Rw7G001630

S-adenosylmethionine-dependent methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000151
Physical Location & Seq
Forward (+)
1370041 .. 1376000
5960 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G001630.1

Sequence Viewer

Length: 1140 bp
ATGGTAATTCCATTGATAATAGCACATGCCAAGAACGCCATTACATACTCACCCAGAAAAATGGCAGCAGAGGAAACTAGATTATCAGAAGCATTTCCAATGAAAGCTGGAGATGGCCCCAACAGTTATGCCAAGAACTCCACATACCAGAGAGGAGTTGCGGATGCTGCCAAAGAACTTCTAACAAATGCGATTGCAGAAAACCTTGACACAGAGATCTTGTTATCTTCAAACACATTTCACATTGCAGATTTGGGTTGCTCTGTCGGATATAATACATTTTATGCAGTAAAAAACATCCTTGAATCTGTACAGTCTAAGTATCAATCTAAGGGGCCAAATTCCCAAATCCCTGAATTTCAAGTTTTCTTTAATGATTCCACCACAAATGACTTCAACATTCTCCTCAAATCACTCCCTCACAACAGGCATGCCGCAGGTGTTCCTGGTTCTTTCTATGGTCGCATCTTTCCTAATGCATCAGTTCACTTTGTTCACTCTTCCTATACCAATCATTGGCTTTCTAAAGTACCAAAAGATGTAACGGACAGCAACTCCCCTGCTTGGAATACAGGAAGAATACATTACTTAAAATCCACAGATGAAGTTGTGAGGGCTTATGAAGATCAATACGCCAGGGACATGGAGTGCTTCCTGCATGTCAGGTCACAAGAGATTGTGAATGGAGGAATAATGGTGCTTACTATTCCAGTCCGCCCTGATGGTACACCTCGCTCACATGCTGCAGCAAACGTTACCTATCAACTTTTAGGAACTTGCCTCATTGAAATGGCTAAGAAGGGAGATATTAGTGAAGAGAAAGTAGATTCATTTAACATACCTATGTATACCATGTCTCCCCAAGAACTGAAAGCTGCTGTAGAACGAAATAGATGTTTTAGTATAGAGATAATGTTATACTTACCTCATCAGTTGGTAGATGACACTATCTCCCTGTCTCAACTACTTGCCTCTCACCTGAGGGCGGGCATGGAGGGGATCGTCAAGCAGCAATTTGGAAAAGAAATCATAGATGAGCTGTTTGACTTGTATCAGAATAAATGTGAAGAGCATGCCTCCATATTTAAGTCAGGGAAATCAGGTAACTTTCTTGTTCTGCTTAGGCGCACTGCAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_7

Protein Analysis

379

Amino Acids

42.34

Weight (kDa)

6.23

Isoelectric Point (pI)

47.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_7 PF03492 69 - 376 1.3e-100 SAM dependent carboxyl methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000151)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G37970 AT5G37990 AT5G38100 AT5G38100 AT5G38100 AT5G38100 AT5G38780 AT5G38780
fragaria_vesca FvH4_4g07940 FvH4_4g07950 FvH4_5g16970 FvH4_7g18490
malus_domestica MD02G1312100.v1.1 MD02G1312500.v1.1 MD05G1007900.v1.1 MD06G1223300.v1.1 MD06G1223500.v1.1 MD06G1223600.v1.1 MD06G1223700.v1.1 MD06G1223800.v1.1 MD06G1227300.v1.1 MD09G1253900.v1.1 MD09G1254000.v1.1 MD09G1254100.v1.1 MD09G1254200.v1.1 MD09G1254300.v1.1 MD10G1005200.v1.1 MD10G1005900.v1.1 MD14G1232400.v1.1 MD14G1232700.v1.1 MD14G1232800.v1.1 MD14G1232900.v1.1 MD14G1233000.v1.1 MD15G1255300.v1.1
prunus_persica Prupe.5G228400_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228600_v2.0.a1 Prupe.5G228700_v2.0.a1 Prupe.5G228800_v2.0.a1 Prupe.5G228900_v2.0.a1 Prupe.5G229000_v2.0.a1 Prupe.8G008300_v2.0.a1
pyrus_communis pycom02g26200 pycom02g26220 pycom05g00410 pycom06g19910 pycom06g19920 pycom06g19930 pycom06g19940 pycom06g20380 pycom09g16970 pycom09g16990 pycom09g17000 pycom10g00420 pycom14g19370 pycom14g19380 pycom14g19420 pycom14g19430 pycom15g22380 pycom15g22390
rosa_chinensis RchiOBHm_Chr1g0327241 RchiOBHm_Chr1g0327261 RchiOBHm_Chr2g0128631 RchiOBHm_Chr2g0137031 RchiOBHm_Chr3g0486031 RchiOBHm_Chr3g0486051 RchiOBHm_Chr3g0486091 RchiOBHm_Chr4g0400921 RchiOBHm_Chr4g0400971 RchiOBHm_Chr4g0400991 RchiOBHm_Chr7g0178281 RchiOBHm_Chr7g0178301 RchiOBHm_Chr7g0178321 RchiOBHm_Chr7g0178951 RchiOBHm_Chr7g0178961 RchiOBHm_Chr7g0178971 RchiOBHm_Chr7g0178991 RchiOBHm_Chr7g0179001 RchiOBHm_Chr7g0179021 RchiOBHm_Chr7g0179031 RchiOBHm_Chr7g0179041 RchiOBHm_Chr7g0179051 RchiOBHm_Chr7g0187641 RchiOBHm_Chr7g0201881 RchiOBHm_Chr7g0201901
rosa_laevigata RLG00000005390 RLG00000005391 RLG00000005392 RLG00000005394 RLG00000005456 RLG00000009163 RLG00000009164 RLG00000019598 RLG00000023105 RLG00000030028
rosa_multiflora Rmu_co8337425.1_g000001 Rmu_sc0000795.1_g000125 Rmu_sc0000837.1_g000085 Rmu_sc0000888.1_g000008 Rmu_sc0000888.1_g000010 Rmu_sc0000888.1_g000011 Rmu_sc0000888.1_g000013 Rmu_sc0001021.1_g000003 Rmu_sc0001021.1_g000004 Rmu_sc0001021.1_g000006 Rmu_sc0001374.1_g000046 Rmu_sc0002026.1_g000007 Rmu_sc0002026.1_g000019 Rmu_sc0003465.1_g000046 Rmu_sc0004483.1_g000006 Rmu_sc0006229.1_g000002 Rmu_sc0006736.1_g000019 Rmu_sc0006736.1_g000027 Rmu_sc0007073.1_g000003 Rmu_sc0036373.1_g000001 Rmu_ssc0000009.1_g000007
rosa_roxburghii Rroxscaffold_2G00107760 Rroxscaffold_2G00115440 Rroxscaffold_2G00115920 Rroxscaffold_3G00255030 Rroxscaffold_3G00267200 Rroxscaffold_3G00274440 Rroxscaffold_3G00274450 Rroxscaffold_3G00274480 Rroxscaffold_4G00322940 Rroxscaffold_4G00322950 Rroxscaffold_4G00322980 Rroxscaffold_4G00323000 Rroxscaffold_4G00323020 Rroxscaffold_5G00345860 Rroxscaffold_5G00345890 Rroxscaffold_5G00345920 Rroxscaffold_6G00396060 Rroxscaffold_6G00396070
rosa_rugosa Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064800 Rorug01G0297000 Rorug02G0279500 Rorug02G0337300 Rorug03G0223300 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223500 Rorug03G0223600 Rorug04G0027400 Rorug04G0027500 Rorug04G0027600 Rorug06G0420600 Rorug06G0420600 Rorug06G0483400 Rorug07G0066400 Rorug07G0066600
rosa_samantha Rh1AG081900 Rh1AG082300 Rh1AG082400 Rh1AG305600 Rh2BG340800 Rh2BG393000 Rh3BG308300 Rh4CG113300 Rh4CG113700 Rh7CG020600 Rh7CG020700 Rh7CG020800 Rh7CG021000 Rh7CG088900 Rh7CG204900
rosa_wichuraiana Rw0G002670 Rw0G014940 Rw0G021450 Rw1G006470 Rw1G006490 Rw2G026880 Rw2G027140 Rw2G031610 Rw3G024210 Rw3G024220 Rw7G001620 Rw7G001630 Rw7G001640 Rw7G001650 Rw7G016930 Rw7G016950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 428
Acc36I ACCTGC 1 cut(s) 428
AccB7I CCANNNNNTGG 1 cut(s) 516
AccI GTMKAC 1 cut(s) 848
AciI CCGC 4 cut(s) 161, 435, 715, 986
AclI AACGTT 1 cut(s) 753
AclWI GGATC 1 cut(s) 1007
AcsI RAATTY 2 cut(s) 340, 356
AfaI GTAC 3 cut(s) 312, 531, 727
AfiI CCNNNNNNNGG 3 cut(s) 516, 564, 985
AgsI TTSAA 5 cut(s) 231, 305, 362, 397, 788
AjnI CCWGG 2 cut(s) 445, 635
AluBI AGCT 3 cut(s) 107, 875, 1039
AluI AGCT 3 cut(s) 107, 875, 1039
Alw26I GTCTC 2 cut(s) 861, 963
AlwI GGATC 1 cut(s) 1007
AoxI GGCC 2 cut(s) 115, 335
ApeKI GCWGC 6 cut(s) 65, 167, 743, 746, 875, 1009
ApoI RAATTY 2 cut(s) 340, 356
Asp700I GAANNNNTTC 1 cut(s) 93
AspLEI GCGC 1 cut(s) 1128
AspS9I GGNCC 2 cut(s) 116, 335
AsuHPI GGTGA 2 cut(s) 42, 968
AxyI CCTNAGG 1 cut(s) 980
BbvI GCAGC 6 cut(s) 77, 154, 730, 758, 862, 1021
BccI CCATC 2 cut(s) 107, 716
BciT130I CCWGG 2 cut(s) 447, 637
BcoDI GTCTC 2 cut(s) 861, 963
BfaI CTAG 1 cut(s) 78
BfmI CTRYAG 3 cut(s) 744, 879, 1131
BfuAI ACCTGC 1 cut(s) 428
BglII AGATCT 1 cut(s) 216
BisI GCNGC 7 cut(s) 66, 168, 435, 744, 747, 876, 1010
BlsI GCNGC 7 cut(s) 67, 169, 436, 745, 748, 877, 1011
Bme1390I CCNGG 2 cut(s) 447, 637
BmgT120I GGNCC 2 cut(s) 116, 335
BmiI GGNNCC 2 cut(s) 118, 336
BmrFI CCNGG 2 cut(s) 447, 637
BmsI GCATC 3 cut(s) 154, 474, 488
BplI GAGNNNNNCTC 2 cut(s) 1061, 1093
BpmI CTGGAG 1 cut(s) 129
Bpu10I CCTNAGC 1 cut(s) 1121
BsaJI CCNNGG 1 cut(s) 636
BsaXI ACNNNNNCTCC 6 cut(s) 539, 569, 841, 871, 935, 965
Bsc4I CCNNNNNNNGG 3 cut(s) 516, 564, 985
Bse1I ACTGG 1 cut(s) 710
Bse21I CCTNAGG 1 cut(s) 980
Bse3DI GCAATG 1 cut(s) 243
BseBI CCWGG 2 cut(s) 447, 637
BseDI CCNNGG 1 cut(s) 636
BseGI GGATG 2 cut(s) 169, 297
BseLI CCNNNNNNNGG 3 cut(s) 516, 564, 985
BseMI GCAATG 1 cut(s) 243
BseMII CTCAG 1 cut(s) 971
BseNI ACTGG 1 cut(s) 710
BseRI GAGGAG 2 cut(s) 168, 395
BseXI GCAGC 6 cut(s) 77, 154, 730, 758, 862, 1021
BshFI GGCC 2 cut(s) 117, 337
BslFI GGGAC 1 cut(s) 653
BslI CCNNNNNNNGG 3 cut(s) 516, 564, 985
BsmAI GTCTC 2 cut(s) 861, 963
BsmFI GGGAC 1 cut(s) 653
BsnI GGCC 2 cut(s) 117, 337
Bsp1407I TGTACA 1 cut(s) 310
Bsp143I GATC 3 cut(s) 216, 625, 999
BspACI CCGC 4 cut(s) 161, 435, 715, 986
BspANI GGCC 2 cut(s) 117, 337
BspCNI CTCAG 1 cut(s) 972
BspLI GGNNCC 2 cut(s) 118, 336
BspMAI CTGCAG 2 cut(s) 748, 1135
BspMI ACCTGC 1 cut(s) 428
BspPI GGATC 1 cut(s) 1007
BspQI GCTCTTC 1 cut(s) 1062
BsrDI GCAATG 1 cut(s) 243
BsrGI TGTACA 1 cut(s) 310
BsrI ACTGG 1 cut(s) 710
BssECI CCNNGG 1 cut(s) 636
BssMI GATC 3 cut(s) 216, 625, 999
BssNAI GTATAC 1 cut(s) 849
Bst1107I GTATAC 1 cut(s) 849
Bst2UI CCWGG 2 cut(s) 447, 637
Bst4CI ACNGT 2 cut(s) 125, 315
Bst6I CTCTTC 3 cut(s) 505, 810, 1062
BstAUI TGTACA 1 cut(s) 310
BstC8I GCNNGC 3 cut(s) 432, 988, 1074
BstDEI CTNAG 5 cut(s) 318, 330, 795, 980, 1121
BstF5I GGATG 2 cut(s) 169, 297
BstHHI GCGC 1 cut(s) 1128
BstKTI GATC 3 cut(s) 219, 628, 1002
BstMAI GTCTC 2 cut(s) 861, 963
BstMBI GATC 3 cut(s) 216, 625, 999
BstMWI GCNNNNNNNGC 2 cut(s) 35, 167
BstNI CCWGG 2 cut(s) 447, 637
BstNSI RCATGY 5 cut(s) 29, 434, 662, 743, 1076
BstSCI CCNGG 2 cut(s) 445, 635
BstSFI CTRYAG 3 cut(s) 744, 879, 1131
BstV1I GCAGC 6 cut(s) 77, 154, 730, 758, 862, 1021
BstX2I RGATCY 1 cut(s) 216
BstXI CCANNNNNNTGG 2 cut(s) 61, 643
BstYI RGATCY 1 cut(s) 216
BstZ17I GTATAC 1 cut(s) 849
Bsu36I CCTNAGG 1 cut(s) 980
BsuRI GGCC 2 cut(s) 117, 337
BtsCI GGATG 2 cut(s) 169, 297
BtsI GCAGTG 1 cut(s) 1128
BtsIMutI CAGTG 1 cut(s) 1128
BveI ACCTGC 1 cut(s) 428
Cac8I GCNNGC 3 cut(s) 432, 988, 1074
CfoI GCGC 1 cut(s) 1128
Cfr13I GGNCC 2 cut(s) 116, 335
Csp6I GTAC 3 cut(s) 311, 530, 726
CviAII CATG 8 cut(s) 26, 431, 643, 659, 740, 853, 991, 1073
CviJI RGCY 8 cut(s) 107, 117, 337, 520, 617, 794, 875, 1039
CviKI_1 RGCY 8 cut(s) 107, 117, 337, 520, 617, 794, 875, 1039
CviQI GTAC 3 cut(s) 311, 530, 726
DdeI CTNAG 5 cut(s) 318, 330, 795, 980, 1121
DpnI GATC 3 cut(s) 218, 627, 1001
DpnII GATC 3 cut(s) 216, 625, 999
Eam1104I CTCTTC 3 cut(s) 505, 810, 1062
EarI CTCTTC 3 cut(s) 505, 810, 1062
EciI GGCGGA 1 cut(s) 704
Eco81I CCTNAGG 1 cut(s) 980
EcoRII CCWGG 2 cut(s) 445, 635
EcoT22I ATGCAT 1 cut(s) 481
FaeI CATG 8 cut(s) 29, 434, 646, 662, 743, 856, 994, 1076
FaqI GGGAC 1 cut(s) 653
FatI CATG 8 cut(s) 25, 430, 642, 658, 739, 852, 990, 1072
FauI CCCGC 1 cut(s) 979
FblI GTMKAC 1 cut(s) 848
Fnu4HI GCNGC 7 cut(s) 66, 168, 435, 744, 747, 876, 1010
FokI GGATG 2 cut(s) 176, 284
Fsp4HI GCNGC 7 cut(s) 66, 168, 435, 744, 747, 876, 1010
FspBI CTAG 1 cut(s) 78
GlaI GCGC 1 cut(s) 1127
GluI GCNGC 7 cut(s) 66, 168, 435, 744, 747, 876, 1010
GsuI CTGGAG 1 cut(s) 129
HaeIII GGCC 2 cut(s) 117, 337
HhaI GCGC 1 cut(s) 1128
Hin1II CATG 8 cut(s) 29, 434, 646, 662, 743, 856, 994, 1076
Hin6I GCGC 1 cut(s) 1126
HinP1I GCGC 1 cut(s) 1126
HinfI GANTC 3 cut(s) 305, 377, 827
HphI GGTGA 2 cut(s) 42, 968
Hpy166II GTNNAC 4 cut(s) 487, 496, 728, 849
Hpy188I TCNGA 3 cut(s) 88, 269, 1056
Hpy8I GTNNAC 4 cut(s) 487, 496, 728, 849
HpyAV CCTTC 1 cut(s) 793
HpyCH4III ACNGT 2 cut(s) 125, 315
HpyCH4IV ACGT 1 cut(s) 753
HpyCH4V TGCA 7 cut(s) 197, 248, 287, 479, 658, 746, 1133
HpyF10VI GCNNNNNNNGC 2 cut(s) 35, 167
HpyF3I CTNAG 5 cut(s) 318, 330, 795, 980, 1121
HpySE526I ACGT 1 cut(s) 753
Hsp92II CATG 8 cut(s) 29, 434, 646, 662, 743, 856, 994, 1076
HspAI GCGC 1 cut(s) 1126
Kzo9I GATC 3 cut(s) 216, 625, 999
LguI GCTCTTC 1 cut(s) 1062
Lsp1109I GCAGC 6 cut(s) 77, 154, 730, 758, 862, 1021
LweI GCATC 3 cut(s) 154, 474, 488
MaeI CTAG 1 cut(s) 78
MaeII ACGT 1 cut(s) 753
MaeIII GTNAC 4 cut(s) 541, 666, 754, 1103
MalI GATC 3 cut(s) 218, 627, 1001
MboI GATC 3 cut(s) 216, 625, 999
MboII GAAGA 6 cut(s) 219, 492, 588, 635, 827, 1079
MflI RGATCY 1 cut(s) 216
MluCI AATT 4 cut(s) 6, 340, 356, 1013
MmeI TCCRAC 1 cut(s) 247
Mph1103I ATGCAT 1 cut(s) 481
MroXI GAANNNNTTC 1 cut(s) 93
MseI TTAA 4 cut(s) 372, 590, 834, 1086
MslI CAYNNNNRTG 2 cut(s) 788, 842
MspR9I CCNGG 2 cut(s) 447, 637
MvaI CCWGG 2 cut(s) 447, 637
MwoI GCNNNNNNNGC 2 cut(s) 35, 167
NdeII GATC 3 cut(s) 216, 625, 999
NlaIII CATG 8 cut(s) 29, 434, 646, 662, 743, 856, 994, 1076
NlaIV GGNNCC 2 cut(s) 118, 336
NmuCI GTSAC 1 cut(s) 666
NsiI ATGCAT 1 cut(s) 481
NspI RCATGY 5 cut(s) 29, 434, 662, 743, 1076
PaeI GCATGC 2 cut(s) 434, 1076
PaqCI CACCTGC 1 cut(s) 428
PciSI GCTCTTC 1 cut(s) 1062
PdmI GAANNNNTTC 1 cut(s) 93
PfeI GAWTC 3 cut(s) 305, 377, 827
PflMI CCANNNNNTGG 1 cut(s) 516
PkrI GCNGC 7 cut(s) 67, 169, 436, 745, 748, 877, 1011
Psp1406I AACGTT 1 cut(s) 753
Psp6I CCWGG 2 cut(s) 445, 635
PspGI CCWGG 2 cut(s) 445, 635
PspN4I GGNNCC 2 cut(s) 118, 336
PspPI GGNCC 2 cut(s) 116, 335
PsrI GAACNNNNNNTAC 2 cut(s) 128, 160
PstI CTGCAG 2 cut(s) 748, 1135
PsuI RGATCY 1 cut(s) 216
RsaI GTAC 3 cut(s) 312, 531, 727
RsaNI GTAC 3 cut(s) 311, 530, 726
RseI CAYNNNNRTG 2 cut(s) 788, 842
SapI GCTCTTC 1 cut(s) 1062
SaqAI TTAA 4 cut(s) 372, 590, 834, 1086
SatI GCNGC 7 cut(s) 66, 168, 435, 744, 747, 876, 1010
Sau3AI GATC 3 cut(s) 216, 625, 999
Sau96I GGNCC 2 cut(s) 116, 335
ScrFI CCNGG 2 cut(s) 447, 637
SfaNI GCATC 3 cut(s) 154, 474, 488
SfcI CTRYAG 3 cut(s) 744, 879, 1131
SmiMI CAYNNNNRTG 2 cut(s) 788, 842
SphI GCATGC 2 cut(s) 434, 1076
Sse9I AATT 4 cut(s) 6, 340, 356, 1013
SsiI CCGC 4 cut(s) 161, 435, 715, 986
SspMI CTAG 1 cut(s) 78
StyD4I CCNGG 2 cut(s) 445, 635
TaaI ACNGT 2 cut(s) 125, 315
TaiI ACGT 1 cut(s) 756
TasI AATT 4 cut(s) 6, 340, 356, 1013
TatI WGTACW 1 cut(s) 310
TauI GCSGC 1 cut(s) 437
TfiI GAWTC 3 cut(s) 305, 377, 827
Tru1I TTAA 4 cut(s) 372, 590, 834, 1086
Tru9I TTAA 4 cut(s) 372, 590, 834, 1086
TscAI CASTG 1 cut(s) 1135
TseFI GTSAC 1 cut(s) 666
TseI GCWGC 6 cut(s) 65, 167, 743, 746, 875, 1009
Tsp45I GTSAC 1 cut(s) 666
TspDTI ATGAA 4 cut(s) 116, 618, 636, 819
TspGWI ACGGA 1 cut(s) 560
TspRI CASTG 1 cut(s) 1135
Van91I CCANNNNNTGG 1 cut(s) 516
XapI RAATTY 2 cut(s) 340, 356
XceI RCATGY 5 cut(s) 29, 434, 662, 743, 1076
XmiI GTMKAC 1 cut(s) 848
XmnI GAANNNNTTC 1 cut(s) 93
XspI CTAG 1 cut(s) 78
Zsp2I ATGCAT 1 cut(s) 481
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.