Rorug02G0612700

Phloem protein 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000189
Physical Location & Seq
Reverse (-)
72964354 .. 72967454
3101 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0612700.1

Sequence Viewer

Length: 936 bp
ATGGAGCCAGGCCGTCTTTTCTTTGAGCCTCAGCAAGGTGGTGGCGGCAACATGTTGTTCCTCGGGAGTGGTGATCACGTTTTCCGAGGGCCGAGATCGATAATTGGCATGGAGGAAACTTCGAGGAGGCGATCGTTTTTCAGCACGCAAGATGAATTGTACGAGGAGGAATATTACGACGAGCAGATGCCAGAGAAGAAGCGCCGCCTCACGGCCGAGCAGGTGCATCTGCTGGAGAAGAGCTTTGAGACAGATAACAAACTGGAGCCGGATCGGAAGACGCAGCTGGCCAAGAAGCTAGGGCTGCAGCCAAGACAGGTGGCTGTGTGGTTCCAGAATCGTAGGGCTCGCTGGAAGACAAAGCAGCTTGAGCGCGATTATGATGTTCTAAAAGCCTCTTATGACTCCCTTTTGGCTAACAATGATTCTATCCTCAAGGAGAATCAGAAGCTCAAATCCGAGGTGGTCGCCATAACTGAGAAACTTGAAGCTAAAGATCAGGAGGAAAAAGGAGCAGCATTTGCAGGTGATCATCATCATCATCATGAGAAGCGACTCCCTGGTCATCTTCTTCCAGGTGAGAAAGAGATGATCACGGATGTCAATGTTCCAATGAGCCTCCAGTTCGACGTGAAGGTTGAGGATCGCCTGAGCTCCGGGAGCGGCGCTTCGGCCGTGGTGGACGAGGAAGGCCCTCAGCACGTGGACAGCGGTGACTCGTATTTCCCAAGTAGCTCTGACGTCCACAATTATCCTCCTCATCCTCCACATGATCATCACCACTGCATGGGGCTAGTAGGTGGGGTCCACTCGGAGGACGATGGCAGCGATGACGGTCAGAGTTACTTCTCTGATGTGTTTGCCGCCGCCGCCGCAGAGCAGCAGCAGCAGCAGCCGGAGGAGGGCGTGTCGATGGGTTGGTGGGTGTGGTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PP2

Protein Analysis

311

Amino Acids

35.29

Weight (kDa)

5.2

Isoelectric Point (pI)

62.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Homeodomain PF00046 66 - 119 3.7e-18 Homeodomain
HALZ PF02183 121 - 162 1.1e-17 Homeobox associated leucine zipper
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000189)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G80110 AT2G02240 AT2G02250 AT2G02280 AT2G02300 AT2G02310 AT2G02320 AT2G02340 AT2G02350 AT2G02350 AT2G02360
fragaria_vesca FvH4_1g04390 FvH4_4g27460 FvH4_6g01013 FvH4_6g01014 FvH4_6g01020 FvH4_6g01030 FvH4_6g01090 FvH4_6g01090 FvH4_6g01110
malus_domestica MD04G1236300.v1.1 MD04G1237000.v1.1 MD04G1237100.v1.1 MD04G1237300.v1.1 MD04G1237400.v1.1 MD04G1237600.v1.1 MD04G1237700.v1.1 MD04G1239300.v1.1 MD12G1255400.v1.1 MD12G1255500.v1.1 MD12G1255600.v1.1
prunus_persica Prupe.6G356300_v2.0.a1
pyrus_communis pycom04g21010 pycom04g21080 pycom04g21090 pycom12g23410 pycom12g23420 pycom12g23470
rosa_chinensis RchiOBHm_Chr2g0090041 RchiOBHm_Chr2g0105801 RchiOBHm_Chr2g0168101 RchiOBHm_Chr2g0168151 RchiOBHm_Chr3g0448461 RchiOBHm_Chr3g0448471 RchiOBHm_Chr3g0448501 RchiOBHm_Chr3g0448511 RchiOBHm_Chr3g0448521 RchiOBHm_Chr3g0448621 RchiOBHm_Chr3g0450261 RchiOBHm_Chr3g0450281 RchiOBHm_Chr6g0255241
rosa_laevigata RLG00000014851 RLG00000016080 RLG00000017458 RLG00000023974 RLG00000025742 RLG00000025744 RLG00000025883 RLG00000025900 RLG00000025901 RLG00000025903 RLG00000025904
rosa_multiflora Rmu_co8313739.1_g000001 Rmu_co8361343.1_g000001 Rmu_co8363919.1_g000001 Rmu_co8385575.1_g000001 Rmu_co8448943.1_g000001 Rmu_sc0000082.1_g000049 Rmu_sc0002741.1_g000008 Rmu_sc0003116.1_g000039 Rmu_sc0003308.1_g000013 Rmu_sc0005298.1_g000006 Rmu_sc0005298.1_g000008 Rmu_sc0007766.1_g000003 Rmu_sc0011979.1_g000006 Rmu_sc0016252.1_g000001 Rmu_sc0023110.1_g000001 Rmu_sc0023110.1_g000002 Rmu_sc0023110.1_g000003 Rmu_sc0041893.1_g000001
rosa_roxburghii Rroxscaffold_2G00137910 Rroxscaffold_2G00151450 Rroxscaffold_6G00426700 Rroxscaffold_6G00426730 Rroxscaffold_6G00426740 Rroxscaffold_6G00426750 Rroxscaffold_6G00426760 Rroxscaffold_6G00426910 Rroxscaffold_6G00428000 Rroxscaffold_6G00428010
rosa_rugosa Rorug02G0004900 Rorug02G0130400 Rorug02G0130400 Rorug02G0612700 Rorug02G0612900 Rorug02G0613000 Rorug02G0613100 Rorug02G0613100 Rorug02G0614700 Rorug02G0614800 Rorug02G0614900 Rorug02G0626500
rosa_samantha Rh2BG049100 Rh2BG190800 Rh2BG613500 Rh2BG613800 Rh2CG051300 Rh2DG050700 Rh2DG187600 Rh2DG187700 Rh2DG402600 Rh3AG012100 Rh3AG012200 Rh3AG012300 Rh3AG012500 Rh3AG012600 Rh3AG012700 Rh3AG012800 Rh3AG013700 Rh3AG025900 Rh3AG026200 Rh3AG026500 Rh3AG026700 Rh3BG011900 Rh3BG012000 Rh3BG012100 Rh3BG012200 Rh3BG012300 Rh3BG013500 Rh3BG026600 Rh3BG026800 Rh3BG027200 Rh3BG027400 Rh3DG012300 Rh3DG012400 Rh3DG012500 Rh3DG012600 Rh3DG012700 Rh3DG012800 Rh3DG012900 Rh3DG014300 Rh3DG026500 Rh3DG026800 Rh3DG027100 Rh3DG027200 Rh3DG122000 Rh3DG282500 Rh5BG266700 Rh6BG370500 Rh7CG395700
rosa_wichuraiana Rw0G020400 Rw2G004010 Rw2G014220 Rw3G000940 Rw3G000950 Rw3G000960 Rw3G001010 Rw3G002090 Rw3G002100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 211, 515
AasI GACNNNNNNGTC 1 cut(s) 561
AatII GACGTC 1 cut(s) 744
Acc36I ACCTGC 2 cut(s) 211, 515
AccB7I CCANNNNNTGG 1 cut(s) 787
AccBSI CCGCTC 1 cut(s) 663
AccII CGCG 1 cut(s) 375
AciI CCGC 8 cut(s) 45, 205, 663, 711, 864, 867, 870, 873
AclWI GGATC 2 cut(s) 279, 651
AcoI YGGCCR 3 cut(s) 213, 288, 672
AcvI CACGTG 1 cut(s) 703
AcyI GRCGYC 1 cut(s) 741
AfaI GTAC 1 cut(s) 161
AfiI CCNNNNNNNGG 5 cut(s) 35, 211, 787, 814, 902
AflIII ACRYGT 1 cut(s) 51
AgsI TTSAA 1 cut(s) 488
AjiI CACGTC 1 cut(s) 631
AjnI CCWGG 3 cut(s) 7, 559, 574
AluBI AGCT 8 cut(s) 243, 286, 298, 367, 451, 491, 654, 735
AluI AGCT 8 cut(s) 243, 286, 298, 367, 451, 491, 654, 735
Alw21I GWGCWC 1 cut(s) 656
Alw26I GTCTC 1 cut(s) 242
AlwI GGATC 2 cut(s) 279, 651
Ama87I CYCGRG 1 cut(s) 62
AoxI GGCC 6 cut(s) 10, 89, 213, 288, 672, 691
AspLEI GCGC 3 cut(s) 204, 375, 668
AspS9I GGNCC 4 cut(s) 89, 692, 805, 930
AsuC2I CCSGG 1 cut(s) 658
AsuHPI GGTGA 5 cut(s) 83, 539, 590, 725, 770
AvaI CYCGRG 1 cut(s) 62
AvaII GGWCC 2 cut(s) 805, 930
BalI TGGCCA 1 cut(s) 290
BanII GRGCYC 2 cut(s) 349, 656
BbrPI CACGTG 1 cut(s) 703
BbsI GAAGAC 2 cut(s) 284, 362
Bbv12I GWGCWC 1 cut(s) 656
BbvCI CCTCAGC 2 cut(s) 30, 696
BccI CCATC 2 cut(s) 815, 907
BceAI ACGGC 2 cut(s) 228, 659
BciT130I CCWGG 3 cut(s) 9, 561, 576
BclI TGATCA 4 cut(s) 73, 529, 591, 772
BcnI CCSGG 1 cut(s) 658
BcoDI GTCTC 1 cut(s) 242
BfaI CTAG 2 cut(s) 299, 794
BfmI CTRYAG 1 cut(s) 305
BfoI RGCGCY 2 cut(s) 205, 669
BfuAI ACCTGC 2 cut(s) 211, 515
Bme1390I CCNGG 4 cut(s) 9, 561, 576, 658
Bme18I GGWCC 2 cut(s) 805, 930
BmeT110I CYCGRG 1 cut(s) 62
BmgBI CACGTC 1 cut(s) 631
BmgT120I GGNCC 4 cut(s) 89, 692, 805, 930
BmiI GGNNCC 4 cut(s) 6, 267, 332, 806
BmrFI CCNGG 4 cut(s) 9, 561, 576, 658
BmsI GCATC 2 cut(s) 177, 235
BpiI GAAGAC 2 cut(s) 284, 362
BpmI CTGGAG 3 cut(s) 254, 284, 605
Bpu10I CCTNAGC 3 cut(s) 30, 650, 696
BpuEI CTTGAG 2 cut(s) 389, 419
BpuMI CCSGG 1 cut(s) 658
Bsa29I ATCGAT 1 cut(s) 98
BsaAI YACGTR 1 cut(s) 703
BsaBI GATNNNNATC 1 cut(s) 534
BsaHI GRCGYC 1 cut(s) 741
BsaJI CCNNGG 5 cut(s) 61, 85, 459, 559, 675
BsaXI ACNNNNNCTCC 2 cut(s) 893, 923
Bsc4I CCNNNNNNNGG 5 cut(s) 35, 211, 787, 814, 902
Bse1I ACTGG 2 cut(s) 267, 622
Bse8I GATNNNNATC 1 cut(s) 534
BseBI CCWGG 3 cut(s) 9, 561, 576
BseCI ATCGAT 1 cut(s) 98
BseDI CCNNGG 5 cut(s) 61, 85, 459, 559, 675
BseGI GGATG 2 cut(s) 604, 760
BseJI GATNNNNATC 1 cut(s) 534
BseLI CCNNNNNNNGG 5 cut(s) 35, 211, 787, 814, 902
BseMII CTCAG 4 cut(s) 44, 468, 641, 710
BseNI ACTGG 2 cut(s) 267, 622
BseRI GAGGAG 4 cut(s) 139, 179, 747, 914
BseX3I CGGCCG 2 cut(s) 213, 672
Bsh1236I CGCG 1 cut(s) 375
Bsh1285I CGRYCG 3 cut(s) 134, 216, 675
BshFI GGCC 6 cut(s) 12, 91, 215, 290, 674, 693
BshVI ATCGAT 1 cut(s) 98
BsiEI CGRYCG 3 cut(s) 134, 216, 675
BsiHKAI GWGCWC 1 cut(s) 656
BsiHKCI CYCGRG 1 cut(s) 62
BsiSI CCGG 3 cut(s) 269, 657, 896
BslI CCNNNNNNNGG 5 cut(s) 35, 211, 787, 814, 902
BsmAI GTCTC 1 cut(s) 242
BsnI GGCC 6 cut(s) 12, 91, 215, 290, 674, 693
BsoBI CYCGRG 1 cut(s) 62
Bsp1286I GDGCHC 2 cut(s) 349, 656
Bsp143I GATC 9 cut(s) 73, 95, 131, 271, 496, 529, 591, 643, 772
BspACI CCGC 8 cut(s) 45, 205, 663, 711, 864, 867, 870, 873
BspANI GGCC 6 cut(s) 12, 91, 215, 290, 674, 693
BspCNI CTCAG 4 cut(s) 43, 469, 642, 709
BspDI ATCGAT 1 cut(s) 98
BspFNI CGCG 1 cut(s) 375
BspHI TCATGA 1 cut(s) 544
BspLI GGNNCC 4 cut(s) 6, 267, 332, 806
BspMAI CTGCAG 1 cut(s) 309
BspMI ACCTGC 2 cut(s) 211, 515
BspPI GGATC 2 cut(s) 279, 651
BspQI GCTCTTC 1 cut(s) 233
BsrBI CCGCTC 1 cut(s) 663
BsrI ACTGG 2 cut(s) 267, 622
BssECI CCNNGG 5 cut(s) 61, 85, 459, 559, 675
BssMI GATC 9 cut(s) 73, 95, 131, 271, 496, 529, 591, 643, 772
BssNI GRCGYC 1 cut(s) 741
Bst2UI CCWGG 3 cut(s) 9, 561, 576
Bst4CI ACNGT 1 cut(s) 836
Bst6I CTCTTC 1 cut(s) 233
BstACI GRCGYC 1 cut(s) 741
BstAPI GCANNNNNTGC 1 cut(s) 521
BstBAI YACGTR 1 cut(s) 703
BstC8I GCNNGC 3 cut(s) 146, 288, 349
BstDEI CTNAG 4 cut(s) 30, 477, 650, 696
BstDSI CCRYGG 1 cut(s) 675
BstENI CCTNNNNNAGG 1 cut(s) 33
BstF5I GGATG 2 cut(s) 604, 760
BstFNI CGCG 1 cut(s) 375
BstH2I RGCGCY 2 cut(s) 205, 669
BstHHI GCGC 3 cut(s) 204, 375, 668
BstKTI GATC 9 cut(s) 76, 98, 134, 274, 499, 532, 594, 646, 775
BstMAI GTCTC 1 cut(s) 242
BstMBI GATC 9 cut(s) 73, 95, 131, 271, 496, 529, 591, 643, 772
BstMCI CGRYCG 3 cut(s) 134, 216, 675
BstMWI GCNNNNNNNGC 9 cut(s) 304, 370, 521, 660, 869, 872, 886, 889, 892
BstNI CCWGG 3 cut(s) 9, 561, 576
BstNSI RCATGY 1 cut(s) 55
BstSCI CCNGG 4 cut(s) 7, 559, 574, 656
BstSFI CTRYAG 1 cut(s) 305
BstUI CGCG 1 cut(s) 375
BstV2I GAAGAC 2 cut(s) 284, 362
BstZI CGGCCG 2 cut(s) 213, 672
Bsu15I ATCGAT 1 cut(s) 98
BsuRI GGCC 6 cut(s) 12, 91, 215, 290, 674, 693
BsuTUI ATCGAT 1 cut(s) 98
BtgI CCRYGG 1 cut(s) 675
BtgZI GCGATG 1 cut(s) 843
BtrI CACGTC 1 cut(s) 631
BtsCI GGATG 2 cut(s) 604, 760
BtsI GCAGTG 1 cut(s) 781
BtsIMutI CAGTG 1 cut(s) 781
BveI ACCTGC 2 cut(s) 211, 515
Cac8I GCNNGC 3 cut(s) 146, 288, 349
CciI TCATGA 1 cut(s) 544
CfoI GCGC 3 cut(s) 204, 375, 668
Cfr13I GGNCC 4 cut(s) 89, 692, 805, 930
ClaI ATCGAT 1 cut(s) 98
CseI GACGC 1 cut(s) 289
Csp6I GTAC 1 cut(s) 160
CspCI CAANNNNNGTGG 2 cut(s) 300, 335
CviAII CATG 5 cut(s) 52, 109, 545, 770, 787
CviQI GTAC 1 cut(s) 160
DdeI CTNAG 4 cut(s) 30, 477, 650, 696
DpnI GATC 9 cut(s) 75, 97, 133, 273, 498, 531, 593, 645, 774
DpnII GATC 9 cut(s) 73, 95, 131, 271, 496, 529, 591, 643, 772
DrdI GACNNNNNNGTC 1 cut(s) 561
DseDI GACNNNNNNGTC 1 cut(s) 561
EaeI YGGCCR 3 cut(s) 213, 288, 672
EagI CGGCCG 2 cut(s) 213, 672
Eam1104I CTCTTC 1 cut(s) 233
EarI CTCTTC 1 cut(s) 233
Ecl136II GAGCTC 1 cut(s) 654
EclXI CGGCCG 2 cut(s) 213, 672
Eco24I GRGCYC 2 cut(s) 349, 656
Eco47I GGWCC 2 cut(s) 805, 930
Eco52I CGGCCG 2 cut(s) 213, 672
Eco53kI GAGCTC 1 cut(s) 654
Eco72I CACGTG 1 cut(s) 703
Eco88I CYCGRG 1 cut(s) 62
EcoICRI GAGCTC 1 cut(s) 654
EcoNI CCTNNNNNAGG 1 cut(s) 33
EcoO109I RGGNCCY 1 cut(s) 692
EcoRII CCWGG 3 cut(s) 7, 559, 574
EcoT38I GRGCYC 2 cut(s) 349, 656
FaeI CATG 5 cut(s) 55, 112, 548, 773, 790
FaiI YATR 8 cut(s) 53, 110, 381, 402, 473, 546, 771, 788
FatI CATG 5 cut(s) 51, 108, 544, 769, 786
FbaI TGATCA 4 cut(s) 73, 529, 591, 772
FokI GGATG 2 cut(s) 611, 747
FriOI GRGCYC 2 cut(s) 349, 656
FspBI CTAG 2 cut(s) 299, 794
GlaI GCGC 3 cut(s) 203, 374, 667
GsuI CTGGAG 3 cut(s) 254, 284, 605
HaeII RGCGCY 2 cut(s) 205, 669
HaeIII GGCC 6 cut(s) 12, 91, 215, 290, 674, 693
HapII CCGG 3 cut(s) 269, 657, 896
HgaI GACGC 1 cut(s) 289
HhaI GCGC 3 cut(s) 204, 375, 668
Hin1I GRCGYC 1 cut(s) 741
Hin1II CATG 5 cut(s) 55, 112, 548, 773, 790
Hin6I GCGC 3 cut(s) 202, 373, 666
HinP1I GCGC 3 cut(s) 202, 373, 666
HinfI GANTC 6 cut(s) 337, 404, 425, 442, 555, 716
HpaII CCGG 3 cut(s) 269, 657, 896
HphI GGTGA 5 cut(s) 83, 539, 590, 725, 770
Hpy166II GTNNAC 4 cut(s) 682, 706, 745, 808
Hpy188I TCNGA 8 cut(s) 86, 276, 447, 460, 739, 814, 840, 853
Hpy188III TCNNGA 4 cut(s) 64, 334, 500, 545
Hpy8I GTNNAC 4 cut(s) 682, 706, 745, 808
Hpy99I CGWCG 2 cut(s) 182, 632
HpyAV CCTTC 2 cut(s) 628, 683
HpyCH4III ACNGT 1 cut(s) 836
HpyCH4IV ACGT 4 cut(s) 78, 630, 702, 741
HpyCH4V TGCA 4 cut(s) 226, 307, 524, 786
HpyF10VI GCNNNNNNNGC 9 cut(s) 304, 370, 521, 660, 869, 872, 886, 889, 892
HpyF3I CTNAG 4 cut(s) 30, 477, 650, 696
HpySE526I ACGT 4 cut(s) 78, 630, 702, 741
Hsp92I GRCGYC 1 cut(s) 741
Hsp92II CATG 5 cut(s) 55, 112, 548, 773, 790
HspAI GCGC 3 cut(s) 202, 373, 666
Ksp22I TGATCA 4 cut(s) 73, 529, 591, 772
Kzo9I GATC 9 cut(s) 73, 95, 131, 271, 496, 529, 591, 643, 772
LguI GCTCTTC 1 cut(s) 233
LmnI GCTCC 5 cut(s) 4, 265, 512, 659, 660
LweI GCATC 2 cut(s) 177, 235
MaeI CTAG 2 cut(s) 299, 794
MaeII ACGT 4 cut(s) 78, 630, 702, 741
MaeIII GTNAC 2 cut(s) 713, 842
MalI GATC 9 cut(s) 75, 97, 133, 273, 498, 531, 593, 645, 774
MbiI CCGCTC 1 cut(s) 663
MboI GATC 9 cut(s) 73, 95, 131, 271, 496, 529, 591, 643, 772
MboII GAAGA 6 cut(s) 208, 250, 289, 367, 560, 563
MhlI GDGCHC 2 cut(s) 349, 656
MlsI TGGCCA 1 cut(s) 290
MluCI AATT 3 cut(s) 102, 155, 748
MluNI TGGCCA 1 cut(s) 290
MlyI GAGTC 3 cut(s) 398, 549, 710
Mox20I TGGCCA 1 cut(s) 290
MscI TGGCCA 1 cut(s) 290
MslI CAYNNNNRTG 1 cut(s) 543
Msp20I TGGCCA 1 cut(s) 290
MspA1I CMGCKG 2 cut(s) 286, 711
MspI CCGG 3 cut(s) 269, 657, 896
MspR9I CCNGG 4 cut(s) 9, 561, 576, 658
MvaI CCWGG 3 cut(s) 9, 561, 576
MvnI CGCG 1 cut(s) 375
MwoI GCNNNNNNNGC 9 cut(s) 304, 370, 521, 660, 869, 872, 886, 889, 892
NciI CCSGG 1 cut(s) 658
NdeII GATC 9 cut(s) 73, 95, 131, 271, 496, 529, 591, 643, 772
NlaIII CATG 5 cut(s) 55, 112, 548, 773, 790
NlaIV GGNNCC 4 cut(s) 6, 267, 332, 806
NmeAIII GCCGAG 2 cut(s) 117, 241
NmuCI GTSAC 1 cut(s) 713
NspI RCATGY 1 cut(s) 55
PagI TCATGA 1 cut(s) 544
PaqCI CACCTGC 2 cut(s) 211, 515
PciI ACATGT 1 cut(s) 51
PciSI GCTCTTC 1 cut(s) 233
PcsI WCGNNNNNNNCGW 1 cut(s) 825
PfeI GAWTC 3 cut(s) 337, 425, 442
PflMI CCANNNNNTGG 1 cut(s) 787
PfoI TCCNGGA 1 cut(s) 656
Ple19I CGATCG 1 cut(s) 134
PleI GAGTC 3 cut(s) 398, 549, 710
PmaCI CACGTG 1 cut(s) 703
PmlI CACGTG 1 cut(s) 703
PpsI GAGTC 3 cut(s) 398, 549, 710
Ppu21I YACGTR 1 cut(s) 703
PscI ACATGT 1 cut(s) 51
Psp124BI GAGCTC 1 cut(s) 656
Psp6I CCWGG 3 cut(s) 7, 559, 574
PspCI CACGTG 1 cut(s) 703
PspGI CCWGG 3 cut(s) 7, 559, 574
PspN4I GGNNCC 4 cut(s) 6, 267, 332, 806
PspPI GGNCC 4 cut(s) 89, 692, 805, 930
PstI CTGCAG 1 cut(s) 309
PvuI CGATCG 1 cut(s) 134
PvuII CAGCTG 1 cut(s) 286
RsaI GTAC 1 cut(s) 161
RsaNI GTAC 1 cut(s) 160
RseI CAYNNNNRTG 1 cut(s) 543
SacI GAGCTC 1 cut(s) 656
SapI GCTCTTC 1 cut(s) 233
Sau3AI GATC 9 cut(s) 73, 95, 131, 271, 496, 529, 591, 643, 772
Sau96I GGNCC 4 cut(s) 89, 692, 805, 930
SchI GAGTC 3 cut(s) 398, 549, 710
ScrFI CCNGG 4 cut(s) 9, 561, 576, 658
SduI GDGCHC 2 cut(s) 349, 656
SfaNI GCATC 2 cut(s) 177, 235
SfcI CTRYAG 1 cut(s) 305
SinI GGWCC 2 cut(s) 805, 930
SmiMI CAYNNNNRTG 1 cut(s) 543
SmlI CTYRAG 2 cut(s) 368, 434
SmoI CTYRAG 2 cut(s) 368, 434
Sse9I AATT 3 cut(s) 102, 155, 748
SsiI CCGC 8 cut(s) 45, 205, 663, 711, 864, 867, 870, 873
SspI AATATT 1 cut(s) 173
SspMI CTAG 2 cut(s) 299, 794
SstI GAGCTC 1 cut(s) 656
StyD4I CCNGG 4 cut(s) 7, 559, 574, 656
TaaI ACNGT 1 cut(s) 836
TaiI ACGT 4 cut(s) 81, 633, 705, 744
TaqI TCGA 4 cut(s) 98, 122, 627, 911
TasI AATT 3 cut(s) 102, 155, 748
TauI GCSGC 7 cut(s) 48, 207, 666, 866, 869, 872, 875
TfiI GAWTC 3 cut(s) 337, 425, 442
TscAI CASTG 1 cut(s) 788
TseFI GTSAC 1 cut(s) 713
Tsp45I GTSAC 1 cut(s) 713
TspDTI ATGAA 1 cut(s) 168
TspGWI ACGGA 1 cut(s) 611
TspRI CASTG 1 cut(s) 788
Van91I CCANNNNNTGG 1 cut(s) 787
VpaK11BI GGWCC 2 cut(s) 805, 930
XagI CCTNNNNNAGG 1 cut(s) 33
XceI RCATGY 1 cut(s) 55
XspI CTAG 2 cut(s) 299, 794
ZraI GACGTC 1 cut(s) 742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.