FvH4_6g01090

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000189
Physical Location & Seq
Reverse (-)
598225 .. 600382
2158 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g01090.t1

Sequence Viewer

Length: 1026 bp
ATGCCGCCACAAACTCACCAAGGAAGAACAGCCACAACAGGAACAAGACCCCACCAAGTAAAACAGAGCAAGAAGAAAACCATGCGTAACGATGAAGACGATGATCAAGGGGGAGGAGGGATCACATGCGGCGCTGTGACGGTGGAGCTGGATCTGCAGGATTTGCCGGAGGGATGCATAGCCAACGTCATCTCTCTGACGACTCCTCCCGATGCGTGCCGGCTGTCGTCGGTTTCCAGGAGTTTCCGGTCGGCCGCCGAGTCCGACGCCGTTTGGAGCAAGTTCCTGCCGCCGGACATTCCCACTAACCTGTCTCACTCGGGGCCTGATGCCCCCAATTGCCGATCCAAATCCAAGGAGTTGTACCTCGCTCTCTGCCACGATCCGGTGCTCATCGACGAGGGCAAAATGAGCTTTTCACTAGACAAATGGAGTGGGAAGAAGTGTTACATGGTAGCTGCAAGAGCCCTTGAGATTGTCTGGGCTGATACTCCTAACTATTGGAAATGGATTTCGATGCCCGATTCGAGGTTTGAAGAGGTTGCTGAGCTTGTTGGTGTTTGCTGGCTTGATATCCGTGGCAAAATTGACATACGCTTGCTGTCCCCCTCAACTATGTACAAAGCTTACGTTGTGTTCAAGTCAACTGCAGCGGCTTATGGGTTTGAGTATCAACCTGCGGAGGTTAGCGTAGGTCTGGTTGGAGGAGCAGAACCCACAAAGCAGACTGTGTTTCTTGATGCTGACAGAGGTCGGACTCAGAGCTACCAGATTGTACCAAGGCGTGTTGGTATTTCCAACAGAAGCCGCATTTTGCCACGAGTGTCCCAGCCTAGGGAGATCAATGATAATCAATACCCGAAGGACAGAGCAGACGGGTGGTTGGAGATTGAGCTGGGTGAGTTCTTCTGTGAAGGAGGAGAAGATGGGGAGTTGGAAATGACTTGTTTGGAAACCAAGGGTGGTCAGTGGAAGGGTGGTCTTATTGTTCAAGGCATTGAGGTCAGGCCACAGAGGAAGTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0003674 GO:0005488 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0010154 GO:0022414 GO:0030246 GO:0032501 GO:0032502 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box PP2

Protein Analysis

342

Amino Acids

37.81

Weight (kDa)

5.75

Isoelectric Point (pI)

46.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 52 - 93 6.2e-07 F-box domain
F-box-like PF12937 53 - 95 3.1e-06 F-box-like
PP2 PF14299 147 - 337 1.2e-57 Phloem protein 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000189)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G80110 AT2G02240 AT2G02250 AT2G02280 AT2G02300 AT2G02310 AT2G02320 AT2G02340 AT2G02350 AT2G02350 AT2G02360
fragaria_vesca FvH4_1g04390 FvH4_4g27460 FvH4_6g01013 FvH4_6g01014 FvH4_6g01020 FvH4_6g01030 FvH4_6g01090 FvH4_6g01090 FvH4_6g01110
malus_domestica MD04G1236300.v1.1 MD04G1237000.v1.1 MD04G1237100.v1.1 MD04G1237300.v1.1 MD04G1237400.v1.1 MD04G1237600.v1.1 MD04G1237700.v1.1 MD04G1239300.v1.1 MD12G1255400.v1.1 MD12G1255500.v1.1 MD12G1255600.v1.1
prunus_persica Prupe.6G356300_v2.0.a1
pyrus_communis pycom04g21010 pycom04g21080 pycom04g21090 pycom12g23410 pycom12g23420 pycom12g23470
rosa_chinensis RchiOBHm_Chr2g0090041 RchiOBHm_Chr2g0105801 RchiOBHm_Chr2g0168101 RchiOBHm_Chr2g0168151 RchiOBHm_Chr3g0448461 RchiOBHm_Chr3g0448471 RchiOBHm_Chr3g0448501 RchiOBHm_Chr3g0448511 RchiOBHm_Chr3g0448521 RchiOBHm_Chr3g0448621 RchiOBHm_Chr3g0450261 RchiOBHm_Chr3g0450281 RchiOBHm_Chr6g0255241
rosa_laevigata RLG00000014851 RLG00000016080 RLG00000017458 RLG00000023974 RLG00000025742 RLG00000025744 RLG00000025883 RLG00000025900 RLG00000025901 RLG00000025903 RLG00000025904
rosa_multiflora Rmu_co8313739.1_g000001 Rmu_co8361343.1_g000001 Rmu_co8363919.1_g000001 Rmu_co8385575.1_g000001 Rmu_co8448943.1_g000001 Rmu_sc0000082.1_g000049 Rmu_sc0002741.1_g000008 Rmu_sc0003116.1_g000039 Rmu_sc0003308.1_g000013 Rmu_sc0005298.1_g000006 Rmu_sc0005298.1_g000008 Rmu_sc0007766.1_g000003 Rmu_sc0011979.1_g000006 Rmu_sc0016252.1_g000001 Rmu_sc0023110.1_g000001 Rmu_sc0023110.1_g000002 Rmu_sc0023110.1_g000003 Rmu_sc0041893.1_g000001
rosa_roxburghii Rroxscaffold_2G00137910 Rroxscaffold_2G00151450 Rroxscaffold_6G00426700 Rroxscaffold_6G00426730 Rroxscaffold_6G00426740 Rroxscaffold_6G00426750 Rroxscaffold_6G00426760 Rroxscaffold_6G00426910 Rroxscaffold_6G00428000 Rroxscaffold_6G00428010
rosa_rugosa Rorug02G0004900 Rorug02G0130400 Rorug02G0130400 Rorug02G0612700 Rorug02G0612900 Rorug02G0613000 Rorug02G0613100 Rorug02G0613100 Rorug02G0614700 Rorug02G0614800 Rorug02G0614900 Rorug02G0626500
rosa_samantha Rh2BG049100 Rh2BG190800 Rh2BG613500 Rh2BG613800 Rh2CG051300 Rh2DG050700 Rh2DG187600 Rh2DG187700 Rh2DG402600 Rh3AG012100 Rh3AG012200 Rh3AG012300 Rh3AG012500 Rh3AG012600 Rh3AG012700 Rh3AG012800 Rh3AG013700 Rh3AG025900 Rh3AG026200 Rh3AG026500 Rh3AG026700 Rh3BG011900 Rh3BG012000 Rh3BG012100 Rh3BG012200 Rh3BG012300 Rh3BG013500 Rh3BG026600 Rh3BG026800 Rh3BG027200 Rh3BG027400 Rh3DG012300 Rh3DG012400 Rh3DG012500 Rh3DG012600 Rh3DG012700 Rh3DG012800 Rh3DG012900 Rh3DG014300 Rh3DG026500 Rh3DG026800 Rh3DG027100 Rh3DG027200 Rh3DG122000 Rh3DG282500 Rh5BG266700 Rh6BG370500 Rh7CG395700
rosa_wichuraiana Rw0G020400 Rw2G004010 Rw2G014220 Rw3G000940 Rw3G000950 Rw3G000960 Rw3G001010 Rw3G002090 Rw3G002100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 685
AciI CCGC 7 cut(s) 5, 129, 255, 290, 653, 680, 808
AclWI GGATC 4 cut(s) 128, 159, 339, 377
AcoI YGGCCR 1 cut(s) 252
AcyI GRCGYC 1 cut(s) 267
AfaI GTAC 3 cut(s) 365, 620, 777
AfiI CCNNNNNNNGG 5 cut(s) 292, 385, 528, 834, 835
AgsI TTSAA 3 cut(s) 536, 640, 992
AjnI CCWGG 1 cut(s) 236
AluBI AGCT 7 cut(s) 148, 414, 458, 550, 626, 765, 895
AluI AGCT 7 cut(s) 148, 414, 458, 550, 626, 765, 895
Alw21I GWGCWC 1 cut(s) 393
Alw26I GTCTC 1 cut(s) 318
AlwI GGATC 4 cut(s) 128, 159, 339, 377
Ama87I CYCGRG 1 cut(s) 319
AoxI GGCC 3 cut(s) 252, 323, 1007
ApeKI GCWGC 2 cut(s) 458, 650
AspA2I CCTAGG 1 cut(s) 833
AspLEI GCGC 1 cut(s) 134
AspS9I GGNCC 1 cut(s) 323
AsuHPI GGTGA 2 cut(s) 8, 911
AvaI CYCGRG 1 cut(s) 319
AvrII CCTAGG 1 cut(s) 833
BanII GRGCYC 1 cut(s) 469
BarI GAAGNNNNNNTAC 2 cut(s) 431, 463
BauI CACGAG 1 cut(s) 819
BbsI GAAGAC 1 cut(s) 102
Bbv12I GWGCWC 1 cut(s) 393
BbvI GCAGC 2 cut(s) 445, 662
BccI CCATC 1 cut(s) 920
BceAI ACGGC 1 cut(s) 254
BciT130I CCWGG 1 cut(s) 238
BclI TGATCA 1 cut(s) 103
BcoDI GTCTC 1 cut(s) 318
BfaI CTAG 3 cut(s) 422, 834, 1024
BfmI CTRYAG 2 cut(s) 155, 648
BfoI RGCGCY 1 cut(s) 135
BfuAI ACCTGC 1 cut(s) 685
BisI GCNGC 8 cut(s) 5, 130, 255, 290, 459, 651, 654, 808
BlnI CCTAGG 1 cut(s) 833
BlpI GCTNAGC 1 cut(s) 546
BlsI GCNGC 8 cut(s) 6, 131, 256, 291, 460, 652, 655, 809
Bme1390I CCNGG 1 cut(s) 238
BmeT110I CYCGRG 1 cut(s) 319
BmgT120I GGNCC 1 cut(s) 323
BmiI GGNNCC 1 cut(s) 324
BmrFI CCNGG 1 cut(s) 238
BmsI GCATC 5 cut(s) 164, 202, 319, 507, 730
BoxI GACNNNNGTC 1 cut(s) 750
BpiI GAAGAC 1 cut(s) 102
Bpu1102I GCTNAGC 1 cut(s) 546
BpuEI CTTGAG 1 cut(s) 491
BsaBI GATNNNNATC 1 cut(s) 349
BsaHI GRCGYC 1 cut(s) 267
BsaJI CCNNGG 6 cut(s) 19, 354, 577, 779, 833, 957
BsaWI WCCGGW 2 cut(s) 246, 385
BsaXI ACNNNNNCTCC 2 cut(s) 190, 220
Bsc4I CCNNNNNNNGG 5 cut(s) 292, 385, 528, 834, 835
Bse118I RCCGGY 1 cut(s) 219
Bse8I GATNNNNATC 1 cut(s) 349
BseBI CCWGG 1 cut(s) 238
BseDI CCNNGG 6 cut(s) 19, 354, 577, 779, 833, 957
BseGI GGATG 1 cut(s) 179
BseJI GATNNNNATC 1 cut(s) 349
BseLI CCNNNNNNNGG 5 cut(s) 292, 385, 528, 834, 835
BseMII CTCAG 2 cut(s) 537, 773
BseRI GAGGAG 4 cut(s) 129, 195, 720, 933
BseX3I CGGCCG 1 cut(s) 252
BseXI GCAGC 2 cut(s) 445, 662
BseYI CCCAGC 2 cut(s) 828, 895
Bsh1285I CGRYCG 2 cut(s) 251, 255
BshFI GGCC 3 cut(s) 254, 325, 1009
BsiEI CGRYCG 2 cut(s) 251, 255
BsiHKAI GWGCWC 1 cut(s) 393
BsiHKCI CYCGRG 1 cut(s) 319
BsiSI CCGG 5 cut(s) 167, 220, 247, 293, 386
BslFI GGGAC 2 cut(s) 589, 811
BslI CCNNNNNNNGG 5 cut(s) 292, 385, 528, 834, 835
BsmAI GTCTC 1 cut(s) 318
BsmFI GGGAC 2 cut(s) 589, 811
BsnI GGCC 3 cut(s) 254, 325, 1009
BsoBI CYCGRG 1 cut(s) 319
Bsp1286I GDGCHC 2 cut(s) 393, 469
Bsp1407I TGTACA 1 cut(s) 618
Bsp143I GATC 6 cut(s) 103, 120, 151, 344, 382, 840
Bsp1720I GCTNAGC 1 cut(s) 546
BspACI CCGC 7 cut(s) 5, 129, 255, 290, 653, 680, 808
BspANI GGCC 3 cut(s) 254, 325, 1009
BspCNI CTCAG 2 cut(s) 538, 772
BspLI GGNNCC 1 cut(s) 324
BspMAI CTGCAG 2 cut(s) 159, 652
BspMI ACCTGC 1 cut(s) 685
BspPI GGATC 4 cut(s) 128, 159, 339, 377
BsrFI RCCGGY 1 cut(s) 219
BsrGI TGTACA 1 cut(s) 618
BssAI RCCGGY 1 cut(s) 219
BssECI CCNNGG 6 cut(s) 19, 354, 577, 779, 833, 957
BssMI GATC 6 cut(s) 103, 120, 151, 344, 382, 840
BssNI GRCGYC 1 cut(s) 267
BssSI CACGAG 1 cut(s) 819
BssT1I CCWWGG 5 cut(s) 19, 354, 779, 833, 957
Bst2BI CACGAG 1 cut(s) 819
Bst2UI CCWGG 1 cut(s) 238
Bst4CI ACNGT 2 cut(s) 142, 730
Bst6I CTCTTC 1 cut(s) 531
BstACI GRCGYC 1 cut(s) 267
BstAPI GCANNNNNTGC 1 cut(s) 163
BstAUI TGTACA 1 cut(s) 618
BstC8I GCNNGC 4 cut(s) 217, 221, 566, 599
BstDEI CTNAG 2 cut(s) 546, 759
BstDSI CCRYGG 1 cut(s) 577
BstF5I GGATG 1 cut(s) 179
BstH2I RGCGCY 1 cut(s) 135
BstHHI GCGC 1 cut(s) 134
BstKTI GATC 6 cut(s) 106, 123, 154, 347, 385, 843
BstMAI GTCTC 1 cut(s) 318
BstMBI GATC 6 cut(s) 103, 120, 151, 344, 382, 840
BstMCI CGRYCG 2 cut(s) 251, 255
BstMWI GCNNNNNNNGC 4 cut(s) 154, 163, 411, 464
BstNI CCWGG 1 cut(s) 238
BstNSI RCATGY 1 cut(s) 129
BstPAI GACNNNNGTC 1 cut(s) 750
BstSCI CCNGG 1 cut(s) 236
BstSFI CTRYAG 2 cut(s) 155, 648
BstV1I GCAGC 2 cut(s) 445, 662
BstV2I GAAGAC 1 cut(s) 102
BstX2I RGATCY 1 cut(s) 151
BstYI RGATCY 1 cut(s) 151
BstZI CGGCCG 1 cut(s) 252
BsuRI GGCC 3 cut(s) 254, 325, 1009
BtgI CCRYGG 1 cut(s) 577
BtsCI GGATG 1 cut(s) 179
BtsIMutI CAGTG 1 cut(s) 974
BveI ACCTGC 1 cut(s) 685
Cac8I GCNNGC 4 cut(s) 217, 221, 566, 599
CfoI GCGC 1 cut(s) 134
Cfr10I RCCGGY 1 cut(s) 219
Cfr13I GGNCC 1 cut(s) 323
CseI GACGC 1 cut(s) 275
Csp6I GTAC 3 cut(s) 364, 619, 776
CspCI CAANNNNNGTGG 2 cut(s) 415, 450
CviAII CATG 3 cut(s) 82, 126, 451
CviQI GTAC 3 cut(s) 364, 619, 776
DdeI CTNAG 2 cut(s) 546, 759
DpnI GATC 6 cut(s) 105, 122, 153, 346, 384, 842
DpnII GATC 6 cut(s) 103, 120, 151, 344, 382, 840
EaeI YGGCCR 1 cut(s) 252
EagI CGGCCG 1 cut(s) 252
Eam1104I CTCTTC 1 cut(s) 531
EarI CTCTTC 1 cut(s) 531
EclXI CGGCCG 1 cut(s) 252
Eco130I CCWWGG 5 cut(s) 19, 354, 779, 833, 957
Eco24I GRGCYC 1 cut(s) 469
Eco32I GATATC 1 cut(s) 574
Eco52I CGGCCG 1 cut(s) 252
Eco88I CYCGRG 1 cut(s) 319
EcoO109I RGGNCCY 1 cut(s) 323
EcoRII CCWGG 1 cut(s) 236
EcoRV GATATC 1 cut(s) 574
EcoT14I CCWWGG 5 cut(s) 19, 354, 779, 833, 957
EcoT22I ATGCAT 1 cut(s) 179
EcoT38I GRGCYC 1 cut(s) 469
ErhI CCWWGG 5 cut(s) 19, 354, 779, 833, 957
FaeI CATG 3 cut(s) 85, 129, 454
FaiI YATR 7 cut(s) 83, 127, 179, 452, 593, 617, 660
FaqI GGGAC 2 cut(s) 589, 811
FatI CATG 3 cut(s) 81, 125, 450
FbaI TGATCA 1 cut(s) 103
Fnu4HI GCNGC 8 cut(s) 5, 130, 255, 290, 459, 651, 654, 808
FokI GGATG 1 cut(s) 186
FriOI GRGCYC 1 cut(s) 469
Fsp4HI GCNGC 8 cut(s) 5, 130, 255, 290, 459, 651, 654, 808
FspBI CTAG 3 cut(s) 422, 834, 1024
GlaI GCGC 1 cut(s) 133
GluI GCNGC 8 cut(s) 5, 130, 255, 290, 459, 651, 654, 808
GsaI CCCAGC 2 cut(s) 832, 899
HaeII RGCGCY 1 cut(s) 135
HaeIII GGCC 3 cut(s) 254, 325, 1009
HapII CCGG 5 cut(s) 167, 220, 247, 293, 386
HgaI GACGC 1 cut(s) 275
HhaI GCGC 1 cut(s) 134
Hin1I GRCGYC 1 cut(s) 267
Hin1II CATG 3 cut(s) 85, 129, 454
Hin6I GCGC 1 cut(s) 132
HinP1I GCGC 1 cut(s) 132
HincII GTYRAC 1 cut(s) 645
HindII GTYRAC 1 cut(s) 645
HindIII AAGCTT 1 cut(s) 624
HinfI GANTC 4 cut(s) 202, 260, 524, 757
HpaII CCGG 5 cut(s) 167, 220, 247, 293, 386
HphI GGTGA 2 cut(s) 8, 911
Hpy166II GTNNAC 1 cut(s) 645
Hpy188I TCNGA 4 cut(s) 198, 265, 756, 762
Hpy188III TCNNGA 2 cut(s) 209, 737
Hpy8I GTNNAC 1 cut(s) 645
Hpy99I CGWCG 3 cut(s) 232, 269, 401
HpyAV CCTTC 3 cut(s) 856, 908, 967
HpyCH4III ACNGT 2 cut(s) 142, 730
HpyCH4IV ACGT 2 cut(s) 186, 630
HpyCH4V TGCA 4 cut(s) 157, 177, 461, 650
HpyF10VI GCNNNNNNNGC 4 cut(s) 154, 163, 411, 464
HpyF3I CTNAG 2 cut(s) 546, 759
HpySE526I ACGT 2 cut(s) 186, 630
Hsp92I GRCGYC 1 cut(s) 267
Hsp92II CATG 3 cut(s) 85, 129, 454
HspAI GCGC 1 cut(s) 132
KroI GCCGGC 1 cut(s) 219
KroNI GCCGGC 1 cut(s) 221
Ksp22I TGATCA 1 cut(s) 103
Kzo9I GATC 6 cut(s) 103, 120, 151, 344, 382, 840
LmnI GCTCC 3 cut(s) 145, 276, 707
Lsp1109I GCAGC 2 cut(s) 445, 662
LweI GCATC 5 cut(s) 164, 202, 319, 507, 730
MaeI CTAG 3 cut(s) 422, 834, 1024
MaeII ACGT 2 cut(s) 186, 630
MaeIII GTNAC 3 cut(s) 86, 136, 446
MalI GATC 6 cut(s) 105, 122, 153, 346, 384, 842
MboI GATC 6 cut(s) 103, 120, 151, 344, 382, 840
MboII GAAGA 7 cut(s) 36, 85, 107, 451, 548, 898, 935
MfeI CAATTG 1 cut(s) 337
MflI RGATCY 1 cut(s) 151
MhlI GDGCHC 2 cut(s) 393, 469
MluCI AATT 2 cut(s) 337, 585
MlyI GAGTC 3 cut(s) 196, 269, 751
MmeI TCCRAC 6 cut(s) 288, 682, 734, 822, 864, 915
Mph1103I ATGCAT 1 cut(s) 179
MroNI GCCGGC 1 cut(s) 219
MspA1I CMGCKG 1 cut(s) 653
MspI CCGG 5 cut(s) 167, 220, 247, 293, 386
MspR9I CCNGG 1 cut(s) 238
MunI CAATTG 1 cut(s) 337
MvaI CCWGG 1 cut(s) 238
MwoI GCNNNNNNNGC 4 cut(s) 154, 163, 411, 464
NaeI GCCGGC 1 cut(s) 221
NdeII GATC 6 cut(s) 103, 120, 151, 344, 382, 840
NgoMIV GCCGGC 1 cut(s) 219
NlaIII CATG 3 cut(s) 85, 129, 454
NlaIV GGNNCC 1 cut(s) 324
NmeAIII GCCGAG 1 cut(s) 283
NmuCI GTSAC 1 cut(s) 136
NsiI ATGCAT 1 cut(s) 179
NspI RCATGY 1 cut(s) 129
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PdiI GCCGGC 1 cut(s) 221
PfeI GAWTC 1 cut(s) 524
PfoI TCCNGGA 1 cut(s) 236
PkrI GCNGC 8 cut(s) 6, 131, 256, 291, 460, 652, 655, 809
PleI GAGTC 3 cut(s) 196, 268, 751
PpsI GAGTC 3 cut(s) 196, 268, 751
PshAI GACNNNNGTC 1 cut(s) 750
Psp6I CCWGG 1 cut(s) 236
PspFI CCCAGC 2 cut(s) 828, 895
PspGI CCWGG 1 cut(s) 236
PspN4I GGNNCC 1 cut(s) 324
PspPI GGNCC 1 cut(s) 323
PstI CTGCAG 2 cut(s) 159, 652
PsuI RGATCY 1 cut(s) 151
RsaI GTAC 3 cut(s) 365, 620, 777
RsaNI GTAC 3 cut(s) 364, 619, 776
SatI GCNGC 8 cut(s) 5, 130, 255, 290, 459, 651, 654, 808
Sau3AI GATC 6 cut(s) 103, 120, 151, 344, 382, 840
Sau96I GGNCC 1 cut(s) 323
SchI GAGTC 3 cut(s) 196, 269, 751
ScrFI CCNGG 1 cut(s) 238
SduI GDGCHC 2 cut(s) 393, 469
SfaNI GCATC 5 cut(s) 164, 202, 319, 507, 730
SfcI CTRYAG 2 cut(s) 155, 648
SmlI CTYRAG 1 cut(s) 470
SmoI CTYRAG 1 cut(s) 470
Sse9I AATT 2 cut(s) 337, 585
SsiI CCGC 7 cut(s) 5, 129, 255, 290, 653, 680, 808
SspMI CTAG 3 cut(s) 422, 834, 1024
StyD4I CCNGG 1 cut(s) 236
StyI CCWWGG 5 cut(s) 19, 354, 779, 833, 957
TaaI ACNGT 2 cut(s) 142, 730
TaiI ACGT 2 cut(s) 189, 633
TaqI TCGA 3 cut(s) 396, 515, 527
TasI AATT 2 cut(s) 337, 585
TatI WGTACW 1 cut(s) 618
TauI GCSGC 6 cut(s) 7, 132, 257, 292, 656, 810
TfiI GAWTC 1 cut(s) 524
TscAI CASTG 1 cut(s) 974
TseFI GTSAC 1 cut(s) 136
TseI GCWGC 2 cut(s) 458, 650
Tsp45I GTSAC 1 cut(s) 136
TspDTI ATGAA 1 cut(s) 108
TspGWI ACGGA 1 cut(s) 566
TspRI CASTG 1 cut(s) 974
XceI RCATGY 1 cut(s) 129
XmaJI CCTAGG 1 cut(s) 833
XspI CTAG 3 cut(s) 422, 834, 1024
Zsp2I ATGCAT 1 cut(s) 179
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.