FvH4_2g24261

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000216
Physical Location & Seq
Reverse (-)
19826085 .. 19827696
1612 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g24261.t1

Sequence Viewer

Length: 1275 bp
ATGAAGGATTGGTCTAGGTTAGGAGCGCCCTCTCATCCGTCTCTCTTAAACCCAATATGCTTGAAGAATATTGATGATCTCCCTGAGAATGTATTGGTTGAAATCCTTTGTCGACTTCCATGCAAGTTTGTTGCACGATGCAAGTGTGTCTGCAAATCTTGGTCGACTCTCATCTCCCTTCCTTACTTCCAAACCCGTCGTGCTCTATATCTCAATTACAATAATTGTGACGACACCGACCAAATTCTCTTGTCCGTCGAAACTACGCGCTTTGGACGTCAAGCAGGAGAACTCTTTATTATTTCAAAGCACACAGATCGTCCAGTGTTAAAATTAATCAAAATCTATCCCAGCAGCGCCATTGTGGAAGCCACGTACAATGACTTGATTTTGTTTTGTGAAGAACGGGGCTTCGCGAAGAAGTACTTCATCTGCAATCCGTACACCAACCAATGGTTTGCTGTTCCTCCTTCTAATTGTGATTCATATAAAACAGATGTGGGATTCATCTGTGATTCTGACTACAGGTGCCGGATTGTACGACTCCTTAATTGGATTAGAGCAGAACAACCTCCCTTCCGATTAAAGGTGGAGGTCTTCTCTTCCGAGACTGGTAAATGGACAGTATCAGTTGTCAATTTCCCGCAAACGTTTAGACTTCATAGTTTCAAGAGAAGTACACCAGCCCTTGCTTACGATGGAATGTTGTATTGGTTAGGCAATGATGGCCTTCTTATTGGGTTGGATCCTTTCAGCAAGCTAGACAATAACCATCATTGTCGTTTTATTTCCAAGCCTCTTCTAGACTTTTCTGAATTTCGCACCGATCGCGAGTGCCTGGGTGTGTGCCGGGGGACTGTGAGGCTGTGCCGGTCGTATAGTCCTACATGTTATCGGTTGAATCTCTGTGTGTGGGAGCTGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGATAGTGAGGTGGATGGAGTTGGAGGCAAGATGATGAAATGGTATTTGAAAGAAAGGGTCGAACTGCACGGAACTAGTTTAGGGCAGCTTCTGGCTTTAGACCCAAATGATGGAGATATAATCTACCTAAAACGTAATACCTGGACAGGTGGTGGGGCGGCAAAAATTGTAAGGTGTAATATACGTACAAGGAAGGTGATTGATATGCCTCAGAAGCTTCCATGTTCTGATTTTCTGATAGAAGCGTTTCCATTTGTGCCCCCATGTTGGCAGTGGCCGACACCAGTTCCTAGTCTAGACAGCCAAACCAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

425

Amino Acids

48.93

Weight (kDa)

6.15

Isoelectric Point (pI)

43.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 24 - 63 2.8e-09 F-box domain
F-box-like PF12937 24 - 61 8e-07 F-box-like
b-prop_At3g26010-like PF24750 120 - 396 2.5e-20 F-box protein At3g26010-like, beta-propeller
FBA_1 PF07734 121 - 240 1.4e-06 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000216)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38860 AT5G38860
fragaria_vesca FvH4_2g24261 FvH4_2g24270 FvH4_3g35490 FvH4_6g03181 FvH4_6g03182 FvH4_6g03221 FvH4_6g03380 FvH4_6g05203 FvH4_6g31981 FvH4_6g32061 FvH4_6g37041 FvH4_6g39371 FvH4_6g45291 FvH4_6g45890 FvH4_6g46240 FvH4_6g46241 FvH4_6g46242 FvH4_6g46260 FvH4_6g46280 FvH4_6g46280 FvH4_6g46280 FvH4_6g46290 FvH4_6g46290 FvH4_6g46380
malus_domestica MD02G1008700.v1.1 MD02G1008900.v1.1 MD04G1180900.v1.1 MD04G1181200.v1.1 MD09G1075900.v1.1 MD09G1201600.v1.1 MD15G1017800.v1.1 MD17G1066600.v1.1
prunus_persica Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G512600_v2.0.a1 Prupe.3G059500_v2.0.a1 Prupe.3G059600_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.6G076400_v2.0.a1
pyrus_communis pycom02g00750 pycom03g20320 pycom09g00330 pycom11g08760 pycom17g04880 pycom17g06710 pycom17g19130
rosa_chinensis RchiOBHm_Chr2g0123691 RchiOBHm_Chr2g0164671 RchiOBHm_Chr2g0164681 RchiOBHm_Chr2g0164721 RchiOBHm_Chr2g0164741 RchiOBHm_Chr6g0275871 RchiOBHm_Chr6g0276071 RchiOBHm_Chr6g0291931 RchiOBHm_Chr6g0292091 RchiOBHm_Chr6g0292271 RchiOBHm_Chr7g0221261
rosa_laevigata RLG00000002165 RLG00000007725 RLG00000012062 RLG00000012543 RLG00000013427 RLG00000021441 RLG00000021477 RLG00000021478 RLG00000021480 RLG00000021481
rosa_multiflora Rmu_co8220318.1_g000001 Rmu_co8427407.1_g000001 Rmu_sc0000946.1_g000006 Rmu_sc0000946.1_g000007 Rmu_sc0000946.1_g000010 Rmu_sc0000946.1_g000012 Rmu_sc0000946.1_g000013 Rmu_sc0002030.1_g000015 Rmu_sc0002870.1_g000002 Rmu_sc0003200.1_g000004 Rmu_sc0004915.1_g000002 Rmu_sc0004991.1_g000006 Rmu_sc0006928.1_g000020 Rmu_sc0007384.1_g000001 Rmu_sc0030722.1_g000001 Rmu_sc0030723.1_g000001 Rmu_ssc0000076.1_g000019 Rmu_ssc0000076.1_g000025 Rmu_ssc0000318.1_g000001
rosa_roxburghii Rroxscaffold_2G00086340 Rroxscaffold_2G00086360 Rroxscaffold_2G00086370 Rroxscaffold_2G00086380 Rroxscaffold_2G00086830 Rroxscaffold_2G00087380 Rroxscaffold_2G00120420 Rroxscaffold_7G00175260 Rroxscaffold_7G00175600 Rroxscaffold_7G00177970 Rroxscaffold_7G00192830
rosa_rugosa Rorug02G0247400 Rorug02G0506200 Rorug02G0508300 Rorug02G0509700 Rorug05G0378800 Rorug06G0096600 Rorug06G0096700 Rorug06G0221800
rosa_samantha Rh2AG577600 Rh2AG577700 Rh2AG577800 Rh2AG578000 Rh2AG578100 Rh2BG589200 Rh2CG559800 Rh2DG594400 Rh2DG594500 Rh2DG597800 Rh2DG599400 Rh2DG599500 Rh2DG599600 Rh6AG338400 Rh6BG211200 Rh6BG212600 Rh6BG342900 Rh6BG345600 Rh6CG214800 Rh6CG349100 Rh6CG350600 Rh6CG350700 Rh6CG352600 Rh7AG340800
rosa_wichuraiana Rw1G028590 Rw2G047980 Rw2G047990 Rw5G043360 Rw6G018180 Rw6G029200 Rw6G029450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 280
AccB1I GGYRCC 1 cut(s) 528
AccB7I CCANNNNNTGG 2 cut(s) 453, 1070
AccI GTMKAC 2 cut(s) 112, 164
AccII CGCG 3 cut(s) 268, 416, 831
AciI CCGC 2 cut(s) 644, 1118
AclI AACGTT 1 cut(s) 650
AclWI GGATC 2 cut(s) 740, 753
AcoI YGGCCR 1 cut(s) 1235
AcsI RAATTY 2 cut(s) 243, 815
AcyI GRCGYC 1 cut(s) 277
AfaI GTAC 6 cut(s) 377, 425, 443, 540, 679, 1147
AfiI CCNNNNNNNGG 4 cut(s) 453, 586, 1070, 1227
AflIII ACRYGT 1 cut(s) 887
AgsI TTSAA 6 cut(s) 64, 101, 306, 670, 901, 1009
AhlI ACTAGT 1 cut(s) 1034
AjnI CCWGG 2 cut(s) 837, 1100
AjuI GAANNNNNNNTTGG 2 cut(s) 694, 726
AluBI AGCT 4 cut(s) 760, 919, 1048, 1177
AluI AGCT 4 cut(s) 760, 919, 1048, 1177
Alw21I GWGCWC 1 cut(s) 205
Alw26I GTCTC 2 cut(s) 45, 602
AlwI GGATC 2 cut(s) 740, 753
AlwNI CAGNNNCTG 1 cut(s) 1051
AoxI GGCC 2 cut(s) 727, 1235
ApeKI GCWGC 2 cut(s) 354, 1045
ApoI RAATTY 2 cut(s) 243, 815
AseI ATTAAT 1 cut(s) 335
Asp700I GAANNNNTTC 2 cut(s) 425, 1206
AspLEI GCGC 3 cut(s) 28, 270, 359
AsuC2I CCSGG 1 cut(s) 851
AsuHPI GGTGA 1 cut(s) 1168
BaeGI GKGCMC 1 cut(s) 1221
BamHI GGATCC 1 cut(s) 745
BanI GGYRCC 1 cut(s) 528
BbsI GAAGAC 1 cut(s) 589
Bbv12I GWGCWC 1 cut(s) 205
BbvI GCAGC 2 cut(s) 366, 1057
BccI CCATC 5 cut(s) 692, 719, 780, 968, 1064
BcgI CGANNNNNNTGC 4 cut(s) 102, 136, 299, 333
BciT130I CCWGG 2 cut(s) 839, 1102
BcnI CCSGG 1 cut(s) 851
BcoDI GTCTC 2 cut(s) 45, 602
BcuI ACTAGT 1 cut(s) 1034
BfaI CTAG 6 cut(s) 15, 761, 803, 1035, 1251, 1256
BfmI CTRYAG 1 cut(s) 523
BfoI RGCGCY 2 cut(s) 29, 360
BisI GCNGC 3 cut(s) 355, 1046, 1119
BlsI GCNGC 3 cut(s) 356, 1047, 1120
BmcAI AGTACT 1 cut(s) 425
Bme1390I CCNGG 3 cut(s) 839, 851, 1102
BmiI GGNNCC 2 cut(s) 530, 747
BmrFI CCNGG 3 cut(s) 839, 851, 1102
BmsI GCATC 1 cut(s) 128
BpiI GAAGAC 1 cut(s) 589
BplI GAGNNNNNCTC 2 cut(s) 584, 616
BpuMI CCSGG 1 cut(s) 851
BsaAI YACGTR 2 cut(s) 375, 1145
BsaHI GRCGYC 1 cut(s) 277
BsaJI CCNNGG 2 cut(s) 838, 850
Bsc4I CCNNNNNNNGG 4 cut(s) 453, 586, 1070, 1227
Bse118I RCCGGY 1 cut(s) 870
Bse1I ACTGG 3 cut(s) 323, 616, 1244
Bse3DI GCAATG 1 cut(s) 727
BseBI CCWGG 2 cut(s) 839, 1102
BseDI CCNNGG 2 cut(s) 838, 850
BseGI GGATG 2 cut(s) 34, 979
BseLI CCNNNNNNNGG 4 cut(s) 453, 586, 1070, 1227
BseMI GCAATG 1 cut(s) 727
BseMII CTCAG 2 cut(s) 75, 1184
BseNI ACTGG 3 cut(s) 323, 616, 1244
BseSI GKGCMC 1 cut(s) 1221
BseXI GCAGC 2 cut(s) 366, 1057
BseYI CCCAGC 1 cut(s) 350
BsgI GTGCAG 1 cut(s) 1010
Bsh1236I CGCG 3 cut(s) 268, 416, 831
Bsh1285I CGRYCG 2 cut(s) 829, 875
BshFI GGCC 2 cut(s) 729, 1237
BshNI GGYRCC 1 cut(s) 528
BsiEI CGRYCG 2 cut(s) 829, 875
BsiHKAI GWGCWC 1 cut(s) 205
BsiSI CCGG 3 cut(s) 532, 850, 871
BslFI GGGAC 1 cut(s) 868
BslI CCNNNNNNNGG 4 cut(s) 453, 586, 1070, 1227
BsmAI GTCTC 2 cut(s) 45, 602
BsmBI CGTCTC 1 cut(s) 45
BsmFI GGGAC 1 cut(s) 868
BsnI GGCC 2 cut(s) 729, 1237
Bsp1286I GDGCHC 2 cut(s) 205, 1221
Bsp143I GATC 4 cut(s) 76, 316, 745, 826
Bsp68I TCGCGA 2 cut(s) 416, 831
BspACI CCGC 2 cut(s) 644, 1118
BspANI GGCC 2 cut(s) 729, 1237
BspCNI CTCAG 2 cut(s) 76, 1183
BspFNI CGCG 3 cut(s) 268, 416, 831
BspLI GGNNCC 2 cut(s) 530, 747
BspPI GGATC 2 cut(s) 740, 753
BspT107I GGYRCC 1 cut(s) 528
BsrDI GCAATG 1 cut(s) 727
BsrFI RCCGGY 1 cut(s) 870
BsrI ACTGG 3 cut(s) 323, 616, 1244
BssAI RCCGGY 1 cut(s) 870
BssECI CCNNGG 2 cut(s) 838, 850
BssMI GATC 4 cut(s) 76, 316, 745, 826
BssNI GRCGYC 1 cut(s) 277
Bst2UI CCWGG 2 cut(s) 839, 1102
Bst4CI ACNGT 2 cut(s) 625, 859
Bst6I CTCTTC 2 cut(s) 607, 804
BstACI GRCGYC 1 cut(s) 277
BstBAI YACGTR 2 cut(s) 375, 1145
BstC8I GCNNGC 1 cut(s) 758
BstDEI CTNAG 2 cut(s) 84, 1170
BstF5I GGATG 2 cut(s) 34, 979
BstFNI CGCG 3 cut(s) 268, 416, 831
BstH2I RGCGCY 2 cut(s) 29, 360
BstHHI GCGC 3 cut(s) 28, 270, 359
BstKTI GATC 4 cut(s) 79, 319, 748, 829
BstMAI GTCTC 2 cut(s) 45, 602
BstMBI GATC 4 cut(s) 76, 316, 745, 826
BstMCI CGRYCG 2 cut(s) 829, 875
BstMWI GCNNNNNNNGC 3 cut(s) 726, 828, 1174
BstNI CCWGG 2 cut(s) 839, 1102
BstNSI RCATGY 1 cut(s) 891
BstSCI CCNGG 3 cut(s) 837, 849, 1100
BstSFI CTRYAG 1 cut(s) 523
BstSLI GKGCMC 1 cut(s) 1221
BstSNI TACGTA 1 cut(s) 1145
BstUI CGCG 3 cut(s) 268, 416, 831
BstV1I GCAGC 2 cut(s) 366, 1057
BstV2I GAAGAC 1 cut(s) 589
BstX2I RGATCY 1 cut(s) 745
BstYI RGATCY 1 cut(s) 745
BsuRI GGCC 2 cut(s) 729, 1237
BtsCI GGATG 2 cut(s) 34, 979
BtsI GCAGTG 1 cut(s) 1238
BtsIMutI CAGTG 2 cut(s) 330, 1238
BtuMI TCGCGA 2 cut(s) 416, 831
Cac8I GCNNGC 1 cut(s) 758
CaiI CAGNNNCTG 1 cut(s) 1051
CfoI GCGC 3 cut(s) 28, 270, 359
Cfr10I RCCGGY 1 cut(s) 870
Csp6I GTAC 6 cut(s) 376, 424, 442, 539, 678, 1146
CviAII CATG 4 cut(s) 120, 888, 1182, 1224
CviQI GTAC 6 cut(s) 376, 424, 442, 539, 678, 1146
DdeI CTNAG 2 cut(s) 84, 1170
DpnI GATC 4 cut(s) 78, 318, 747, 828
DpnII GATC 4 cut(s) 76, 316, 745, 826
EaeI YGGCCR 1 cut(s) 1235
Eam1104I CTCTTC 2 cut(s) 607, 804
EarI CTCTTC 2 cut(s) 607, 804
Eco105I TACGTA 1 cut(s) 1145
EcoRII CCWGG 2 cut(s) 837, 1100
Esp3I CGTCTC 1 cut(s) 45
FaeI CATG 4 cut(s) 123, 891, 1185, 1227
FalI AAGNNNNNCTT 2 cut(s) 410, 442
FaqI GGGAC 1 cut(s) 868
FatI CATG 4 cut(s) 119, 887, 1181, 1223
FauI CCCGC 1 cut(s) 651
FblI GTMKAC 2 cut(s) 112, 164
Fnu4HI GCNGC 3 cut(s) 355, 1046, 1119
FokI GGATG 2 cut(s) 21, 986
Fsp4HI GCNGC 3 cut(s) 355, 1046, 1119
FspBI CTAG 6 cut(s) 15, 761, 803, 1035, 1251, 1256
GlaI GCGC 3 cut(s) 27, 269, 358
GluI GCNGC 3 cut(s) 355, 1046, 1119
GsaI CCCAGC 1 cut(s) 354
HaeII RGCGCY 2 cut(s) 29, 360
HaeIII GGCC 2 cut(s) 729, 1237
HapII CCGG 3 cut(s) 532, 850, 871
HhaI GCGC 3 cut(s) 28, 270, 359
Hin1I GRCGYC 1 cut(s) 277
Hin1II CATG 4 cut(s) 123, 891, 1185, 1227
Hin6I GCGC 3 cut(s) 26, 268, 357
HinP1I GCGC 3 cut(s) 26, 268, 357
HincII GTYRAC 2 cut(s) 113, 165
HindII GTYRAC 2 cut(s) 113, 165
HindIII AAGCTT 1 cut(s) 1175
HinfI GANTC 6 cut(s) 166, 482, 504, 515, 543, 901
HpaII CCGG 3 cut(s) 532, 850, 871
HphI GGTGA 1 cut(s) 1168
Hpy166II GTNNAC 4 cut(s) 113, 165, 444, 680
Hpy188I TCNGA 7 cut(s) 520, 581, 607, 814, 1173, 1189, 1197
Hpy188III TCNNGA 5 cut(s) 415, 670, 803, 830, 1256
Hpy8I GTNNAC 4 cut(s) 113, 165, 444, 680
Hpy99I CGWCG 2 cut(s) 201, 260
HpyAV CCTTC 5 cut(s) 188, 480, 586, 740, 1147
HpyCH4III ACNGT 2 cut(s) 625, 859
HpyCH4IV ACGT 5 cut(s) 277, 374, 650, 1093, 1144
HpyCH4V TGCA 6 cut(s) 123, 134, 141, 153, 435, 1027
HpyF10VI GCNNNNNNNGC 3 cut(s) 726, 828, 1174
HpyF3I CTNAG 2 cut(s) 84, 1170
HpySE526I ACGT 5 cut(s) 277, 374, 650, 1093, 1144
Hsp92I GRCGYC 1 cut(s) 277
Hsp92II CATG 4 cut(s) 123, 891, 1185, 1227
HspAI GCGC 3 cut(s) 26, 268, 357
Kzo9I GATC 4 cut(s) 76, 316, 745, 826
LmnI GCTCC 2 cut(s) 23, 916
Lsp1109I GCAGC 2 cut(s) 366, 1057
LweI GCATC 1 cut(s) 128
MaeI CTAG 6 cut(s) 15, 761, 803, 1035, 1251, 1256
MaeII ACGT 5 cut(s) 277, 374, 650, 1093, 1144
MaeIII GTNAC 1 cut(s) 227
MalI GATC 4 cut(s) 78, 318, 747, 828
MboI GATC 4 cut(s) 76, 316, 745, 826
MflI RGATCY 1 cut(s) 745
MhlI GDGCHC 2 cut(s) 205, 1221
MluCI AATT 9 cut(s) 214, 223, 243, 332, 475, 550, 637, 815, 1125
MlyI GAGTC 2 cut(s) 160, 537
MmeI TCCRAC 2 cut(s) 723, 961
MnlI CCTC 9 cut(s) 40, 477, 582, 586, 807, 855, 961, 977, 1179
MroXI GAANNNNTTC 2 cut(s) 425, 1206
MseI TTAA 5 cut(s) 47, 329, 335, 549, 584
MspI CCGG 3 cut(s) 532, 850, 871
MspR9I CCNGG 3 cut(s) 839, 851, 1102
MvaI CCWGG 2 cut(s) 839, 1102
MvnI CGCG 3 cut(s) 268, 416, 831
MwoI GCNNNNNNNGC 3 cut(s) 726, 828, 1174
NciI CCSGG 1 cut(s) 851
NdeII GATC 4 cut(s) 76, 316, 745, 826
NlaIII CATG 4 cut(s) 123, 891, 1185, 1227
NlaIV GGNNCC 2 cut(s) 530, 747
NmuCI GTSAC 1 cut(s) 227
NruI TCGCGA 2 cut(s) 416, 831
NspI RCATGY 1 cut(s) 891
PciI ACATGT 1 cut(s) 887
PdmI GAANNNNTTC 2 cut(s) 425, 1206
PfeI GAWTC 4 cut(s) 482, 504, 515, 901
PflMI CCANNNNNTGG 2 cut(s) 453, 1070
PkrI GCNGC 3 cut(s) 356, 1047, 1120
Ple19I CGATCG 1 cut(s) 829
PleI GAGTC 2 cut(s) 160, 537
PpsI GAGTC 2 cut(s) 160, 537
Ppu21I YACGTR 2 cut(s) 375, 1145
PscI ACATGT 1 cut(s) 887
PshBI ATTAAT 1 cut(s) 335
Psp1406I AACGTT 1 cut(s) 650
Psp6I CCWGG 2 cut(s) 837, 1100
PspFI CCCAGC 1 cut(s) 350
PspGI CCWGG 2 cut(s) 837, 1100
PspN4I GGNNCC 2 cut(s) 530, 747
PstNI CAGNNNCTG 1 cut(s) 1051
PsuI RGATCY 1 cut(s) 745
PvuI CGATCG 1 cut(s) 829
RruI TCGCGA 2 cut(s) 416, 831
RsaI GTAC 6 cut(s) 377, 425, 443, 540, 679, 1147
RsaNI GTAC 6 cut(s) 376, 424, 442, 539, 678, 1146
SalI GTCGAC 2 cut(s) 111, 163
SaqAI TTAA 5 cut(s) 47, 329, 335, 549, 584
SatI GCNGC 3 cut(s) 355, 1046, 1119
Sau3AI GATC 4 cut(s) 76, 316, 745, 826
ScaI AGTACT 1 cut(s) 425
SchI GAGTC 2 cut(s) 160, 537
ScrFI CCNGG 3 cut(s) 839, 851, 1102
SduI GDGCHC 2 cut(s) 205, 1221
SfaNI GCATC 1 cut(s) 128
SfcI CTRYAG 1 cut(s) 523
SnaBI TACGTA 1 cut(s) 1145
SpeI ACTAGT 1 cut(s) 1034
Sse9I AATT 9 cut(s) 214, 223, 243, 332, 475, 550, 637, 815, 1125
SsiI CCGC 2 cut(s) 644, 1118
SspI AATATT 1 cut(s) 70
SspMI CTAG 6 cut(s) 15, 761, 803, 1035, 1251, 1256
StyD4I CCNGG 3 cut(s) 837, 849, 1100
TaaI ACNGT 2 cut(s) 625, 859
TaiI ACGT 5 cut(s) 280, 377, 653, 1096, 1147
TaqI TCGA 4 cut(s) 112, 164, 258, 1020
TasI AATT 9 cut(s) 214, 223, 243, 332, 475, 550, 637, 815, 1125
TatI WGTACW 2 cut(s) 423, 677
TauI GCSGC 1 cut(s) 1121
TfiI GAWTC 4 cut(s) 482, 504, 515, 901
Tru1I TTAA 5 cut(s) 47, 329, 335, 549, 584
Tru9I TTAA 5 cut(s) 47, 329, 335, 549, 584
TscAI CASTG 2 cut(s) 330, 1238
TseFI GTSAC 1 cut(s) 227
TseI GCWGC 2 cut(s) 354, 1045
Tsp45I GTSAC 1 cut(s) 227
TspDTI ATGAA 6 cut(s) 17, 418, 474, 496, 650, 1010
TspGWI ACGGA 4 cut(s) 27, 244, 429, 1044
TspRI CASTG 2 cut(s) 330, 1238
Van91I CCANNNNNTGG 2 cut(s) 453, 1070
VspI ATTAAT 1 cut(s) 335
XapI RAATTY 2 cut(s) 243, 815
XbaI TCTAGA 2 cut(s) 802, 1255
XceI RCATGY 1 cut(s) 891
XcmI CCANNNNNNNNNTGG 1 cut(s) 1230
XmiI GTMKAC 2 cut(s) 112, 164
XmnI GAANNNNTTC 2 cut(s) 425, 1206
XspI CTAG 6 cut(s) 15, 761, 803, 1035, 1251, 1256
ZraI GACGTC 1 cut(s) 278
ZrmI AGTACT 1 cut(s) 425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.