AT2G02240

F-box protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
592160 .. 593724
1565 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G02240.1

Sequence Viewer

Length: 963 bp
ATGTGTGGACAACATTACACGTCTATTATTTCCTCTATTACAACAGAAGCGAGTTTTGAAAGAGTCAGAACTCACGAGTTTATCAAGTTTTCGAAACACAAACGATTTGATCAAAGGCACCGATCGATGATGGGGCAATATCATAGCGGTGGAGAGATCGTTTCTCCGGGGACGTCACCTTTTGATGTCTTGCCGGAGGATTGCATCTCCAACATAATCTCTTTCACAAGTCCACGAGATGCGTGCGTTGCTGCATCGGTTTCCAAAACCTTTGAATCAGCTGTTAGTTCCGATTGCGTATGGGACAAGTTTCTTCCACCGGAGTATGAATCTTTGGTTTCTCGATCTCGAGTTTTTGCATCGAAGAAGGAACTTTATTTCGCTCTCTGCCACAATCCTGTTCTAATCGAAGATGGCAAAAAGAGCTTTTGGTTAGAAAAAGCGAGTGGAAAAAGGTGTATCATGTTATCTTCAAAGGAACTTTGGATCACATGGGGAAGTAGTCCTGAATATTGGCAATGGATTTCAATTCCTGAATCTAGATTCAACAAAATAGCAGAGCTTCTTGATGTGTGTTGGTTTGAGATTCGTGGCAAGACAAGCGCTCGTGTGCTATCTCCTGGAACTCGTTACTCGGCTTACATTGTGTTCAAGACGAAAGATCGATGTCCTGGATTAGGGCATTTGCCGGTAGAAGTTGGACTTGGTTTAGTGGGACAAGAATCTTCTAAAAGATTCATATATTTCATAGGGCCTAGGGATCGAAGGGGAAGGAGGGAAACGAGAGATGTAACAAAACCAGATCAAAGAGAAGATGGGTGGATGGAAGCTGAGCTTGGTGAATTCTTCAATGAAGAAAGGTGTGATGAAATTGAGTTTAGTGTTATTGAGATTAAGTCCCCTTCTTGGAAGAGTGGTTTGATCATTCAAGGAATCGAATTCCGCCCTACGAAAAGCCAGTAA

Protein Analysis

320

Amino Acids

36.72

Weight (kDa)

8.02

Isoelectric Point (pI)

59.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 62 - 103 4.6e-06 F-box-like
F-box PF00646 64 - 102 8.1e-08 F-box domain
PP2 PF14299 151 - 316 3.1e-59 Phloem protein 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000189)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G80110 AT2G02240 AT2G02250 AT2G02280 AT2G02300 AT2G02310 AT2G02320 AT2G02340 AT2G02350 AT2G02350 AT2G02360
fragaria_vesca FvH4_1g04390 FvH4_4g27460 FvH4_6g01013 FvH4_6g01014 FvH4_6g01020 FvH4_6g01030 FvH4_6g01090 FvH4_6g01090 FvH4_6g01110
malus_domestica MD04G1236300.v1.1 MD04G1237000.v1.1 MD04G1237100.v1.1 MD04G1237300.v1.1 MD04G1237400.v1.1 MD04G1237600.v1.1 MD04G1237700.v1.1 MD04G1239300.v1.1 MD12G1255400.v1.1 MD12G1255500.v1.1 MD12G1255600.v1.1
prunus_persica Prupe.6G356300_v2.0.a1
pyrus_communis pycom04g21010 pycom04g21080 pycom04g21090 pycom12g23410 pycom12g23420 pycom12g23470
rosa_chinensis RchiOBHm_Chr2g0090041 RchiOBHm_Chr2g0105801 RchiOBHm_Chr2g0168101 RchiOBHm_Chr2g0168151 RchiOBHm_Chr3g0448461 RchiOBHm_Chr3g0448471 RchiOBHm_Chr3g0448501 RchiOBHm_Chr3g0448511 RchiOBHm_Chr3g0448521 RchiOBHm_Chr3g0448621 RchiOBHm_Chr3g0450261 RchiOBHm_Chr3g0450281 RchiOBHm_Chr6g0255241
rosa_laevigata RLG00000014851 RLG00000016080 RLG00000017458 RLG00000023974 RLG00000025742 RLG00000025744 RLG00000025883 RLG00000025900 RLG00000025901 RLG00000025903 RLG00000025904
rosa_multiflora Rmu_co8313739.1_g000001 Rmu_co8361343.1_g000001 Rmu_co8363919.1_g000001 Rmu_co8385575.1_g000001 Rmu_co8448943.1_g000001 Rmu_sc0000082.1_g000049 Rmu_sc0002741.1_g000008 Rmu_sc0003116.1_g000039 Rmu_sc0003308.1_g000013 Rmu_sc0005298.1_g000006 Rmu_sc0005298.1_g000008 Rmu_sc0007766.1_g000003 Rmu_sc0011979.1_g000006 Rmu_sc0016252.1_g000001 Rmu_sc0023110.1_g000001 Rmu_sc0023110.1_g000002 Rmu_sc0023110.1_g000003 Rmu_sc0041893.1_g000001
rosa_roxburghii Rroxscaffold_2G00137910 Rroxscaffold_2G00151450 Rroxscaffold_6G00426700 Rroxscaffold_6G00426730 Rroxscaffold_6G00426740 Rroxscaffold_6G00426750 Rroxscaffold_6G00426760 Rroxscaffold_6G00426910 Rroxscaffold_6G00428000 Rroxscaffold_6G00428010
rosa_rugosa Rorug02G0004900 Rorug02G0130400 Rorug02G0130400 Rorug02G0612700 Rorug02G0612900 Rorug02G0613000 Rorug02G0613100 Rorug02G0613100 Rorug02G0614700 Rorug02G0614800 Rorug02G0614900 Rorug02G0626500
rosa_samantha Rh2BG049100 Rh2BG190800 Rh2BG613500 Rh2BG613800 Rh2CG051300 Rh2DG050700 Rh2DG187600 Rh2DG187700 Rh2DG402600 Rh3AG012100 Rh3AG012200 Rh3AG012300 Rh3AG012500 Rh3AG012600 Rh3AG012700 Rh3AG012800 Rh3AG013700 Rh3AG025900 Rh3AG026200 Rh3AG026500 Rh3AG026700 Rh3BG011900 Rh3BG012000 Rh3BG012100 Rh3BG012200 Rh3BG012300 Rh3BG013500 Rh3BG026600 Rh3BG026800 Rh3BG027200 Rh3BG027400 Rh3DG012300 Rh3DG012400 Rh3DG012500 Rh3DG012600 Rh3DG012700 Rh3DG012800 Rh3DG012900 Rh3DG014300 Rh3DG026500 Rh3DG026800 Rh3DG027100 Rh3DG027200 Rh3DG122000 Rh3DG282500 Rh5BG266700 Rh6BG370500 Rh7CG395700
rosa_wichuraiana Rw0G020400 Rw2G004010 Rw2G014220 Rw3G000940 Rw3G000950 Rw3G000960 Rw3G001010 Rw3G002090 Rw3G002100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 176
AccB1I GGYRCC 1 cut(s) 117
AciI CCGC 2 cut(s) 147, 943
AclWI GGATC 2 cut(s) 494, 768
AcsI RAATTY 2 cut(s) 842, 938
AcyI GRCGYC 1 cut(s) 173
AfeI AGCGCT 1 cut(s) 604
AfiI CCNNNNNNNGG 2 cut(s) 677, 906
AflIII ACRYGT 1 cut(s) 18
AgsI TTSAA 8 cut(s) 59, 275, 474, 528, 547, 652, 850, 929
AjiI CACGTC 1 cut(s) 21
AjnI CCWGG 2 cut(s) 619, 670
AjuI GAANNNNNNNTTGG 4 cut(s) 687, 719, 819, 851
AluBI AGCT 5 cut(s) 281, 426, 562, 830, 835
AluI AGCT 5 cut(s) 281, 426, 562, 830, 835
AlwI GGATC 2 cut(s) 494, 768
Ama87I CYCGRG 1 cut(s) 348
Aor51HI AGCGCT 1 cut(s) 604
AoxI GGCC 1 cut(s) 752
ApeKI GCWGC 1 cut(s) 251
ApoI RAATTY 2 cut(s) 842, 938
AspA2I CCTAGG 1 cut(s) 755
AspLEI GCGC 1 cut(s) 605
AspS9I GGNCC 1 cut(s) 752
AsuC2I CCSGG 1 cut(s) 168
AsuHPI GGTGA 2 cut(s) 168, 851
AsuII TTCGAA 1 cut(s) 92
AvaI CYCGRG 1 cut(s) 348
AvrII CCTAGG 1 cut(s) 755
BanI GGYRCC 1 cut(s) 117
BauI CACGAG 3 cut(s) 74, 234, 606
BbvI GCAGC 1 cut(s) 238
BccI CCATC 4 cut(s) 124, 407, 809, 817
BcgI CGANNNNNNTGC 2 cut(s) 225, 259
BciT130I CCWGG 2 cut(s) 621, 672
BclI TGATCA 2 cut(s) 109, 921
BcnI CCSGG 1 cut(s) 168
BfaI CTAG 2 cut(s) 540, 756
BfoI RGCGCY 1 cut(s) 606
BisI GCNGC 1 cut(s) 252
BlnI CCTAGG 1 cut(s) 755
BlpI GCTNAGC 1 cut(s) 831
BlsI GCNGC 1 cut(s) 253
Bme1390I CCNGG 3 cut(s) 168, 621, 672
BmeT110I CYCGRG 1 cut(s) 348
BmgBI CACGTC 1 cut(s) 21
BmgT120I GGNCC 1 cut(s) 752
BmiI GGNNCC 1 cut(s) 119
BmrFI CCNGG 3 cut(s) 168, 621, 672
BmsI GCATC 4 cut(s) 213, 229, 263, 368
Bpu1102I GCTNAGC 1 cut(s) 831
Bpu14I TTCGAA 1 cut(s) 92
BpuMI CCSGG 1 cut(s) 168
Bsa29I ATCGAT 2 cut(s) 125, 664
BsaHI GRCGYC 1 cut(s) 173
BsaJI CCNNGG 2 cut(s) 167, 755
BsaWI WCCGGW 1 cut(s) 319
BsaXI ACNNNNNCTCC 2 cut(s) 144, 174
Bsc4I CCNNNNNNNGG 2 cut(s) 677, 906
Bse118I RCCGGY 1 cut(s) 688
Bse1I ACTGG 1 cut(s) 958
Bse3DI GCAATG 1 cut(s) 524
BseBI CCWGG 2 cut(s) 621, 672
BseCI ATCGAT 2 cut(s) 125, 664
BseDI CCNNGG 2 cut(s) 167, 755
BseGI GGATG 1 cut(s) 828
BseLI CCNNNNNNNGG 2 cut(s) 677, 906
BseMI GCAATG 1 cut(s) 524
BseMII CTCAG 1 cut(s) 822
BseNI ACTGG 1 cut(s) 958
BseXI GCAGC 1 cut(s) 238
Bsh1285I CGRYCG 1 cut(s) 125
BshFI GGCC 1 cut(s) 754
BshNI GGYRCC 1 cut(s) 117
BshVI ATCGAT 2 cut(s) 125, 664
BsiEI CGRYCG 1 cut(s) 125
BsiHKCI CYCGRG 1 cut(s) 348
BsiSI CCGG 4 cut(s) 167, 194, 320, 689
BslFI GGGAC 4 cut(s) 184, 317, 729, 883
BslI CCNNNNNNNGG 2 cut(s) 677, 906
BsmFI GGGAC 4 cut(s) 184, 317, 729, 883
BsnI GGCC 1 cut(s) 754
BsoBI CYCGRG 1 cut(s) 348
Bsp119I TTCGAA 1 cut(s) 92
Bsp143I GATC 9 cut(s) 109, 122, 156, 344, 486, 661, 760, 802, 921
Bsp1720I GCTNAGC 1 cut(s) 831
BspACI CCGC 2 cut(s) 147, 943
BspANI GGCC 1 cut(s) 754
BspCNI CTCAG 1 cut(s) 823
BspDI ATCGAT 2 cut(s) 125, 664
BspLI GGNNCC 1 cut(s) 119
BspPI GGATC 2 cut(s) 494, 768
BspT104I TTCGAA 1 cut(s) 92
BspT107I GGYRCC 1 cut(s) 117
BsrDI GCAATG 1 cut(s) 524
BsrFI RCCGGY 1 cut(s) 688
BsrI ACTGG 1 cut(s) 958
BssAI RCCGGY 1 cut(s) 688
BssECI CCNNGG 2 cut(s) 167, 755
BssMI GATC 9 cut(s) 109, 122, 156, 344, 486, 661, 760, 802, 921
BssNI GRCGYC 1 cut(s) 173
BssSI CACGAG 3 cut(s) 74, 234, 606
BssT1I CCWWGG 1 cut(s) 755
Bst2BI CACGAG 3 cut(s) 74, 234, 606
Bst2UI CCWGG 2 cut(s) 621, 672
Bst6I CTCTTC 1 cut(s) 905
BstACI GRCGYC 1 cut(s) 173
BstBI TTCGAA 1 cut(s) 92
BstC8I GCNNGC 1 cut(s) 244
BstDEI CTNAG 1 cut(s) 831
BstENI CCTNNNNNAGG 1 cut(s) 675
BstF5I GGATG 1 cut(s) 828
BstH2I RGCGCY 1 cut(s) 606
BstHHI GCGC 1 cut(s) 605
BstKTI GATC 9 cut(s) 112, 125, 159, 347, 489, 664, 763, 805, 924
BstMBI GATC 9 cut(s) 109, 122, 156, 344, 486, 661, 760, 802, 921
BstMCI CGRYCG 1 cut(s) 125
BstMWI GCNNNNNNNGC 3 cut(s) 248, 423, 600
BstNI CCWGG 2 cut(s) 621, 672
BstSCI CCNGG 3 cut(s) 166, 619, 670
BstV1I GCAGC 1 cut(s) 238
Bsu15I ATCGAT 2 cut(s) 125, 664
BsuRI GGCC 1 cut(s) 754
BsuTUI ATCGAT 2 cut(s) 125, 664
BtrI CACGTC 1 cut(s) 21
BtsCI GGATG 1 cut(s) 828
Cac8I GCNNGC 1 cut(s) 244
CfoI GCGC 1 cut(s) 605
Cfr10I RCCGGY 1 cut(s) 688
Cfr13I GGNCC 1 cut(s) 752
ClaI ATCGAT 2 cut(s) 125, 664
CviAII CATG 2 cut(s) 463, 492
CviJI RGCY 8 cut(s) 281, 426, 562, 638, 754, 830, 835, 957
CviKI_1 RGCY 8 cut(s) 281, 426, 562, 638, 754, 830, 835, 957
DdeI CTNAG 1 cut(s) 831
DpnI GATC 9 cut(s) 111, 124, 158, 346, 488, 663, 762, 804, 923
DpnII GATC 9 cut(s) 109, 122, 156, 344, 486, 661, 760, 802, 921
Eam1104I CTCTTC 1 cut(s) 905
EarI CTCTTC 1 cut(s) 905
EciI GGCGGA 1 cut(s) 932
Eco130I CCWWGG 1 cut(s) 755
Eco47III AGCGCT 1 cut(s) 604
Eco88I CYCGRG 1 cut(s) 348
EcoNI CCTNNNNNAGG 1 cut(s) 675
EcoO109I RGGNCCY 1 cut(s) 752
EcoRI GAATTC 2 cut(s) 842, 938
EcoRII CCWGG 2 cut(s) 619, 670
EcoT14I CCWWGG 1 cut(s) 755
ErhI CCWWGG 1 cut(s) 755
FaeI CATG 2 cut(s) 466, 495
FaiI YATR 9 cut(s) 144, 215, 301, 327, 464, 493, 740, 742, 749
FalI AAGNNNNNCTT 4 cut(s) 687, 719, 819, 851
FaqI GGGAC 4 cut(s) 184, 317, 729, 883
FatI CATG 2 cut(s) 462, 491
FbaI TGATCA 2 cut(s) 109, 921
Fnu4HI GCNGC 1 cut(s) 252
FokI GGATG 1 cut(s) 835
Fsp4HI GCNGC 1 cut(s) 252
FspBI CTAG 2 cut(s) 540, 756
GlaI GCGC 1 cut(s) 604
GluI GCNGC 1 cut(s) 252
HaeII RGCGCY 1 cut(s) 606
HaeIII GGCC 1 cut(s) 754
HapII CCGG 4 cut(s) 167, 194, 320, 689
HhaI GCGC 1 cut(s) 605
Hin1I GRCGYC 1 cut(s) 173
Hin1II CATG 2 cut(s) 466, 495
Hin6I GCGC 1 cut(s) 603
HinP1I GCGC 1 cut(s) 603
HinfI GANTC 9 cut(s) 63, 275, 329, 536, 543, 586, 722, 735, 933
HpaII CCGG 4 cut(s) 167, 194, 320, 689
HphI GGTGA 2 cut(s) 168, 851
Hpy166II GTNNAC 2 cut(s) 8, 233
Hpy188I TCNGA 2 cut(s) 68, 292
Hpy188III TCNNGA 8 cut(s) 74, 342, 348, 506, 533, 540, 566, 652
Hpy8I GTNNAC 2 cut(s) 8, 233
HpyAV CCTTC 4 cut(s) 361, 759, 765, 912
HpyCH4IV ACGT 2 cut(s) 20, 173
HpyCH4V TGCA 3 cut(s) 204, 254, 359
HpyF10VI GCNNNNNNNGC 3 cut(s) 248, 423, 600
HpyF3I CTNAG 1 cut(s) 831
HpySE526I ACGT 2 cut(s) 20, 173
Hsp92I GRCGYC 1 cut(s) 173
Hsp92II CATG 2 cut(s) 466, 495
HspAI GCGC 1 cut(s) 603
Ksp22I TGATCA 2 cut(s) 109, 921
Kzo9I GATC 9 cut(s) 109, 122, 156, 344, 486, 661, 760, 802, 921
Lsp1109I GCAGC 1 cut(s) 238
LweI GCATC 4 cut(s) 213, 229, 263, 368
MaeI CTAG 2 cut(s) 540, 756
MaeII ACGT 2 cut(s) 20, 173
MaeIII GTNAC 3 cut(s) 174, 629, 790
MalI GATC 9 cut(s) 111, 124, 158, 346, 488, 663, 762, 804, 923
MboI GATC 9 cut(s) 109, 122, 156, 344, 486, 661, 760, 802, 921
MboII GAAGA 9 cut(s) 305, 376, 422, 462, 717, 824, 838, 866, 922
MluCI AATT 4 cut(s) 528, 842, 870, 938
MlyI GAGTC 1 cut(s) 72
MmeI TCCRAC 2 cut(s) 234, 679
MnlI CCTC 3 cut(s) 43, 190, 768
MseI TTAA 1 cut(s) 894
MslI CAYNNNNRTG 1 cut(s) 147
MspA1I CMGCKG 1 cut(s) 281
MspI CCGG 4 cut(s) 167, 194, 320, 689
MspR9I CCNGG 3 cut(s) 168, 621, 672
MvaI CCWGG 2 cut(s) 621, 672
MwoI GCNNNNNNNGC 3 cut(s) 248, 423, 600
NciI CCSGG 1 cut(s) 168
NdeII GATC 9 cut(s) 109, 122, 156, 344, 486, 661, 760, 802, 921
NlaIII CATG 2 cut(s) 466, 495
NlaIV GGNNCC 1 cut(s) 119
NmeAIII GCCGAG 1 cut(s) 614
NmuCI GTSAC 1 cut(s) 174
NspV TTCGAA 1 cut(s) 92
PaeR7I CTCGAG 1 cut(s) 348
PfeI GAWTC 8 cut(s) 275, 329, 536, 543, 586, 722, 735, 933
PfoI TCCNGGA 2 cut(s) 619, 670
PkrI GCNGC 1 cut(s) 253
Ple19I CGATCG 1 cut(s) 125
PleI GAGTC 1 cut(s) 71
PpsI GAGTC 1 cut(s) 71
Psp6I CCWGG 2 cut(s) 619, 670
PspGI CCWGG 2 cut(s) 619, 670
PspN4I GGNNCC 1 cut(s) 119
PspPI GGNCC 1 cut(s) 752
PvuI CGATCG 1 cut(s) 125
PvuII CAGCTG 1 cut(s) 281
RseI CAYNNNNRTG 1 cut(s) 147
SaqAI TTAA 1 cut(s) 894
SatI GCNGC 1 cut(s) 252
Sau3AI GATC 9 cut(s) 109, 122, 156, 344, 486, 661, 760, 802, 921
Sau96I GGNCC 1 cut(s) 752
SchI GAGTC 1 cut(s) 72
ScrFI CCNGG 3 cut(s) 168, 621, 672
SfaNI GCATC 4 cut(s) 213, 229, 263, 368
Sfr274I CTCGAG 1 cut(s) 348
SfuI TTCGAA 1 cut(s) 92
SlaI CTCGAG 1 cut(s) 348
SmiMI CAYNNNNRTG 1 cut(s) 147
SmlI CTYRAG 1 cut(s) 348
SmoI CTYRAG 1 cut(s) 348
Sse9I AATT 4 cut(s) 528, 842, 870, 938
SsiI CCGC 2 cut(s) 147, 943
SspI AATATT 1 cut(s) 512
SspMI CTAG 2 cut(s) 540, 756
StyD4I CCNGG 3 cut(s) 166, 619, 670
StyI CCWWGG 1 cut(s) 755
TaiI ACGT 2 cut(s) 23, 176
TaqI TCGA 9 cut(s) 92, 125, 343, 349, 362, 408, 664, 763, 936
TasI AATT 4 cut(s) 528, 842, 870, 938
TfiI GAWTC 8 cut(s) 275, 329, 536, 543, 586, 722, 735, 933
Tru1I TTAA 1 cut(s) 894
Tru9I TTAA 1 cut(s) 894
TseFI GTSAC 1 cut(s) 174
TseI GCWGC 1 cut(s) 251
Tsp45I GTSAC 1 cut(s) 174
TspDTI ATGAA 5 cut(s) 342, 727, 736, 867, 882
XagI CCTNNNNNAGG 1 cut(s) 675
XapI RAATTY 2 cut(s) 842, 938
XbaI TCTAGA 1 cut(s) 539
XhoI CTCGAG 1 cut(s) 348
XmaJI CCTAGG 1 cut(s) 755
XspI CTAG 2 cut(s) 540, 756
ZraI GACGTC 1 cut(s) 174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.