6G00390530 Rroxscaffold_6G00428030 Rroxscaffold_7G00201570 Rroxscaffold_7G00201580 Rroxscaffold_7G00207070 Rroxscaffold_7G00207080 Rroxscaffold_7G00207240
rosa_rugosa Rorug01G0408000 Rorug01G0408100 Rorug01G0408100 Rorug01G0408200 Rorug02G0155200 Rorug02G0181500 Rorug02G0288400 Rorug03G0208600 Rorug03G0272300 Rorug06G0005500 Rorug06G0005600 Rorug06G0026300.1 Rorug06G0026400 Rorug06G0026500 Rorug06G0026600 Rorug06G0026600 Rorug06G0026600 Rorug06G0145800 Rorug07G0305200
rosa_samantha Rh1AG062100 Rh1BG131900 Rh1BG157000 Rh1CG021100 Rh1CG321600 Rh1DG188200 Rh2DG388300 Rh3AG320500 Rh3BG355400 Rh3CG352400 Rh3CG353200 Rh4AG045800 Rh4DG171700 Rh5AG196000 Rh5AG196100 Rh5CG346800 Rh6BG147600 Rh6BG147700 Rh6CG143200 Rh6CG143500 Rh6CG174600 Rh6CG391800 Rh6DG132100 Rh6DG132300 Rh6DG167100 Rh6DG167200 Rh7AG211600 Rh7BG307000 Rh7BG307300 Rh7BG398300
rosa_wichuraiana Rw0G001830 Rw0G001840 Rw0G018160 Rw0G018170 Rw3G028040 Rw5G017860 Rw5G026710 Rw6G012630 Rw6G012650 Rw6G012780 Rw6G012800 Rw7G019130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 627
Acc36I ACCTGC 1 cut(s) 1076
AccBSI CCGCTC 1 cut(s) 1130
AccII CGCG 1 cut(s) 393
AclWI GGATC 2 cut(s) 567, 1291
AcsI RAATTY 2 cut(s) 269, 362
AfaI GTAC 1 cut(s) 638
AfeI AGCGCT 1 cut(s) 891
AfiI CCNNNNNNNGG 2 cut(s) 112, 1474
AflIII ACRYGT 1 cut(s) 1235
AgsI TTSAA 6 cut(s) 274, 283, 482, 865, 1026, 1481
AjnI CCWGG 1 cut(s) 419
Alw21I GWGCWC 4 cut(s) 236, 507, 822, 1060
Alw26I GTCTC 1 cut(s) 846
AlwI GGATC 2 cut(s) 567, 1291
AlwNI CAGNNNCTG 1 cut(s) 731
Ama87I CYCGRG 1 cut(s) 12
Aor51HI AGCGCT 1 cut(s) 891
AoxI GGCC 4 cut(s) 417, 537, 899, 1125
ApeKI GCWGC 3 cut(s) 187, 339, 692
ApoI RAATTY 2 cut(s) 269, 362
AseI ATTAAT 1 cut(s) 612
AspLEI GCGC 7 cut(s) 187, 344, 456, 746, 892, 1366, 1372
AspS9I GGNCC 5 cut(s) 119, 433, 441, 538, 899
AsuC2I CCSGG 1 cut(s) 445
AsuHPI GGTGA 1 cut(s) 304
AsuNHI GCTAGC 1 cut(s) 1366
AvaI CYCGRG 1 cut(s) 12
AvaII GGWCC 3 cut(s) 119, 433, 441
AxyI CCTNAGG 1 cut(s) 1473
BanII GRGCYC 2 cut(s) 236, 822
Bbv12I GWGCWC 4 cut(s) 236, 507, 822, 1060
BbvI GCAGC 3 cut(s) 174, 326, 679
BccI CCATC 8 cut(s) 34, 58, 526, 559, 937, 1091, 1155, 1171
BceAI ACGGC 3 cut(s) 392, 543, 775
BciT130I CCWGG 1 cut(s) 421
BcnI CCSGG 1 cut(s) 445
BcoDI GTCTC 1 cut(s) 846
BfaI CTAG 5 cut(s) 191, 995, 1002, 1254, 1367
BfmI CTRYAG 1 cut(s) 1404
BfoI RGCGCY 2 cut(s) 188, 893
BfuAI ACCTGC 1 cut(s) 1076
BisI GCNGC 9 cut(s) 183, 188, 340, 345, 400, 537, 693, 1083, 1128
BlsI GCNGC 9 cut(s) 184, 189, 341, 346, 401, 538, 694, 1084, 1129
BmcAI AGTACT 1 cut(s) 638
Bme1390I CCNGG 2 cut(s) 421, 445
Bme18I GGWCC 3 cut(s) 119, 433, 441
BmeT110I CYCGRG 1 cut(s) 12
BmgT120I GGNCC 5 cut(s) 119, 433, 441, 538, 899
BmiI GGNNCC 3 cut(s) 120, 443, 1315
BmrFI CCNGG 2 cut(s) 421, 445
BmsI GCATC 5 cut(s) 580, 673, 755, 1136, 1380
BmtI GCTAGC 1 cut(s) 1370
BplI GAGNNNNNCTC 4 cut(s) 27, 38, 1456, 1488
BpmI CTGGAG 1 cut(s) 935
BpuEI CTTGAG 3 cut(s) 579, 776, 1046
BpuMI CCSGG 1 cut(s) 445
BsaJI CCNNGG 1 cut(s) 420
BsaWI WCCGGW 2 cut(s) 435, 658
Bsc4I CCNNNNNNNGG 2 cut(s) 112, 1474
Bse1I ACTGG 2 cut(s) 1207, 1394
Bse21I CCTNAGG 1 cut(s) 1473
BseBI CCWGG 1 cut(s) 421
BseDI CCNNGG 1 cut(s) 420
BseGI GGATG 5 cut(s) 26, 849, 1102, 1107, 1151
BseLI CCNNNNNNNGG 2 cut(s) 112, 1474
BseMII CTCAG 3 cut(s) 857, 1164, 1487
BseNI ACTGG 2 cut(s) 1207, 1394
BseRI GAGGAG 3 cut(s) 152, 296, 299
BseXI GCAGC 3 cut(s) 174, 326, 679
BseYI CCCAGC 1 cut(s) 111
BsgI GTGCAG 1 cut(s) 755
Bsh1236I CGCG 1 cut(s) 393
Bsh1285I CGRYCG 2 cut(s) 397, 449
BshFI GGCC 4 cut(s) 419, 539, 901, 1127
BsiEI CGRYCG 2 cut(s) 397, 449
BsiHKAI GWGCWC 4 cut(s) 236, 507, 822, 1060
BsiHKCI CYCGRG 1 cut(s) 12
BsiSI CCGG 4 cut(s) 412, 436, 445, 659
BslFI GGGAC 3 cut(s) 132, 427, 713
BslI CCNNNNNNNGG 2 cut(s) 112, 1474
BsmAI GTCTC 1 cut(s) 846
BsmFI GGGAC 3 cut(s) 132, 427, 713
BsnI GGCC 4 cut(s) 419, 539, 901, 1127
BsoBI CYCGRG 1 cut(s) 12
Bsp1286I GDGCHC 4 cut(s) 236, 507, 822, 1060
Bsp143I GATC 3 cut(s) 559, 846, 1283
BspANI GGCC 4 cut(s) 419, 539, 901, 1127
BspCNI CTCAG 3 cut(s) 856, 1163, 1486
BspFNI CGCG 1 cut(s) 393
BspLI GGNNCC 3 cut(s) 120, 443, 1315
BspMAI CTGCAG 1 cut(s) 1408
BspMI ACCTGC 1 cut(s) 1076
BspOI GCTAGC 1 cut(s) 1370
BspPI GGATC 2 cut(s) 567, 1291
BsrBI CCGCTC 1 cut(s) 1130
BsrI ACTGG 2 cut(s) 1207, 1394
BssECI CCNNGG 1 cut(s) 420
BssMI GATC 3 cut(s) 559, 846, 1283
Bst2UI CCWGG 1 cut(s) 421
Bst4CI ACNGT 2 cut(s) 102, 1267
BstAPI GCANNNNNTGC 1 cut(s) 1361
BstC8I GCNNGC 5 cut(s) 417, 878, 1074, 1167, 1368
BstDEI CTNAG 6 cut(s) 843, 1010, 1122, 1150, 1173, 1473
BstENI CCTNNNNNAGG 1 cut(s) 1472
BstF5I GGATG 5 cut(s) 26, 849, 1102, 1107, 1151
BstFNI CGCG 1 cut(s) 393
BstH2I RGCGCY 2 cut(s) 188, 893
BstHHI GCGC 7 cut(s) 187, 344, 456, 746, 892, 1366, 1372
BstKTI GATC 3 cut(s) 562, 849, 1286
BstMAI GTCTC 1 cut(s) 846
BstMBI GATC 3 cut(s) 559, 846, 1283
BstMCI CGRYCG 2 cut(s) 397, 449
BstMWI GCNNNNNNNGC 8 cut(s) 193, 399, 536, 545, 692, 898, 1082, 1361
BstNI CCWGG 1 cut(s) 421
BstNSI RCATGY 2 cut(s) 580, 1239
BstSCI CCNGG 2 cut(s) 419, 443
BstSFI CTRYAG 1 cut(s) 1404
BstUI CGCG 1 cut(s) 393
BstV1I GCAGC 3 cut(s) 174, 326, 679
BstXI CCANNNNNNTGG 1 cut(s) 629
Bsu36I CCTNAGG 1 cut(s) 1473
BsuRI GGCC 4 cut(s) 419, 539, 901, 1127
BtgZI GCGATG 2 cut(s) 545, 956
BtsCI GGATG 5 cut(s) 26, 849, 1102, 1107, 1151
BtsI GCAGTG 1 cut(s) 1362
BtsIMutI CAGTG 3 cut(s) 678, 1200, 1362
BveI ACCTGC 1 cut(s) 1076
Cac8I GCNNGC 5 cut(s) 417, 878, 1074, 1167, 1368
CaiI CAGNNNCTG 1 cut(s) 731
CfoI GCGC 7 cut(s) 187, 344, 456, 746, 892, 1366, 1372
Cfr13I GGNCC 5 cut(s) 119, 433, 441, 538, 899
CseI GACGC 1 cut(s) 942
Csp6I GTAC 1 cut(s) 637
CviAII CATG 4 cut(s) 577, 722, 1236, 1318
CviQI GTAC 1 cut(s) 637
DdeI CTNAG 6 cut(s) 843, 1010, 1122, 1150, 1173, 1473
DpnI GATC 3 cut(s) 561, 848, 1285
DpnII GATC 3 cut(s) 559, 846, 1283
Ecl136II GAGCTC 2 cut(s) 234, 820
Eco24I GRGCYC 2 cut(s) 236, 822
Eco47I GGWCC 3 cut(s) 119, 433, 441
Eco47III AGCGCT 1 cut(s) 891
Eco53kI GAGCTC 2 cut(s) 234, 820
Eco81I CCTNAGG 1 cut(s) 1473
Eco88I CYCGRG 1 cut(s) 12
EcoICRI GAGCTC 2 cut(s) 234, 820
EcoNI CCTNNNNNAGG 1 cut(s) 1472
EcoO109I RGGNCCY 1 cut(s) 899
EcoRI GAATTC 1 cut(s) 362
EcoRII CCWGG 1 cut(s) 419
EcoT38I GRGCYC 2 cut(s) 236, 822
FaeI CATG 4 cut(s) 580, 725, 1239, 1321
FaqI GGGAC 3 cut(s) 132, 427, 713
FatI CATG 4 cut(s) 576, 721, 1235, 1317
FauI CCCGC 2 cut(s) 254, 398
Fnu4HI GCNGC 9 cut(s) 183, 188, 340, 345, 400, 537, 693, 1083, 1128
FokI GGATG 5 cut(s) 13, 836, 1109, 1114, 1158
FriOI GRGCYC 2 cut(s) 236, 822
Fsp4HI GCNGC 9 cut(s) 183, 188, 340, 345, 400, 537, 693, 1083, 1128
FspBI CTAG 5 cut(s) 191, 995, 1002, 1254, 1367
GlaI GCGC 7 cut(s) 186, 343, 455, 745, 891, 1365, 1371
GluI GCNGC 9 cut(s) 183, 188, 340, 345, 400, 537, 693, 1083, 1128
GsaI CCCAGC 1 cut(s) 115
GsuI CTGGAG 1 cut(s) 935
HaeII RGCGCY 2 cut(s) 188, 893
HaeIII GGCC 4 cut(s) 419, 539, 901, 1127
HapII CCGG 4 cut(s) 412, 436, 445, 659
HgaI GACGC 1 cut(s) 942
HhaI GCGC 7 cut(s) 187, 344, 456, 746, 892, 1366, 1372
Hin1II CATG 4 cut(s) 580, 725, 1239, 1321
Hin6I GCGC 7 cut(s) 185, 342, 454, 744, 890, 1364, 1370
HinP1I GCGC 7 cut(s) 185, 342, 454, 744, 890, 1364, 1370
HincII GTYRAC 1 cut(s) 574
HindII GTYRAC 1 cut(s) 574
HinfI GANTC 5 cut(s) 279, 868, 1014, 1105, 1321
HpaI GTTAAC 1 cut(s) 574
HpaII CCGG 4 cut(s) 412, 436, 445, 659
HphI GGTGA 1 cut(s) 304
Hpy166II GTNNAC 2 cut(s) 574, 1246
Hpy188I TCNGA 8 cut(s) 231, 382, 509, 564, 846, 1153, 1416, 1490
Hpy188III TCNNGA 8 cut(s) 479, 755, 782, 914, 1063, 1212, 1254, 1387
Hpy8I GTNNAC 2 cut(s) 574, 1246
Hpy99I CGWCG 1 cut(s) 529
HpyAV CCTTC 5 cut(s) 89, 233, 263, 912, 1328
HpyCH4III ACNGT 2 cut(s) 102, 1267
HpyCH4IV ACGT 2 cut(s) 543, 1383
HpyCH4V TGCA 7 cut(s) 548, 674, 725, 736, 980, 1076, 1406
HpyF10VI GCNNNNNNNGC 8 cut(s) 193, 399, 536, 545, 692, 898, 1082, 1361
HpyF3I CTNAG 6 cut(s) 843, 1010, 1122, 1150, 1173, 1473
HpySE526I ACGT 2 cut(s) 543, 1383
Hsp92II CATG 4 cut(s) 580, 725, 1239, 1321
HspAI GCGC 7 cut(s) 185, 342, 454, 744, 890, 1364, 1370
KspAI GTTAAC 1 cut(s) 574
Kzo9I GATC 3 cut(s) 559, 846, 1283
LmnI GCTCC 4 cut(s) 461, 817, 916, 1352
Lsp1109I GCAGC 3 cut(s) 174, 326, 679
LweI GCATC 5 cut(s) 580, 673, 755, 1136, 1380
MaeI CTAG 5 cut(s) 191, 995, 1002, 1254, 1367
MaeII ACGT 2 cut(s) 543, 1383
MaeIII GTNAC 4 cut(s) 172, 990, 1033, 1048
MalI GATC 3 cut(s) 561, 848, 1285
MbiI CCGCTC 1 cut(s) 1130
MboI GATC 3 cut(s) 559, 846, 1283
MboII GAAGA 1 cut(s) 877
MhlI GDGCHC 4 cut(s) 236, 507, 822, 1060
MluCI AATT 7 cut(s) 269, 362, 762, 929, 968, 1117, 1215
MseI TTAA 4 cut(s) 66, 573, 612, 702
MslI CAYNNNNRTG 3 cut(s) 581, 627, 1144
MspA1I CMGCKG 1 cut(s) 91
MspI CCGG 4 cut(s) 412, 436, 445, 659
MspR9I CCNGG 2 cut(s) 421, 445
MvaI CCWGG 1 cut(s) 421
MvnI CGCG 1 cut(s) 393
MwoI GCNNNNNNNGC 8 cut(s) 193, 399, 536, 545, 692, 898, 1082, 1361
NciI CCSGG 1 cut(s) 445
NdeII GATC 3 cut(s) 559, 846, 1283
NheI GCTAGC 1 cut(s) 1366
NlaIII CATG 4 cut(s) 580, 725, 1239, 1321
NlaIV GGNNCC 3 cut(s) 120, 443, 1315
NmeAIII GCCGAG 1 cut(s) 428
NmuCI GTSAC 1 cut(s) 1033
NspI RCATGY 2 cut(s) 580, 1239
PaeR7I CTCGAG 1 cut(s) 12
PciI ACATGT 1 cut(s) 1235
PfeI GAWTC 5 cut(s) 279, 868, 1014, 1105, 1321
PflFI GACNNNGTC 1 cut(s) 838
PkrI GCNGC 9 cut(s) 184, 189, 341, 346, 401, 538, 694, 1084, 1129
PscI ACATGT 1 cut(s) 1235
PshBI ATTAAT 1 cut(s) 612
PsiI TTATAA 1 cut(s) 627
Psp124BI GAGCTC 2 cut(s) 236, 822
Psp6I CCWGG 1 cut(s) 419
PspFI CCCAGC 1 cut(s) 111
PspGI CCWGG 1 cut(s) 419
PspN4I GGNNCC 3 cut(s) 120, 443, 1315
PspPI GGNCC 5 cut(s) 119, 433, 441, 538, 899
PspXI VCTCGAGB 1 cut(s) 12
PsrI GAACNNNNNNTAC 2 cut(s) 639, 671
PstI CTGCAG 1 cut(s) 1408
PstNI CAGNNNCTG 1 cut(s) 731
PsyI GACNNNGTC 1 cut(s) 838
RsaI GTAC 1 cut(s) 638
RsaNI GTAC 1 cut(s) 637
RseI CAYNNNNRTG 3 cut(s) 581, 627, 1144
SacI GAGCTC 2 cut(s) 236, 822
SaqAI TTAA 4 cut(s) 66, 573, 612, 702
SatI GCNGC 9 cut(s) 183, 188, 340, 345, 400, 537, 693, 1083, 1128
Sau3AI GATC 3 cut(s) 559, 846, 1283
Sau96I GGNCC 5 cut(s) 119, 433, 441, 538, 899
ScaI AGTACT 1 cut(s) 638
ScrFI CCNGG 2 cut(s) 421, 445
SduI GDGCHC 4 cut(s) 236, 507, 822, 1060
SfaNI GCATC 5 cut(s) 580, 673, 755, 1136, 1380
SfcI CTRYAG 1 cut(s) 1404
Sfr274I CTCGAG 1 cut(s) 12
SinI GGWCC 3 cut(s) 119, 433, 441
SlaI CTCGAG 1 cut(s) 12
SmiMI CAYNNNNRTG 3 cut(s) 581, 627, 1144
SmlI CTYRAG 4 cut(s) 12, 594, 755, 1061
SmoI CTYRAG 4 cut(s) 12, 594, 755, 1061
Sse9I AATT 7 cut(s) 269, 362, 762, 929, 968, 1117, 1215
SspI AATATT 1 cut(s) 45
SspMI CTAG 5 cut(s) 191, 995, 1002, 1254, 1367
SstI GAGCTC 2 cut(s) 236, 822
StyD4I CCNGG 2 cut(s) 419, 443
TaaI ACNGT 2 cut(s) 102, 1267
TaiI ACGT 2 cut(s) 546, 1386
TaqI TCGA 3 cut(s) 13, 1343, 1455
TaqII GACCGA 1 cut(s) 594
TasI AATT 7 cut(s) 269, 362, 762, 929, 968, 1117, 1215
TatI WGTACW 1 cut(s) 636
TauI GCSGC 6 cut(s) 185, 347, 402, 539, 1085, 1130
TfiI GAWTC 5 cut(s) 279, 868, 1014, 1105, 1321
Tru1I TTAA 4 cut(s) 66, 573, 612, 702
Tru9I TTAA 4 cut(s) 66, 573, 612, 702
TscAI CASTG 3 cut(s) 685, 1207, 1362
TseFI GTSAC 1 cut(s) 1033
TseI GCWGC 3 cut(s) 187, 339, 692
Tsp45I GTSAC 1 cut(s) 1033
TspDTI ATGAA 6 cut(s) 784, 874, 938, 1118, 1334, 1443
TspGWI ACGGA 1 cut(s) 160
TspRI CASTG 3 cut(s) 685, 1207, 1362
Tth111I GACNNNGTC 1 cut(s) 838
VpaK11BI GGWCC 3 cut(s) 119, 433, 441
VspI ATTAAT 1 cut(s) 612
XagI CCTNNNNNAGG 1 cut(s) 1472
XapI RAATTY 2 cut(s) 269, 362
XbaI TCTAGA 1 cut(s) 1253
XceI RCATGY 2 cut(s) 580, 1239
XcmI CCANNNNNNNNNTGG 1 cut(s) 1324
XhoI CTCGAG 1 cut(s) 12
XspI CTAG 5 cut(s) 191, 995, 1002, 1254, 1367
ZrmI AGTACT 1 cut(s) 638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.