Prupe.5G228800_v2.0.a1
ERF Family

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000151
Physical Location & Seq
Reverse (-)
17534869 .. 17535856
988 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G228800.1

Sequence Viewer

Length: 891 bp
CTTGGGCCACATACGTTTCTTTCTGTTGAAAACATACTTGAAGCTGTAGAATTTAAGTATCAAGGCCAAGGCTTCAATTCTCAAATCCTGGAATTTCAAGTTTTCTTTAATGATCACACTTCAAATGATTTTAACATGCTTTTCAAATCCCTCCCTCAAAGCAGGCAATACTATGCTGCGGGTGTGCCTGGTTCTTTCTGTGGTCGCATATTTGCTAATGCTTCCATTCACCTTGTTCACTCTTCTTATGCCCTTCATTGGCTTTCTAGAGTACCAAAAGAGATAGTGGACATAGACAGTCCTGCTTGGAACAATGGTCGAATCGATTATTCAAATTCCACAGAGGAAGTAGTAAGGGCTTATGAAGCTCAATATGCCGAGGACATGGAGTGCTTCCTGCATGCCAGGGCACAAGAGATTGTGCATGGAGGATTGATGGTACTTATCATTCCAGGCCGCCCCAATGGTACCCCTCATTCTCTGACTGTGTCAAATGCGGTCCATCAACTTTTGGGATCTTGCCTCATGGACTTGGCTAGGAAGGGAGTAGTTAGGGAAGAGAAAGTAGATTCTTTTAATATACCTATCTATAACACGTCTCCTCAAGAACTGGAAGCTGCCGTAGAGAAAAATGGTTGTTTTAGCACAGAGAAAATGGAAAACTTACCTCGTATCTCGGCACTTGACATTGACAATGTTACTAGACGTGCCCAACTAATTGCATATCATATTAGAGCTACCACAGAGGGACTCATCAAGCAGCAATTTGGAGATGAAATCTTAGATGAGCTCTTTGGCTTGTATAGTAAGAAACTTGAACAGCAACCATCAATCTTTGAGTCAGGGAAGGCAATTAACTTTCTTCTTGTGCTCAAACGCAATGCAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_7

Protein Analysis

297

Amino Acids

33.33

Weight (kDa)

5.59

Isoelectric Point (pI)

46.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000151)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G37970 AT5G37990 AT5G38100 AT5G38100 AT5G38100 AT5G38100 AT5G38780 AT5G38780
fragaria_vesca FvH4_4g07940 FvH4_4g07950 FvH4_5g16970 FvH4_7g18490
malus_domestica MD02G1312100.v1.1 MD02G1312500.v1.1 MD05G1007900.v1.1 MD06G1223300.v1.1 MD06G1223500.v1.1 MD06G1223600.v1.1 MD06G1223700.v1.1 MD06G1223800.v1.1 MD06G1227300.v1.1 MD09G1253900.v1.1 MD09G1254000.v1.1 MD09G1254100.v1.1 MD09G1254200.v1.1 MD09G1254300.v1.1 MD10G1005200.v1.1 MD10G1005900.v1.1 MD14G1232400.v1.1 MD14G1232700.v1.1 MD14G1232800.v1.1 MD14G1232900.v1.1 MD14G1233000.v1.1 MD15G1255300.v1.1
prunus_persica Prupe.5G228400_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228600_v2.0.a1 Prupe.5G228700_v2.0.a1 Prupe.5G228800_v2.0.a1 Prupe.5G228900_v2.0.a1 Prupe.5G229000_v2.0.a1 Prupe.8G008300_v2.0.a1
pyrus_communis pycom02g26200 pycom02g26220 pycom05g00410 pycom06g19910 pycom06g19920 pycom06g19930 pycom06g19940 pycom06g20380 pycom09g16970 pycom09g16990 pycom09g17000 pycom10g00420 pycom14g19370 pycom14g19380 pycom14g19420 pycom14g19430 pycom15g22380 pycom15g22390
rosa_chinensis RchiOBHm_Chr1g0327241 RchiOBHm_Chr1g0327261 RchiOBHm_Chr2g0128631 RchiOBHm_Chr2g0137031 RchiOBHm_Chr3g0486031 RchiOBHm_Chr3g0486051 RchiOBHm_Chr3g0486091 RchiOBHm_Chr4g0400921 RchiOBHm_Chr4g0400971 RchiOBHm_Chr4g0400991 RchiOBHm_Chr7g0178281 RchiOBHm_Chr7g0178301 RchiOBHm_Chr7g0178321 RchiOBHm_Chr7g0178951 RchiOBHm_Chr7g0178961 RchiOBHm_Chr7g0178971 RchiOBHm_Chr7g0178991 RchiOBHm_Chr7g0179001 RchiOBHm_Chr7g0179021 RchiOBHm_Chr7g0179031 RchiOBHm_Chr7g0179041 RchiOBHm_Chr7g0179051 RchiOBHm_Chr7g0187641 RchiOBHm_Chr7g0201881 RchiOBHm_Chr7g0201901
rosa_laevigata RLG00000005390 RLG00000005391 RLG00000005392 RLG00000005394 RLG00000005456 RLG00000009163 RLG00000009164 RLG00000019598 RLG00000023105 RLG00000030028
rosa_multiflora Rmu_co8337425.1_g000001 Rmu_sc0000795.1_g000125 Rmu_sc0000837.1_g000085 Rmu_sc0000888.1_g000008 Rmu_sc0000888.1_g000010 Rmu_sc0000888.1_g000011 Rmu_sc0000888.1_g000013 Rmu_sc0001021.1_g000003 Rmu_sc0001021.1_g000004 Rmu_sc0001021.1_g000006 Rmu_sc0001374.1_g000046 Rmu_sc0002026.1_g000007 Rmu_sc0002026.1_g000019 Rmu_sc0003465.1_g000046 Rmu_sc0004483.1_g000006 Rmu_sc0006229.1_g000002 Rmu_sc0006736.1_g000019 Rmu_sc0006736.1_g000027 Rmu_sc0007073.1_g000003 Rmu_sc0036373.1_g000001 Rmu_ssc0000009.1_g000007
rosa_roxburghii Rroxscaffold_2G00107760 Rroxscaffold_2G00115440 Rroxscaffold_2G00115920 Rroxscaffold_3G00255030 Rroxscaffold_3G00267200 Rroxscaffold_3G00274440 Rroxscaffold_3G00274450 Rroxscaffold_3G00274480 Rroxscaffold_4G00322940 Rroxscaffold_4G00322950 Rroxscaffold_4G00322980 Rroxscaffold_4G00323000 Rroxscaffold_4G00323020 Rroxscaffold_5G00345860 Rroxscaffold_5G00345890 Rroxscaffold_5G00345920 Rroxscaffold_6G00396060 Rroxscaffold_6G00396070
rosa_rugosa Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064800 Rorug01G0297000 Rorug02G0279500 Rorug02G0337300 Rorug03G0223300 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223500 Rorug03G0223600 Rorug04G0027400 Rorug04G0027500 Rorug04G0027600 Rorug06G0420600 Rorug06G0420600 Rorug06G0483400 Rorug07G0066400 Rorug07G0066600
rosa_samantha Rh1AG081900 Rh1AG082300 Rh1AG082400 Rh1AG305600 Rh2BG340800 Rh2BG393000 Rh3BG308300 Rh4CG113300 Rh4CG113700 Rh7CG020600 Rh7CG020700 Rh7CG020800 Rh7CG021000 Rh7CG088900 Rh7CG204900
rosa_wichuraiana Rw0G002670 Rw0G014940 Rw0G021450 Rw1G006470 Rw1G006490 Rw2G026880 Rw2G027140 Rw2G031610 Rw3G024210 Rw3G024220 Rw7G001620 Rw7G001630 Rw7G001640 Rw7G001650 Rw7G016930 Rw7G016950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 467
AccB1I GGYRCC 1 cut(s) 467
AciI CCGC 3 cut(s) 179, 457, 497
AclWI GGATC 1 cut(s) 523
AcsI RAATTY 3 cut(s) 50, 92, 334
AfaI GTAC 3 cut(s) 273, 441, 469
AfiI CCNNNNNNNGG 1 cut(s) 258
AflIII ACRYGT 1 cut(s) 594
AgsI TTSAA 8 cut(s) 29, 41, 76, 98, 123, 145, 333, 818
AjiI CACGTC 2 cut(s) 597, 707
AjnI CCWGG 4 cut(s) 87, 187, 404, 451
AluBI AGCT 5 cut(s) 44, 368, 617, 737, 790
AluI AGCT 5 cut(s) 44, 368, 617, 737, 790
Alw21I GWGCWC 2 cut(s) 792, 873
Alw26I GTCTC 1 cut(s) 603
AlwI GGATC 1 cut(s) 523
AoxI GGCC 3 cut(s) 5, 64, 454
ApeKI GCWGC 3 cut(s) 176, 617, 760
ApoI RAATTY 3 cut(s) 50, 92, 334
Asp718I GGTACC 1 cut(s) 467
AspS9I GGNCC 2 cut(s) 5, 499
AsuHPI GGTGA 1 cut(s) 221
AvaII GGWCC 1 cut(s) 499
BaeGI GKGCMC 2 cut(s) 412, 712
BanI GGYRCC 1 cut(s) 467
BanII GRGCYC 1 cut(s) 792
Bbv12I GWGCWC 2 cut(s) 792, 873
BbvI GCAGC 3 cut(s) 163, 604, 772
BccI CCATC 3 cut(s) 430, 510, 835
BceAI ACGGC 1 cut(s) 605
BciT130I CCWGG 4 cut(s) 89, 189, 406, 453
BclI TGATCA 1 cut(s) 112
BcoDI GTCTC 1 cut(s) 603
BfaI CTAG 3 cut(s) 267, 537, 702
BfmI CTRYAG 1 cut(s) 45
BisI GCNGC 4 cut(s) 177, 457, 618, 761
BlsI GCNGC 4 cut(s) 178, 458, 619, 762
Bme1390I CCNGG 4 cut(s) 89, 189, 406, 453
Bme18I GGWCC 1 cut(s) 499
BmgBI CACGTC 2 cut(s) 597, 707
BmgT120I GGNCC 2 cut(s) 5, 499
BmiI GGNNCC 1 cut(s) 469
BmrFI CCNGG 4 cut(s) 89, 189, 406, 453
BpuEI CTTGAG 1 cut(s) 588
Bsa29I ATCGAT 1 cut(s) 324
BsaJI CCNNGG 3 cut(s) 67, 378, 405
Bsc4I CCNNNNNNNGG 1 cut(s) 258
Bse1I ACTGG 1 cut(s) 615
Bse3DI GCAATG 1 cut(s) 886
BseBI CCWGG 4 cut(s) 89, 189, 406, 453
BseCI ATCGAT 1 cut(s) 324
BseDI CCNNGG 3 cut(s) 67, 378, 405
BseLI CCNNNNNNNGG 1 cut(s) 258
BseMI GCAATG 1 cut(s) 886
BseNI ACTGG 1 cut(s) 615
BseRI GAGGAG 1 cut(s) 591
BseSI GKGCMC 2 cut(s) 412, 712
BseXI GCAGC 3 cut(s) 163, 604, 772
BshFI GGCC 3 cut(s) 7, 66, 456
BshNI GGYRCC 1 cut(s) 467
BshVI ATCGAT 1 cut(s) 324
BsiHKAI GWGCWC 2 cut(s) 792, 873
BslFI GGGAC 1 cut(s) 762
BslI CCNNNNNNNGG 1 cut(s) 258
BsmAI GTCTC 1 cut(s) 603
BsmBI CGTCTC 1 cut(s) 603
BsmFI GGGAC 1 cut(s) 762
BsnI GGCC 3 cut(s) 7, 66, 456
Bsp1286I GDGCHC 4 cut(s) 412, 712, 792, 873
Bsp143I GATC 2 cut(s) 112, 515
BspACI CCGC 3 cut(s) 179, 457, 497
BspANI GGCC 3 cut(s) 7, 66, 456
BspDI ATCGAT 1 cut(s) 324
BspLI GGNNCC 1 cut(s) 469
BspPI GGATC 1 cut(s) 523
BspT107I GGYRCC 1 cut(s) 467
BsrDI GCAATG 1 cut(s) 886
BsrI ACTGG 1 cut(s) 615
BssECI CCNNGG 3 cut(s) 67, 378, 405
BssMI GATC 2 cut(s) 112, 515
BssT1I CCWWGG 1 cut(s) 67
Bst2UI CCWGG 4 cut(s) 89, 189, 406, 453
Bst4CI ACNGT 2 cut(s) 299, 487
Bst6I CTCTTC 2 cut(s) 247, 552
BstC8I GCNNGC 2 cut(s) 164, 402
BstDEI CTNAG 1 cut(s) 781
BstKTI GATC 2 cut(s) 115, 518
BstMAI GTCTC 1 cut(s) 603
BstMBI GATC 2 cut(s) 112, 515
BstMWI GCNNNNNNNGC 2 cut(s) 365, 374
BstNI CCWGG 4 cut(s) 89, 189, 406, 453
BstNSI RCATGY 2 cut(s) 139, 404
BstSCI CCNGG 4 cut(s) 87, 187, 404, 451
BstSFI CTRYAG 1 cut(s) 45
BstSLI GKGCMC 2 cut(s) 412, 712
BstV1I GCAGC 3 cut(s) 163, 604, 772
BstX2I RGATCY 1 cut(s) 515
BstYI RGATCY 1 cut(s) 515
Bsu15I ATCGAT 1 cut(s) 324
BsuRI GGCC 3 cut(s) 7, 66, 456
BsuTUI ATCGAT 1 cut(s) 324
BtrI CACGTC 2 cut(s) 597, 707
Cac8I GCNNGC 2 cut(s) 164, 402
Cfr13I GGNCC 2 cut(s) 5, 499
ClaI ATCGAT 1 cut(s) 324
Csp6I GTAC 3 cut(s) 272, 440, 468
CviAII CATG 5 cut(s) 136, 385, 401, 425, 526
CviQI GTAC 3 cut(s) 272, 440, 468
DdeI CTNAG 1 cut(s) 781
DpnI GATC 2 cut(s) 114, 517
DpnII GATC 2 cut(s) 112, 515
Eam1104I CTCTTC 2 cut(s) 247, 552
EarI CTCTTC 2 cut(s) 247, 552
Ecl136II GAGCTC 1 cut(s) 790
Eco130I CCWWGG 1 cut(s) 67
Eco24I GRGCYC 1 cut(s) 792
Eco47I GGWCC 1 cut(s) 499
Eco53kI GAGCTC 1 cut(s) 790
EcoICRI GAGCTC 1 cut(s) 790
EcoRII CCWGG 4 cut(s) 87, 187, 404, 451
EcoT14I CCWWGG 1 cut(s) 67
EcoT38I GRGCYC 1 cut(s) 792
ErhI CCWWGG 1 cut(s) 67
Esp3I CGTCTC 1 cut(s) 603
FaeI CATG 5 cut(s) 139, 388, 404, 428, 529
FaqI GGGAC 1 cut(s) 762
FatI CATG 5 cut(s) 135, 384, 400, 424, 525
FauI CCCGC 1 cut(s) 172
FbaI TGATCA 1 cut(s) 112
Fnu4HI GCNGC 4 cut(s) 177, 457, 618, 761
FriOI GRGCYC 1 cut(s) 792
Fsp4HI GCNGC 4 cut(s) 177, 457, 618, 761
FspBI CTAG 3 cut(s) 267, 537, 702
GluI GCNGC 4 cut(s) 177, 457, 618, 761
HaeIII GGCC 3 cut(s) 7, 66, 456
Hin1II CATG 5 cut(s) 139, 388, 404, 428, 529
HinfI GANTC 4 cut(s) 321, 569, 750, 839
HphI GGTGA 1 cut(s) 221
Hpy166II GTNNAC 2 cut(s) 238, 289
Hpy188I TCNGA 1 cut(s) 483
Hpy188III TCNNGA 2 cut(s) 267, 605
Hpy8I GTNNAC 2 cut(s) 238, 289
HpyAV CCTTC 3 cut(s) 263, 535, 841
HpyCH4III ACNGT 2 cut(s) 299, 487
HpyCH4IV ACGT 3 cut(s) 14, 596, 706
HpyCH4V TGCA 4 cut(s) 400, 424, 722, 884
HpyF10VI GCNNNNNNNGC 2 cut(s) 365, 374
HpyF3I CTNAG 1 cut(s) 781
HpySE526I ACGT 3 cut(s) 14, 596, 706
Hsp92II CATG 5 cut(s) 139, 388, 404, 428, 529
KpnI GGTACC 1 cut(s) 471
Ksp22I TGATCA 1 cut(s) 112
Kzo9I GATC 2 cut(s) 112, 515
Lsp1109I GCAGC 3 cut(s) 163, 604, 772
MaeI CTAG 3 cut(s) 267, 537, 702
MaeII ACGT 3 cut(s) 14, 596, 706
MaeIII GTNAC 1 cut(s) 697
MalI GATC 2 cut(s) 114, 517
MboI GATC 2 cut(s) 112, 515
MboII GAAGA 3 cut(s) 234, 569, 854
MflI RGATCY 1 cut(s) 515
MhlI GDGCHC 4 cut(s) 412, 712, 792, 873
MluCI AATT 8 cut(s) 50, 76, 92, 334, 717, 764, 852, 886
MlyI GAGTC 2 cut(s) 744, 848
MseI TTAA 5 cut(s) 54, 108, 132, 576, 855
MspR9I CCNGG 4 cut(s) 89, 189, 406, 453
MvaI CCWGG 4 cut(s) 89, 189, 406, 453
MwoI GCNNNNNNNGC 2 cut(s) 365, 374
NdeII GATC 2 cut(s) 112, 515
NlaIII CATG 5 cut(s) 139, 388, 404, 428, 529
NlaIV GGNNCC 1 cut(s) 469
NmeAIII GCCGAG 2 cut(s) 403, 656
NspI RCATGY 2 cut(s) 139, 404
PaeI GCATGC 1 cut(s) 404
PfeI GAWTC 2 cut(s) 321, 569
PflFI GACNNNGTC 1 cut(s) 487
PfoI TCCNGGA 1 cut(s) 87
PkrI GCNGC 4 cut(s) 178, 458, 619, 762
PleI GAGTC 2 cut(s) 744, 847
PpsI GAGTC 2 cut(s) 744, 847
Psp124BI GAGCTC 1 cut(s) 792
Psp6I CCWGG 4 cut(s) 87, 187, 404, 451
PspGI CCWGG 4 cut(s) 87, 187, 404, 451
PspN4I GGNNCC 1 cut(s) 469
PspPI GGNCC 2 cut(s) 5, 499
PsuI RGATCY 1 cut(s) 515
PsyI GACNNNGTC 1 cut(s) 487
RsaI GTAC 3 cut(s) 273, 441, 469
RsaNI GTAC 3 cut(s) 272, 440, 468
SacI GAGCTC 1 cut(s) 792
SaqAI TTAA 5 cut(s) 54, 108, 132, 576, 855
SatI GCNGC 4 cut(s) 177, 457, 618, 761
Sau3AI GATC 2 cut(s) 112, 515
Sau96I GGNCC 2 cut(s) 5, 499
SchI GAGTC 2 cut(s) 744, 848
ScrFI CCNGG 4 cut(s) 89, 189, 406, 453
SduI GDGCHC 4 cut(s) 412, 712, 792, 873
SfcI CTRYAG 1 cut(s) 45
SinI GGWCC 1 cut(s) 499
SmlI CTYRAG 1 cut(s) 603
SmoI CTYRAG 1 cut(s) 603
SphI GCATGC 1 cut(s) 404
Sse9I AATT 8 cut(s) 50, 76, 92, 334, 717, 764, 852, 886
SsiI CCGC 3 cut(s) 179, 457, 497
SspMI CTAG 3 cut(s) 267, 537, 702
SstI GAGCTC 1 cut(s) 792
StyD4I CCNGG 4 cut(s) 87, 187, 404, 451
StyI CCWWGG 1 cut(s) 67
TaaI ACNGT 2 cut(s) 299, 487
TaiI ACGT 3 cut(s) 17, 599, 709
TaqI TCGA 2 cut(s) 319, 324
TasI AATT 8 cut(s) 50, 76, 92, 334, 717, 764, 852, 886
TauI GCSGC 1 cut(s) 459
TfiI GAWTC 2 cut(s) 321, 569
Tru1I TTAA 5 cut(s) 54, 108, 132, 576, 855
Tru9I TTAA 5 cut(s) 54, 108, 132, 576, 855
TseI GCWGC 3 cut(s) 176, 617, 760
TspDTI ATGAA 3 cut(s) 245, 378, 789
Tth111I GACNNNGTC 1 cut(s) 487
VpaK11BI GGWCC 1 cut(s) 499
XapI RAATTY 3 cut(s) 50, 92, 334
XbaI TCTAGA 1 cut(s) 266
XceI RCATGY 2 cut(s) 139, 404
XspI CTAG 3 cut(s) 267, 537, 702
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.