AT5G37990

S-adenosylmethionine-dependent methyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
15133867 .. 15135169
1303 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G37990.1

Sequence Viewer

Length: 1089 bp
ATGCCAACATTTCCTCAATCGTTTCCTATGAACGGTGGTGATGGTCCGCACAGTTACATCCACAATTCCTCTTATCAAAAAGTAGCGATAGATGGCGCTAAAGAAAAGACAAGTGAAGCCATCCTAAAAAACCTCGATCTCGAACTCTTGAACCGTAATTCTGATGAAAATATCTTAAGAATTGCGGATTTTGGTTGTTCTATTGGACCCAACACGTTCGAAGTAGTCCAAAATATTATCGATACGGTGAAGCAAAAAAACCTAAAAGAAAACAATGCCTATATTGGTGCTCCTCTCGAGTTCCAAGTTTGCTTCAATGATCAACCAAACAATGATTTTAACACACTTTTTAGAACCCAACCTATCTCTTCCAAACAAGCATATTTATCGGTTGGAGTTCCAGGATCTTTCCATGGTAGAGTATTACCAAAAAATAGCCTCCATATCGGTCACATTACCTATGCGCTCCACTGGCTTTCTACAGTTCCCCAACATGTTTGCGACAAGAAATCTCCGGCATTGAATAAAAGCTACATTCAATGTAATAATTTAGTAGAGGAAGTGACTGAAGCTTACCGGGTCCAGTTTAAAAAGGACATGGGAGATTTTCTTGGGGCAAGAGCTGAAGAGCTTGTTTCGGGCGGATTGATGATCCTATCAGGACAATGCTTGCCCGATGGTGTCCCTAAGGCTTTGACATGGCAAGGGGTTGTGATCGATATGATTGGAGATTGTCTTATGGATATGGCTAAACAGGGAATTACGACCAAGGAAAAGATCGAACTGTTCAGTTTGCCCATATATATTCCGCATATTAGTGAATTCAAGGCAGAAATAGAGCGAAATGAAAACTTTAGTATCGAGACAATGGAGAAGATAAGTCATCCTATGGATTATAAGCCACTAACCAACGACTTCATCACTTCCATGTTTCGAGCCATTCTCAATACGATTATTGAAGAACACTTTGGAGATGGTGTGGTCAATGAGCTATTCGATCGATTTGCTAAGAAGCTCAACAAGTACCCAATTGATTTCAAAAGGTGTAAAAAGTATGTGAATTATTTTATCGTGCTTAAAAGAAAATAA

Protein Analysis

362

Amino Acids

41.02

Weight (kDa)

6.38

Isoelectric Point (pI)

39.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_7 PF03492 52 - 361 4.5e-101 SAM dependent carboxyl methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000151)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G37970 AT5G37990 AT5G38100 AT5G38100 AT5G38100 AT5G38100 AT5G38780 AT5G38780
fragaria_vesca FvH4_4g07940 FvH4_4g07950 FvH4_5g16970 FvH4_7g18490
malus_domestica MD02G1312100.v1.1 MD02G1312500.v1.1 MD05G1007900.v1.1 MD06G1223300.v1.1 MD06G1223500.v1.1 MD06G1223600.v1.1 MD06G1223700.v1.1 MD06G1223800.v1.1 MD06G1227300.v1.1 MD09G1253900.v1.1 MD09G1254000.v1.1 MD09G1254100.v1.1 MD09G1254200.v1.1 MD09G1254300.v1.1 MD10G1005200.v1.1 MD10G1005900.v1.1 MD14G1232400.v1.1 MD14G1232700.v1.1 MD14G1232800.v1.1 MD14G1232900.v1.1 MD14G1233000.v1.1 MD15G1255300.v1.1
prunus_persica Prupe.5G228400_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228600_v2.0.a1 Prupe.5G228700_v2.0.a1 Prupe.5G228800_v2.0.a1 Prupe.5G228900_v2.0.a1 Prupe.5G229000_v2.0.a1 Prupe.8G008300_v2.0.a1
pyrus_communis pycom02g26200 pycom02g26220 pycom05g00410 pycom06g19910 pycom06g19920 pycom06g19930 pycom06g19940 pycom06g20380 pycom09g16970 pycom09g16990 pycom09g17000 pycom10g00420 pycom14g19370 pycom14g19380 pycom14g19420 pycom14g19430 pycom15g22380 pycom15g22390
rosa_chinensis RchiOBHm_Chr1g0327241 RchiOBHm_Chr1g0327261 RchiOBHm_Chr2g0128631 RchiOBHm_Chr2g0137031 RchiOBHm_Chr3g0486031 RchiOBHm_Chr3g0486051 RchiOBHm_Chr3g0486091 RchiOBHm_Chr4g0400921 RchiOBHm_Chr4g0400971 RchiOBHm_Chr4g0400991 RchiOBHm_Chr7g0178281 RchiOBHm_Chr7g0178301 RchiOBHm_Chr7g0178321 RchiOBHm_Chr7g0178951 RchiOBHm_Chr7g0178961 RchiOBHm_Chr7g0178971 RchiOBHm_Chr7g0178991 RchiOBHm_Chr7g0179001 RchiOBHm_Chr7g0179021 RchiOBHm_Chr7g0179031 RchiOBHm_Chr7g0179041 RchiOBHm_Chr7g0179051 RchiOBHm_Chr7g0187641 RchiOBHm_Chr7g0201881 RchiOBHm_Chr7g0201901
rosa_laevigata RLG00000005390 RLG00000005391 RLG00000005392 RLG00000005394 RLG00000005456 RLG00000009163 RLG00000009164 RLG00000019598 RLG00000023105 RLG00000030028
rosa_multiflora Rmu_co8337425.1_g000001 Rmu_sc0000795.1_g000125 Rmu_sc0000837.1_g000085 Rmu_sc0000888.1_g000008 Rmu_sc0000888.1_g000010 Rmu_sc0000888.1_g000011 Rmu_sc0000888.1_g000013 Rmu_sc0001021.1_g000003 Rmu_sc0001021.1_g000004 Rmu_sc0001021.1_g000006 Rmu_sc0001374.1_g000046 Rmu_sc0002026.1_g000007 Rmu_sc0002026.1_g000019 Rmu_sc0003465.1_g000046 Rmu_sc0004483.1_g000006 Rmu_sc0006229.1_g000002 Rmu_sc0006736.1_g000019 Rmu_sc0006736.1_g000027 Rmu_sc0007073.1_g000003 Rmu_sc0036373.1_g000001 Rmu_ssc0000009.1_g000007
rosa_roxburghii Rroxscaffold_2G00107760 Rroxscaffold_2G00115440 Rroxscaffold_2G00115920 Rroxscaffold_3G00255030 Rroxscaffold_3G00267200 Rroxscaffold_3G00274440 Rroxscaffold_3G00274450 Rroxscaffold_3G00274480 Rroxscaffold_4G00322940 Rroxscaffold_4G00322950 Rroxscaffold_4G00322980 Rroxscaffold_4G00323000 Rroxscaffold_4G00323020 Rroxscaffold_5G00345860 Rroxscaffold_5G00345890 Rroxscaffold_5G00345920 Rroxscaffold_6G00396060 Rroxscaffold_6G00396070
rosa_rugosa Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064800 Rorug01G0297000 Rorug02G0279500 Rorug02G0337300 Rorug03G0223300 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223500 Rorug03G0223600 Rorug04G0027400 Rorug04G0027500 Rorug04G0027600 Rorug06G0420600 Rorug06G0420600 Rorug06G0483400 Rorug07G0066400 Rorug07G0066600
rosa_samantha Rh1AG081900 Rh1AG082300 Rh1AG082400 Rh1AG305600 Rh2BG340800 Rh2BG393000 Rh3BG308300 Rh4CG113300 Rh4CG113700 Rh7CG020600 Rh7CG020700 Rh7CG020800 Rh7CG021000 Rh7CG088900 Rh7CG204900
rosa_wichuraiana Rw0G002670 Rw0G014940 Rw0G021450 Rw1G006470 Rw1G006490 Rw2G026880 Rw2G027140 Rw2G031610 Rw3G024210 Rw3G024220 Rw7G001620 Rw7G001630 Rw7G001640 Rw7G001650 Rw7G016930 Rw7G016950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 897
AciI CCGC 4 cut(s) 47, 185, 642, 809
AclWI GGATC 2 cut(s) 412, 646
AcsI RAATTY 1 cut(s) 821
AcuI CTGAAG 2 cut(s) 588, 645
AfaI GTAC 1 cut(s) 1025
AfiI CCNNNNNNNGG 1 cut(s) 32
AflII CTTAAG 1 cut(s) 175
AflIII ACRYGT 2 cut(s) 213, 493
AgsI TTSAA 7 cut(s) 151, 316, 523, 539, 826, 959, 1039
AjnI CCWGG 1 cut(s) 400
AjuI GAANNNNNNNTTGG 2 cut(s) 951, 983
AluBI AGCT 6 cut(s) 531, 572, 623, 631, 991, 1015
AluI AGCT 6 cut(s) 531, 572, 623, 631, 991, 1015
Alw21I GWGCWC 1 cut(s) 292
Alw26I GTCTC 1 cut(s) 857
AlwI GGATC 2 cut(s) 412, 646
Ama87I CYCGRG 1 cut(s) 296
ApoI RAATTY 1 cut(s) 821
AspLEI GCGC 2 cut(s) 98, 466
AspS9I GGNCC 3 cut(s) 44, 206, 580
AsuC2I CCSGG 1 cut(s) 578
AsuHPI GGTGA 2 cut(s) 50, 259
AsuII TTCGAA 1 cut(s) 219
AvaI CYCGRG 1 cut(s) 296
AvaII GGWCC 3 cut(s) 44, 206, 580
AxyI CCTNAGG 1 cut(s) 687
BaeI ACNNNNGTAYC 2 cut(s) 841, 874
Bbv12I GWGCWC 1 cut(s) 292
BccI CCATC 5 cut(s) 35, 86, 128, 671, 968
BcgI CGANNNNNNTGC 4 cut(s) 369, 403, 986, 1020
BciT130I CCWGG 1 cut(s) 402
BclI TGATCA 1 cut(s) 319
BcnI CCSGG 1 cut(s) 578
BcoDI GTCTC 1 cut(s) 857
BfmI CTRYAG 1 cut(s) 480
BfoI RGCGCY 1 cut(s) 99
BfrI CTTAAG 1 cut(s) 175
Bme1390I CCNGG 2 cut(s) 402, 578
Bme18I GGWCC 3 cut(s) 44, 206, 580
BmeT110I CYCGRG 1 cut(s) 296
BmgT120I GGNCC 3 cut(s) 44, 206, 580
BmiI GGNNCC 2 cut(s) 208, 581
BmrFI CCNGG 2 cut(s) 402, 578
BplI GAGNNNNNCTC 2 cut(s) 927, 959
Bpu14I TTCGAA 1 cut(s) 219
BpuMI CCSGG 1 cut(s) 578
Bsa29I ATCGAT 3 cut(s) 240, 717, 1000
BsaJI CCNNGG 2 cut(s) 412, 768
BsaXI ACNNNNNCTCC 2 cut(s) 963, 993
Bsc4I CCNNNNNNNGG 1 cut(s) 32
Bse1I ACTGG 2 cut(s) 476, 583
Bse21I CCTNAGG 1 cut(s) 687
BseBI CCWGG 1 cut(s) 402
BseCI ATCGAT 3 cut(s) 240, 717, 1000
BseDI CCNNGG 2 cut(s) 412, 768
BseGI GGATG 3 cut(s) 57, 120, 883
BseLI CCNNNNNNNGG 1 cut(s) 32
BseNI ACTGG 2 cut(s) 476, 583
BseRI GAGGAG 1 cut(s) 282
Bsh1285I CGRYCG 1 cut(s) 1000
BshVI ATCGAT 3 cut(s) 240, 717, 1000
BsiEI CGRYCG 1 cut(s) 1000
BsiHKAI GWGCWC 1 cut(s) 292
BsiHKCI CYCGRG 1 cut(s) 296
BsiSI CCGG 2 cut(s) 515, 577
BslFI GGGAC 1 cut(s) 668
BslI CCNNNNNNNGG 1 cut(s) 32
BsmAI GTCTC 1 cut(s) 857
BsmFI GGGAC 1 cut(s) 668
BsoBI CYCGRG 1 cut(s) 296
Bsp119I TTCGAA 1 cut(s) 219
Bsp1286I GDGCHC 1 cut(s) 292
Bsp143I GATC 7 cut(s) 136, 319, 404, 651, 714, 777, 997
Bsp19I CCATGG 1 cut(s) 412
BspACI CCGC 4 cut(s) 47, 185, 642, 809
BspDI ATCGAT 3 cut(s) 240, 717, 1000
BspLI GGNNCC 2 cut(s) 208, 581
BspPI GGATC 2 cut(s) 412, 646
BspQI GCTCTTC 1 cut(s) 621
BspT104I TTCGAA 1 cut(s) 219
BspTI CTTAAG 1 cut(s) 175
BsrI ACTGG 2 cut(s) 476, 583
BssECI CCNNGG 2 cut(s) 412, 768
BssMI GATC 7 cut(s) 136, 319, 404, 651, 714, 777, 997
BssT1I CCWWGG 2 cut(s) 412, 768
Bst2UI CCWGG 1 cut(s) 402
Bst4CI ACNGT 6 cut(s) 35, 53, 155, 247, 484, 786
Bst6I CTCTTC 2 cut(s) 373, 621
BstAFI CTTAAG 1 cut(s) 175
BstBI TTCGAA 1 cut(s) 219
BstC8I GCNNGC 1 cut(s) 671
BstDEI CTNAG 2 cut(s) 687, 1008
BstDSI CCRYGG 1 cut(s) 412
BstF5I GGATG 3 cut(s) 57, 120, 883
BstH2I RGCGCY 1 cut(s) 99
BstHHI GCGC 2 cut(s) 98, 466
BstKTI GATC 7 cut(s) 139, 322, 407, 654, 717, 780, 1000
BstMAI GTCTC 1 cut(s) 857
BstMBI GATC 7 cut(s) 136, 319, 404, 651, 714, 777, 997
BstMCI CGRYCG 1 cut(s) 1000
BstMWI GCNNNNNNNGC 1 cut(s) 472
BstNI CCWGG 1 cut(s) 402
BstNSI RCATGY 1 cut(s) 497
BstSCI CCNGG 2 cut(s) 400, 576
BstSFI CTRYAG 1 cut(s) 480
BstX2I RGATCY 1 cut(s) 404
BstYI RGATCY 1 cut(s) 404
Bsu15I ATCGAT 3 cut(s) 240, 717, 1000
Bsu36I CCTNAGG 1 cut(s) 687
BsuTUI ATCGAT 3 cut(s) 240, 717, 1000
BtgI CCRYGG 1 cut(s) 412
BtsCI GGATG 3 cut(s) 57, 120, 883
BtsIMutI CAGTG 1 cut(s) 469
Cac8I GCNNGC 1 cut(s) 671
CfoI GCGC 2 cut(s) 98, 466
Cfr13I GGNCC 3 cut(s) 44, 206, 580
ClaI ATCGAT 3 cut(s) 240, 717, 1000
Csp6I GTAC 1 cut(s) 1024
CviAII CATG 5 cut(s) 413, 494, 598, 699, 928
CviQI GTAC 1 cut(s) 1024
DdeI CTNAG 2 cut(s) 687, 1008
DpnI GATC 7 cut(s) 138, 321, 406, 653, 716, 779, 999
DpnII GATC 7 cut(s) 136, 319, 404, 651, 714, 777, 997
DraI TTTAAA 1 cut(s) 589
Eam1104I CTCTTC 2 cut(s) 373, 621
EarI CTCTTC 2 cut(s) 373, 621
EciI GGCGGA 1 cut(s) 657
Eco130I CCWWGG 2 cut(s) 412, 768
Eco47I GGWCC 3 cut(s) 44, 206, 580
Eco57I CTGAAG 2 cut(s) 588, 645
Eco81I CCTNAGG 1 cut(s) 687
Eco88I CYCGRG 1 cut(s) 296
EcoRI GAATTC 1 cut(s) 821
EcoRII CCWGG 1 cut(s) 400
EcoT14I CCWWGG 2 cut(s) 412, 768
ErhI CCWWGG 2 cut(s) 412, 768
FaeI CATG 5 cut(s) 416, 497, 601, 702, 931
FaqI GGGAC 1 cut(s) 668
FatI CATG 5 cut(s) 412, 493, 597, 698, 927
FbaI TGATCA 1 cut(s) 319
FokI GGATG 3 cut(s) 44, 107, 870
GlaI GCGC 2 cut(s) 97, 465
HaeII RGCGCY 1 cut(s) 99
HapII CCGG 2 cut(s) 515, 577
HhaI GCGC 2 cut(s) 98, 466
Hin1II CATG 5 cut(s) 416, 497, 601, 702, 931
Hin6I GCGC 2 cut(s) 96, 464
HinP1I GCGC 2 cut(s) 96, 464
HindIII AAGCTT 1 cut(s) 570
HpaII CCGG 2 cut(s) 515, 577
HphI GGTGA 2 cut(s) 50, 259
Hpy188I TCNGA 1 cut(s) 163
Hpy188III TCNNGA 5 cut(s) 140, 148, 296, 660, 862
HpyCH4III ACNGT 6 cut(s) 35, 53, 155, 247, 484, 786
HpyCH4IV ACGT 1 cut(s) 215
HpyF10VI GCNNNNNNNGC 1 cut(s) 472
HpyF3I CTNAG 2 cut(s) 687, 1008
HpySE526I ACGT 1 cut(s) 215
Hsp92II CATG 5 cut(s) 416, 497, 601, 702, 931
HspAI GCGC 2 cut(s) 96, 464
Ksp22I TGATCA 1 cut(s) 319
Kzo9I GATC 7 cut(s) 136, 319, 404, 651, 714, 777, 997
LguI GCTCTTC 1 cut(s) 621
LmnI GCTCC 2 cut(s) 295, 471
LpnPI CCDG 8 cut(s) 387, 414, 457, 528, 590, 596, 645, 740
MaeII ACGT 1 cut(s) 215
MaeIII GTNAC 3 cut(s) 53, 449, 562
MalI GATC 7 cut(s) 138, 321, 406, 653, 716, 779, 999
MboI GATC 7 cut(s) 136, 319, 404, 651, 714, 777, 997
MboII GAAGA 4 cut(s) 360, 638, 886, 971
MfeI CAATTG 1 cut(s) 1029
MflI RGATCY 1 cut(s) 404
MhlI GDGCHC 1 cut(s) 292
MluCI AATT 8 cut(s) 64, 157, 180, 547, 759, 821, 1029, 1060
MmeI TCCRAC 1 cut(s) 373
MnlI CCTC 6 cut(s) 24, 79, 143, 303, 449, 550
MseI TTAA 4 cut(s) 176, 339, 588, 1077
MslI CAYNNNNRTG 2 cut(s) 816, 926
MspCI CTTAAG 1 cut(s) 175
MspI CCGG 2 cut(s) 515, 577
MspR9I CCNGG 2 cut(s) 402, 578
MunI CAATTG 1 cut(s) 1029
MvaI CCWGG 1 cut(s) 402
MwoI GCNNNNNNNGC 1 cut(s) 472
NciI CCSGG 1 cut(s) 578
NcoI CCATGG 1 cut(s) 412
NdeII GATC 7 cut(s) 136, 319, 404, 651, 714, 777, 997
NlaIII CATG 5 cut(s) 416, 497, 601, 702, 931
NlaIV GGNNCC 2 cut(s) 208, 581
NmuCI GTSAC 2 cut(s) 449, 562
NspI RCATGY 1 cut(s) 497
NspV TTCGAA 1 cut(s) 219
PaeR7I CTCGAG 1 cut(s) 296
PciI ACATGT 1 cut(s) 493
PciSI GCTCTTC 1 cut(s) 621
PfoI TCCNGGA 1 cut(s) 400
Ple19I CGATCG 1 cut(s) 1000
PscI ACATGT 1 cut(s) 493
PsiI TTATAA 1 cut(s) 897
Psp6I CCWGG 1 cut(s) 400
PspGI CCWGG 1 cut(s) 400
PspN4I GGNNCC 2 cut(s) 208, 581
PspPI GGNCC 3 cut(s) 44, 206, 580
PsuI RGATCY 1 cut(s) 404
PvuI CGATCG 1 cut(s) 1000
RsaI GTAC 1 cut(s) 1025
RsaNI GTAC 1 cut(s) 1024
RseI CAYNNNNRTG 2 cut(s) 816, 926
SapI GCTCTTC 1 cut(s) 621
SaqAI TTAA 4 cut(s) 176, 339, 588, 1077
Sau3AI GATC 7 cut(s) 136, 319, 404, 651, 714, 777, 997
Sau96I GGNCC 3 cut(s) 44, 206, 580
ScrFI CCNGG 2 cut(s) 402, 578
SduI GDGCHC 1 cut(s) 292
SfcI CTRYAG 1 cut(s) 480
Sfr274I CTCGAG 1 cut(s) 296
SfuI TTCGAA 1 cut(s) 219
SinI GGWCC 3 cut(s) 44, 206, 580
SlaI CTCGAG 1 cut(s) 296
SmiMI CAYNNNNRTG 2 cut(s) 816, 926
SmlI CTYRAG 2 cut(s) 175, 296
SmoI CTYRAG 2 cut(s) 175, 296
Sse9I AATT 8 cut(s) 64, 157, 180, 547, 759, 821, 1029, 1060
SsiI CCGC 4 cut(s) 47, 185, 642, 809
SspI AATATT 1 cut(s) 235
StyD4I CCNGG 2 cut(s) 400, 576
StyI CCWWGG 2 cut(s) 412, 768
TaaI ACNGT 6 cut(s) 35, 53, 155, 247, 484, 786
TaiI ACGT 1 cut(s) 218
TaqII GACCGA 1 cut(s) 437
TasI AATT 8 cut(s) 64, 157, 180, 547, 759, 821, 1029, 1060
Tru1I TTAA 4 cut(s) 176, 339, 588, 1077
Tru9I TTAA 4 cut(s) 176, 339, 588, 1077
TscAI CASTG 1 cut(s) 476
TseFI GTSAC 2 cut(s) 449, 562
Tsp45I GTSAC 2 cut(s) 449, 562
TspDTI ATGAA 4 cut(s) 44, 180, 861, 907
TspRI CASTG 1 cut(s) 476
Vha464I CTTAAG 1 cut(s) 175
VpaK11BI GGWCC 3 cut(s) 44, 206, 580
XapI RAATTY 1 cut(s) 821
XceI RCATGY 1 cut(s) 497
XhoI CTCGAG 1 cut(s) 296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.