AT5G38100

S-adenosylmethionine-dependent methyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
15199489 .. 15201197
1709 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G38100.2

Sequence Viewer

Length: 1080 bp
ATGTCAACATCTTCTCACATGTACCCGATGAGCAGCGGTCACGATCAACACAGTTACATCCATAATTCTTCATACCAAAAAGCAGCTATAAGTAGCGCTGTAGAAAAGACAAGACGATGCATCTTTGAAAAGCTCGACCTCCAACTAAGTTCTGATTTTGGTACTTTTAGAATTGCGGATTTTGGATGTTCTATTGGACCGAACACGTTCCATGTTGCTCAAAGTATCATTGATACAGTGAAATCCAAACGCTTGGAAGAAAGTACCGAAAATAGCCTTGTGCCACTAGAGTTCCAAGTTTTCTTCAATGATCAACCCACCAATGACTTCAACACACTCTTTAGAACCCAACCTCTTTCTCCAGAACGCGAATATTTCTCAGTCGGAGTTCCAGGCTCTTTCTATGGTCGGGTGTTACCAAGAAACAGCATCCACATCGGACACACTTCATACACGACTCACTGGCTCTCGAAAGTTCCTGATAACGTATGTGACAAGAAATCTATGGCTTGGAACAAAAATTACATTCAATGTAATAATTTGTTGGAAGAAGTTACCAAGGCTTACAAGGTCCAGTTCATAAAAGACATGGAGATTTTCCTTGATGCTAGAGCGGAGGAACTTGTCCCTGGAGGACTAATGATTGTAATAGGAGAATGTTTGCCTGATGGTGTGTCCTTGTATGAGACATGGCAGGGTTATGTGATGGACACCATCGGTGATTGTCTTATGGATATGGCTAAATCGGGAATAACAAGCGAGGAAAAGATCGATTTATTTAGTTTGCCAGTATATTTTCCTCAATTTAGTGAATTAAAGGGAGAGATTGAGAAAAATGGAAGCTTTACGATTGAGCTGATGGAGACCACAAGTCATCCATTGGAGGGTAAGCCATTAACCAACGACTTCATCACTTCCACGTTTCGAGCTTTTCTCACTACAATCATAGAAAAACATTTTGGAGACGGTGTGGTTGATGAGCTATTCTATCGACTTGCTAAAAAACTCTCCAATCACCCAATTGATTTTGAAATGCGGAAAAAGCAAGTGGTGTATTGTATAGTACTTAAACGAAAATAA

Protein Analysis

359

Amino Acids

40.94

Weight (kDa)

5.7

Isoelectric Point (pI)

37.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_7 PF03492 54 - 248 4e-72 SAM dependent carboxyl methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000151)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G37970 AT5G37990 AT5G38100 AT5G38100 AT5G38100 AT5G38100 AT5G38780 AT5G38780
fragaria_vesca FvH4_4g07940 FvH4_4g07950 FvH4_5g16970 FvH4_7g18490
malus_domestica MD02G1312100.v1.1 MD02G1312500.v1.1 MD05G1007900.v1.1 MD06G1223300.v1.1 MD06G1223500.v1.1 MD06G1223600.v1.1 MD06G1223700.v1.1 MD06G1223800.v1.1 MD06G1227300.v1.1 MD09G1253900.v1.1 MD09G1254000.v1.1 MD09G1254100.v1.1 MD09G1254200.v1.1 MD09G1254300.v1.1 MD10G1005200.v1.1 MD10G1005900.v1.1 MD14G1232400.v1.1 MD14G1232700.v1.1 MD14G1232800.v1.1 MD14G1232900.v1.1 MD14G1233000.v1.1 MD15G1255300.v1.1
prunus_persica Prupe.5G228400_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228500_v2.0.a1 Prupe.5G228600_v2.0.a1 Prupe.5G228700_v2.0.a1 Prupe.5G228800_v2.0.a1 Prupe.5G228900_v2.0.a1 Prupe.5G229000_v2.0.a1 Prupe.8G008300_v2.0.a1
pyrus_communis pycom02g26200 pycom02g26220 pycom05g00410 pycom06g19910 pycom06g19920 pycom06g19930 pycom06g19940 pycom06g20380 pycom09g16970 pycom09g16990 pycom09g17000 pycom10g00420 pycom14g19370 pycom14g19380 pycom14g19420 pycom14g19430 pycom15g22380 pycom15g22390
rosa_chinensis RchiOBHm_Chr1g0327241 RchiOBHm_Chr1g0327261 RchiOBHm_Chr2g0128631 RchiOBHm_Chr2g0137031 RchiOBHm_Chr3g0486031 RchiOBHm_Chr3g0486051 RchiOBHm_Chr3g0486091 RchiOBHm_Chr4g0400921 RchiOBHm_Chr4g0400971 RchiOBHm_Chr4g0400991 RchiOBHm_Chr7g0178281 RchiOBHm_Chr7g0178301 RchiOBHm_Chr7g0178321 RchiOBHm_Chr7g0178951 RchiOBHm_Chr7g0178961 RchiOBHm_Chr7g0178971 RchiOBHm_Chr7g0178991 RchiOBHm_Chr7g0179001 RchiOBHm_Chr7g0179021 RchiOBHm_Chr7g0179031 RchiOBHm_Chr7g0179041 RchiOBHm_Chr7g0179051 RchiOBHm_Chr7g0187641 RchiOBHm_Chr7g0201881 RchiOBHm_Chr7g0201901
rosa_laevigata RLG00000005390 RLG00000005391 RLG00000005392 RLG00000005394 RLG00000005456 RLG00000009163 RLG00000009164 RLG00000019598 RLG00000023105 RLG00000030028
rosa_multiflora Rmu_co8337425.1_g000001 Rmu_sc0000795.1_g000125 Rmu_sc0000837.1_g000085 Rmu_sc0000888.1_g000008 Rmu_sc0000888.1_g000010 Rmu_sc0000888.1_g000011 Rmu_sc0000888.1_g000013 Rmu_sc0001021.1_g000003 Rmu_sc0001021.1_g000004 Rmu_sc0001021.1_g000006 Rmu_sc0001374.1_g000046 Rmu_sc0002026.1_g000007 Rmu_sc0002026.1_g000019 Rmu_sc0003465.1_g000046 Rmu_sc0004483.1_g000006 Rmu_sc0006229.1_g000002 Rmu_sc0006736.1_g000019 Rmu_sc0006736.1_g000027 Rmu_sc0007073.1_g000003 Rmu_sc0036373.1_g000001 Rmu_ssc0000009.1_g000007
rosa_roxburghii Rroxscaffold_2G00107760 Rroxscaffold_2G00115440 Rroxscaffold_2G00115920 Rroxscaffold_3G00255030 Rroxscaffold_3G00267200 Rroxscaffold_3G00274440 Rroxscaffold_3G00274450 Rroxscaffold_3G00274480 Rroxscaffold_4G00322940 Rroxscaffold_4G00322950 Rroxscaffold_4G00322980 Rroxscaffold_4G00323000 Rroxscaffold_4G00323020 Rroxscaffold_5G00345860 Rroxscaffold_5G00345890 Rroxscaffold_5G00345920 Rroxscaffold_6G00396060 Rroxscaffold_6G00396070
rosa_rugosa Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064700 Rorug01G0064800 Rorug01G0297000 Rorug02G0279500 Rorug02G0337300 Rorug03G0223300 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223400 Rorug03G0223500 Rorug03G0223600 Rorug04G0027400 Rorug04G0027500 Rorug04G0027600 Rorug06G0420600 Rorug06G0420600 Rorug06G0483400 Rorug07G0066400 Rorug07G0066600
rosa_samantha Rh1AG081900 Rh1AG082300 Rh1AG082400 Rh1AG305600 Rh2BG340800 Rh2BG393000 Rh3BG308300 Rh4CG113300 Rh4CG113700 Rh7CG020600 Rh7CG020700 Rh7CG020800 Rh7CG021000 Rh7CG088900 Rh7CG204900
rosa_wichuraiana Rw0G002670 Rw0G014940 Rw0G021450 Rw1G006470 Rw1G006490 Rw2G026880 Rw2G027140 Rw2G031610 Rw3G024210 Rw3G024220 Rw7G001620 Rw7G001630 Rw7G001640 Rw7G001650 Rw7G016930 Rw7G016950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 614
AccII CGCG 1 cut(s) 369
AciI CCGC 4 cut(s) 36, 176, 614, 1036
AfaI GTAC 4 cut(s) 23, 163, 265, 1065
AfeI AGCGCT 1 cut(s) 97
AfiI CCNNNNNNNGG 1 cut(s) 884
AflIII ACRYGT 2 cut(s) 18, 204
AgsI TTSAA 5 cut(s) 128, 307, 331, 530, 1031
AhdI GACNNNNNGTC 1 cut(s) 870
AjnI CCWGG 2 cut(s) 391, 628
AjuI GAANNNNNNNTTGG 2 cut(s) 942, 974
AluBI AGCT 6 cut(s) 86, 133, 843, 856, 929, 982
AluI AGCT 6 cut(s) 86, 133, 843, 856, 929, 982
Alw26I GTCTC 3 cut(s) 680, 857, 957
Aor51HI AGCGCT 1 cut(s) 97
ApeKI GCWGC 2 cut(s) 33, 83
Asp700I GAANNNNTTC 1 cut(s) 206
AspLEI GCGC 1 cut(s) 98
AspS9I GGNCC 2 cut(s) 197, 571
AsuHPI GGTGA 2 cut(s) 731, 1007
AvaII GGWCC 2 cut(s) 197, 571
BbvI GCAGC 2 cut(s) 45, 95
BccI CCATC 4 cut(s) 662, 700, 722, 853
BcgI CGANNNNNNTGC 2 cut(s) 418, 452
BciT130I CCWGG 2 cut(s) 393, 630
BclI TGATCA 1 cut(s) 310
BcoDI GTCTC 3 cut(s) 680, 857, 957
BfaI CTAG 2 cut(s) 287, 609
BfmI CTRYAG 1 cut(s) 99
BfoI RGCGCY 1 cut(s) 99
BisI GCNGC 2 cut(s) 34, 84
BlsI GCNGC 2 cut(s) 35, 85
BmcAI AGTACT 1 cut(s) 1065
Bme1390I CCNGG 2 cut(s) 393, 630
Bme18I GGWCC 2 cut(s) 197, 571
BmeRI GACNNNNNGTC 1 cut(s) 870
BmgT120I GGNCC 2 cut(s) 197, 571
BmrFI CCNGG 2 cut(s) 393, 630
BmsI GCATC 4 cut(s) 107, 129, 438, 595
BplI GAGNNNNNCTC 2 cut(s) 918, 950
BpmI CTGGAG 2 cut(s) 345, 651
Bsa29I ATCGAT 1 cut(s) 771
BsaI GGTCTC 1 cut(s) 857
BsaJI CCNNGG 2 cut(s) 558, 628
BsaXI ACNNNNNCTCC 2 cut(s) 954, 984
Bsc4I CCNNNNNNNGG 1 cut(s) 884
Bse1I ACTGG 3 cut(s) 467, 574, 788
BseBI CCWGG 2 cut(s) 393, 630
BseCI ATCGAT 1 cut(s) 771
BseDI CCNNGG 2 cut(s) 558, 628
BseGI GGATG 4 cut(s) 57, 191, 429, 874
BseLI CCNNNNNNNGG 1 cut(s) 884
BseMII CTCAG 1 cut(s) 393
BseNI ACTGG 3 cut(s) 467, 574, 788
BseXI GCAGC 2 cut(s) 45, 95
Bsh1236I CGCG 1 cut(s) 369
BshVI ATCGAT 1 cut(s) 771
BslFI GGGAC 1 cut(s) 611
BslI CCNNNNNNNGG 1 cut(s) 884
BsmAI GTCTC 3 cut(s) 680, 857, 957
BsmBI CGTCTC 1 cut(s) 957
BsmFI GGGAC 1 cut(s) 611
Bso31I GGTCTC 1 cut(s) 857
Bsp143I GATC 3 cut(s) 43, 310, 768
BspACI CCGC 4 cut(s) 36, 176, 614, 1036
BspCNI CTCAG 1 cut(s) 392
BspDI ATCGAT 1 cut(s) 771
BspFNI CGCG 1 cut(s) 369
BspTNI GGTCTC 1 cut(s) 857
BsrBI CCGCTC 1 cut(s) 614
BsrI ACTGG 3 cut(s) 467, 574, 788
BssECI CCNNGG 2 cut(s) 558, 628
BssMI GATC 3 cut(s) 43, 310, 768
BssT1I CCWWGG 1 cut(s) 558
Bst2UI CCWGG 2 cut(s) 393, 630
Bst4CI ACNGT 3 cut(s) 53, 238, 968
BstDEI CTNAG 2 cut(s) 146, 379
BstF5I GGATG 4 cut(s) 57, 191, 429, 874
BstFNI CGCG 1 cut(s) 369
BstH2I RGCGCY 1 cut(s) 99
BstHHI GCGC 1 cut(s) 98
BstKTI GATC 3 cut(s) 46, 313, 771
BstMAI GTCTC 3 cut(s) 680, 857, 957
BstMBI GATC 3 cut(s) 43, 310, 768
BstMWI GCNNNNNNNGC 1 cut(s) 1042
BstNI CCWGG 2 cut(s) 393, 630
BstNSI RCATGY 1 cut(s) 22
BstSCI CCNGG 2 cut(s) 391, 628
BstSFI CTRYAG 1 cut(s) 99
BstUI CGCG 1 cut(s) 369
BstV1I GCAGC 2 cut(s) 45, 95
BstXI CCANNNNNNTGG 1 cut(s) 253
Bsu15I ATCGAT 1 cut(s) 771
BsuTUI ATCGAT 1 cut(s) 771
BtsCI GGATG 4 cut(s) 57, 191, 429, 874
BtsIMutI CAGTG 2 cut(s) 243, 460
CfoI GCGC 1 cut(s) 98
Cfr13I GGNCC 2 cut(s) 197, 571
ClaI ATCGAT 1 cut(s) 771
Csp6I GTAC 4 cut(s) 22, 162, 264, 1064
CviAII CATG 4 cut(s) 19, 212, 589, 690
CviQI GTAC 4 cut(s) 22, 162, 264, 1064
DdeI CTNAG 2 cut(s) 146, 379
DpnI GATC 3 cut(s) 45, 312, 770
DpnII GATC 3 cut(s) 43, 310, 768
DriI GACNNNNNGTC 1 cut(s) 870
Eam1105I GACNNNNNGTC 1 cut(s) 870
Eco130I CCWWGG 1 cut(s) 558
Eco31I GGTCTC 1 cut(s) 857
Eco47I GGWCC 2 cut(s) 197, 571
Eco47III AGCGCT 1 cut(s) 97
EcoRII CCWGG 2 cut(s) 391, 628
EcoT14I CCWWGG 1 cut(s) 558
EcoT22I ATGCAT 1 cut(s) 122
ErhI CCWWGG 1 cut(s) 558
Esp3I CGTCTC 1 cut(s) 957
FaeI CATG 4 cut(s) 22, 215, 592, 693
FaqI GGGAC 1 cut(s) 611
FatI CATG 4 cut(s) 18, 211, 588, 689
FbaI TGATCA 1 cut(s) 310
Fnu4HI GCNGC 2 cut(s) 34, 84
FokI GGATG 4 cut(s) 44, 198, 416, 861
Fsp4HI GCNGC 2 cut(s) 34, 84
FspBI CTAG 2 cut(s) 287, 609
GlaI GCGC 1 cut(s) 97
GluI GCNGC 2 cut(s) 34, 84
GsuI CTGGAG 2 cut(s) 345, 651
HaeII RGCGCY 1 cut(s) 99
HhaI GCGC 1 cut(s) 98
Hin1II CATG 4 cut(s) 22, 215, 592, 693
Hin6I GCGC 1 cut(s) 96
HinP1I GCGC 1 cut(s) 96
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HindIII AAGCTT 1 cut(s) 841
HinfI GANTC 1 cut(s) 457
HphI GGTGA 2 cut(s) 731, 1007
Hpy166II GTNNAC 1 cut(s) 6
Hpy188I TCNGA 3 cut(s) 154, 386, 440
Hpy188III TCNNGA 5 cut(s) 41, 362, 469, 479, 747
Hpy8I GTNNAC 1 cut(s) 6
HpyCH4III ACNGT 3 cut(s) 53, 238, 968
HpyCH4IV ACGT 3 cut(s) 206, 486, 920
HpyCH4V TGCA 1 cut(s) 120
HpyF10VI GCNNNNNNNGC 1 cut(s) 1042
HpyF3I CTNAG 2 cut(s) 146, 379
HpySE526I ACGT 3 cut(s) 206, 486, 920
Hsp92II CATG 4 cut(s) 22, 215, 592, 693
HspAI GCGC 1 cut(s) 96
Ksp22I TGATCA 1 cut(s) 310
Kzo9I GATC 3 cut(s) 43, 310, 768
Lsp1109I GCAGC 2 cut(s) 45, 95
LweI GCATC 4 cut(s) 107, 129, 438, 595
MaeI CTAG 2 cut(s) 287, 609
MaeII ACGT 3 cut(s) 206, 486, 920
MaeIII GTNAC 5 cut(s) 38, 53, 414, 491, 553
MalI GATC 3 cut(s) 45, 312, 770
MbiI CCGCTC 1 cut(s) 614
MboI GATC 3 cut(s) 43, 310, 768
MboII GAAGA 5 cut(s) 3, 60, 269, 295, 560
MfeI CAATTG 1 cut(s) 1020
MluCI AATT 7 cut(s) 64, 171, 520, 538, 803, 812, 1020
MlyI GAGTC 1 cut(s) 451
MmeI TCCRAC 3 cut(s) 166, 364, 525
MnlI CCTC 7 cut(s) 149, 363, 610, 626, 754, 810, 877
Mph1103I ATGCAT 1 cut(s) 122
MroXI GAANNNNTTC 1 cut(s) 206
MseI TTAA 3 cut(s) 815, 896, 1068
MspA1I CMGCKG 1 cut(s) 36
MspR9I CCNGG 2 cut(s) 393, 630
MunI CAATTG 1 cut(s) 1020
MvaI CCWGG 2 cut(s) 393, 630
MvnI CGCG 1 cut(s) 369
MwoI GCNNNNNNNGC 1 cut(s) 1042
NdeII GATC 3 cut(s) 43, 310, 768
NlaIII CATG 4 cut(s) 22, 215, 592, 693
NmuCI GTSAC 2 cut(s) 38, 491
NsiI ATGCAT 1 cut(s) 122
NspI RCATGY 1 cut(s) 22
PciI ACATGT 1 cut(s) 18
PdmI GAANNNNTTC 1 cut(s) 206
PkrI GCNGC 2 cut(s) 35, 85
PleI GAGTC 1 cut(s) 451
PpsI GAGTC 1 cut(s) 451
PscI ACATGT 1 cut(s) 18
Psp6I CCWGG 2 cut(s) 391, 628
PspGI CCWGG 2 cut(s) 391, 628
PspPI GGNCC 2 cut(s) 197, 571
PsrI GAACNNNNNNTAC 2 cut(s) 506, 538
RsaI GTAC 4 cut(s) 23, 163, 265, 1065
RsaNI GTAC 4 cut(s) 22, 162, 264, 1064
SaqAI TTAA 3 cut(s) 815, 896, 1068
SatI GCNGC 2 cut(s) 34, 84
Sau3AI GATC 3 cut(s) 43, 310, 768
Sau96I GGNCC 2 cut(s) 197, 571
ScaI AGTACT 1 cut(s) 1065
SchI GAGTC 1 cut(s) 451
ScrFI CCNGG 2 cut(s) 393, 630
SfaNI GCATC 4 cut(s) 107, 129, 438, 595
SfcI CTRYAG 1 cut(s) 99
SinI GGWCC 2 cut(s) 197, 571
Sse9I AATT 7 cut(s) 64, 171, 520, 538, 803, 812, 1020
SsiI CCGC 4 cut(s) 36, 176, 614, 1036
SspI AATATT 1 cut(s) 374
SspMI CTAG 2 cut(s) 287, 609
StyD4I CCNGG 2 cut(s) 391, 628
StyI CCWWGG 1 cut(s) 558
TaaI ACNGT 3 cut(s) 53, 238, 968
TaiI ACGT 3 cut(s) 209, 489, 923
TaqI TCGA 5 cut(s) 135, 470, 771, 925, 991
TaqII GACCGA 1 cut(s) 214
TasI AATT 7 cut(s) 64, 171, 520, 538, 803, 812, 1020
TatI WGTACW 1 cut(s) 1063
Tru1I TTAA 3 cut(s) 815, 896, 1068
Tru9I TTAA 3 cut(s) 815, 896, 1068
TscAI CASTG 2 cut(s) 243, 467
TseFI GTSAC 2 cut(s) 38, 491
TseI GCWGC 2 cut(s) 33, 83
Tsp45I GTSAC 2 cut(s) 38, 491
TspDTI ATGAA 4 cut(s) 60, 438, 568, 898
TspRI CASTG 2 cut(s) 243, 467
VpaK11BI GGWCC 2 cut(s) 197, 571
XceI RCATGY 1 cut(s) 22
XmnI GAANNNNTTC 1 cut(s) 206
XspI CTAG 2 cut(s) 287, 609
ZrmI AGTACT 1 cut(s) 1065
Zsp2I ATGCAT 1 cut(s) 122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.