Rh2DG599600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
83148397 .. 83154876
6480 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG599600.1

Sequence Viewer

Length: 2292 bp
ATGAGAGGTGGTGATAGTACCAAAAGAATCTACTCTAGAAAATCCCAGTCGACCTTGGGAGCAGTACCGGCCTCTGAGCTGATGAATATTGAGATTGATGATCTCCCCGATGTTGTGTTGGTTGAAATTCTTTGTCGGCTTCCATGCTATAAGTTTGTTTCAAAATGCAAGTGTGTGTCCAAGCGTTGGTGCAATGTCATGTCCGCTCCTTATTTTCTTGCCCGCTTTCTATGTCTCCAGAGTGATCGTGAGCAAACACCAATAGTTCGTACTCTGATAACCAACAGAGGGGAGGAGTTCCTTACTAGAATGTCATCGTCCACCAAGCCGCTAGCTCTGTTGTTTGAAAGACTCATGAGTTCTCACCATTTGGAACAAGAGCCGCTAGTGGTAGCTACGTATAATGACTTAGTTTTGTGCTGTTCAACTGGGGTCTATTATCAACGTGATTACTACATCTGCAATCCGTGCACAATTCAGTGGGTTCCTGTGCCTCCCCCTCCTCGAGTTTACCGGTATACACCAGTGGGATTCATATGTGATCTTCCCTACTATAGCTGTACGAAAGATGATCAGGGAGGAAGTTTCATTCAGGTTAATGCGGAGTATAGGTGCAGGATAGTGAGATTAATTCTTCGTAAGAGATCTGTCTGTAAACTCAAAGTGCAAATCTTCTCCTCTGATACTGGTGAATGGATAACGTCAACTATATCAATTCCATCAGGTTTTATTTCTAACACCGTCCCTCTAGAGAGGAGCTTCTCTTACAATGGCATGCTGTATTTTGTGGGTGATGAACCTGGTGATCAGAATTTTCTTATGGGGTTGGATCCATTCATGATCAACAATAGTAATAGTGCTCTTAGTTTATCTAGTACTAGCCGTAATAGTACTAATGGTGACAATATCATTGATCACTATAAATGTCGTTTTATTCGATTTGATGATCCAGACTCTTTTCTACTTCGGTATCTTGGTGAATACAGAGGGTGTCTGCACATGTGCGACTATCATGATCATACCTCTACTTTTTTTGTTCGGGAGTTGAAAGAAGAAGAAATGCATGGAGGAGCTGGCAAATTATGTTTGGAAGGCATGATGAAGGATTATTCAATGGACATAAAAATGGTTCCGGGTTATGATATTGTTGATTTACGATTTTTAGACCCCAATAACGAGGATATTTTATATATGTACATAGCCAATGACATTGTCAGAGCTCCACCAAAGACTAGACCTTTCTGTAATTCCCAGTCGGACCCAATTCGGGTTCGGACCCCCTCCGCATTTCCCATCACTCCTCCGACCTCAAAGTGTGTATTGGAGATGGCGAAGGCTTCCAAGGGCAACCATGATGAGTTTGAAGACGATGATGAAGAAAATCAAGCAGGGAAAGCAGAAGGGCAAGGGAGGGAGAAGAACCGGTCGAAACATTCCGAAACAGAGCAGAGAAGGAGGAGCAAGATTAATGAGAGATTTCAAAAGTTGAGAGAGATCATACCCGAAAATGATCAGAAAAGAGATAAGGCTTCTTTCTTGTTAGAGGTTATAGAGTATATACAATTTTTACATGAGAAGATAAATTTGTATGAGGGTTCGTACCAAGGATGGAATCCAGAGCCAACGAAGTTGATCCCCTGGAAAAGTCGTCATAGGCCTGGAGAAAATTTTGCAGATCACTCTCAAGTCATGAACAATGGTTCTGGTCAGGAGAATAATGTTGTTGCCTCCCCTGCTATGCTCACCAATGCACAAAACTCAGTGGAATCTGACTTGGACTCTGCTGCTGTATACAAAGCACTAGATCACATTCGTGGACTAGCTACTCCATCCGTTCCTAATATGAACCAGCAAAACATCTTTGACCCTATTGAGAGCATTGGAGCTCCCACGCAACCATTGCAAGAATCTAATACTGATGTTGAGAACATGGCTTCTCAATCCCAATACCAATTGTGGCCCGGTATTACATCAACAACTGTTACAGACAGTAAAATTAATAGGCAGGACGAAAATAAATCGGTTAGCATCTCAAGTGCCTACTCTCAAGGGGTATTGAATAATCTGACCCTATCACTGCGATCCTCTGGTGTGGATTTGTCCCAGGCCAGCATCAATGTTGAACTTGATGTTGGAAATCGAGCAGACGGTGGCCTGAAATCAATGGCATCTAGTTCACAGGCTCATCTCAGACAATGCTTGAACAATCAAATGATGACGCATTCTCAAGTAAGCAGCTATAACGAGAACTTTGAACAAGCTCATAAGCGGTTCAGAACAGGAGAAAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

763

Amino Acids

86.51

Weight (kDa)

5.9

Isoelectric Point (pI)

49.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
b-prop_At3g26010-like PF24750 123 - 266 3.2e-10 F-box protein At3g26010-like, beta-propeller
HLH PF00010 475 - 523 1.5e-15 Helix-loop-helix DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000216)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38860 AT5G38860
fragaria_vesca FvH4_2g24261 FvH4_2g24270 FvH4_3g35490 FvH4_6g03181 FvH4_6g03182 FvH4_6g03221 FvH4_6g03380 FvH4_6g05203 FvH4_6g31981 FvH4_6g32061 FvH4_6g37041 FvH4_6g39371 FvH4_6g45291 FvH4_6g45890 FvH4_6g46240 FvH4_6g46241 FvH4_6g46242 FvH4_6g46260 FvH4_6g46280 FvH4_6g46280 FvH4_6g46280 FvH4_6g46290 FvH4_6g46290 FvH4_6g46380
malus_domestica MD02G1008700.v1.1 MD02G1008900.v1.1 MD04G1180900.v1.1 MD04G1181200.v1.1 MD09G1075900.v1.1 MD09G1201600.v1.1 MD15G1017800.v1.1 MD17G1066600.v1.1
prunus_persica Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G512600_v2.0.a1 Prupe.3G059500_v2.0.a1 Prupe.3G059600_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.6G076400_v2.0.a1
pyrus_communis pycom02g00750 pycom03g20320 pycom09g00330 pycom11g08760 pycom17g04880 pycom17g06710 pycom17g19130
rosa_chinensis RchiOBHm_Chr2g0123691 RchiOBHm_Chr2g0164671 RchiOBHm_Chr2g0164681 RchiOBHm_Chr2g0164721 RchiOBHm_Chr2g0164741 RchiOBHm_Chr6g0275871 RchiOBHm_Chr6g0276071 RchiOBHm_Chr6g0291931 RchiOBHm_Chr6g0292091 RchiOBHm_Chr6g0292271 RchiOBHm_Chr7g0221261
rosa_laevigata RLG00000002165 RLG00000007725 RLG00000012062 RLG00000012543 RLG00000013427 RLG00000021441 RLG00000021477 RLG00000021478 RLG00000021480 RLG00000021481
rosa_multiflora Rmu_co8220318.1_g000001 Rmu_co8427407.1_g000001 Rmu_sc0000946.1_g000006 Rmu_sc0000946.1_g000007 Rmu_sc0000946.1_g000010 Rmu_sc0000946.1_g000012 Rmu_sc0000946.1_g000013 Rmu_sc0002030.1_g000015 Rmu_sc0002870.1_g000002 Rmu_sc0003200.1_g000004 Rmu_sc0004915.1_g000002 Rmu_sc0004991.1_g000006 Rmu_sc0006928.1_g000020 Rmu_sc0007384.1_g000001 Rmu_sc0030722.1_g000001 Rmu_sc0030723.1_g000001 Rmu_ssc0000076.1_g000019 Rmu_ssc0000076.1_g000025 Rmu_ssc0000318.1_g000001
rosa_roxburghii Rroxscaffold_2G00086340 Rroxscaffold_2G00086360 Rroxscaffold_2G00086370 Rroxscaffold_2G00086380 Rroxscaffold_2G00086830 Rroxscaffold_2G00087380 Rroxscaffold_2G00120420 Rroxscaffold_7G00175260 Rroxscaffold_7G00175600 Rroxscaffold_7G00177970 Rroxscaffold_7G00192830
rosa_rugosa Rorug02G0247400 Rorug02G0506200 Rorug02G0508300 Rorug02G0509700 Rorug05G0378800 Rorug06G0096600 Rorug06G0096700 Rorug06G0221800
rosa_samantha Rh2AG577600 Rh2AG577700 Rh2AG577800 Rh2AG578000 Rh2AG578100 Rh2BG589200 Rh2CG559800 Rh2DG594400 Rh2DG594500 Rh2DG597800 Rh2DG599400 Rh2DG599500 Rh2DG599600 Rh6AG338400 Rh6BG211200 Rh6BG212600 Rh6BG342900 Rh6BG345600 Rh6CG214800 Rh6CG349100 Rh6CG350600 Rh6CG350700 Rh6CG352600 Rh7AG340800
rosa_wichuraiana Rw1G028590 Rw2G047980 Rw2G047990 Rw5G043360 Rw6G018180 Rw6G029200 Rw6G029450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 186
AccBSI CCGCTC 1 cut(s) 206
AccI GTMKAC 3 cut(s) 50, 518, 1791
AciI CCGC 7 cut(s) 204, 223, 329, 383, 602, 1284, 2269
AclWI GGATC 5 cut(s) 824, 837, 941, 1627, 2076
AcsI RAATTY 4 cut(s) 126, 811, 1582, 1666
AfaI GTAC 8 cut(s) 19, 66, 271, 562, 877, 892, 1196, 1601
AfiI CCNNNNNNNGG 3 cut(s) 186, 288, 1267
AflIII ACRYGT 1 cut(s) 999
AgeI ACCGGT 2 cut(s) 513, 1422
AjnI CCWGG 4 cut(s) 799, 1637, 1657, 2103
AjuI GAANNNNNNNTTGG 2 cut(s) 2115, 2147
AleI CACNNNNGTG 1 cut(s) 1812
Alw21I GWGCWC 4 cut(s) 473, 862, 1222, 1888
Alw26I GTCTC 1 cut(s) 239
Alw44I GTGCAC 1 cut(s) 469
AlwI GGATC 5 cut(s) 824, 837, 941, 1627, 2076
Ama87I CYCGRG 1 cut(s) 504
AoxI GGCC 5 cut(s) 69, 1655, 1958, 2106, 2152
ApaLI GTGCAC 1 cut(s) 469
ApeKI GCWGC 2 cut(s) 1784, 2235
ApoI RAATTY 4 cut(s) 126, 811, 1582, 1666
AseI ATTAAT 3 cut(s) 629, 1467, 1998
AsiGI ACCGGT 2 cut(s) 513, 1422
AspS9I GGNCC 3 cut(s) 1258, 1275, 1959
AsuC2I CCSGG 2 cut(s) 1134, 1962
AsuHPI GGTGA 8 cut(s) 23, 356, 701, 803, 815, 911, 989, 1735
AsuNHI GCTAGC 1 cut(s) 331
AvaI CYCGRG 1 cut(s) 504
AvaII GGWCC 2 cut(s) 1258, 1275
BaeGI GKGCMC 1 cut(s) 473
BaeI ACNNNNGTAYC 2 cut(s) 953, 986
BamHI GGATCC 1 cut(s) 829
BanII GRGCYC 2 cut(s) 1222, 1888
BbsI GAAGAC 1 cut(s) 1371
Bbv12I GWGCWC 4 cut(s) 473, 862, 1222, 1888
BbvI GCAGC 2 cut(s) 1771, 2247
BccI CCATC 5 cut(s) 727, 1301, 1321, 1602, 1837
BceAI ACGGC 1 cut(s) 867
BciT130I CCWGG 4 cut(s) 801, 1639, 1659, 2105
BclI TGATCA 6 cut(s) 571, 805, 840, 913, 1015, 1510
BcnI CCSGG 2 cut(s) 1134, 1962
BcoDI GTCTC 1 cut(s) 239
BfmI CTRYAG 1 cut(s) 553
BglII AGATCT 1 cut(s) 644
BisI GCNGC 4 cut(s) 329, 383, 1785, 2236
BlsI GCNGC 4 cut(s) 330, 384, 1786, 2237
BmcAI AGTACT 2 cut(s) 877, 892
Bme1390I CCNGG 6 cut(s) 801, 1134, 1639, 1659, 1962, 2105
Bme18I GGWCC 2 cut(s) 1258, 1275
BmeT110I CYCGRG 1 cut(s) 504
BmgT120I GGNCC 3 cut(s) 1258, 1275, 1959
BmiI GGNNCC 5 cut(s) 486, 831, 1131, 1260, 1277
BmrFI CCNGG 6 cut(s) 801, 1134, 1639, 1659, 1962, 2105
BmrI ACTGGG 3 cut(s) 40, 438, 1246
BmsI GCATC 3 cut(s) 2037, 2121, 2177
BmtI GCTAGC 1 cut(s) 335
BmuI ACTGGG 3 cut(s) 40, 438, 1246
BpiI GAAGAC 1 cut(s) 1371
BpmI CTGGAG 2 cut(s) 221, 1680
BpuEI CTTGAG 4 cut(s) 1668, 2017, 2031, 2211
BpuMI CCSGG 2 cut(s) 1134, 1962
BsaAI YACGTR 1 cut(s) 399
BsaJI CCNNGG 5 cut(s) 54, 1341, 1603, 1637, 2103
BsaWI WCCGGW 2 cut(s) 513, 1422
BsaXI ACNNNNNCTCC 2 cut(s) 596, 626
Bsc4I CCNNNNNNNGG 3 cut(s) 186, 288, 1267
Bse118I RCCGGY 3 cut(s) 67, 513, 1422
Bse1I ACTGG 5 cut(s) 46, 433, 524, 691, 1252
Bse3DI GCAATG 2 cut(s) 199, 1898
BseBI CCWGG 4 cut(s) 801, 1639, 1659, 2105
BseDI CCNNGG 5 cut(s) 54, 1341, 1603, 1637, 2103
BseGI GGATG 2 cut(s) 1613, 1829
BseLI CCNNNNNNNGG 3 cut(s) 186, 288, 1267
BseMI GCAATG 2 cut(s) 199, 1898
BseMII CTCAG 3 cut(s) 66, 1773, 2203
BseNI ACTGG 5 cut(s) 46, 433, 524, 691, 1252
BseRI GAGGAG 7 cut(s) 308, 492, 667, 769, 1083, 1290, 1471
BseSI GKGCMC 1 cut(s) 473
BseXI GCAGC 2 cut(s) 1771, 2247
BsgI GTGCAG 2 cut(s) 634, 980
Bsh1285I CGRYCG 1 cut(s) 1427
BshFI GGCC 5 cut(s) 71, 1657, 1960, 2108, 2154
BshTI ACCGGT 2 cut(s) 513, 1422
BsiEI CGRYCG 1 cut(s) 1427
BsiHKAI GWGCWC 4 cut(s) 473, 862, 1222, 1888
BsiHKCI CYCGRG 1 cut(s) 504
BsiSI CCGG 5 cut(s) 68, 514, 1133, 1423, 1962
BslFI GGGAC 2 cut(s) 728, 2086
BslI CCNNNNNNNGG 3 cut(s) 186, 288, 1267
BsmAI GTCTC 1 cut(s) 239
BsmFI GGGAC 2 cut(s) 728, 2086
BsmI GAATGC 1 cut(s) 2221
BsnI GGCC 5 cut(s) 71, 1657, 1960, 2108, 2154
BsoBI CYCGRG 1 cut(s) 504
Bsp1286I GDGCHC 4 cut(s) 473, 862, 1222, 1888
Bsp1407I TGTACA 1 cut(s) 1194
BspACI CCGC 7 cut(s) 204, 223, 329, 383, 602, 1284, 2269
BspANI GGCC 5 cut(s) 71, 1657, 1960, 2108, 2154
BspCNI CTCAG 3 cut(s) 67, 1772, 2202
BspHI TCATGA 4 cut(s) 354, 837, 1012, 1689
BspLI GGNNCC 5 cut(s) 486, 831, 1131, 1260, 1277
BspOI GCTAGC 1 cut(s) 335
BspPI GGATC 5 cut(s) 824, 837, 941, 1627, 2076
BsrBI CCGCTC 1 cut(s) 206
BsrDI GCAATG 2 cut(s) 199, 1898
BsrFI RCCGGY 3 cut(s) 67, 513, 1422
BsrGI TGTACA 1 cut(s) 1194
BsrI ACTGG 5 cut(s) 46, 433, 524, 691, 1252
BssAI RCCGGY 3 cut(s) 67, 513, 1422
BssECI CCNNGG 5 cut(s) 54, 1341, 1603, 1637, 2103
BssNAI GTATAC 2 cut(s) 519, 1792
BssT1I CCWWGG 3 cut(s) 54, 1341, 1603
Bst1107I GTATAC 2 cut(s) 519, 1792
Bst2UI CCWGG 4 cut(s) 801, 1639, 1659, 2105
Bst4CI ACNGT 4 cut(s) 742, 1981, 1991, 2150
BstAPI GCANNNNNTGC 2 cut(s) 468, 1900
BstAUI TGTACA 1 cut(s) 1194
BstBAI YACGTR 1 cut(s) 399
BstC8I GCNNGC 5 cut(s) 223, 333, 776, 1075, 2110
BstDEI CTNAG 5 cut(s) 75, 409, 863, 1759, 2189
BstF5I GGATG 2 cut(s) 1613, 1829
BstMAI GTCTC 1 cut(s) 239
BstMCI CGRYCG 1 cut(s) 1427
BstMWI GCNNNNNNNGC 5 cut(s) 68, 468, 1394, 1733, 1900
BstNI CCWGG 4 cut(s) 801, 1639, 1659, 2105
BstNSI RCATGY 2 cut(s) 778, 1003
BstSCI CCNGG 6 cut(s) 799, 1132, 1637, 1657, 1960, 2103
BstSFI CTRYAG 1 cut(s) 553
BstSLI GKGCMC 1 cut(s) 473
BstSNI TACGTA 1 cut(s) 399
BstV1I GCAGC 2 cut(s) 1771, 2247
BstV2I GAAGAC 1 cut(s) 1371
BstX2I RGATCY 2 cut(s) 644, 829
BstYI RGATCY 2 cut(s) 644, 829
BstZ17I GTATAC 2 cut(s) 519, 1792
BsuRI GGCC 5 cut(s) 71, 1657, 1960, 2108, 2154
BtsCI GGATG 2 cut(s) 1613, 1829
BtsI GCAGTG 1 cut(s) 2075
BtsIMutI CAGTG 4 cut(s) 485, 531, 1767, 2075
Cac8I GCNNGC 5 cut(s) 223, 333, 776, 1075, 2110
CciI TCATGA 4 cut(s) 354, 837, 1012, 1689
Cfr10I RCCGGY 3 cut(s) 67, 513, 1422
Cfr13I GGNCC 3 cut(s) 1258, 1275, 1959
CseI GACGC 1 cut(s) 2227
CsiI ACCWGGT 1 cut(s) 799
Csp6I GTAC 8 cut(s) 18, 65, 270, 561, 876, 891, 1195, 1600
CspAI ACCGGT 2 cut(s) 513, 1422
CviQI GTAC 8 cut(s) 18, 65, 270, 561, 876, 891, 1195, 1600
DdeI CTNAG 5 cut(s) 75, 409, 863, 1759, 2189
Ecl136II GAGCTC 2 cut(s) 1220, 1886
Eco105I TACGTA 1 cut(s) 399
Eco130I CCWWGG 3 cut(s) 54, 1341, 1603
Eco147I AGGCCT 1 cut(s) 1657
Eco24I GRGCYC 2 cut(s) 1222, 1888
Eco47I GGWCC 2 cut(s) 1258, 1275
Eco53kI GAGCTC 2 cut(s) 1220, 1886
Eco88I CYCGRG 1 cut(s) 504
EcoICRI GAGCTC 2 cut(s) 1220, 1886
EcoRII CCWGG 4 cut(s) 799, 1637, 1657, 2103
EcoT14I CCWWGG 3 cut(s) 54, 1341, 1603
EcoT22I ATGCAT 1 cut(s) 1065
EcoT38I GRGCYC 2 cut(s) 1222, 1888
ErhI CCWWGG 3 cut(s) 54, 1341, 1603
FaqI GGGAC 2 cut(s) 728, 2086
FauI CCCGC 1 cut(s) 230
FauNDI CATATG 1 cut(s) 536
FbaI TGATCA 6 cut(s) 571, 805, 840, 913, 1015, 1510
FblI GTMKAC 3 cut(s) 50, 518, 1791
Fnu4HI GCNGC 4 cut(s) 329, 383, 1785, 2236
FokI GGATG 2 cut(s) 1620, 1816
FriOI GRGCYC 2 cut(s) 1222, 1888
Fsp4HI GCNGC 4 cut(s) 329, 383, 1785, 2236
GluI GCNGC 4 cut(s) 329, 383, 1785, 2236
GsuI CTGGAG 2 cut(s) 221, 1680
HaeIII GGCC 5 cut(s) 71, 1657, 1960, 2108, 2154
HapII CCGG 5 cut(s) 68, 514, 1133, 1423, 1962
HgaI GACGC 1 cut(s) 2227
HincII GTYRAC 2 cut(s) 51, 705
HindII GTYRAC 2 cut(s) 51, 705
HinfI GANTC 8 cut(s) 27, 351, 531, 953, 1612, 1766, 1778, 1907
HpaII CCGG 5 cut(s) 68, 514, 1133, 1423, 1962
HphI GGTGA 8 cut(s) 23, 356, 701, 803, 815, 911, 989, 1735
HpyAV CCTTC 5 cut(s) 1085, 1096, 1327, 1394, 1446
HpyCH4III ACNGT 4 cut(s) 742, 1981, 1991, 2150
HpyCH4IV ACGT 3 cut(s) 398, 445, 701
HpyF10VI GCNNNNNNNGC 5 cut(s) 68, 468, 1394, 1733, 1900
HpyF3I CTNAG 5 cut(s) 75, 409, 863, 1759, 2189
HpySE526I ACGT 3 cut(s) 398, 445, 701
Ksp22I TGATCA 6 cut(s) 571, 805, 840, 913, 1015, 1510
LmnI GCTCC 8 cut(s) 59, 211, 756, 1070, 1225, 1458, 1883, 1891
Lsp1109I GCAGC 2 cut(s) 1771, 2247
LweI GCATC 3 cut(s) 2037, 2121, 2177
MabI ACCWGGT 1 cut(s) 799
MaeII ACGT 3 cut(s) 398, 445, 701
MaeIII GTNAC 2 cut(s) 899, 1981
MbiI CCGCTC 1 cut(s) 206
MboII GAAGA 9 cut(s) 536, 626, 664, 1064, 1067, 1376, 1388, 1429, 1588
MfeI CAATTG 1 cut(s) 1952
MflI RGATCY 2 cut(s) 644, 829
MhlI GDGCHC 4 cut(s) 473, 862, 1222, 1888
MlyI GAGTC 3 cut(s) 345, 947, 1772
MmeI TCCRAC 4 cut(s) 807, 1236, 1328, 2113
Mph1103I ATGCAT 1 cut(s) 1065
MseI TTAA 4 cut(s) 597, 629, 1467, 1998
MslI CAYNNNNRTG 2 cut(s) 1124, 1812
MspI CCGG 5 cut(s) 68, 514, 1133, 1423, 1962
MspR9I CCNGG 6 cut(s) 801, 1134, 1639, 1659, 1962, 2105
MunI CAATTG 1 cut(s) 1952
Mva1269I GAATGC 1 cut(s) 2221
MvaI CCWGG 4 cut(s) 801, 1639, 1659, 2105
MwoI GCNNNNNNNGC 5 cut(s) 68, 468, 1394, 1733, 1900
NciI CCSGG 2 cut(s) 1134, 1962
NdeI CATATG 1 cut(s) 536
NheI GCTAGC 1 cut(s) 331
NlaIV GGNNCC 5 cut(s) 486, 831, 1131, 1260, 1277
NmuCI GTSAC 1 cut(s) 899
NsiI ATGCAT 1 cut(s) 1065
NspI RCATGY 2 cut(s) 778, 1003
OliI CACNNNNGTG 1 cut(s) 1812
PaeI GCATGC 1 cut(s) 778
PaeR7I CTCGAG 1 cut(s) 504
PagI TCATGA 4 cut(s) 354, 837, 1012, 1689
PceI AGGCCT 1 cut(s) 1657
PciI ACATGT 1 cut(s) 999
PcsI WCGNNNNNNNCGW 1 cut(s) 934
PctI GAATGC 1 cut(s) 2221
PfeI GAWTC 5 cut(s) 27, 531, 1612, 1766, 1907
PflFI GACNNNGTC 1 cut(s) 1211
PflMI CCANNNNNTGG 1 cut(s) 186
PinAI ACCGGT 2 cut(s) 513, 1422
PkrI GCNGC 4 cut(s) 330, 384, 1786, 2237
PleI GAGTC 3 cut(s) 345, 947, 1772
PpsI GAGTC 3 cut(s) 345, 947, 1772
Ppu21I YACGTR 1 cut(s) 399
PscI ACATGT 1 cut(s) 999
PshBI ATTAAT 3 cut(s) 629, 1467, 1998
Psp124BI GAGCTC 2 cut(s) 1222, 1888
Psp6I CCWGG 4 cut(s) 799, 1637, 1657, 2103
PspGI CCWGG 4 cut(s) 799, 1637, 1657, 2103
PspN4I GGNNCC 5 cut(s) 486, 831, 1131, 1260, 1277
PspPI GGNCC 3 cut(s) 1258, 1275, 1959
PspXI VCTCGAGB 1 cut(s) 504
PsuI RGATCY 2 cut(s) 644, 829
PsyI GACNNNGTC 1 cut(s) 1211
RsaI GTAC 8 cut(s) 19, 66, 271, 562, 877, 892, 1196, 1601
RsaNI GTAC 8 cut(s) 18, 65, 270, 561, 876, 891, 1195, 1600
RseI CAYNNNNRTG 2 cut(s) 1124, 1812
SacI GAGCTC 2 cut(s) 1222, 1888
SalI GTCGAC 1 cut(s) 49
SaqAI TTAA 4 cut(s) 597, 629, 1467, 1998
SatI GCNGC 4 cut(s) 329, 383, 1785, 2236
Sau96I GGNCC 3 cut(s) 1258, 1275, 1959
ScaI AGTACT 2 cut(s) 877, 892
SchI GAGTC 3 cut(s) 345, 947, 1772
ScrFI CCNGG 6 cut(s) 801, 1134, 1639, 1659, 1962, 2105
SduI GDGCHC 4 cut(s) 473, 862, 1222, 1888
SexAI ACCWGGT 1 cut(s) 799
SfaNI GCATC 3 cut(s) 2037, 2121, 2177
SfcI CTRYAG 1 cut(s) 553
Sfr274I CTCGAG 1 cut(s) 504
SinI GGWCC 2 cut(s) 1258, 1275
SlaI CTCGAG 1 cut(s) 504
SmiMI CAYNNNNRTG 2 cut(s) 1124, 1812
SmlI CTYRAG 5 cut(s) 504, 1683, 2032, 2046, 2226
SmoI CTYRAG 5 cut(s) 504, 1683, 2032, 2046, 2226
SnaBI TACGTA 1 cut(s) 399
SphI GCATGC 1 cut(s) 778
SseBI AGGCCT 1 cut(s) 1657
SsiI CCGC 7 cut(s) 204, 223, 329, 383, 602, 1284, 2269
SspI AATATT 1 cut(s) 88
SstI GAGCTC 2 cut(s) 1222, 1888
StuI AGGCCT 1 cut(s) 1657
StyD4I CCNGG 6 cut(s) 799, 1132, 1637, 1657, 1960, 2103
StyI CCWWGG 3 cut(s) 54, 1341, 1603
TaaI ACNGT 4 cut(s) 742, 1981, 1991, 2150
TaiI ACGT 3 cut(s) 401, 448, 704
TaqI TCGA 5 cut(s) 50, 505, 937, 1427, 2140
TatI WGTACW 3 cut(s) 875, 890, 1194
TauI GCSGC 2 cut(s) 331, 385
TfiI GAWTC 5 cut(s) 27, 531, 1612, 1766, 1907
Tru1I TTAA 4 cut(s) 597, 629, 1467, 1998
Tru9I TTAA 4 cut(s) 597, 629, 1467, 1998
TscAI CASTG 4 cut(s) 485, 531, 1767, 2082
TseFI GTSAC 1 cut(s) 899
TseI GCWGC 2 cut(s) 1784, 2235
Tsp45I GTSAC 1 cut(s) 899
TspDTI ATGAA 9 cut(s) 98, 523, 577, 810, 826, 1115, 1389, 1706, 1859
TspGWI ACGGA 2 cut(s) 456, 1822
TspRI CASTG 4 cut(s) 485, 531, 1767, 2082
Tth111I GACNNNGTC 1 cut(s) 1211
Van91I CCANNNNNTGG 1 cut(s) 186
VneI GTGCAC 1 cut(s) 469
VpaK11BI GGWCC 2 cut(s) 1258, 1275
VspI ATTAAT 3 cut(s) 629, 1467, 1998
XapI RAATTY 4 cut(s) 126, 811, 1582, 1666
XbaI TCTAGA 2 cut(s) 35, 748
XceI RCATGY 2 cut(s) 778, 1003
XhoI CTCGAG 1 cut(s) 504
XmiI GTMKAC 3 cut(s) 50, 518, 1791
ZrmI AGTACT 2 cut(s) 877, 892
Zsp2I ATGCAT 1 cut(s) 1065
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.