MD09G1254200.v1.1

methyltransferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0000151
Physical Location & Seq
Forward (+)
32556689 .. 32558030
1342 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1254200.v1.1.491

Sequence Viewer

Length: 921 bp
ATGTTTTTACCATTCAACACCTTCCATATTGCAGATTTGGGTTGTTCGGTTGGGCCTAATACATTTTTTTCTGTTGAAAATATACTTGAAGCTGTGAAATTTGAGTATCAAAGCGGAGGGCCGAGTTCTGAAGTCCCCAAATTTCAAGTTTTCTTCAGTGATAAAACCCTAAATGATTTTAACATACTCTTCAATTACCTCCCTCAGAACAGGAACTATTATGCAGCGGGTGTGCCAGGTTCTTTCCACGGTCGCTTGTTTCCCAAGGCTTCCATTAACTTTTTTCACTCTTCATTAGCCCTTCATTGGCTTTCTAGGGTACCAAAAGATGTAATGGACAAAAACAGTCGTGCTTGGAATAAAGGACGAATCCACTACTCAAATAACCAAGACGAAGTATTGAAGGCATATCAATCTCAATATGCTGAGGACATGGATTGTTTCCTCCGTGCCAGAGCACTTGAGACTGTGCATCGAGGATTGATTGTGCTTAACCTATTAGGACTCCCCAATGATATCCCTCAGTCTCATCACTTAATTGGAAATTTGGCTATTGACATTTTAGGATCTTGCCTTGTGGAGATGGCTAGGAAGGGGGTAATTAGTGAAGAAAAAGTGGATTCATTTAACATGCCTTGCTATTTCGCATCTCCCCAAGAACTGGAAATCATTGTGGAACGAAATGGATGTTTTAGCACAGAGATATTGGAAGCCTTACCACAGCATGTCTCGAAACATGGCACTCCCAGTGCTCCAACTTTTAGAGCTATCACAGAGGGACTCATCACGCAACAATTTGGAGAAGAAATCTTAGGTGTTCTCTTCAGCTTGTATCAGCAGAAACTTGAAGAGCAAATCTCAATAGCTGAGTCAAAGAAGTCAGCTGTCATTTTTGTTGTGCTTAAACGCAAGACAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_7

Protein Analysis

307

Amino Acids

34.51

Weight (kDa)

6.21

Isoelectric Point (pI)

52.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_7 PF03492 6 - 303 1.6e-96 SAM dependent carboxyl methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000151)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G37970 AT5G37990 AT5G38100 AT5G38100 AT5G38100 AT5G38100 AT5G38780 AT5G38780
fragaria_vesca FvH4_4g07940 FvH4_4g07950 FvH4_5g16970 FvH4_7g18490
malus_domestica MD02G1312100.v1.1 MD02G1312500.v1.1 MD05G1007900.v1.1 MD06G1223300.v1.1 MD06G1223500.v1.1 MD06G1223600.v1.1 MD06G1223700.v1.1 MD06G1223800.v1.1 MD06G1227300.v1.1 MD09G1253900.v1.1 MD09G1254000.v1.1 MD09G1254100.v1.1 MD09G1254200.v1.1 MD09G1254300.v1.1 MD10G1005200.v1.1 MD10G1005900.v1.1 MD14G1232400.v1.1 MD14G1232700.v1.1 MD14G1232800.v1.1 MD14G1232900.v1.1 MD14G1233000.v1.1 MD15G1255300.v1.1
prunus_persica Prupe.5G228400_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228600_v2.0.a1 Prupe.5G228700_v2.0.a1 Prupe.5G228800_v2.0.a1 Prupe.5G228900_v2.0.a1 Prupe.5G229000_v2.0.a1 Prupe.8G008300_v2.0.a1
pyrus_communis pycom02g26200 pycom02g26220 pycom05g00410 pycom06g19910 pycom06g19920 pycom06g19930 pycom06g19940 pycom06g20380 pycom09g16970 pycom09g16990 pycom09g17000 pycom10g00420 pycom14g19370 pycom14g19380 pycom14g19420 pycom14g19430 pycom15g22380 pycom15g22390
rosa_chinensis RchiOBHm_Chr1g0327241 RchiOBHm_Chr1g0327261 RchiOBHm_Chr2g0128631 RchiOBHm_Chr2g0137031 RchiOBHm_Chr3g0486031 RchiOBHm_Chr3g0486051 RchiOBHm_Chr3g0486091 RchiOBHm_Chr4g0400921 RchiOBHm_Chr4g0400971 RchiOBHm_Chr4g0400991 RchiOBHm_Chr7g0178281 RchiOBHm_Chr7g0178301 RchiOBHm_Chr7g0178321 RchiOBHm_Chr7g0178951 RchiOBHm_Chr7g0178961 RchiOBHm_Chr7g0178971 RchiOBHm_Chr7g0178991 RchiOBHm_Chr7g0179001 RchiOBHm_Chr7g0179021 RchiOBHm_Chr7g0179031 RchiOBHm_Chr7g0179041 RchiOBHm_Chr7g0179051 RchiOBHm_Chr7g0187641 RchiOBHm_Chr7g0201881 RchiOBHm_Chr7g0201901
rosa_laevigata RLG00000005390 RLG00000005391 RLG00000005392 RLG00000005394 RLG00000005456 RLG00000009163 RLG00000009164 RLG00000019598 RLG00000023105 RLG00000030028
rosa_multiflora Rmu_co8337425.1_g000001 Rmu_sc0000795.1_g000125 Rmu_sc0000837.1_g000085 Rmu_sc0000888.1_g000008 Rmu_sc0000888.1_g000010 Rmu_sc0000888.1_g000011 Rmu_sc0000888.1_g000013 Rmu_sc0001021.1_g000003 Rmu_sc0001021.1_g000004 Rmu_sc0001021.1_g000006 Rmu_sc0001374.1_g000046 Rmu_sc0002026.1_g000007 Rmu_sc0002026.1_g000019 Rmu_sc0003465.1_g000046 Rmu_sc0004483.1_g000006 Rmu_sc0006229.1_g000002 Rmu_sc0006736.1_g000019 Rmu_sc0006736.1_g000027 Rmu_sc0007073.1_g000003 Rmu_sc0036373.1_g000001 Rmu_ssc0000009.1_g000007
rosa_roxburghii Rroxscaffold_2G00107760 Rroxscaffold_2G00115440 Rroxscaffold_2G00115920 Rroxscaffold_3G00255030 Rroxscaffold_3G00267200 Rroxscaffold_3G00274440 Rroxscaffold_3G00274450 Rroxscaffold_3G00274480 Rroxscaffold_4G00322940 Rroxscaffold_4G00322950 Rroxscaffold_4G00322980 Rroxscaffold_4G00323000 Rroxscaffold_4G00323020 Rroxscaffold_5G00345860 Rroxscaffold_5G00345890 Rroxscaffold_5G00345920 Rroxscaffold_6G00396060 Rroxscaffold_6G00396070
rosa_rugosa Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064800 Rorug01G0297000 Rorug02G0279500 Rorug02G0337300 Rorug03G0223300 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223500 Rorug03G0223600 Rorug04G0027400 Rorug04G0027500 Rorug04G0027600 Rorug06G0420600 Rorug06G0420600 Rorug06G0483400 Rorug07G0066400 Rorug07G0066600
rosa_samantha Rh1AG081900 Rh1AG082300 Rh1AG082400 Rh1AG305600 Rh2BG340800 Rh2BG393000 Rh3BG308300 Rh4CG113300 Rh4CG113700 Rh7CG020600 Rh7CG020700 Rh7CG020800 Rh7CG021000 Rh7CG088900 Rh7CG204900
rosa_wichuraiana Rw0G002670 Rw0G014940 Rw0G021450 Rw1G006470 Rw1G006490 Rw2G026880 Rw2G027140 Rw2G031610 Rw3G024210 Rw3G024220 Rw7G001620 Rw7G001630 Rw7G001640 Rw7G001650 Rw7G016930 Rw7G016950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 319
AccB1I GGYRCC 1 cut(s) 319
AccB7I CCANNNNNTGG 1 cut(s) 661
AciI CCGC 2 cut(s) 114, 227
AclWI GGATC 1 cut(s) 574
AcsI RAATTY 3 cut(s) 98, 140, 544
AcuI CTGAAG 3 cut(s) 139, 150, 808
AfaI GTAC 1 cut(s) 321
AfiI CCNNNNNNNGG 2 cut(s) 306, 661
AgsI TTSAA 7 cut(s) 16, 77, 89, 146, 193, 403, 848
AjnI CCWGG 1 cut(s) 235
AluBI AGCT 5 cut(s) 92, 767, 828, 866, 884
AluI AGCT 5 cut(s) 92, 767, 828, 866, 884
Alw21I GWGCWC 2 cut(s) 460, 754
Alw26I GTCTC 3 cut(s) 458, 531, 733
AlwI GGATC 1 cut(s) 574
AoxI GGCC 2 cut(s) 53, 119
ApeKI GCWGC 1 cut(s) 224
ApoI RAATTY 3 cut(s) 98, 140, 544
Asp718I GGTACC 1 cut(s) 319
AspS9I GGNCC 2 cut(s) 53, 119
BanI GGYRCC 1 cut(s) 319
Bbv12I GWGCWC 2 cut(s) 460, 754
BbvCI CCTCAGC 1 cut(s) 426
BbvI GCAGC 1 cut(s) 236
BccI CCATC 1 cut(s) 577
BciT130I CCWGG 1 cut(s) 237
BcoDI GTCTC 3 cut(s) 458, 531, 733
BfaI CTAG 2 cut(s) 315, 588
BisI GCNGC 1 cut(s) 225
BlsI GCNGC 1 cut(s) 226
Bme1390I CCNGG 1 cut(s) 237
BmgT120I GGNCC 2 cut(s) 53, 119
BmiI GGNNCC 1 cut(s) 321
BmrFI CCNGG 1 cut(s) 237
BmrI ACTGGG 1 cut(s) 741
BmsI GCATC 2 cut(s) 481, 656
BmuI ACTGGG 1 cut(s) 741
BplI GAGNNNNNCTC 2 cut(s) 842, 874
Bpu10I CCTNAGC 1 cut(s) 426
BpuEI CTTGAG 1 cut(s) 482
BsaJI CCNNGG 2 cut(s) 247, 264
Bsc4I CCNNNNNNNGG 2 cut(s) 306, 661
Bse1I ACTGG 2 cut(s) 666, 747
BseBI CCWGG 1 cut(s) 237
BseDI CCNNGG 2 cut(s) 247, 264
BseGI GGATG 1 cut(s) 692
BseLI CCNNNNNNNGG 2 cut(s) 306, 661
BseMII CTCAG 4 cut(s) 218, 417, 536, 858
BseNI ACTGG 2 cut(s) 666, 747
BseXI GCAGC 1 cut(s) 236
Bsh1285I CGRYCG 1 cut(s) 253
BshFI GGCC 2 cut(s) 55, 121
BshNI GGYRCC 1 cut(s) 319
BsiEI CGRYCG 1 cut(s) 253
BsiHKAI GWGCWC 2 cut(s) 460, 754
BslFI GGGAC 2 cut(s) 119, 792
BslI CCNNNNNNNGG 2 cut(s) 306, 661
BsmAI GTCTC 3 cut(s) 458, 531, 733
BsmFI GGGAC 2 cut(s) 119, 792
BsnI GGCC 2 cut(s) 55, 121
Bsp1286I GDGCHC 2 cut(s) 460, 754
Bsp143I GATC 1 cut(s) 566
BspACI CCGC 2 cut(s) 114, 227
BspANI GGCC 2 cut(s) 55, 121
BspCNI CTCAG 4 cut(s) 217, 418, 535, 859
BspLI GGNNCC 1 cut(s) 321
BspPI GGATC 1 cut(s) 574
BspQI GCTCTTC 1 cut(s) 843
BspT107I GGYRCC 1 cut(s) 319
BsrI ACTGG 2 cut(s) 666, 747
BssECI CCNNGG 2 cut(s) 247, 264
BssMI GATC 1 cut(s) 566
BssT1I CCWWGG 1 cut(s) 264
Bst2UI CCWGG 1 cut(s) 237
Bst4CI ACNGT 3 cut(s) 251, 347, 469
Bst6I CTCTTC 4 cut(s) 194, 295, 827, 843
BstDEI CTNAG 5 cut(s) 204, 426, 522, 811, 867
BstDSI CCRYGG 1 cut(s) 247
BstF5I GGATG 1 cut(s) 692
BstKTI GATC 1 cut(s) 569
BstMAI GTCTC 3 cut(s) 458, 531, 733
BstMBI GATC 1 cut(s) 566
BstMCI CGRYCG 1 cut(s) 253
BstNI CCWGG 1 cut(s) 237
BstNSI RCATGY 2 cut(s) 634, 728
BstSCI CCNGG 1 cut(s) 235
BstV1I GCAGC 1 cut(s) 236
BstX2I RGATCY 1 cut(s) 566
BstYI RGATCY 1 cut(s) 566
BsuRI GGCC 2 cut(s) 55, 121
BtgI CCRYGG 1 cut(s) 247
BtsCI GGATG 1 cut(s) 692
BtsIMutI CAGTG 2 cut(s) 163, 754
Cfr13I GGNCC 2 cut(s) 53, 119
Csp6I GTAC 1 cut(s) 320
CviAII CATG 4 cut(s) 433, 631, 725, 737
CviQI GTAC 1 cut(s) 320
DdeI CTNAG 5 cut(s) 204, 426, 522, 811, 867
DpnI GATC 1 cut(s) 568
DpnII GATC 1 cut(s) 566
Eam1104I CTCTTC 4 cut(s) 194, 295, 827, 843
EarI CTCTTC 4 cut(s) 194, 295, 827, 843
Eco130I CCWWGG 1 cut(s) 264
Eco32I GATATC 1 cut(s) 517
Eco57I CTGAAG 3 cut(s) 139, 150, 808
EcoRII CCWGG 1 cut(s) 235
EcoRV GATATC 1 cut(s) 517
EcoT14I CCWWGG 1 cut(s) 264
ErhI CCWWGG 1 cut(s) 264
FaeI CATG 4 cut(s) 436, 634, 728, 740
FaqI GGGAC 2 cut(s) 119, 792
FatI CATG 4 cut(s) 432, 630, 724, 736
FauI CCCGC 1 cut(s) 220
Fnu4HI GCNGC 1 cut(s) 225
FokI GGATG 1 cut(s) 699
Fsp4HI GCNGC 1 cut(s) 225
FspBI CTAG 2 cut(s) 315, 588
GluI GCNGC 1 cut(s) 225
HaeIII GGCC 2 cut(s) 55, 121
Hin1II CATG 4 cut(s) 436, 634, 728, 740
HinfI GANTC 5 cut(s) 369, 504, 620, 780, 869
Hpy188I TCNGA 2 cut(s) 130, 207
Hpy188III TCNNGA 1 cut(s) 730
HpyAV CCTTC 4 cut(s) 31, 311, 397, 586
HpyCH4III ACNGT 3 cut(s) 251, 347, 469
HpyCH4V TGCA 3 cut(s) 32, 224, 472
HpyF3I CTNAG 5 cut(s) 204, 426, 522, 811, 867
Hsp92II CATG 4 cut(s) 436, 634, 728, 740
KpnI GGTACC 1 cut(s) 323
Kzo9I GATC 1 cut(s) 566
LguI GCTCTTC 1 cut(s) 843
LmnI GCTCC 1 cut(s) 757
LpnPI CCDG 6 cut(s) 196, 222, 249, 466, 647, 760
Lsp1109I GCAGC 1 cut(s) 236
LweI GCATC 2 cut(s) 481, 656
MaeI CTAG 2 cut(s) 315, 588
MalI GATC 1 cut(s) 568
MboI GATC 1 cut(s) 566
MboII GAAGA 7 cut(s) 145, 181, 282, 620, 814, 815, 860
MflI RGATCY 1 cut(s) 566
MhlI GDGCHC 2 cut(s) 460, 754
MluCI AATT 8 cut(s) 98, 140, 193, 537, 544, 600, 794, 916
MlyI GAGTC 3 cut(s) 498, 774, 878
MmeI TCCRAC 1 cut(s) 779
MnlI CCTC 8 cut(s) 110, 209, 213, 421, 455, 470, 531, 769
MseI TTAA 6 cut(s) 180, 276, 492, 536, 627, 903
MspA1I CMGCKG 2 cut(s) 227, 884
MspR9I CCNGG 1 cut(s) 237
MvaI CCWGG 1 cut(s) 237
NdeII GATC 1 cut(s) 566
NlaIII CATG 4 cut(s) 436, 634, 728, 740
NlaIV GGNNCC 1 cut(s) 321
NmeAIII GCCGAG 1 cut(s) 147
NspI RCATGY 2 cut(s) 634, 728
PciSI GCTCTTC 1 cut(s) 843
PfeI GAWTC 2 cut(s) 369, 620
PflMI CCANNNNNTGG 1 cut(s) 661
PkrI GCNGC 1 cut(s) 226
PleI GAGTC 3 cut(s) 498, 774, 877
PpsI GAGTC 3 cut(s) 498, 774, 877
Psp6I CCWGG 1 cut(s) 235
PspGI CCWGG 1 cut(s) 235
PspN4I GGNNCC 1 cut(s) 321
PspPI GGNCC 2 cut(s) 53, 119
PsuI RGATCY 1 cut(s) 566
PvuII CAGCTG 1 cut(s) 884
RsaI GTAC 1 cut(s) 321
RsaNI GTAC 1 cut(s) 320
SapI GCTCTTC 1 cut(s) 843
SaqAI TTAA 6 cut(s) 180, 276, 492, 536, 627, 903
SatI GCNGC 1 cut(s) 225
Sau3AI GATC 1 cut(s) 566
Sau96I GGNCC 2 cut(s) 53, 119
SchI GAGTC 3 cut(s) 498, 774, 878
ScrFI CCNGG 1 cut(s) 237
SduI GDGCHC 2 cut(s) 460, 754
SfaNI GCATC 2 cut(s) 481, 656
SmlI CTYRAG 1 cut(s) 461
SmoI CTYRAG 1 cut(s) 461
Sse9I AATT 8 cut(s) 98, 140, 193, 537, 544, 600, 794, 916
SsiI CCGC 2 cut(s) 114, 227
SspMI CTAG 2 cut(s) 315, 588
StyD4I CCNGG 1 cut(s) 235
StyI CCWWGG 1 cut(s) 264
TaaI ACNGT 3 cut(s) 251, 347, 469
TaqI TCGA 2 cut(s) 475, 731
TasI AATT 8 cut(s) 98, 140, 193, 537, 544, 600, 794, 916
TfiI GAWTC 2 cut(s) 369, 620
Tru1I TTAA 6 cut(s) 180, 276, 492, 536, 627, 903
Tru9I TTAA 6 cut(s) 180, 276, 492, 536, 627, 903
TscAI CASTG 2 cut(s) 163, 754
TseI GCWGC 1 cut(s) 224
TspDTI ATGAA 3 cut(s) 282, 293, 612
TspGWI ACGGA 1 cut(s) 437
TspRI CASTG 2 cut(s) 163, 754
Van91I CCANNNNNTGG 1 cut(s) 661
XapI RAATTY 3 cut(s) 98, 140, 544
XceI RCATGY 2 cut(s) 634, 728
XspI CTAG 2 cut(s) 315, 588
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.