Rw0G014940

S-adenosylmethionine-dependent methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00669
OG0000151
Physical Location & Seq
Forward (+)
36970 .. 66489
29520 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G014940.1

Sequence Viewer

Length: 2070 bp
ATGGCTTCACAGGAAATCAGAAAAGTCTCTGAAGCATATCCAATGAATGGTGGAGATGGCCCCGATAGCTATGCCAAGAACTCTACTTATCAGAGAGAAGCTATGGAGCCTGTCAAAGAACTTGTAACCAAAGCAATTGCAGAAAAGCTTGACATAGACCTTTTGTTACCTTCCAACTCCTTTCACATTGCGGATCTTGGTTGCTCTGTTGGTCCTAATACATTTTCTTCAGTTGAAAACATACTTGAAGCTGTGGAGCTCAAGTTTCAAGGCCAAGGACTCATGAATCCCCAAATCCCCGAATTTCAAGTTTTCTTCAATGATCATACCCCAAATGATTTTAACTTGCTCTTCAAATCCCTCCCTCCCAACAGGCAATACTATGCTGTGGGAGTTCCAGGTTCTTTCTACGGCCGCCTATTCCCTAGTGCTTCAATTCACTTGTTTCACTCTTCTTTTGCTCTTCAATGGCTTTCTGAAGTACCAAAAGATGTAGAGGACAAAAACTGTCCGGCTTGGAATAAAGGACGGATTCATTACCTCAGTTCGACTGATGAAGTAGTAAGGGCTTATAAAGCTCAATATGCTAAGAACATGGAGTCCTTTCTGCATGCTAGGGCACAAGAACTTGTGTATGGAGGACTAATGGTACTTATCATTCCTGGCTACCCACAGGGTACCCCTCTTTCTCATTCTGTGGCATATTTGACCTTACAACTCATAGAAGCCTGTCTAATTGACATGGTTAAAAAGGGAGTAATTAGCGAAGAGAAACTAGATTCATTCAACATACCAACGTATTCCATGTGCCCCCAAGAACTGGAGACAGTTGTAGAACAAAATGGATCTTTTAGCATAGAGACATTGGAAACATTACCTCGTGTTTTAGCTGATGATGCTGCCTTAAATGCAAAACAATTTGCAGCTCATGGGAGAGCCGCTTTGGAGGGACTCATCAAACAGCAATTTGGAAAAGAAATCACAAATGAGCTCTTCGACTTGTATGGCAAGAAACTCGAGGAAGAACTCTCCATGTTTAAGCCAAGGAAGACAACTAGCTTTCTTGTAGTGCTTAAGCCAATGGAGTCTGTTAAAGAACTTGTTACCAAAGGAATTGCAGAACAGCTTGACATAGACCTTTTGTTACCTTCCAACTCCTTTCACATTGCGGATCTTGGTTGCTCTGTTGGTCCTAATACATTTTCTTCAGTTGAAAACATACTTGAAGCTGTACAGCTCAAGTTTCAAAGCCAAGGACTCATGAATCACCAAATCCCTGAATTTCAAGTTTTCTTCAATGACCATACCCCAAATGATTTTAACTTGCTCTTCAAATCCCTCCCTTCCAACAGGCAATACTATGCTGCGGGAGTTCCAGGTTCTTTTTACGGTCGCCTATTCCCTAGTGCTTCCATTCACTTGTTTCACTCTTCTTTTGCTCTTCAATGGCTTTCTAAAGTACCAAAAGATGTAGAGGACAAAAACAGTCCGGCTTGGAATAAAGGCCGAATTCATTACCTGGGTTCGACTGATGAAGTAGTAAGGGCATATAAAGCTCAATATTCTGAGAATATGAATTCTTTCCTGCATGCTAGGGCAGAAGAACTTGTATATGGAGGACTACTGGTCCTTATCATTCCTGGCTACCCACAGGGTACCCCTCTTTCTCCTACTGTGGCGTATTTGACCTTACAAGTCATAGAAGCCTGTCTCATCGACATGGTCAGAAAGGGAGTAATTAGTGAAGAGAAACTAGATTCATTCAACATACCAATGTATTCCATCTGCCCCCAAGAACTCGAAGCAGTTGTCGAACAAAATGGATCTTTTAGCATAGAGACATTGGAAACAATACCTCATGTTTTAGCTGATGATGCTGTCTTAAATGCAAAACAACTTGCAGCTCATGGAAGAGCCGTCTTGGAGGGACTCATCAAACAGCAATTTGGAAAAGAAATCACAGATGAGCTCTTCGACTTGTATGGCAAGAAAATGGAGAAAGAACTCTCCATTTTTAAGCAAAGGAAGAGAACTAACTTTCTTGTCGTCCTTAAGCGCAAGGCAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_7

Protein Analysis

689

Amino Acids

77.15

Weight (kDa)

5.56

Isoelectric Point (pI)

42.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_7 PF03492 50 - 359 3e-104 SAM dependent carboxyl methyltransferase
Methyltransf_7 PF03492 376 - 686 7.9e-106 SAM dependent carboxyl methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000151)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G37970 AT5G37990 AT5G38100 AT5G38100 AT5G38100 AT5G38100 AT5G38780 AT5G38780
fragaria_vesca FvH4_4g07940 FvH4_4g07950 FvH4_5g16970 FvH4_7g18490
malus_domestica MD02G1312100.v1.1 MD02G1312500.v1.1 MD05G1007900.v1.1 MD06G1223300.v1.1 MD06G1223500.v1.1 MD06G1223600.v1.1 MD06G1223700.v1.1 MD06G1223800.v1.1 MD06G1227300.v1.1 MD09G1253900.v1.1 MD09G1254000.v1.1 MD09G1254100.v1.1 MD09G1254200.v1.1 MD09G1254300.v1.1 MD10G1005200.v1.1 MD10G1005900.v1.1 MD14G1232400.v1.1 MD14G1232700.v1.1 MD14G1232800.v1.1 MD14G1232900.v1.1 MD14G1233000.v1.1 MD15G1255300.v1.1
prunus_persica Prupe.5G228400_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228600_v2.0.a1 Prupe.5G228700_v2.0.a1 Prupe.5G228800_v2.0.a1 Prupe.5G228900_v2.0.a1 Prupe.5G229000_v2.0.a1 Prupe.8G008300_v2.0.a1
pyrus_communis pycom02g26200 pycom02g26220 pycom05g00410 pycom06g19910 pycom06g19920 pycom06g19930 pycom06g19940 pycom06g20380 pycom09g16970 pycom09g16990 pycom09g17000 pycom10g00420 pycom14g19370 pycom14g19380 pycom14g19420 pycom14g19430 pycom15g22380 pycom15g22390
rosa_chinensis RchiOBHm_Chr1g0327241 RchiOBHm_Chr1g0327261 RchiOBHm_Chr2g0128631 RchiOBHm_Chr2g0137031 RchiOBHm_Chr3g0486031 RchiOBHm_Chr3g0486051 RchiOBHm_Chr3g0486091 RchiOBHm_Chr4g0400921 RchiOBHm_Chr4g0400971 RchiOBHm_Chr4g0400991 RchiOBHm_Chr7g0178281 RchiOBHm_Chr7g0178301 RchiOBHm_Chr7g0178321 RchiOBHm_Chr7g0178951 RchiOBHm_Chr7g0178961 RchiOBHm_Chr7g0178971 RchiOBHm_Chr7g0178991 RchiOBHm_Chr7g0179001 RchiOBHm_Chr7g0179021 RchiOBHm_Chr7g0179031 RchiOBHm_Chr7g0179041 RchiOBHm_Chr7g0179051 RchiOBHm_Chr7g0187641 RchiOBHm_Chr7g0201881 RchiOBHm_Chr7g0201901
rosa_laevigata RLG00000005390 RLG00000005391 RLG00000005392 RLG00000005394 RLG00000005456 RLG00000009163 RLG00000009164 RLG00000019598 RLG00000023105 RLG00000030028
rosa_multiflora Rmu_co8337425.1_g000001 Rmu_sc0000795.1_g000125 Rmu_sc0000837.1_g000085 Rmu_sc0000888.1_g000008 Rmu_sc0000888.1_g000010 Rmu_sc0000888.1_g000011 Rmu_sc0000888.1_g000013 Rmu_sc0001021.1_g000003 Rmu_sc0001021.1_g000004 Rmu_sc0001021.1_g000006 Rmu_sc0001374.1_g000046 Rmu_sc0002026.1_g000007 Rmu_sc0002026.1_g000019 Rmu_sc0003465.1_g000046 Rmu_sc0004483.1_g000006 Rmu_sc0006229.1_g000002 Rmu_sc0006736.1_g000019 Rmu_sc0006736.1_g000027 Rmu_sc0007073.1_g000003 Rmu_sc0036373.1_g000001 Rmu_ssc0000009.1_g000007
rosa_roxburghii Rroxscaffold_2G00107760 Rroxscaffold_2G00115440 Rroxscaffold_2G00115920 Rroxscaffold_3G00255030 Rroxscaffold_3G00267200 Rroxscaffold_3G00274440 Rroxscaffold_3G00274450 Rroxscaffold_3G00274480 Rroxscaffold_4G00322940 Rroxscaffold_4G00322950 Rroxscaffold_4G00322980 Rroxscaffold_4G00323000 Rroxscaffold_4G00323020 Rroxscaffold_5G00345860 Rroxscaffold_5G00345890 Rroxscaffold_5G00345920 Rroxscaffold_6G00396060 Rroxscaffold_6G00396070
rosa_rugosa Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064800 Rorug01G0297000 Rorug02G0279500 Rorug02G0337300 Rorug03G0223300 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223500 Rorug03G0223600 Rorug04G0027400 Rorug04G0027500 Rorug04G0027600 Rorug06G0420600 Rorug06G0420600 Rorug06G0483400 Rorug07G0066400 Rorug07G0066600
rosa_samantha Rh1AG081900 Rh1AG082300 Rh1AG082400 Rh1AG305600 Rh2BG340800 Rh2BG393000 Rh3BG308300 Rh4CG113300 Rh4CG113700 Rh7CG020600 Rh7CG020700 Rh7CG020800 Rh7CG021000 Rh7CG088900 Rh7CG204900
rosa_wichuraiana Rw0G002670 Rw0G014940 Rw0G021450 Rw1G006470 Rw1G006490 Rw2G026880 Rw2G027140 Rw2G031610 Rw3G024210 Rw3G024220 Rw7G001620 Rw7G001630 Rw7G001640 Rw7G001650 Rw7G016930 Rw7G016950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 573
Acc65I GGTACC 2 cut(s) 677, 1655
AccB1I GGYRCC 2 cut(s) 677, 1655
AccB7I CCANNNNNTGG 2 cut(s) 47, 820
AciI CCGC 5 cut(s) 191, 415, 939, 1169, 1367
AclWI GGATC 4 cut(s) 201, 853, 1179, 1831
AcoI YGGCCR 1 cut(s) 412
AcsI RAATTY 4 cut(s) 302, 1280, 1509, 1576
AcuI CTGAAG 4 cut(s) 51, 213, 498, 1191
AfaI GTAC 6 cut(s) 483, 651, 679, 1233, 1461, 1657
AfiI CCNNNNNNNGG 2 cut(s) 47, 820
AflII CTTAAG 2 cut(s) 1073, 2051
AhdI GACNNNNNGTC 1 cut(s) 1625
AjnI CCWGG 5 cut(s) 397, 661, 1375, 1518, 1639
AloI GAACNNNNNNTCC 2 cut(s) 584, 616
Alw21I GWGCWC 3 cut(s) 261, 993, 1971
Alw26I GTCTC 5 cut(s) 31, 818, 854, 1715, 1832
AlwI GGATC 4 cut(s) 201, 853, 1179, 1831
Ama87I CYCGRG 1 cut(s) 1016
AoxI GGCC 4 cut(s) 58, 271, 412, 1504
ApeKI GCWGC 4 cut(s) 899, 923, 1364, 1901
ApoI RAATTY 4 cut(s) 302, 1280, 1509, 1576
ArsI GACNNNNNNTTYG 2 cut(s) 1794, 1826
Asp700I GAANNNNTTC 1 cut(s) 1580
Asp718I GGTACC 2 cut(s) 677, 1655
AspLEI GCGC 1 cut(s) 2058
AspS9I GGNCC 4 cut(s) 59, 212, 1190, 1627
AsuHPI GGTGA 1 cut(s) 1259
AvaI CYCGRG 1 cut(s) 1016
AvaII GGWCC 3 cut(s) 212, 1190, 1627
BaeGI GKGCMC 2 cut(s) 622, 812
BanI GGYRCC 2 cut(s) 677, 1655
BanII GRGCYC 3 cut(s) 261, 993, 1971
BauI CACGAG 1 cut(s) 879
BbsI GAAGAC 1 cut(s) 1055
Bbv12I GWGCWC 3 cut(s) 261, 993, 1971
BbvI GCAGC 4 cut(s) 886, 935, 1351, 1913
BccI CCATC 2 cut(s) 50, 1790
BceAI ACGGC 2 cut(s) 427, 1901
BcgI CGANNNNNNTGC 4 cut(s) 53, 87, 997, 1031
BciT130I CCWGG 5 cut(s) 399, 663, 1377, 1520, 1641
BclI TGATCA 1 cut(s) 322
BcoDI GTCTC 5 cut(s) 31, 818, 854, 1715, 1832
BfaI CTAG 7 cut(s) 426, 615, 776, 1056, 1404, 1593, 1754
BfrI CTTAAG 2 cut(s) 1073, 2051
BisI GCNGC 6 cut(s) 415, 900, 924, 939, 1365, 1902
BlsI GCNGC 6 cut(s) 416, 901, 925, 940, 1366, 1903
Bme1390I CCNGG 5 cut(s) 399, 663, 1377, 1520, 1641
Bme18I GGWCC 3 cut(s) 212, 1190, 1627
BmeRI GACNNNNNGTC 1 cut(s) 1625
BmeT110I CYCGRG 1 cut(s) 1016
BmgT120I GGNCC 4 cut(s) 59, 212, 1190, 1627
BmiI GGNNCC 4 cut(s) 61, 108, 679, 1657
BmrFI CCNGG 5 cut(s) 399, 663, 1377, 1520, 1641
BmsI GCATC 2 cut(s) 886, 1864
BpiI GAAGAC 1 cut(s) 1055
BpmI CTGGAG 1 cut(s) 842
BpuEI CTTGAG 2 cut(s) 245, 1223
BsaJI CCNNGG 4 cut(s) 274, 1043, 1252, 1519
BsaXI ACNNNNNCTCC 2 cut(s) 248, 278
Bsc4I CCNNNNNNNGG 2 cut(s) 47, 820
Bse1I ACTGG 2 cut(s) 825, 1629
Bse3DI GCAATG 2 cut(s) 186, 1164
BseBI CCWGG 5 cut(s) 399, 663, 1377, 1520, 1641
BseDI CCNNGG 4 cut(s) 274, 1043, 1252, 1519
BseLI CCNNNNNNNGG 2 cut(s) 47, 820
BseMI GCAATG 2 cut(s) 186, 1164
BseMII CTCAG 2 cut(s) 556, 1557
BseNI ACTGG 2 cut(s) 825, 1629
BseSI GKGCMC 2 cut(s) 622, 812
BseX3I CGGCCG 1 cut(s) 412
BseXI GCAGC 4 cut(s) 886, 935, 1351, 1913
Bsh1285I CGRYCG 2 cut(s) 415, 1393
BshFI GGCC 4 cut(s) 60, 273, 414, 1506
BshNI GGYRCC 2 cut(s) 677, 1655
BsiEI CGRYCG 2 cut(s) 415, 1393
BsiHKAI GWGCWC 3 cut(s) 261, 993, 1971
BsiHKCI CYCGRG 1 cut(s) 1016
BsiSI CCGG 2 cut(s) 512, 1490
BslFI GGGAC 2 cut(s) 963, 1941
BslI CCNNNNNNNGG 2 cut(s) 47, 820
BsmAI GTCTC 5 cut(s) 31, 818, 854, 1715, 1832
BsmFI GGGAC 2 cut(s) 963, 1941
BsnI GGCC 4 cut(s) 60, 273, 414, 1506
BsoBI CYCGRG 1 cut(s) 1016
Bsp1286I GDGCHC 5 cut(s) 261, 622, 812, 993, 1971
Bsp1407I TGTACA 1 cut(s) 1231
Bsp143I GATC 5 cut(s) 193, 322, 845, 1171, 1823
BspACI CCGC 5 cut(s) 191, 415, 939, 1169, 1367
BspANI GGCC 4 cut(s) 60, 273, 414, 1506
BspCNI CTCAG 2 cut(s) 555, 1558
BspHI TCATGA 2 cut(s) 282, 1260
BspLI GGNNCC 4 cut(s) 61, 108, 679, 1657
BspPI GGATC 4 cut(s) 201, 853, 1179, 1831
BspQI GCTCTTC 7 cut(s) 356, 468, 998, 1334, 1446, 1906, 1976
BspT107I GGYRCC 2 cut(s) 677, 1655
BspTI CTTAAG 2 cut(s) 1073, 2051
BsrDI GCAATG 2 cut(s) 186, 1164
BsrGI TGTACA 1 cut(s) 1231
BsrI ACTGG 2 cut(s) 825, 1629
BssECI CCNNGG 4 cut(s) 274, 1043, 1252, 1519
BssMI GATC 5 cut(s) 193, 322, 845, 1171, 1823
BssSI CACGAG 1 cut(s) 879
BssT1I CCWWGG 3 cut(s) 274, 1043, 1252
Bst2BI CACGAG 1 cut(s) 879
Bst2UI CCWGG 5 cut(s) 399, 663, 1377, 1520, 1641
Bst4CI ACNGT 5 cut(s) 509, 829, 1391, 1487, 1675
BstAFI CTTAAG 2 cut(s) 1073, 2051
BstAUI TGTACA 1 cut(s) 1231
BstC8I GCNNGC 2 cut(s) 612, 1590
BstDEI CTNAG 3 cut(s) 542, 588, 1566
BstHHI GCGC 1 cut(s) 2058
BstKTI GATC 5 cut(s) 196, 325, 848, 1174, 1826
BstMAI GTCTC 5 cut(s) 31, 818, 854, 1715, 1832
BstMBI GATC 5 cut(s) 193, 322, 845, 1171, 1823
BstMCI CGRYCG 2 cut(s) 415, 1393
BstMWI GCNNNNNNNGC 7 cut(s) 66, 575, 584, 896, 908, 1553, 1874
BstNI CCWGG 5 cut(s) 399, 663, 1377, 1520, 1641
BstNSI RCATGY 2 cut(s) 614, 1592
BstSCI CCNGG 5 cut(s) 397, 661, 1375, 1518, 1639
BstSLI GKGCMC 2 cut(s) 622, 812
BstV1I GCAGC 4 cut(s) 886, 935, 1351, 1913
BstV2I GAAGAC 1 cut(s) 1055
BstX2I RGATCY 4 cut(s) 193, 845, 1171, 1823
BstYI RGATCY 4 cut(s) 193, 845, 1171, 1823
BstZI CGGCCG 1 cut(s) 412
BsuRI GGCC 4 cut(s) 60, 273, 414, 1506
Cac8I GCNNGC 2 cut(s) 612, 1590
CciI TCATGA 2 cut(s) 282, 1260
CfoI GCGC 1 cut(s) 2058
Cfr13I GGNCC 4 cut(s) 59, 212, 1190, 1627
Csp6I GTAC 6 cut(s) 482, 650, 678, 1232, 1460, 1656
CviQI GTAC 6 cut(s) 482, 650, 678, 1232, 1460, 1656
DdeI CTNAG 3 cut(s) 542, 588, 1566
DpnI GATC 5 cut(s) 195, 324, 847, 1173, 1825
DpnII GATC 5 cut(s) 193, 322, 845, 1171, 1823
DriI GACNNNNNGTC 1 cut(s) 1625
EaeI YGGCCR 1 cut(s) 412
EagI CGGCCG 1 cut(s) 412
Eam1105I GACNNNNNGTC 1 cut(s) 1625
Ecl136II GAGCTC 3 cut(s) 259, 991, 1969
EclXI CGGCCG 1 cut(s) 412
Eco130I CCWWGG 3 cut(s) 274, 1043, 1252
Eco24I GRGCYC 3 cut(s) 261, 993, 1971
Eco47I GGWCC 3 cut(s) 212, 1190, 1627
Eco52I CGGCCG 1 cut(s) 412
Eco53kI GAGCTC 3 cut(s) 259, 991, 1969
Eco57I CTGAAG 4 cut(s) 51, 213, 498, 1191
Eco88I CYCGRG 1 cut(s) 1016
EcoICRI GAGCTC 3 cut(s) 259, 991, 1969
EcoRI GAATTC 2 cut(s) 1509, 1576
EcoRII CCWGG 5 cut(s) 397, 661, 1375, 1518, 1639
EcoT14I CCWWGG 3 cut(s) 274, 1043, 1252
EcoT38I GRGCYC 3 cut(s) 261, 993, 1971
ErhI CCWWGG 3 cut(s) 274, 1043, 1252
FaqI GGGAC 2 cut(s) 963, 1941
FauI CCCGC 1 cut(s) 1360
FbaI TGATCA 1 cut(s) 322
Fnu4HI GCNGC 6 cut(s) 415, 900, 924, 939, 1365, 1902
FriOI GRGCYC 3 cut(s) 261, 993, 1971
Fsp4HI GCNGC 6 cut(s) 415, 900, 924, 939, 1365, 1902
FspBI CTAG 7 cut(s) 426, 615, 776, 1056, 1404, 1593, 1754
GlaI GCGC 1 cut(s) 2057
GluI GCNGC 6 cut(s) 415, 900, 924, 939, 1365, 1902
GsuI CTGGAG 1 cut(s) 842
HaeIII GGCC 4 cut(s) 60, 273, 414, 1506
HapII CCGG 2 cut(s) 512, 1490
HhaI GCGC 1 cut(s) 2058
Hin6I GCGC 1 cut(s) 2056
HinP1I GCGC 1 cut(s) 2056
HindIII AAGCTT 1 cut(s) 146
HpaII CCGG 2 cut(s) 512, 1490
HphI GGTGA 1 cut(s) 1259
Hpy188I TCNGA 6 cut(s) 20, 31, 93, 478, 1567, 1727
Hpy188III TCNNGA 2 cut(s) 283, 1261
HpyAV CCTTC 3 cut(s) 180, 1158, 1353
HpyCH4III ACNGT 5 cut(s) 509, 829, 1391, 1487, 1675
HpyCH4IV ACGT 1 cut(s) 797
HpyCH4V TGCA 8 cut(s) 140, 610, 911, 923, 1118, 1588, 1889, 1901
HpyF10VI GCNNNNNNNGC 7 cut(s) 66, 575, 584, 896, 908, 1553, 1874
HpyF3I CTNAG 3 cut(s) 542, 588, 1566
HpySE526I ACGT 1 cut(s) 797
HspAI GCGC 1 cut(s) 2056
KpnI GGTACC 2 cut(s) 681, 1659
Ksp22I TGATCA 1 cut(s) 322
Kzo9I GATC 5 cut(s) 193, 322, 845, 1171, 1823
LguI GCTCTTC 7 cut(s) 356, 468, 998, 1334, 1446, 1906, 1976
LmnI GCTCC 2 cut(s) 106, 256
Lsp1109I GCAGC 4 cut(s) 886, 935, 1351, 1913
LweI GCATC 2 cut(s) 886, 1864
MaeI CTAG 7 cut(s) 426, 615, 776, 1056, 1404, 1593, 1754
MaeII ACGT 1 cut(s) 797
MaeIII GTNAC 4 cut(s) 124, 165, 1102, 1143
MalI GATC 5 cut(s) 195, 324, 847, 1173, 1825
MboI GATC 5 cut(s) 193, 322, 845, 1171, 1823
MfeI CAATTG 1 cut(s) 135
MflI RGATCY 4 cut(s) 193, 845, 1171, 1823
MhlI GDGCHC 5 cut(s) 261, 622, 812, 993, 1971
MlyI GAGTC 6 cut(s) 273, 608, 945, 1094, 1251, 1923
MmeI TCCRAC 3 cut(s) 198, 1176, 1371
MroXI GAANNNNTTC 1 cut(s) 1580
MslI CAYNNNNRTG 2 cut(s) 1718, 1772
MspCI CTTAAG 2 cut(s) 1073, 2051
MspI CCGG 2 cut(s) 512, 1490
MspR9I CCNGG 5 cut(s) 399, 663, 1377, 1520, 1641
MunI CAATTG 1 cut(s) 135
MvaI CCWGG 5 cut(s) 399, 663, 1377, 1520, 1641
MwoI GCNNNNNNNGC 7 cut(s) 66, 575, 584, 896, 908, 1553, 1874
NdeII GATC 5 cut(s) 193, 322, 845, 1171, 1823
NlaIV GGNNCC 4 cut(s) 61, 108, 679, 1657
NspI RCATGY 2 cut(s) 614, 1592
PaeI GCATGC 2 cut(s) 614, 1592
PaeR7I CTCGAG 1 cut(s) 1016
PagI TCATGA 2 cut(s) 282, 1260
PciSI GCTCTTC 7 cut(s) 356, 468, 998, 1334, 1446, 1906, 1976
PdmI GAANNNNTTC 1 cut(s) 1580
PfeI GAWTC 5 cut(s) 286, 532, 779, 1264, 1757
PflFI GACNNNGTC 1 cut(s) 1721
PflMI CCANNNNNTGG 2 cut(s) 47, 820
PkrI GCNGC 6 cut(s) 416, 901, 925, 940, 1366, 1903
PleI GAGTC 6 cut(s) 273, 607, 945, 1093, 1251, 1923
PpsI GAGTC 6 cut(s) 273, 607, 945, 1093, 1251, 1923
PsiI TTATAA 1 cut(s) 573
Psp124BI GAGCTC 3 cut(s) 261, 993, 1971
Psp6I CCWGG 5 cut(s) 397, 661, 1375, 1518, 1639
PspGI CCWGG 5 cut(s) 397, 661, 1375, 1518, 1639
PspN4I GGNNCC 4 cut(s) 61, 108, 679, 1657
PspPI GGNCC 4 cut(s) 59, 212, 1190, 1627
PspXI VCTCGAGB 1 cut(s) 1016
PsuI RGATCY 4 cut(s) 193, 845, 1171, 1823
PsyI GACNNNGTC 1 cut(s) 1721
RsaI GTAC 6 cut(s) 483, 651, 679, 1233, 1461, 1657
RsaNI GTAC 6 cut(s) 482, 650, 678, 1232, 1460, 1656
RseI CAYNNNNRTG 2 cut(s) 1718, 1772
SacI GAGCTC 3 cut(s) 261, 993, 1971
SapI GCTCTTC 7 cut(s) 356, 468, 998, 1334, 1446, 1906, 1976
SatI GCNGC 6 cut(s) 415, 900, 924, 939, 1365, 1902
Sau3AI GATC 5 cut(s) 193, 322, 845, 1171, 1823
Sau96I GGNCC 4 cut(s) 59, 212, 1190, 1627
SchI GAGTC 6 cut(s) 273, 608, 945, 1094, 1251, 1923
ScrFI CCNGG 5 cut(s) 399, 663, 1377, 1520, 1641
SduI GDGCHC 5 cut(s) 261, 622, 812, 993, 1971
SfaNI GCATC 2 cut(s) 886, 1864
Sfr274I CTCGAG 1 cut(s) 1016
SinI GGWCC 3 cut(s) 212, 1190, 1627
SlaI CTCGAG 1 cut(s) 1016
SmiMI CAYNNNNRTG 2 cut(s) 1718, 1772
SmlI CTYRAG 5 cut(s) 260, 1016, 1073, 1238, 2051
SmoI CTYRAG 5 cut(s) 260, 1016, 1073, 1238, 2051
SphI GCATGC 2 cut(s) 614, 1592
SsiI CCGC 5 cut(s) 191, 415, 939, 1169, 1367
SspI AATATT 1 cut(s) 1562
SspMI CTAG 7 cut(s) 426, 615, 776, 1056, 1404, 1593, 1754
SstI GAGCTC 3 cut(s) 261, 993, 1971
StyD4I CCNGG 5 cut(s) 397, 661, 1375, 1518, 1639
StyI CCWWGG 3 cut(s) 274, 1043, 1252
TaaI ACNGT 5 cut(s) 509, 829, 1391, 1487, 1675
TaiI ACGT 1 cut(s) 800
TaqI TCGA 8 cut(s) 548, 996, 1017, 1526, 1716, 1800, 1812, 1974
TatI WGTACW 1 cut(s) 1231
TauI GCSGC 2 cut(s) 417, 941
TfiI GAWTC 5 cut(s) 286, 532, 779, 1264, 1757
TseI GCWGC 4 cut(s) 899, 923, 1364, 1901
TspGWI ACGGA 1 cut(s) 544
Tth111I GACNNNGTC 1 cut(s) 1721
Van91I CCANNNNNTGG 2 cut(s) 47, 820
Vha464I CTTAAG 2 cut(s) 1073, 2051
VpaK11BI GGWCC 3 cut(s) 212, 1190, 1627
XapI RAATTY 4 cut(s) 302, 1280, 1509, 1576
XceI RCATGY 2 cut(s) 614, 1592
XhoI CTCGAG 1 cut(s) 1016
XmnI GAANNNNTTC 1 cut(s) 1580
XspI CTAG 7 cut(s) 426, 615, 776, 1056, 1404, 1593, 1754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.