AT5G37970

S-adenosylmethionine-dependent methyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
15123089 .. 15124435
1347 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G37970.1

Sequence Viewer

Length: 1089 bp
ATGCCAACATTTCCTCAATCGTTTCCAATGAACGGTGGTGATGGTCCGCACAGTTACATCCACAATTCTTCCTATCAAAAAGTGGCGATCGATGGCGTTAAAGAAAGGACAAGCGAAGCGATCTTAGAAAAACTCGATCTTGAATTCCTCAACCGTAACTCTGAAGAAAATATCTTGAGAATTGTGGATTTTGGTTGTTCCATTGGACCTAACACGTTTGATGTTGTCCAAAATATCATTGATACAGTGAAACAAAAACGCCTAAAAGAAAACAAAACCTATATTGGTGCTCCTCTTGAGTTCCAAGTATGCTTCAATGATCAACCAAACAATGATTTTAACACACTTTTTCGAACCCAACCGTTCTTTTCCCGGAAAGAATATTTTTCCGTGGGAGTTCCAGGCTCCTTCCATGGTAGAGTATTACCAAAAAATAGCCTCCATATAGGTCACACTTCCTATACACTCCACTGGCTTTCTAATGTTCCCCAACATGTTTGTGACAAGAAATCTCCGGCATTGAATAAAAGCTATATTCAATGTAATAATTTAGTAGATGAAGTGACCAAGGCTTACAAGATCCAGTTCAGAAAAGATTTTGGAGGATTTCTTGAGGCAAGGGCGGAAGAGCTTGTCTCGGGCGGATTGATGATCCTTTCAGGACAATGCTTGCCCGATGGTATCCCAAAGGCTTTGACATGGCAAGGTGTTGTGATCGATATGATTGGAGATTGTCTTATGGATCTGGCTAAATTGGGAATAACAAGCAAGGAAAAGATCGAACTGTTCAGTTTACCCACATACATTCCGCATATTAGTGAATTCAAGGCAAACATTGAACAAAATGAAAACTTTAATGTCGAGACAATGGAGGAGATAAGTCATCCTATGGATTATATGCCATTAACCAACGACTTCATCACTTCCATGTTTCGAGCCATTCTCAATACAATTATCGAAGAACACTTTGGAGAAGGTGTGGTCAACGAGCTATTCAGTCGACTTGCTAAAAGGCTCGACAAGTACCCAATTGATTTCAAAAGGTGTAAAAAGTATGTGAACTATTTTATCGTGCTTAAGAGAAAGTGA

Protein Analysis

362

Amino Acids

41.41

Weight (kDa)

6.38

Isoelectric Point (pI)

42.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_7 PF03492 52 - 361 1.1e-99 SAM dependent carboxyl methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000151)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G37970 AT5G37990 AT5G38100 AT5G38100 AT5G38100 AT5G38100 AT5G38780 AT5G38780
fragaria_vesca FvH4_4g07940 FvH4_4g07950 FvH4_5g16970 FvH4_7g18490
malus_domestica MD02G1312100.v1.1 MD02G1312500.v1.1 MD05G1007900.v1.1 MD06G1223300.v1.1 MD06G1223500.v1.1 MD06G1223600.v1.1 MD06G1223700.v1.1 MD06G1223800.v1.1 MD06G1227300.v1.1 MD09G1253900.v1.1 MD09G1254000.v1.1 MD09G1254100.v1.1 MD09G1254200.v1.1 MD09G1254300.v1.1 MD10G1005200.v1.1 MD10G1005900.v1.1 MD14G1232400.v1.1 MD14G1232700.v1.1 MD14G1232800.v1.1 MD14G1232900.v1.1 MD14G1233000.v1.1 MD15G1255300.v1.1
prunus_persica Prupe.5G228400_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228600_v2.0.a1 Prupe.5G228700_v2.0.a1 Prupe.5G228800_v2.0.a1 Prupe.5G228900_v2.0.a1 Prupe.5G229000_v2.0.a1 Prupe.8G008300_v2.0.a1
pyrus_communis pycom02g26200 pycom02g26220 pycom05g00410 pycom06g19910 pycom06g19920 pycom06g19930 pycom06g19940 pycom06g20380 pycom09g16970 pycom09g16990 pycom09g17000 pycom10g00420 pycom14g19370 pycom14g19380 pycom14g19420 pycom14g19430 pycom15g22380 pycom15g22390
rosa_chinensis RchiOBHm_Chr1g0327241 RchiOBHm_Chr1g0327261 RchiOBHm_Chr2g0128631 RchiOBHm_Chr2g0137031 RchiOBHm_Chr3g0486031 RchiOBHm_Chr3g0486051 RchiOBHm_Chr3g0486091 RchiOBHm_Chr4g0400921 RchiOBHm_Chr4g0400971 RchiOBHm_Chr4g0400991 RchiOBHm_Chr7g0178281 RchiOBHm_Chr7g0178301 RchiOBHm_Chr7g0178321 RchiOBHm_Chr7g0178951 RchiOBHm_Chr7g0178961 RchiOBHm_Chr7g0178971 RchiOBHm_Chr7g0178991 RchiOBHm_Chr7g0179001 RchiOBHm_Chr7g0179021 RchiOBHm_Chr7g0179031 RchiOBHm_Chr7g0179041 RchiOBHm_Chr7g0179051 RchiOBHm_Chr7g0187641 RchiOBHm_Chr7g0201881 RchiOBHm_Chr7g0201901
rosa_laevigata RLG00000005390 RLG00000005391 RLG00000005392 RLG00000005394 RLG00000005456 RLG00000009163 RLG00000009164 RLG00000019598 RLG00000023105 RLG00000030028
rosa_multiflora Rmu_co8337425.1_g000001 Rmu_sc0000795.1_g000125 Rmu_sc0000837.1_g000085 Rmu_sc0000888.1_g000008 Rmu_sc0000888.1_g000010 Rmu_sc0000888.1_g000011 Rmu_sc0000888.1_g000013 Rmu_sc0001021.1_g000003 Rmu_sc0001021.1_g000004 Rmu_sc0001021.1_g000006 Rmu_sc0001374.1_g000046 Rmu_sc0002026.1_g000007 Rmu_sc0002026.1_g000019 Rmu_sc0003465.1_g000046 Rmu_sc0004483.1_g000006 Rmu_sc0006229.1_g000002 Rmu_sc0006736.1_g000019 Rmu_sc0006736.1_g000027 Rmu_sc0007073.1_g000003 Rmu_sc0036373.1_g000001 Rmu_ssc0000009.1_g000007
rosa_roxburghii Rroxscaffold_2G00107760 Rroxscaffold_2G00115440 Rroxscaffold_2G00115920 Rroxscaffold_3G00255030 Rroxscaffold_3G00267200 Rroxscaffold_3G00274440 Rroxscaffold_3G00274450 Rroxscaffold_3G00274480 Rroxscaffold_4G00322940 Rroxscaffold_4G00322950 Rroxscaffold_4G00322980 Rroxscaffold_4G00323000 Rroxscaffold_4G00323020 Rroxscaffold_5G00345860 Rroxscaffold_5G00345890 Rroxscaffold_5G00345920 Rroxscaffold_6G00396060 Rroxscaffold_6G00396070
rosa_rugosa Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064800 Rorug01G0297000 Rorug02G0279500 Rorug02G0337300 Rorug03G0223300 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223500 Rorug03G0223600 Rorug04G0027400 Rorug04G0027500 Rorug04G0027600 Rorug06G0420600 Rorug06G0420600 Rorug06G0483400 Rorug07G0066400 Rorug07G0066600
rosa_samantha Rh1AG081900 Rh1AG082300 Rh1AG082400 Rh1AG305600 Rh2BG340800 Rh2BG393000 Rh3BG308300 Rh4CG113300 Rh4CG113700 Rh7CG020600 Rh7CG020700 Rh7CG020800 Rh7CG021000 Rh7CG088900 Rh7CG204900
rosa_wichuraiana Rw0G002670 Rw0G014940 Rw0G021450 Rw1G006470 Rw1G006490 Rw2G026880 Rw2G027140 Rw2G031610 Rw3G024210 Rw3G024220 Rw7G001620 Rw7G001630 Rw7G001640 Rw7G001650 Rw7G016930 Rw7G016950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1000
AciI CCGC 4 cut(s) 47, 623, 642, 809
AclWI GGATC 3 cut(s) 574, 646, 750
AcsI RAATTY 2 cut(s) 143, 821
AcuI CTGAAG 1 cut(s) 183
AfaI GTAC 1 cut(s) 1025
AfiI CCNNNNNNNGG 1 cut(s) 32
AflII CTTAAG 1 cut(s) 1076
AflIII ACRYGT 2 cut(s) 213, 493
AgsI TTSAA 7 cut(s) 143, 316, 523, 539, 826, 839, 1039
AjnI CCWGG 1 cut(s) 400
AjuI GAANNNNNNNTTGG 2 cut(s) 951, 983
AluBI AGCT 3 cut(s) 531, 631, 991
AluI AGCT 3 cut(s) 531, 631, 991
Alw21I GWGCWC 1 cut(s) 292
Alw26I GTCTC 2 cut(s) 640, 857
AlwI GGATC 3 cut(s) 574, 646, 750
Ama87I CYCGRG 1 cut(s) 637
ApoI RAATTY 2 cut(s) 143, 821
AspS9I GGNCC 2 cut(s) 44, 206
AsuC2I CCSGG 1 cut(s) 373
AsuHPI GGTGA 1 cut(s) 50
AsuII TTCGAA 1 cut(s) 352
AvaI CYCGRG 1 cut(s) 637
AvaII GGWCC 2 cut(s) 44, 206
Bbv12I GWGCWC 1 cut(s) 292
BccI CCATC 3 cut(s) 35, 86, 671
BciT130I CCWGG 1 cut(s) 402
BciVI GTATCC 1 cut(s) 692
BclI TGATCA 1 cut(s) 319
BcnI CCSGG 1 cut(s) 373
BcoDI GTCTC 2 cut(s) 640, 857
BfrI CTTAAG 1 cut(s) 1076
BfuI GTATCC 1 cut(s) 692
Bme1390I CCNGG 2 cut(s) 373, 402
Bme18I GGWCC 2 cut(s) 44, 206
BmeT110I CYCGRG 1 cut(s) 637
BmgT120I GGNCC 2 cut(s) 44, 206
BmiI GGNNCC 1 cut(s) 406
BmrFI CCNGG 2 cut(s) 373, 402
BplI GAGNNNNNCTC 4 cut(s) 620, 652, 927, 959
Bpu14I TTCGAA 1 cut(s) 352
BpuEI CTTGAG 3 cut(s) 196, 317, 632
BpuMI CCSGG 1 cut(s) 373
Bsa29I ATCGAT 2 cut(s) 90, 717
BsaJI CCNNGG 3 cut(s) 390, 412, 567
BsaXI ACNNNNNCTCC 2 cut(s) 963, 993
Bsc4I CCNNNNNNNGG 1 cut(s) 32
Bse1I ACTGG 2 cut(s) 476, 583
BseBI CCWGG 1 cut(s) 402
BseCI ATCGAT 2 cut(s) 90, 717
BseDI CCNNGG 3 cut(s) 390, 412, 567
BseGI GGATG 2 cut(s) 57, 883
BseLI CCNNNNNNNGG 1 cut(s) 32
BseNI ACTGG 2 cut(s) 476, 583
BseRI GAGGAG 2 cut(s) 282, 887
Bsh1285I CGRYCG 1 cut(s) 90
BshVI ATCGAT 2 cut(s) 90, 717
BsiEI CGRYCG 1 cut(s) 90
BsiHKAI GWGCWC 1 cut(s) 292
BsiHKCI CYCGRG 1 cut(s) 637
BsiSI CCGG 2 cut(s) 373, 515
BslI CCNNNNNNNGG 1 cut(s) 32
BsmAI GTCTC 2 cut(s) 640, 857
BsoBI CYCGRG 1 cut(s) 637
Bsp119I TTCGAA 1 cut(s) 352
Bsp1286I GDGCHC 1 cut(s) 292
Bsp143I GATC 9 cut(s) 87, 120, 136, 319, 579, 651, 714, 742, 777
Bsp19I CCATGG 1 cut(s) 412
BspACI CCGC 4 cut(s) 47, 623, 642, 809
BspDI ATCGAT 2 cut(s) 90, 717
BspLI GGNNCC 1 cut(s) 406
BspPI GGATC 3 cut(s) 574, 646, 750
BspQI GCTCTTC 1 cut(s) 621
BspT104I TTCGAA 1 cut(s) 352
BspTI CTTAAG 1 cut(s) 1076
BsrI ACTGG 2 cut(s) 476, 583
BssECI CCNNGG 3 cut(s) 390, 412, 567
BssMI GATC 9 cut(s) 87, 120, 136, 319, 579, 651, 714, 742, 777
BssT1I CCWWGG 2 cut(s) 412, 567
Bst2UI CCWGG 1 cut(s) 402
Bst4CI ACNGT 6 cut(s) 35, 53, 155, 247, 363, 786
Bst6I CTCTTC 1 cut(s) 621
BstAFI CTTAAG 1 cut(s) 1076
BstBI TTCGAA 1 cut(s) 352
BstC8I GCNNGC 1 cut(s) 671
BstDEI CTNAG 1 cut(s) 124
BstDSI CCRYGG 2 cut(s) 390, 412
BstF5I GGATG 2 cut(s) 57, 883
BstKTI GATC 9 cut(s) 90, 123, 139, 322, 582, 654, 717, 745, 780
BstMAI GTCTC 2 cut(s) 640, 857
BstMBI GATC 9 cut(s) 87, 120, 136, 319, 579, 651, 714, 742, 777
BstMCI CGRYCG 1 cut(s) 90
BstNI CCWGG 1 cut(s) 402
BstNSI RCATGY 1 cut(s) 497
BstSCI CCNGG 2 cut(s) 371, 400
BstX2I RGATCY 2 cut(s) 579, 742
BstYI RGATCY 2 cut(s) 579, 742
Bsu15I ATCGAT 2 cut(s) 90, 717
BsuI GTATCC 1 cut(s) 692
BsuTUI ATCGAT 2 cut(s) 90, 717
BtgI CCRYGG 2 cut(s) 390, 412
BtsCI GGATG 2 cut(s) 57, 883
BtsIMutI CAGTG 2 cut(s) 252, 469
Cac8I GCNNGC 1 cut(s) 671
Cfr13I GGNCC 2 cut(s) 44, 206
ClaI ATCGAT 2 cut(s) 90, 717
Csp6I GTAC 1 cut(s) 1024
CviAII CATG 4 cut(s) 413, 494, 699, 928
CviQI GTAC 1 cut(s) 1024
DdeI CTNAG 1 cut(s) 124
DpnI GATC 9 cut(s) 89, 122, 138, 321, 581, 653, 716, 744, 779
DpnII GATC 9 cut(s) 87, 120, 136, 319, 579, 651, 714, 742, 777
Eam1104I CTCTTC 1 cut(s) 621
EarI CTCTTC 1 cut(s) 621
EciI GGCGGA 2 cut(s) 638, 657
Eco130I CCWWGG 2 cut(s) 412, 567
Eco47I GGWCC 2 cut(s) 44, 206
Eco57I CTGAAG 1 cut(s) 183
Eco88I CYCGRG 1 cut(s) 637
EcoRI GAATTC 2 cut(s) 143, 821
EcoRII CCWGG 1 cut(s) 400
EcoT14I CCWWGG 2 cut(s) 412, 567
ErhI CCWWGG 2 cut(s) 412, 567
FaeI CATG 4 cut(s) 416, 497, 702, 931
FatI CATG 4 cut(s) 412, 493, 698, 927
FbaI TGATCA 1 cut(s) 319
FblI GTMKAC 1 cut(s) 1000
FokI GGATG 2 cut(s) 44, 870
HapII CCGG 2 cut(s) 373, 515
Hin1II CATG 4 cut(s) 416, 497, 702, 931
HincII GTYRAC 2 cut(s) 985, 1001
HindII GTYRAC 2 cut(s) 985, 1001
HpaII CCGG 2 cut(s) 373, 515
HphI GGTGA 1 cut(s) 50
Hpy166II GTNNAC 4 cut(s) 794, 985, 1001, 1060
Hpy188I TCNGA 2 cut(s) 163, 590
Hpy188III TCNNGA 6 cut(s) 140, 175, 296, 611, 660, 862
Hpy8I GTNNAC 4 cut(s) 794, 985, 1001, 1060
HpyAV CCTTC 2 cut(s) 418, 968
HpyCH4III ACNGT 6 cut(s) 35, 53, 155, 247, 363, 786
HpyCH4IV ACGT 1 cut(s) 215
HpyF3I CTNAG 1 cut(s) 124
HpySE526I ACGT 1 cut(s) 215
Hsp92II CATG 4 cut(s) 416, 497, 702, 931
Ksp22I TGATCA 1 cut(s) 319
Kzo9I GATC 9 cut(s) 87, 120, 136, 319, 579, 651, 714, 742, 777
LguI GCTCTTC 1 cut(s) 621
LmnI GCTCC 2 cut(s) 295, 410
LpnPI CCDG 8 cut(s) 386, 387, 414, 457, 528, 596, 645, 731
MaeII ACGT 1 cut(s) 215
MaeIII GTNAC 5 cut(s) 53, 155, 449, 500, 562
MalI GATC 9 cut(s) 89, 122, 138, 321, 581, 653, 716, 744, 779
MboI GATC 9 cut(s) 87, 120, 136, 319, 579, 651, 714, 742, 777
MboII GAAGA 4 cut(s) 60, 176, 638, 971
MfeI CAATTG 1 cut(s) 1029
MflI RGATCY 2 cut(s) 579, 742
MhlI GDGCHC 1 cut(s) 292
MluCI AATT 8 cut(s) 64, 143, 180, 547, 752, 821, 951, 1029
MnlI CCTC 7 cut(s) 24, 158, 303, 449, 596, 607, 865
MseI TTAA 5 cut(s) 99, 339, 855, 905, 1077
MslI CAYNNNNRTG 3 cut(s) 498, 816, 926
MspCI CTTAAG 1 cut(s) 1076
MspI CCGG 2 cut(s) 373, 515
MspR9I CCNGG 2 cut(s) 373, 402
MunI CAATTG 1 cut(s) 1029
MvaI CCWGG 1 cut(s) 402
NciI CCSGG 1 cut(s) 373
NcoI CCATGG 1 cut(s) 412
NdeII GATC 9 cut(s) 87, 120, 136, 319, 579, 651, 714, 742, 777
NlaIII CATG 4 cut(s) 416, 497, 702, 931
NlaIV GGNNCC 1 cut(s) 406
NmuCI GTSAC 3 cut(s) 449, 500, 562
NspI RCATGY 1 cut(s) 497
NspV TTCGAA 1 cut(s) 352
PciI ACATGT 1 cut(s) 493
PciSI GCTCTTC 1 cut(s) 621
PfoI TCCNGGA 1 cut(s) 371
Ple19I CGATCG 1 cut(s) 90
PscI ACATGT 1 cut(s) 493
Psp6I CCWGG 1 cut(s) 400
PspGI CCWGG 1 cut(s) 400
PspN4I GGNNCC 1 cut(s) 406
PspPI GGNCC 2 cut(s) 44, 206
PsuI RGATCY 2 cut(s) 579, 742
PvuI CGATCG 1 cut(s) 90
RsaI GTAC 1 cut(s) 1025
RsaNI GTAC 1 cut(s) 1024
RseI CAYNNNNRTG 3 cut(s) 498, 816, 926
SalI GTCGAC 1 cut(s) 999
SapI GCTCTTC 1 cut(s) 621
SaqAI TTAA 5 cut(s) 99, 339, 855, 905, 1077
Sau3AI GATC 9 cut(s) 87, 120, 136, 319, 579, 651, 714, 742, 777
Sau96I GGNCC 2 cut(s) 44, 206
ScrFI CCNGG 2 cut(s) 373, 402
SduI GDGCHC 1 cut(s) 292
SfuI TTCGAA 1 cut(s) 352
SinI GGWCC 2 cut(s) 44, 206
SmiMI CAYNNNNRTG 3 cut(s) 498, 816, 926
SmlI CTYRAG 4 cut(s) 175, 296, 611, 1076
SmoI CTYRAG 4 cut(s) 175, 296, 611, 1076
Sse9I AATT 8 cut(s) 64, 143, 180, 547, 752, 821, 951, 1029
SsiI CCGC 4 cut(s) 47, 623, 642, 809
SspI AATATT 1 cut(s) 383
StyD4I CCNGG 2 cut(s) 371, 400
StyI CCWWGG 2 cut(s) 412, 567
TaaI ACNGT 6 cut(s) 35, 53, 155, 247, 363, 786
TaiI ACGT 1 cut(s) 218
TasI AATT 8 cut(s) 64, 143, 180, 547, 752, 821, 951, 1029
Tru1I TTAA 5 cut(s) 99, 339, 855, 905, 1077
Tru9I TTAA 5 cut(s) 99, 339, 855, 905, 1077
TscAI CASTG 2 cut(s) 252, 476
TseFI GTSAC 3 cut(s) 449, 500, 562
Tsp45I GTSAC 3 cut(s) 449, 500, 562
TspDTI ATGAA 4 cut(s) 44, 573, 861, 907
TspGWI ACGGA 1 cut(s) 379
TspRI CASTG 2 cut(s) 252, 476
Vha464I CTTAAG 1 cut(s) 1076
VpaK11BI GGWCC 2 cut(s) 44, 206
XapI RAATTY 2 cut(s) 143, 821
XceI RCATGY 1 cut(s) 497
XmiI GTMKAC 1 cut(s) 1000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.