RchiOBHm_Chr7g0179051

S-adenosylmethionine-dependent methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
1490408 .. 1490832
425 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ15957

Sequence Viewer

Length: 384 bp
ATGTTGGAATTGAACAAGACATCATTATTCCTTCTGTGTATGCAGGGAGTAGTTAGCGAAGAGAAGGTAGATTCATTTAACATACCTGTGTATTCAATGTCTCCCAAAGAACTAGCAGCTGCTGTAGAAAGAAATGGATGTTTTAGCATAGAGATGGTGGCAGACTTGCTTGTTCCCCCGGTAGATGACACTAGCTCAATGCCACAACTAATTGCCTCTCACATTAGAGCTGGCATGGAGGGGATATTGAAGCAGCAATTTGGAGAGGAACTTATAGATAAGCTCTTCGATTTGTATCGGGAAAAATGTGAAGAGCATATCTCCACCACAGACACAGGGAAGCCAGTTAACTTCCTTGTGGTGCTTAGACGCAAGGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

127

Amino Acids

14.28

Weight (kDa)

4.74

Isoelectric Point (pI)

56.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_7 PF03492 3 - 124 8.4e-26 SAM dependent carboxyl methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000151)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G37970 AT5G37990 AT5G38100 AT5G38100 AT5G38100 AT5G38100 AT5G38780 AT5G38780
fragaria_vesca FvH4_4g07940 FvH4_4g07950 FvH4_5g16970 FvH4_7g18490
malus_domestica MD02G1312100.v1.1 MD02G1312500.v1.1 MD05G1007900.v1.1 MD06G1223300.v1.1 MD06G1223500.v1.1 MD06G1223600.v1.1 MD06G1223700.v1.1 MD06G1223800.v1.1 MD06G1227300.v1.1 MD09G1253900.v1.1 MD09G1254000.v1.1 MD09G1254100.v1.1 MD09G1254200.v1.1 MD09G1254300.v1.1 MD10G1005200.v1.1 MD10G1005900.v1.1 MD14G1232400.v1.1 MD14G1232700.v1.1 MD14G1232800.v1.1 MD14G1232900.v1.1 MD14G1233000.v1.1 MD15G1255300.v1.1
prunus_persica Prupe.5G228400_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228600_v2.0.a1 Prupe.5G228700_v2.0.a1 Prupe.5G228800_v2.0.a1 Prupe.5G228900_v2.0.a1 Prupe.5G229000_v2.0.a1 Prupe.8G008300_v2.0.a1
pyrus_communis pycom02g26200 pycom02g26220 pycom05g00410 pycom06g19910 pycom06g19920 pycom06g19930 pycom06g19940 pycom06g20380 pycom09g16970 pycom09g16990 pycom09g17000 pycom10g00420 pycom14g19370 pycom14g19380 pycom14g19420 pycom14g19430 pycom15g22380 pycom15g22390
rosa_chinensis RchiOBHm_Chr1g0327241 RchiOBHm_Chr1g0327261 RchiOBHm_Chr2g0128631 RchiOBHm_Chr2g0137031 RchiOBHm_Chr3g0486031 RchiOBHm_Chr3g0486051 RchiOBHm_Chr3g0486091 RchiOBHm_Chr4g0400921 RchiOBHm_Chr4g0400971 RchiOBHm_Chr4g0400991 RchiOBHm_Chr7g0178281 RchiOBHm_Chr7g0178301 RchiOBHm_Chr7g0178321 RchiOBHm_Chr7g0178951 RchiOBHm_Chr7g0178961 RchiOBHm_Chr7g0178971 RchiOBHm_Chr7g0178991 RchiOBHm_Chr7g0179001 RchiOBHm_Chr7g0179021 RchiOBHm_Chr7g0179031 RchiOBHm_Chr7g0179041 RchiOBHm_Chr7g0179051 RchiOBHm_Chr7g0187641 RchiOBHm_Chr7g0201881 RchiOBHm_Chr7g0201901
rosa_laevigata RLG00000005390 RLG00000005391 RLG00000005392 RLG00000005394 RLG00000005456 RLG00000009163 RLG00000009164 RLG00000019598 RLG00000023105 RLG00000030028
rosa_multiflora Rmu_co8337425.1_g000001 Rmu_sc0000795.1_g000125 Rmu_sc0000837.1_g000085 Rmu_sc0000888.1_g000008 Rmu_sc0000888.1_g000010 Rmu_sc0000888.1_g000011 Rmu_sc0000888.1_g000013 Rmu_sc0001021.1_g000003 Rmu_sc0001021.1_g000004 Rmu_sc0001021.1_g000006 Rmu_sc0001374.1_g000046 Rmu_sc0002026.1_g000007 Rmu_sc0002026.1_g000019 Rmu_sc0003465.1_g000046 Rmu_sc0004483.1_g000006 Rmu_sc0006229.1_g000002 Rmu_sc0006736.1_g000019 Rmu_sc0006736.1_g000027 Rmu_sc0007073.1_g000003 Rmu_sc0036373.1_g000001 Rmu_ssc0000009.1_g000007
rosa_roxburghii Rroxscaffold_2G00107760 Rroxscaffold_2G00115440 Rroxscaffold_2G00115920 Rroxscaffold_3G00255030 Rroxscaffold_3G00267200 Rroxscaffold_3G00274440 Rroxscaffold_3G00274450 Rroxscaffold_3G00274480 Rroxscaffold_4G00322940 Rroxscaffold_4G00322950 Rroxscaffold_4G00322980 Rroxscaffold_4G00323000 Rroxscaffold_4G00323020 Rroxscaffold_5G00345860 Rroxscaffold_5G00345890 Rroxscaffold_5G00345920 Rroxscaffold_6G00396060 Rroxscaffold_6G00396070
rosa_rugosa Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064800 Rorug01G0297000 Rorug02G0279500 Rorug02G0337300 Rorug03G0223300 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223500 Rorug03G0223600 Rorug04G0027400 Rorug04G0027500 Rorug04G0027600 Rorug06G0420600 Rorug06G0420600 Rorug06G0483400 Rorug07G0066400 Rorug07G0066600
rosa_samantha Rh1AG081900 Rh1AG082300 Rh1AG082400 Rh1AG305600 Rh2BG340800 Rh2BG393000 Rh3BG308300 Rh4CG113300 Rh4CG113700 Rh7CG020600 Rh7CG020700 Rh7CG020800 Rh7CG021000 Rh7CG088900 Rh7CG204900
rosa_wichuraiana Rw0G002670 Rw0G014940 Rw0G021450 Rw1G006470 Rw1G006490 Rw2G026880 Rw2G027140 Rw2G031610 Rw3G024210 Rw3G024220 Rw7G001620 Rw7G001630 Rw7G001640 Rw7G001650 Rw7G016930 Rw7G016950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 3 cut(s) 13, 96, 250
AluBI AGCT 4 cut(s) 119, 195, 230, 283
AluI AGCT 4 cut(s) 119, 195, 230, 283
Alw26I GTCTC 1 cut(s) 105
AlwNI CAGNNNCTG 1 cut(s) 122
ApeKI GCWGC 3 cut(s) 116, 119, 253
AsuC2I CCSGG 1 cut(s) 179
BbvI GCAGC 3 cut(s) 106, 128, 265
BccI CCATC 1 cut(s) 148
BcnI CCSGG 1 cut(s) 179
BcoDI GTCTC 1 cut(s) 105
BfaI CTAG 2 cut(s) 113, 192
BfmI CTRYAG 1 cut(s) 123
BisI GCNGC 3 cut(s) 117, 120, 254
BlsI GCNGC 3 cut(s) 118, 121, 255
Bme1390I CCNGG 1 cut(s) 179
BmrFI CCNGG 1 cut(s) 179
BplI GAGNNNNNCTC 2 cut(s) 305, 337
BpuMI CCSGG 1 cut(s) 179
BsaBI GATNNNNATC 1 cut(s) 294
BsaJI CCNNGG 1 cut(s) 177
Bse1I ACTGG 1 cut(s) 344
Bse8I GATNNNNATC 1 cut(s) 294
BseDI CCNNGG 1 cut(s) 177
BseGI GGATG 1 cut(s) 143
BseJI GATNNNNATC 1 cut(s) 294
BseNI ACTGG 1 cut(s) 344
BseXI GCAGC 3 cut(s) 106, 128, 265
BsiSI CCGG 1 cut(s) 179
BsmAI GTCTC 1 cut(s) 105
BspQI GCTCTTC 2 cut(s) 290, 306
BsrI ACTGG 1 cut(s) 344
BssECI CCNNGG 1 cut(s) 177
Bst6I CTCTTC 3 cut(s) 54, 290, 306
BstC8I GCNNGC 1 cut(s) 232
BstDEI CTNAG 1 cut(s) 365
BstF5I GGATG 1 cut(s) 143
BstMAI GTCTC 1 cut(s) 105
BstSCI CCNGG 1 cut(s) 177
BstSFI CTRYAG 1 cut(s) 123
BstV1I GCAGC 3 cut(s) 106, 128, 265
BtsCI GGATG 1 cut(s) 143
Cac8I GCNNGC 1 cut(s) 232
CaiI CAGNNNCTG 1 cut(s) 122
CseI GACGC 1 cut(s) 378
CviAII CATG 1 cut(s) 235
CviJI RGCY 5 cut(s) 119, 195, 230, 283, 343
CviKI_1 RGCY 5 cut(s) 119, 195, 230, 283, 343
DdeI CTNAG 1 cut(s) 365
Eam1104I CTCTTC 3 cut(s) 54, 290, 306
EarI CTCTTC 3 cut(s) 54, 290, 306
FaeI CATG 1 cut(s) 238
FaiI YATR 6 cut(s) 41, 83, 149, 236, 275, 318
FatI CATG 1 cut(s) 234
Fnu4HI GCNGC 3 cut(s) 117, 120, 254
FokI GGATG 1 cut(s) 150
Fsp4HI GCNGC 3 cut(s) 117, 120, 254
FspBI CTAG 2 cut(s) 113, 192
GluI GCNGC 3 cut(s) 117, 120, 254
HapII CCGG 1 cut(s) 179
HgaI GACGC 1 cut(s) 378
Hin1II CATG 1 cut(s) 238
HincII GTYRAC 1 cut(s) 349
HindII GTYRAC 1 cut(s) 349
HinfI GANTC 1 cut(s) 71
HpaI GTTAAC 1 cut(s) 349
HpaII CCGG 1 cut(s) 179
Hpy166II GTNNAC 1 cut(s) 349
Hpy188III TCNNGA 1 cut(s) 299
Hpy8I GTNNAC 1 cut(s) 349
HpyAV CCTTC 2 cut(s) 41, 58
HpyCH4V TGCA 1 cut(s) 43
HpyF3I CTNAG 1 cut(s) 365
Hsp92II CATG 1 cut(s) 238
KspAI GTTAAC 1 cut(s) 349
LguI GCTCTTC 2 cut(s) 290, 306
LpnPI CCDG 6 cut(s) 29, 99, 192, 216, 321, 357
Lsp1109I GCAGC 3 cut(s) 106, 128, 265
MaeI CTAG 2 cut(s) 113, 192
MboII GAAGA 3 cut(s) 71, 277, 323
MluCI AATT 3 cut(s) 8, 210, 257
MnlI CCTC 3 cut(s) 226, 232, 259
MseI TTAA 2 cut(s) 78, 348
MslI CAYNNNNRTG 2 cut(s) 86, 152
MspA1I CMGCKG 1 cut(s) 119
MspI CCGG 1 cut(s) 179
MspR9I CCNGG 1 cut(s) 179
NciI CCSGG 1 cut(s) 179
NlaIII CATG 1 cut(s) 238
PciSI GCTCTTC 2 cut(s) 290, 306
PfeI GAWTC 1 cut(s) 71
PkrI GCNGC 3 cut(s) 118, 121, 255
PstNI CAGNNNCTG 1 cut(s) 122
PvuII CAGCTG 1 cut(s) 119
RseI CAYNNNNRTG 2 cut(s) 86, 152
SapI GCTCTTC 2 cut(s) 290, 306
SaqAI TTAA 2 cut(s) 78, 348
SatI GCNGC 3 cut(s) 117, 120, 254
ScrFI CCNGG 1 cut(s) 179
SetI ASST 6 cut(s) 69, 88, 121, 197, 232, 285
SfcI CTRYAG 1 cut(s) 123
SmiMI CAYNNNNRTG 2 cut(s) 86, 152
Sse9I AATT 3 cut(s) 8, 210, 257
SspMI CTAG 2 cut(s) 113, 192
StyD4I CCNGG 1 cut(s) 177
TaqI TCGA 1 cut(s) 288
TasI AATT 3 cut(s) 8, 210, 257
TfiI GAWTC 1 cut(s) 71
Tru1I TTAA 2 cut(s) 78, 348
Tru9I TTAA 2 cut(s) 78, 348
TseI GCWGC 3 cut(s) 116, 119, 253
TspDTI ATGAA 1 cut(s) 63
XspI CTAG 2 cut(s) 113, 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.