RNA polymerase II C-terminal domain phosphatase-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 936, 1134 |
| AarI | CACCTGC | 1 cut(s) | 590 |
| Acc16I | TGCGCA | 1 cut(s) | 472 |
| Acc36I | ACCTGC | 1 cut(s) | 590 |
| AccB1I | GGYRCC | 1 cut(s) | 443 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 237, 1260, 1383 |
| AccBSI | CCGCTC | 1 cut(s) | 1199 |
| AccI | GTMKAC | 3 cut(s) | 187, 555, 1143 |
| AccII | CGCG | 3 cut(s) | 492, 800, 1012 |
| AciI | CCGC | 9 cut(s) | 133, 271, 647, 792, 800, 864, 1010, 1012, 1199 |
| AclWI | GGATC | 3 cut(s) | 251, 887, 1090 |
| AcoI | YGGCCR | 1 cut(s) | 1353 |
| AcsI | RAATTY | 1 cut(s) | 344 |
| AcyI | GRCGYC | 1 cut(s) | 1006 |
| AdeI | CACNNNGTG | 1 cut(s) | 1383 |
| AfaI | GTAC | 6 cut(s) | 19, 75, 653, 1025, 1252, 1297 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 237, 762, 1260, 1383 |
| AgeI | ACCGGT | 1 cut(s) | 755 |
| AgsI | TTSAA | 5 cut(s) | 112, 176, 290, 394, 421 |
| AjnI | CCWGG | 1 cut(s) | 1392 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 641, 673 |
| AluBI | AGCT | 3 cut(s) | 223, 383, 640 |
| AluI | AGCT | 3 cut(s) | 223, 383, 640 |
| Alw26I | GTCTC | 5 cut(s) | 251, 746, 801, 1120, 1251 |
| AlwI | GGATC | 3 cut(s) | 251, 887, 1090 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 320, 1260 |
| AoxI | GGCC | 4 cut(s) | 78, 374, 1353, 1395 |
| ApeKI | GCWGC | 1 cut(s) | 468 |
| ApoI | RAATTY | 1 cut(s) | 344 |
| AseI | ATTAAT | 1 cut(s) | 674 |
| AsiGI | ACCGGT | 1 cut(s) | 755 |
| AspLEI | GCGC | 2 cut(s) | 473, 492 |
| AspS9I | GGNCC | 1 cut(s) | 375 |
| AsuHPI | GGTGA | 4 cut(s) | 354, 571, 770, 1091 |
| BanI | GGYRCC | 1 cut(s) | 443 |
| BanII | GRGCYC | 1 cut(s) | 1393 |
| BauI | CACGAG | 1 cut(s) | 684 |
| BbvI | GCAGC | 1 cut(s) | 455 |
| BccI | CCATC | 4 cut(s) | 26, 373, 796, 803 |
| BciT130I | CCWGG | 1 cut(s) | 1394 |
| BclI | TGATCA | 3 cut(s) | 148, 616, 1081 |
| BcoDI | GTCTC | 5 cut(s) | 251, 746, 801, 1120, 1251 |
| BfaI | CTAG | 5 cut(s) | 66, 372, 380, 924, 989 |
| BfmI | CTRYAG | 2 cut(s) | 40, 556 |
| BfuAI | ACCTGC | 1 cut(s) | 590 |
| BglII | AGATCT | 2 cut(s) | 7, 738 |
| BisI | GCNGC | 1 cut(s) | 469 |
| BlsI | GCNGC | 1 cut(s) | 470 |
| Bme1390I | CCNGG | 1 cut(s) | 1394 |
| BmgT120I | GGNCC | 1 cut(s) | 375 |
| BmiI | GGNNCC | 3 cut(s) | 377, 445, 531 |
| BmrFI | CCNGG | 1 cut(s) | 1394 |
| BmrI | ACTGGG | 1 cut(s) | 49 |
| BmsI | GCATC | 1 cut(s) | 417 |
| BmuI | ACTGGG | 1 cut(s) | 49 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1005, 1362 |
| BpuEI | CTTGAG | 1 cut(s) | 534 |
| BsaHI | GRCGYC | 1 cut(s) | 1006 |
| BsaI | GGTCTC | 2 cut(s) | 746, 801 |
| BsaJI | CCNNGG | 5 cut(s) | 412, 1010, 1099, 1347, 1392 |
| BsaWI | WCCGGW | 2 cut(s) | 755, 971 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 641, 671 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 237, 762, 1260, 1383 |
| Bse118I | RCCGGY | 2 cut(s) | 76, 755 |
| Bse1I | ACTGG | 4 cut(s) | 55, 523, 1265, 1362 |
| BseBI | CCWGG | 1 cut(s) | 1394 |
| BseDI | CCNNGG | 5 cut(s) | 412, 1010, 1099, 1347, 1392 |
| BseGI | GGATG | 7 cut(s) | 365, 408, 633, 782, 788, 1020, 1159 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 237, 762, 1260, 1383 |
| BseMII | CTCAG | 1 cut(s) | 398 |
| BseNI | ACTGG | 4 cut(s) | 55, 523, 1265, 1362 |
| BseRI | GAGGAG | 1 cut(s) | 885 |
| BseXI | GCAGC | 1 cut(s) | 455 |
| BseYI | CCCAGC | 1 cut(s) | 859 |
| BsgI | GTGCAG | 1 cut(s) | 262 |
| Bsh1236I | CGCG | 3 cut(s) | 492, 800, 1012 |
| BshFI | GGCC | 4 cut(s) | 80, 376, 1355, 1397 |
| BshNI | GGYRCC | 1 cut(s) | 443 |
| BshTI | ACCGGT | 1 cut(s) | 755 |
| BsiSI | CCGG | 3 cut(s) | 77, 756, 972 |
| BslFI | GGGAC | 2 cut(s) | 149, 641 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 237, 762, 1260, 1383 |
| BsmAI | GTCTC | 5 cut(s) | 251, 746, 801, 1120, 1251 |
| BsmBI | CGTCTC | 1 cut(s) | 1120 |
| BsmFI | GGGAC | 2 cut(s) | 149, 641 |
| BsnI | GGCC | 4 cut(s) | 80, 376, 1355, 1397 |
| Bso31I | GGTCTC | 2 cut(s) | 746, 801 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1393 |
| BspACI | CCGC | 9 cut(s) | 133, 271, 647, 792, 800, 864, 1010, 1012, 1199 |
| BspANI | GGCC | 4 cut(s) | 80, 376, 1355, 1397 |
| BspCNI | CTCAG | 1 cut(s) | 397 |
| BspFNI | CGCG | 3 cut(s) | 492, 800, 1012 |
| BspHI | TCATGA | 2 cut(s) | 900, 1092 |
| BspLI | GGNNCC | 3 cut(s) | 377, 445, 531 |
| BspMAI | CTGCAG | 1 cut(s) | 44 |
| BspMI | ACCTGC | 1 cut(s) | 590 |
| BspPI | GGATC | 3 cut(s) | 251, 887, 1090 |
| BspT107I | GGYRCC | 1 cut(s) | 443 |
| BspTNI | GGTCTC | 2 cut(s) | 746, 801 |
| BsrBI | CCGCTC | 1 cut(s) | 1199 |
| BsrFI | RCCGGY | 2 cut(s) | 76, 755 |
| BsrI | ACTGG | 4 cut(s) | 55, 523, 1265, 1362 |
| BssAI | RCCGGY | 2 cut(s) | 76, 755 |
| BssECI | CCNNGG | 5 cut(s) | 412, 1010, 1099, 1347, 1392 |
| BssNAI | GTATAC | 1 cut(s) | 1144 |
| BssNI | GRCGYC | 1 cut(s) | 1006 |
| BssSI | CACGAG | 1 cut(s) | 684 |
| Bst1107I | GTATAC | 1 cut(s) | 1144 |
| Bst2BI | CACGAG | 1 cut(s) | 684 |
| Bst2UI | CCWGG | 1 cut(s) | 1394 |
| Bst4CI | ACNGT | 7 cut(s) | 416, 520, 560, 571, 914, 1090, 1103 |
| Bst6I | CTCTTC | 1 cut(s) | 540 |
| BstACI | GRCGYC | 1 cut(s) | 1006 |
| BstC8I | GCNNGC | 4 cut(s) | 221, 475, 1111, 1389 |
| BstDEI | CTNAG | 3 cut(s) | 350, 384, 457 |
| BstDSI | CCRYGG | 4 cut(s) | 412, 1010, 1099, 1347 |
| BstF5I | GGATG | 7 cut(s) | 365, 408, 633, 782, 788, 1020, 1159 |
| BstFNI | CGCG | 3 cut(s) | 492, 800, 1012 |
| BstHHI | GCGC | 2 cut(s) | 473, 492 |
| BstMAI | GTCTC | 5 cut(s) | 251, 746, 801, 1120, 1251 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 77, 474, 1003 |
| BstNI | CCWGG | 1 cut(s) | 1394 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1005, 1362 |
| BstSCI | CCNGG | 1 cut(s) | 1392 |
| BstSFI | CTRYAG | 2 cut(s) | 40, 556 |
| BstUI | CGCG | 3 cut(s) | 492, 800, 1012 |
| BstV1I | GCAGC | 1 cut(s) | 455 |
| BstX2I | RGATCY | 3 cut(s) | 7, 256, 738 |
| BstYI | RGATCY | 3 cut(s) | 7, 256, 738 |
| BstZ17I | GTATAC | 1 cut(s) | 1144 |
| BsuRI | GGCC | 4 cut(s) | 80, 376, 1355, 1397 |
| BtgI | CCRYGG | 4 cut(s) | 412, 1010, 1099, 1347 |
| BtgZI | GCGATG | 1 cut(s) | 781 |
| BtsCI | GGATG | 7 cut(s) | 365, 408, 633, 782, 788, 1020, 1159 |
| BtsIMutI | CAGTG | 4 cut(s) | 27, 530, 919, 955 |
| BveI | ACCTGC | 1 cut(s) | 590 |
| Cac8I | GCNNGC | 4 cut(s) | 221, 475, 1111, 1389 |
| CaiI | CAGNNNCTG | 2 cut(s) | 320, 1260 |
| CciI | TCATGA | 2 cut(s) | 900, 1092 |
| CfoI | GCGC | 2 cut(s) | 473, 492 |
| Cfr10I | RCCGGY | 2 cut(s) | 76, 755 |
| Cfr13I | GGNCC | 1 cut(s) | 375 |
| Cfr42I | CCGCGG | 1 cut(s) | 1013 |
| CseI | GACGC | 1 cut(s) | 995 |
| Csp6I | GTAC | 6 cut(s) | 18, 74, 652, 1024, 1251, 1296 |
| CspAI | ACCGGT | 1 cut(s) | 755 |
| CviAII | CATG | 2 cut(s) | 901, 1093 |
| CviQI | GTAC | 6 cut(s) | 18, 74, 652, 1024, 1251, 1296 |
| DdeI | CTNAG | 3 cut(s) | 350, 384, 457 |
| DraIII | CACNNNGTG | 1 cut(s) | 1383 |
| EaeI | YGGCCR | 1 cut(s) | 1353 |
| Eam1104I | CTCTTC | 1 cut(s) | 540 |
| EarI | CTCTTC | 1 cut(s) | 540 |
| EciI | GGCGGA | 2 cut(s) | 260, 781 |
| Eco24I | GRGCYC | 1 cut(s) | 1393 |
| Eco31I | GGTCTC | 2 cut(s) | 746, 801 |
| EcoO109I | RGGNCCY | 1 cut(s) | 375 |
| EcoRI | GAATTC | 1 cut(s) | 344 |
| EcoRII | CCWGG | 1 cut(s) | 1392 |
| EcoT38I | GRGCYC | 1 cut(s) | 1393 |
| Esp3I | CGTCTC | 1 cut(s) | 1120 |
| FaeI | CATG | 2 cut(s) | 904, 1096 |
| FaqI | GGGAC | 2 cut(s) | 149, 641 |
| FatI | CATG | 2 cut(s) | 900, 1092 |
| FauI | CCCGC | 1 cut(s) | 126 |
| FbaI | TGATCA | 3 cut(s) | 148, 616, 1081 |
| FblI | GTMKAC | 3 cut(s) | 187, 555, 1143 |
| Fnu4HI | GCNGC | 1 cut(s) | 469 |
| FokI | GGATG | 7 cut(s) | 352, 395, 620, 769, 775, 1027, 1166 |
| FriOI | GRGCYC | 1 cut(s) | 1393 |
| Fsp4HI | GCNGC | 1 cut(s) | 469 |
| FspBI | CTAG | 5 cut(s) | 66, 372, 380, 924, 989 |
| FspI | TGCGCA | 1 cut(s) | 472 |
| GlaI | GCGC | 2 cut(s) | 472, 491 |
| GluI | GCNGC | 1 cut(s) | 469 |
| GsaI | CCCAGC | 1 cut(s) | 863 |
| HaeIII | GGCC | 4 cut(s) | 80, 376, 1355, 1397 |
| HapII | CCGG | 3 cut(s) | 77, 756, 972 |
| HgaI | GACGC | 1 cut(s) | 995 |
| HhaI | GCGC | 2 cut(s) | 473, 492 |
| Hin1I | GRCGYC | 1 cut(s) | 1006 |
| Hin1II | CATG | 2 cut(s) | 904, 1096 |
| Hin6I | GCGC | 2 cut(s) | 471, 490 |
| HinP1I | GCGC | 2 cut(s) | 471, 490 |
| HincII | GTYRAC | 1 cut(s) | 1371 |
| HindII | GTYRAC | 1 cut(s) | 1371 |
| HindIII | AAGCTT | 1 cut(s) | 221 |
| HinfI | GANTC | 7 cut(s) | 36, 161, 189, 295, 968, 983, 1028 |
| HpaII | CCGG | 3 cut(s) | 77, 756, 972 |
| HphI | GGTGA | 4 cut(s) | 354, 571, 770, 1091 |
| Hpy166II | GTNNAC | 6 cut(s) | 188, 556, 579, 1024, 1144, 1371 |
| Hpy188I | TCNGA | 3 cut(s) | 256, 751, 1086 |
| Hpy188III | TCNNGA | 2 cut(s) | 901, 1093 |
| Hpy8I | GTNNAC | 6 cut(s) | 188, 556, 579, 1024, 1144, 1371 |
| HpyAV | CCTTC | 2 cut(s) | 604, 1070 |
| HpyCH4III | ACNGT | 7 cut(s) | 416, 520, 560, 571, 914, 1090, 1103 |
| HpyCH4IV | ACGT | 3 cut(s) | 1129, 1275, 1382 |
| HpyCH4V | TGCA | 6 cut(s) | 42, 219, 243, 507, 1287, 1325 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 77, 474, 1003 |
| HpyF3I | CTNAG | 3 cut(s) | 350, 384, 457 |
| HpySE526I | ACGT | 3 cut(s) | 1129, 1275, 1382 |
| Hsp92I | GRCGYC | 1 cut(s) | 1006 |
| Hsp92II | CATG | 2 cut(s) | 904, 1096 |
| HspAI | GCGC | 2 cut(s) | 471, 490 |
| Ksp22I | TGATCA | 3 cut(s) | 148, 616, 1081 |
| KspI | CCGCGG | 1 cut(s) | 1013 |
| LmnI | GCTCC | 1 cut(s) | 1106 |
| Lsp1109I | GCAGC | 1 cut(s) | 455 |
| LweI | GCATC | 1 cut(s) | 417 |
| MaeI | CTAG | 5 cut(s) | 66, 372, 380, 924, 989 |
| MaeII | ACGT | 3 cut(s) | 1129, 1275, 1382 |
| MaeIII | GTNAC | 2 cut(s) | 565, 991 |
| MbiI | CCGCTC | 1 cut(s) | 1199 |
| MboII | GAAGA | 5 cut(s) | 86, 527, 581, 733, 1169 |
| MfeI | CAATTG | 2 cut(s) | 21, 432 |
| MflI | RGATCY | 3 cut(s) | 7, 256, 738 |
| MhlI | GDGCHC | 1 cut(s) | 1393 |
| MluCI | AATT | 4 cut(s) | 21, 344, 432, 675 |
| MlyI | GAGTC | 4 cut(s) | 45, 170, 183, 1022 |
| MmeI | TCCRAC | 1 cut(s) | 864 |
| MseI | TTAA | 5 cut(s) | 12, 201, 642, 674, 977 |
| MspA1I | CMGCKG | 1 cut(s) | 1012 |
| MspI | CCGG | 3 cut(s) | 77, 756, 972 |
| MspR9I | CCNGG | 1 cut(s) | 1394 |
| MunI | CAATTG | 2 cut(s) | 21, 432 |
| MvaI | CCWGG | 1 cut(s) | 1394 |
| MvnI | CGCG | 3 cut(s) | 492, 800, 1012 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 77, 474, 1003 |
| NlaIII | CATG | 2 cut(s) | 904, 1096 |
| NlaIV | GGNNCC | 3 cut(s) | 377, 445, 531 |
| NsbI | TGCGCA | 1 cut(s) | 472 |
| PagI | TCATGA | 2 cut(s) | 900, 1092 |
| PaqCI | CACCTGC | 1 cut(s) | 590 |
| PfeI | GAWTC | 3 cut(s) | 295, 968, 983 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 237, 1260, 1383 |
| PinAI | ACCGGT | 1 cut(s) | 755 |
| PkrI | GCNGC | 1 cut(s) | 470 |
| PleI | GAGTC | 4 cut(s) | 44, 169, 183, 1022 |
| PpsI | GAGTC | 4 cut(s) | 44, 169, 183, 1022 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1005, 1362 |
| PshBI | ATTAAT | 1 cut(s) | 674 |
| PsiI | TTATAA | 2 cut(s) | 936, 1134 |
| Psp6I | CCWGG | 1 cut(s) | 1392 |
| PspFI | CCCAGC | 1 cut(s) | 859 |
| PspGI | CCWGG | 1 cut(s) | 1392 |
| PspN4I | GGNNCC | 3 cut(s) | 377, 445, 531 |
| PspPI | GGNCC | 1 cut(s) | 375 |
| PstI | CTGCAG | 1 cut(s) | 44 |
| PstNI | CAGNNNCTG | 2 cut(s) | 320, 1260 |
| PsuI | RGATCY | 3 cut(s) | 7, 256, 738 |
| RsaI | GTAC | 6 cut(s) | 19, 75, 653, 1025, 1252, 1297 |
| RsaNI | GTAC | 6 cut(s) | 18, 74, 652, 1024, 1251, 1296 |
| SacII | CCGCGG | 1 cut(s) | 1013 |
| SaqAI | TTAA | 5 cut(s) | 12, 201, 642, 674, 977 |
| SatI | GCNGC | 1 cut(s) | 469 |
| Sau96I | GGNCC | 1 cut(s) | 375 |
| SchI | GAGTC | 4 cut(s) | 45, 170, 183, 1022 |
| ScrFI | CCNGG | 1 cut(s) | 1394 |
| SduI | GDGCHC | 1 cut(s) | 1393 |
| SfaNI | GCATC | 1 cut(s) | 417 |
| SfcI | CTRYAG | 2 cut(s) | 40, 556 |
| Sfr303I | CCGCGG | 1 cut(s) | 1013 |
| SgrBI | CCGCGG | 1 cut(s) | 1013 |
| SmlI | CTYRAG | 1 cut(s) | 549 |
| SmoI | CTYRAG | 1 cut(s) | 549 |
| Sse9I | AATT | 4 cut(s) | 21, 344, 432, 675 |
| SsiI | CCGC | 9 cut(s) | 133, 271, 647, 792, 800, 864, 1010, 1012, 1199 |
| SspI | AATATT | 3 cut(s) | 91, 129, 145 |
| SspMI | CTAG | 5 cut(s) | 66, 372, 380, 924, 989 |
| StyD4I | CCNGG | 1 cut(s) | 1392 |
| TaaI | ACNGT | 7 cut(s) | 416, 520, 560, 571, 914, 1090, 1103 |
| TaiI | ACGT | 3 cut(s) | 1132, 1278, 1385 |
| TaqI | TCGA | 3 cut(s) | 729, 906, 1209 |
| TasI | AATT | 4 cut(s) | 21, 344, 432, 675 |
| TatI | WGTACW | 1 cut(s) | 651 |
| TfiI | GAWTC | 3 cut(s) | 295, 968, 983 |
| Tru1I | TTAA | 5 cut(s) | 12, 201, 642, 674, 977 |
| Tru9I | TTAA | 5 cut(s) | 12, 201, 642, 674, 977 |
| TscAI | CASTG | 4 cut(s) | 34, 530, 919, 955 |
| TseI | GCWGC | 1 cut(s) | 468 |
| TspDTI | ATGAA | 3 cut(s) | 889, 1080, 1170 |
| TspGWI | ACGGA | 4 cut(s) | 196, 885, 1336, 1356 |
| TspRI | CASTG | 4 cut(s) | 34, 530, 919, 955 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 237, 1260, 1383 |
| VspI | ATTAAT | 1 cut(s) | 674 |
| XapI | RAATTY | 1 cut(s) | 344 |
| XmiI | GTMKAC | 3 cut(s) | 187, 555, 1143 |
| XspI | CTAG | 5 cut(s) | 66, 372, 380, 924, 989 |