Rh7CG204900

S-adenosylmethionine-dependent methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000151
Physical Location & Seq
Reverse (-)
18213496 .. 18235695
22200 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG204900.1

Sequence Viewer

Length: 1815 bp
ATGTTGGCAGGAGGGCATCTTGTTGAGGAAGTGCTTGAACAAGAGGGTGTTAAATCTGAGGAGGTGCAAAAGCGTTTGCTGCATTTTGGTTTTGACAAACTTCAAGATAAATCCAAGTTTTTAGTTGGAAGCAAAATGACACTCTCTTATGAATTCTTCATGGAATCCAATTCCTTATCTTCACTGTGGTCAGAAACCAGCAAGGGGAATTGGGGAGTGTTGTTCACTATCTCCGCAATTTTTGCAGCAATTTTTTACGCATGGAGTTGCCTGGAGAGTTGCAGAATCTCGCCGCCGTTGCCTCCAGGTCCACGTGGCCTCCCGCTGGTTGGTAATCTTCTATCCGTTGACCCACAGCTCCACACCTACTTTGCGGGCCTATCCAAAACTTACGGCCCAATCTATAAGCTCCGACTGGGTACCAGGCTCTGTGTCGTAATAGCCTCCCCTTCCGCCGCTCGAGAGGTGCTCAAGGATAATGACCTCACGTTCTCCAGTCGCGGCGTCAATTGTGCAGCTGGGGACGTCGCACTCTACGGCGGGGCAGGTATAGTTTGTACCCCGTATGGGCCGGAGTGGCGAATGTTGAGGAAAGTGTGCGTGCTCAAGATGCTTAGCAACACCGCCTTGGACTCGGTTCACCAACTGCGCCACTCGCAGGTCCGAAAAGCTGTGCGTTACTTCTACAGTCAGGTCGGGTCGCCCGTCAACATTGAGATGGCAGCAGAAGATACCATCACCAGTGAACTAATCTCAGAAGCACATCCAATGAAAGGTGGAGATGGCGCCAACAGCTATGCCAAAAATTCCACTTTCCAGAAAGGAGCTGTGGATAATGCCAAACAGCTTTTGAACAAGGTGATTGCAGAAAAGCTTGACCTAGAAATCTTGTCATCTCCCAGCTCCTTTCACATTGCAGATCTGGGTTGCTCTGTTGGGCCGAATACGTTTTCTGCAGTTGAAAACATAATTGAAGCCGTGGTACTCAAGTATCACAGCCAGCTTGGTTTGAATGTTCAAATCCCTGAATTTCAAGTCTTCTTCAATGATCATACCTCAAATGACTTCAACCTGCTCTTCAAATCCCTCCCTCAGAACAGGCAATACTACGCTGCCGGTGTACCGGGTTCTTTTTACGATCGCAGATTTCCTGAGGCTTCCCTTCACTTGGTTCACTCTTCTACTGCCCTTCACTGGCTTTCTAAAGTACCAGCGGAGGTGTTGGACAAAAATAGTCTTGCTTATAACAAAGGACGAATCCATTACTCAAATGCCACAGATGAAGTGATAAGGGCTCATGAAACTCAATATGCGGTAGACATGGAGCGCTTTCTCCATTCCCGGGCACAAGAGGTTGTTTATGGAGGACTCATGGTACTCAACATTCCAGGCCGCCCTGACGGCACCACTCATTCTTATCCTTTCTCAAAGGTGACCTTGCAACTTTTGGGATCTTGCCTCATGGACTTGGTTGAAAAGGGAGTTGTTAGTGAAGAGAAAGTAGATTCGTTTAACATACCTACGTATACAATGTCTCCCCAAGAACTGAAAGCTGTTGTAGAACGAAATGGATGTTTTAGCATAGAGACAATAACACAGTTACCTCTTGTAGTCTTGGCAGATAGGCCTAATATGGCACTGCCGCAACTACTTGCCGCTCATATGAGAGCTGGCACGGAAGGGATAGTCAAGGAGCACTTTGGGGAAGAAATATTAGATGAGCTCTTCGACTTGTATCTCACAAAATGTGAAGAGCATGTCACTGCTGTTGAGACAGTTACATTTCTTGTTGTGCTTAAACGCAAGGCAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_7

Protein Analysis

604

Amino Acids

66.84

Weight (kDa)

6.04

Isoelectric Point (pI)

44.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 101 - 240 2.2e-19 Cytochrome P450
Methyltransf_7 PF03492 294 - 601 5.9e-103 SAM dependent carboxyl methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000151)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G37970 AT5G37990 AT5G38100 AT5G38100 AT5G38100 AT5G38100 AT5G38780 AT5G38780
fragaria_vesca FvH4_4g07940 FvH4_4g07950 FvH4_5g16970 FvH4_7g18490
malus_domestica MD02G1312100.v1.1 MD02G1312500.v1.1 MD05G1007900.v1.1 MD06G1223300.v1.1 MD06G1223500.v1.1 MD06G1223600.v1.1 MD06G1223700.v1.1 MD06G1223800.v1.1 MD06G1227300.v1.1 MD09G1253900.v1.1 MD09G1254000.v1.1 MD09G1254100.v1.1 MD09G1254200.v1.1 MD09G1254300.v1.1 MD10G1005200.v1.1 MD10G1005900.v1.1 MD14G1232400.v1.1 MD14G1232700.v1.1 MD14G1232800.v1.1 MD14G1232900.v1.1 MD14G1233000.v1.1 MD15G1255300.v1.1
prunus_persica Prupe.5G228400_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228600_v2.0.a1 Prupe.5G228700_v2.0.a1 Prupe.5G228800_v2.0.a1 Prupe.5G228900_v2.0.a1 Prupe.5G229000_v2.0.a1 Prupe.8G008300_v2.0.a1
pyrus_communis pycom02g26200 pycom02g26220 pycom05g00410 pycom06g19910 pycom06g19920 pycom06g19930 pycom06g19940 pycom06g20380 pycom09g16970 pycom09g16990 pycom09g17000 pycom10g00420 pycom14g19370 pycom14g19380 pycom14g19420 pycom14g19430 pycom15g22380 pycom15g22390
rosa_chinensis RchiOBHm_Chr1g0327241 RchiOBHm_Chr1g0327261 RchiOBHm_Chr2g0128631 RchiOBHm_Chr2g0137031 RchiOBHm_Chr3g0486031 RchiOBHm_Chr3g0486051 RchiOBHm_Chr3g0486091 RchiOBHm_Chr4g0400921 RchiOBHm_Chr4g0400971 RchiOBHm_Chr4g0400991 RchiOBHm_Chr7g0178281 RchiOBHm_Chr7g0178301 RchiOBHm_Chr7g0178321 RchiOBHm_Chr7g0178951 RchiOBHm_Chr7g0178961 RchiOBHm_Chr7g0178971 RchiOBHm_Chr7g0178991 RchiOBHm_Chr7g0179001 RchiOBHm_Chr7g0179021 RchiOBHm_Chr7g0179031 RchiOBHm_Chr7g0179041 RchiOBHm_Chr7g0179051 RchiOBHm_Chr7g0187641 RchiOBHm_Chr7g0201881 RchiOBHm_Chr7g0201901
rosa_laevigata RLG00000005390 RLG00000005391 RLG00000005392 RLG00000005394 RLG00000005456 RLG00000009163 RLG00000009164 RLG00000019598 RLG00000023105 RLG00000030028
rosa_multiflora Rmu_co8337425.1_g000001 Rmu_sc0000795.1_g000125 Rmu_sc0000837.1_g000085 Rmu_sc0000888.1_g000008 Rmu_sc0000888.1_g000010 Rmu_sc0000888.1_g000011 Rmu_sc0000888.1_g000013 Rmu_sc0001021.1_g000003 Rmu_sc0001021.1_g000004 Rmu_sc0001021.1_g000006 Rmu_sc0001374.1_g000046 Rmu_sc0002026.1_g000007 Rmu_sc0002026.1_g000019 Rmu_sc0003465.1_g000046 Rmu_sc0004483.1_g000006 Rmu_sc0006229.1_g000002 Rmu_sc0006736.1_g000019 Rmu_sc0006736.1_g000027 Rmu_sc0007073.1_g000003 Rmu_sc0036373.1_g000001 Rmu_ssc0000009.1_g000007
rosa_roxburghii Rroxscaffold_2G00107760 Rroxscaffold_2G00115440 Rroxscaffold_2G00115920 Rroxscaffold_3G00255030 Rroxscaffold_3G00267200 Rroxscaffold_3G00274440 Rroxscaffold_3G00274450 Rroxscaffold_3G00274480 Rroxscaffold_4G00322940 Rroxscaffold_4G00322950 Rroxscaffold_4G00322980 Rroxscaffold_4G00323000 Rroxscaffold_4G00323020 Rroxscaffold_5G00345860 Rroxscaffold_5G00345890 Rroxscaffold_5G00345920 Rroxscaffold_6G00396060 Rroxscaffold_6G00396070
rosa_rugosa Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064800 Rorug01G0297000 Rorug02G0279500 Rorug02G0337300 Rorug03G0223300 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223500 Rorug03G0223600 Rorug04G0027400 Rorug04G0027500 Rorug04G0027600 Rorug06G0420600 Rorug06G0420600 Rorug06G0483400 Rorug07G0066400 Rorug07G0066600
rosa_samantha Rh1AG081900 Rh1AG082300 Rh1AG082400 Rh1AG305600 Rh2BG340800 Rh2BG393000 Rh3BG308300 Rh4CG113300 Rh4CG113700 Rh7CG020600 Rh7CG020700 Rh7CG020800 Rh7CG021000 Rh7CG088900 Rh7CG204900
rosa_wichuraiana Rw0G002670 Rw0G014940 Rw0G021450 Rw1G006470 Rw1G006490 Rw2G026880 Rw2G027140 Rw2G031610 Rw3G024210 Rw3G024220 Rw7G001620 Rw7G001630 Rw7G001640 Rw7G001650 Rw7G016930 Rw7G016950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1245
AatII GACGTC 1 cut(s) 528
Acc36I ACCTGC 3 cut(s) 536, 649, 1080
Acc65I GGTACC 1 cut(s) 419
AccB1I GGYRCC 3 cut(s) 419, 785, 1403
AccBSI CCGCTC 2 cut(s) 458, 1658
AccI GTMKAC 2 cut(s) 1317, 1526
AccII CGCG 1 cut(s) 501
AclWI GGATC 1 cut(s) 1459
AcsI RAATTY 3 cut(s) 152, 805, 1028
AcvI CACGTG 1 cut(s) 314
AcyI GRCGYC 3 cut(s) 504, 525, 786
AfaI GTAC 6 cut(s) 421, 559, 984, 1122, 1209, 1377
AfeI AGCGCT 1 cut(s) 1328
AfiI CCNNNNNNNGG 9 cut(s) 204, 325, 329, 567, 658, 773, 1168, 1194, 1342
AjnI CCWGG 4 cut(s) 270, 304, 422, 1387
Alw21I GWGCWC 4 cut(s) 471, 606, 1698, 1725
Alw26I GTCTC 3 cut(s) 1539, 1580, 1766
AlwI GGATC 1 cut(s) 1459
AlwNI CAGNNNCTG 1 cut(s) 429
Ama87I CYCGRG 2 cut(s) 459, 1341
Aor51HI AGCGCT 1 cut(s) 1328
AoxI GGCC 7 cut(s) 316, 376, 394, 569, 938, 1390, 1625
ApeKI GCWGC 5 cut(s) 79, 245, 515, 722, 1112
ApoI RAATTY 3 cut(s) 152, 805, 1028
Asp718I GGTACC 1 cut(s) 419
AspLEI GCGC 3 cut(s) 651, 788, 1329
AspS9I GGNCC 6 cut(s) 308, 376, 395, 569, 661, 938
AsuC2I CCSGG 3 cut(s) 1125, 1342, 1343
AsuHPI GGTGA 4 cut(s) 632, 730, 871, 1444
AvaI CYCGRG 2 cut(s) 459, 1341
AvaII GGWCC 2 cut(s) 308, 661
AxyI CCTNAGG 1 cut(s) 1152
BaeGI GKGCMC 1 cut(s) 1348
BaeI ACNNNNGTAYC 4 cut(s) 974, 974, 1007, 1007
BanI GGYRCC 3 cut(s) 419, 785, 1403
BanII GRGCYC 2 cut(s) 1297, 1725
BarI GAAGNNNNNNTAC 2 cut(s) 966, 998
BbrPI CACGTG 1 cut(s) 314
BbsI GAAGAC 1 cut(s) 1030
Bbv12I GWGCWC 4 cut(s) 471, 606, 1698, 1725
BbvI GCAGC 5 cut(s) 66, 257, 527, 734, 1099
BccI CCATC 3 cut(s) 712, 743, 776
BceAI ACGGC 5 cut(s) 280, 409, 553, 962, 1417
BciT130I CCWGG 4 cut(s) 272, 306, 424, 1389
BclI TGATCA 1 cut(s) 1048
BcnI CCSGG 3 cut(s) 1125, 1342, 1343
BcoDI GTCTC 3 cut(s) 1539, 1580, 1766
BfaI CTAG 1 cut(s) 881
BfmI CTRYAG 2 cut(s) 685, 954
BfoI RGCGCY 2 cut(s) 789, 1330
BfuAI ACCTGC 3 cut(s) 536, 649, 1080
BglI GCCNNNNNGGC 2 cut(s) 577, 1401
BglII AGATCT 1 cut(s) 919
BlpI GCTNAGC 1 cut(s) 614
Bme1390I CCNGG 7 cut(s) 272, 306, 424, 1125, 1342, 1343, 1389
Bme18I GGWCC 2 cut(s) 308, 661
BmeT110I CYCGRG 2 cut(s) 459, 1341
BmgT120I GGNCC 6 cut(s) 308, 376, 395, 569, 661, 938
BmiI GGNNCC 3 cut(s) 421, 787, 1405
BmrFI CCNGG 7 cut(s) 272, 306, 424, 1125, 1342, 1343, 1389
BmrI ACTGGG 1 cut(s) 425
BmsI GCATC 2 cut(s) 25, 600
BmuI ACTGGG 1 cut(s) 425
BpiI GAAGAC 1 cut(s) 1030
BplI GAGNNNNNCTC 2 cut(s) 453, 485
BpmI CTGGAG 3 cut(s) 288, 293, 478
Bpu1102I GCTNAGC 1 cut(s) 614
BpuEI CTTGAG 3 cut(s) 455, 590, 971
BpuMI CCSGG 3 cut(s) 1125, 1342, 1343
BsaAI YACGTR 2 cut(s) 314, 1524
BsaHI GRCGYC 3 cut(s) 504, 525, 786
BsaJI CCNNGG 3 cut(s) 627, 978, 1341
BsaXI ACNNNNNCTCC 4 cut(s) 303, 333, 1519, 1549
Bsc4I CCNNNNNNNGG 9 cut(s) 204, 325, 329, 567, 658, 773, 1168, 1194, 1342
Bse118I RCCGGY 1 cut(s) 1115
Bse1I ACTGG 4 cut(s) 420, 495, 741, 1199
Bse21I CCTNAGG 1 cut(s) 1152
Bse3DI GCAATG 1 cut(s) 912
BseBI CCWGG 4 cut(s) 272, 306, 424, 1389
BseDI CCNNGG 3 cut(s) 627, 978, 1341
BseGI GGATG 2 cut(s) 763, 1577
BseLI CCNNNNNNNGG 9 cut(s) 204, 325, 329, 567, 658, 773, 1168, 1194, 1342
BseMI GCAATG 1 cut(s) 912
BseMII CTCAG 4 cut(s) 48, 768, 1106, 1143
BseNI ACTGG 4 cut(s) 420, 495, 741, 1199
BseRI GAGGAG 1 cut(s) 74
BseSI GKGCMC 1 cut(s) 1348
BseXI GCAGC 5 cut(s) 66, 257, 527, 734, 1099
BseYI CCCAGC 2 cut(s) 518, 899
BsgI GTGCAG 1 cut(s) 534
Bsh1236I CGCG 1 cut(s) 501
Bsh1285I CGRYCG 1 cut(s) 1141
BshFI GGCC 7 cut(s) 318, 378, 396, 571, 940, 1392, 1627
BshNI GGYRCC 3 cut(s) 419, 785, 1403
BsiEI CGRYCG 1 cut(s) 1141
BsiHKAI GWGCWC 4 cut(s) 471, 606, 1698, 1725
BsiHKCI CYCGRG 2 cut(s) 459, 1341
BsiSI CCGG 4 cut(s) 572, 1116, 1124, 1342
BslFI GGGAC 1 cut(s) 536
BslI CCNNNNNNNGG 9 cut(s) 204, 325, 329, 567, 658, 773, 1168, 1194, 1342
BsmAI GTCTC 3 cut(s) 1539, 1580, 1766
BsmFI GGGAC 1 cut(s) 536
BsnI GGCC 7 cut(s) 318, 378, 396, 571, 940, 1392, 1627
BsoBI CYCGRG 2 cut(s) 459, 1341
Bsp1286I GDGCHC 6 cut(s) 471, 606, 1297, 1348, 1698, 1725
Bsp143I GATC 4 cut(s) 919, 1048, 1138, 1451
Bsp1720I GCTNAGC 1 cut(s) 614
BspANI GGCC 7 cut(s) 318, 378, 396, 571, 940, 1392, 1627
BspCNI CTCAG 4 cut(s) 49, 767, 1105, 1144
BspFNI CGCG 1 cut(s) 501
BspHI TCATGA 1 cut(s) 1297
BspLI GGNNCC 3 cut(s) 421, 787, 1405
BspMAI CTGCAG 1 cut(s) 958
BspMI ACCTGC 3 cut(s) 536, 649, 1080
BspPI GGATC 1 cut(s) 1459
BspQI GCTCTTC 3 cut(s) 1082, 1730, 1746
BspT107I GGYRCC 3 cut(s) 419, 785, 1403
BsrBI CCGCTC 2 cut(s) 458, 1658
BsrDI GCAATG 1 cut(s) 912
BsrFI RCCGGY 1 cut(s) 1115
BsrI ACTGG 4 cut(s) 420, 495, 741, 1199
BssAI RCCGGY 1 cut(s) 1115
BssECI CCNNGG 3 cut(s) 627, 978, 1341
BssMI GATC 4 cut(s) 919, 1048, 1138, 1451
BssNAI GTATAC 1 cut(s) 1527
BssNI GRCGYC 3 cut(s) 504, 525, 786
BssT1I CCWWGG 1 cut(s) 627
Bst1107I GTATAC 1 cut(s) 1527
Bst2UI CCWGG 4 cut(s) 272, 306, 424, 1389
Bst4CI ACNGT 4 cut(s) 186, 689, 1599, 1777
Bst6I CTCTTC 5 cut(s) 1082, 1183, 1488, 1730, 1746
BstACI GRCGYC 3 cut(s) 504, 525, 786
BstAPI GCANNNNNTGC 1 cut(s) 242
BstBAI YACGTR 2 cut(s) 314, 1524
BstC8I GCNNGC 4 cut(s) 376, 602, 1001, 1672
BstDEI CTNAG 5 cut(s) 57, 614, 754, 1092, 1152
BstDSI CCRYGG 1 cut(s) 978
BstEII GGTNACC 1 cut(s) 1432
BstF5I GGATG 2 cut(s) 763, 1577
BstFNI CGCG 1 cut(s) 501
BstH2I RGCGCY 2 cut(s) 789, 1330
BstHHI GCGC 3 cut(s) 651, 788, 1329
BstKTI GATC 4 cut(s) 922, 1051, 1141, 1454
BstMAI GTCTC 3 cut(s) 1539, 1580, 1766
BstMBI GATC 4 cut(s) 919, 1048, 1138, 1451
BstMCI CGRYCG 1 cut(s) 1141
BstMWI GCNNNNNNNGC 8 cut(s) 79, 242, 298, 577, 610, 655, 792, 1401
BstNI CCWGG 4 cut(s) 272, 306, 424, 1389
BstNSI RCATGY 1 cut(s) 1760
BstPI GGTNACC 1 cut(s) 1432
BstSCI CCNGG 7 cut(s) 270, 304, 422, 1123, 1340, 1341, 1387
BstSFI CTRYAG 2 cut(s) 685, 954
BstSLI GKGCMC 1 cut(s) 1348
BstSNI TACGTA 1 cut(s) 1524
BstUI CGCG 1 cut(s) 501
BstV1I GCAGC 5 cut(s) 66, 257, 527, 734, 1099
BstV2I GAAGAC 1 cut(s) 1030
BstX2I RGATCY 2 cut(s) 919, 1451
BstYI RGATCY 2 cut(s) 919, 1451
BstZ17I GTATAC 1 cut(s) 1527
Bsu36I CCTNAGG 1 cut(s) 1152
BsuRI GGCC 7 cut(s) 318, 378, 396, 571, 940, 1392, 1627
BtgI CCRYGG 1 cut(s) 978
BtsCI GGATG 2 cut(s) 763, 1577
BtsI GCAGTG 2 cut(s) 1637, 1761
BtsIMutI CAGTG 5 cut(s) 182, 748, 1192, 1637, 1761
BveI ACCTGC 3 cut(s) 536, 649, 1080
Cac8I GCNNGC 4 cut(s) 376, 602, 1001, 1672
CaiI CAGNNNCTG 1 cut(s) 429
CciI TCATGA 1 cut(s) 1297
CfoI GCGC 3 cut(s) 651, 788, 1329
Cfr10I RCCGGY 1 cut(s) 1115
Cfr13I GGNCC 6 cut(s) 308, 376, 395, 569, 661, 938
Cfr9I CCCGGG 1 cut(s) 1341
CseI GACGC 1 cut(s) 493
Csp6I GTAC 6 cut(s) 420, 558, 983, 1121, 1208, 1376
CviAII CATG 7 cut(s) 160, 261, 1298, 1321, 1372, 1462, 1757
CviQI GTAC 6 cut(s) 420, 558, 983, 1121, 1208, 1376
DdeI CTNAG 5 cut(s) 57, 614, 754, 1092, 1152
DinI GGCGCC 1 cut(s) 787
DpnI GATC 4 cut(s) 921, 1050, 1140, 1453
DpnII GATC 4 cut(s) 919, 1048, 1138, 1451
Eam1104I CTCTTC 5 cut(s) 1082, 1183, 1488, 1730, 1746
EarI CTCTTC 5 cut(s) 1082, 1183, 1488, 1730, 1746
EciI GGCGGA 1 cut(s) 442
Ecl136II GAGCTC 1 cut(s) 1723
Eco105I TACGTA 1 cut(s) 1524
Eco130I CCWWGG 1 cut(s) 627
Eco147I AGGCCT 1 cut(s) 1627
Eco24I GRGCYC 2 cut(s) 1297, 1725
Eco47I GGWCC 2 cut(s) 308, 661
Eco47III AGCGCT 1 cut(s) 1328
Eco53kI GAGCTC 1 cut(s) 1723
Eco72I CACGTG 1 cut(s) 314
Eco81I CCTNAGG 1 cut(s) 1152
Eco88I CYCGRG 2 cut(s) 459, 1341
Eco91I GGTNACC 1 cut(s) 1432
EcoICRI GAGCTC 1 cut(s) 1723
EcoO65I GGTNACC 1 cut(s) 1432
EcoRI GAATTC 1 cut(s) 152
EcoRII CCWGG 4 cut(s) 270, 304, 422, 1387
EcoT14I CCWWGG 1 cut(s) 627
EcoT38I GRGCYC 2 cut(s) 1297, 1725
EgeI GGCGCC 1 cut(s) 787
EheI GGCGCC 1 cut(s) 787
ErhI CCWWGG 1 cut(s) 627
FaeI CATG 7 cut(s) 163, 264, 1301, 1324, 1375, 1465, 1760
FalI AAGNNNNNCTT 4 cut(s) 1421, 1453, 1682, 1714
FaqI GGGAC 1 cut(s) 536
FatI CATG 7 cut(s) 159, 260, 1297, 1320, 1371, 1461, 1756
FauI CCCGC 3 cut(s) 330, 367, 533
FauNDI CATATG 1 cut(s) 1662
FbaI TGATCA 1 cut(s) 1048
FblI GTMKAC 2 cut(s) 1317, 1526
FokI GGATG 2 cut(s) 750, 1584
FriOI GRGCYC 2 cut(s) 1297, 1725
FspBI CTAG 1 cut(s) 881
GlaI GCGC 3 cut(s) 650, 787, 1328
GsaI CCCAGC 2 cut(s) 522, 903
GsuI CTGGAG 3 cut(s) 288, 293, 478
HaeII RGCGCY 2 cut(s) 789, 1330
HaeIII GGCC 7 cut(s) 318, 378, 396, 571, 940, 1392, 1627
HapII CCGG 4 cut(s) 572, 1116, 1124, 1342
HgaI GACGC 1 cut(s) 493
HhaI GCGC 3 cut(s) 651, 788, 1329
Hin1I GRCGYC 3 cut(s) 504, 525, 786
Hin1II CATG 7 cut(s) 163, 264, 1301, 1324, 1375, 1465, 1760
Hin6I GCGC 3 cut(s) 649, 786, 1327
HinP1I GCGC 3 cut(s) 649, 786, 1327
HincII GTYRAC 2 cut(s) 349, 709
HindII GTYRAC 2 cut(s) 349, 709
HindIII AAGCTT 1 cut(s) 872
HinfI GANTC 6 cut(s) 164, 285, 632, 1257, 1368, 1505
HpaII CCGG 4 cut(s) 572, 1116, 1124, 1342
HphI GGTGA 4 cut(s) 632, 730, 871, 1444
Hpy188I TCNGA 6 cut(s) 58, 193, 413, 665, 757, 1095
Hpy188III TCNNGA 6 cut(s) 104, 461, 607, 817, 1151, 1298
Hpy99I CGWCG 1 cut(s) 530
HpyAV CCTTC 4 cut(s) 459, 1172, 1199, 1673
HpyCH4III ACNGT 4 cut(s) 186, 689, 1599, 1777
HpyCH4IV ACGT 5 cut(s) 313, 488, 525, 947, 1523
HpyCH4V TGCA 9 cut(s) 67, 82, 245, 282, 515, 866, 917, 956, 1441
HpyF10VI GCNNNNNNNGC 8 cut(s) 79, 242, 298, 577, 610, 655, 792, 1401
HpyF3I CTNAG 5 cut(s) 57, 614, 754, 1092, 1152
HpySE526I ACGT 5 cut(s) 313, 488, 525, 947, 1523
Hsp92I GRCGYC 3 cut(s) 504, 525, 786
Hsp92II CATG 7 cut(s) 163, 264, 1301, 1324, 1375, 1465, 1760
HspAI GCGC 3 cut(s) 649, 786, 1327
KasI GGCGCC 1 cut(s) 785
KpnI GGTACC 1 cut(s) 423
Ksp22I TGATCA 1 cut(s) 1048
Kzo9I GATC 4 cut(s) 919, 1048, 1138, 1451
LguI GCTCTTC 3 cut(s) 1082, 1730, 1746
LmnI GCTCC 6 cut(s) 363, 414, 824, 908, 1324, 1693
Lsp1109I GCAGC 5 cut(s) 66, 257, 527, 734, 1099
LweI GCATC 2 cut(s) 25, 600
MaeI CTAG 1 cut(s) 881
MaeII ACGT 5 cut(s) 313, 488, 525, 947, 1523
MaeIII GTNAC 5 cut(s) 677, 1432, 1599, 1759, 1777
MalI GATC 4 cut(s) 921, 1050, 1140, 1453
MbiI CCGCTC 2 cut(s) 458, 1658
MboI GATC 4 cut(s) 919, 1048, 1138, 1451
MfeI CAATTG 1 cut(s) 508
MflI RGATCY 2 cut(s) 919, 1451
MhlI GDGCHC 6 cut(s) 471, 606, 1297, 1348, 1698, 1725
MluCI AATT 9 cut(s) 152, 169, 208, 237, 249, 508, 805, 969, 1028
Mly113I GGCGCC 1 cut(s) 786
MlyI GAGTC 2 cut(s) 626, 1362
MmeI TCCRAC 3 cut(s) 106, 436, 1203
MseI TTAA 3 cut(s) 51, 1512, 1797
MslI CAYNNNNRTG 1 cut(s) 716
MspA1I CMGCKG 3 cut(s) 325, 518, 1214
MspI CCGG 4 cut(s) 572, 1116, 1124, 1342
MspR9I CCNGG 7 cut(s) 272, 306, 424, 1125, 1342, 1343, 1389
MunI CAATTG 1 cut(s) 508
MvaI CCWGG 4 cut(s) 272, 306, 424, 1389
MvnI CGCG 1 cut(s) 501
MwoI GCNNNNNNNGC 8 cut(s) 79, 242, 298, 577, 610, 655, 792, 1401
NarI GGCGCC 1 cut(s) 786
NciI CCSGG 3 cut(s) 1125, 1342, 1343
NdeI CATATG 1 cut(s) 1662
NdeII GATC 4 cut(s) 919, 1048, 1138, 1451
NlaIII CATG 7 cut(s) 163, 264, 1301, 1324, 1375, 1465, 1760
NlaIV GGNNCC 3 cut(s) 421, 787, 1405
NmuCI GTSAC 2 cut(s) 1432, 1759
NspI RCATGY 1 cut(s) 1760
PaeR7I CTCGAG 1 cut(s) 459
PagI TCATGA 1 cut(s) 1297
PceI AGGCCT 1 cut(s) 1627
PciSI GCTCTTC 3 cut(s) 1082, 1730, 1746
PcsI WCGNNNNNNNCGW 1 cut(s) 702
PfeI GAWTC 4 cut(s) 164, 285, 1257, 1505
Ple19I CGATCG 1 cut(s) 1141
PleI GAGTC 2 cut(s) 626, 1362
PluTI GGCGCC 1 cut(s) 789
PmaCI CACGTG 1 cut(s) 314
PmlI CACGTG 1 cut(s) 314
PpsI GAGTC 2 cut(s) 626, 1362
Ppu21I YACGTR 2 cut(s) 314, 1524
PsiI TTATAA 1 cut(s) 1245
Psp124BI GAGCTC 1 cut(s) 1725
Psp6I CCWGG 4 cut(s) 270, 304, 422, 1387
PspCI CACGTG 1 cut(s) 314
PspEI GGTNACC 1 cut(s) 1432
PspFI CCCAGC 2 cut(s) 518, 899
PspGI CCWGG 4 cut(s) 270, 304, 422, 1387
PspN4I GGNNCC 3 cut(s) 421, 787, 1405
PspPI GGNCC 6 cut(s) 308, 376, 395, 569, 661, 938
PsrI GAACNNNNNNTAC 2 cut(s) 1088, 1120
PstI CTGCAG 1 cut(s) 958
PstNI CAGNNNCTG 1 cut(s) 429
PsuI RGATCY 2 cut(s) 919, 1451
PvuI CGATCG 1 cut(s) 1141
PvuII CAGCTG 1 cut(s) 518
RsaI GTAC 6 cut(s) 421, 559, 984, 1122, 1209, 1377
RsaNI GTAC 6 cut(s) 420, 558, 983, 1121, 1208, 1376
RseI CAYNNNNRTG 1 cut(s) 716
SacI GAGCTC 1 cut(s) 1725
SapI GCTCTTC 3 cut(s) 1082, 1730, 1746
SaqAI TTAA 3 cut(s) 51, 1512, 1797
Sau3AI GATC 4 cut(s) 919, 1048, 1138, 1451
Sau96I GGNCC 6 cut(s) 308, 376, 395, 569, 661, 938
SchI GAGTC 2 cut(s) 626, 1362
ScrFI CCNGG 7 cut(s) 272, 306, 424, 1125, 1342, 1343, 1389
SduI GDGCHC 6 cut(s) 471, 606, 1297, 1348, 1698, 1725
SfaNI GCATC 2 cut(s) 25, 600
SfcI CTRYAG 2 cut(s) 685, 954
SfoI GGCGCC 1 cut(s) 787
Sfr274I CTCGAG 1 cut(s) 459
SinI GGWCC 2 cut(s) 308, 661
SlaI CTCGAG 1 cut(s) 459
SmaI CCCGGG 1 cut(s) 1343
SmiMI CAYNNNNRTG 1 cut(s) 716
SmlI CTYRAG 4 cut(s) 459, 470, 605, 986
SmoI CTYRAG 4 cut(s) 459, 470, 605, 986
SnaBI TACGTA 1 cut(s) 1524
Sse9I AATT 9 cut(s) 152, 169, 208, 237, 249, 508, 805, 969, 1028
SseBI AGGCCT 1 cut(s) 1627
SspDI GGCGCC 1 cut(s) 785
SspI AATATT 1 cut(s) 1713
SspMI CTAG 1 cut(s) 881
SstI GAGCTC 1 cut(s) 1725
StuI AGGCCT 1 cut(s) 1627
StyD4I CCNGG 7 cut(s) 270, 304, 422, 1123, 1340, 1341, 1387
StyI CCWWGG 1 cut(s) 627
TaaI ACNGT 4 cut(s) 186, 689, 1599, 1777
TaiI ACGT 5 cut(s) 316, 491, 528, 950, 1526
TaqI TCGA 2 cut(s) 460, 1728
TasI AATT 9 cut(s) 152, 169, 208, 237, 249, 508, 805, 969, 1028
TauI GCSGC 6 cut(s) 295, 458, 504, 1395, 1645, 1658
TfiI GAWTC 4 cut(s) 164, 285, 1257, 1505
Tru1I TTAA 3 cut(s) 51, 1512, 1797
Tru9I TTAA 3 cut(s) 51, 1512, 1797
TscAI CASTG 5 cut(s) 189, 748, 1199, 1644, 1768
TseFI GTSAC 2 cut(s) 1432, 1759
TseI GCWGC 5 cut(s) 79, 245, 515, 722, 1112
Tsp45I GTSAC 2 cut(s) 1432, 1759
TspDTI ATGAA 5 cut(s) 148, 165, 785, 1296, 1314
TspGWI ACGGA 2 cut(s) 334, 1691
TspMI CCCGGG 1 cut(s) 1341
TspRI CASTG 5 cut(s) 189, 748, 1199, 1644, 1768
VpaK11BI GGWCC 2 cut(s) 308, 661
XapI RAATTY 3 cut(s) 152, 805, 1028
XceI RCATGY 1 cut(s) 1760
XhoI CTCGAG 1 cut(s) 459
XmaI CCCGGG 1 cut(s) 1341
XmiI GTMKAC 2 cut(s) 1317, 1526
XspI CTAG 1 cut(s) 881
ZraI GACGTC 1 cut(s) 526
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.