Prupe.1G509300_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000216
Physical Location & Seq
Forward (+)
41973760 .. 41982000
8241 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G509300.3

Sequence Viewer

Length: 1491 bp
ATGAGCTCTGAGCAGGAAATTGAATGCGGCGGGGCTTCCATGAAGCTTGTATCTGGATTTCTTAAGCAGAAGCAATTCGAGGAGGACATTCAATGCAGGTTGATTAATGGCGATACTCCTACCAAAGGAAGGAAAAGATCCCAGTCATCTCTTGGATTGCCAACCTCTAGTCAGTTAAAAAGATCAAAGAGATCATCACCAGCAGAAAGAAGACCATCATCAATTGATGATCTCCCTGACACGGCATTGGTTGAAATCCTTTGCCGACTTCCATCAAGTAAATTTGTGTTTCAATGCCGGTGTGTGTCCAAGTGTTGGCGCACACTCATCTCAGATCCTTATTTTATCGGCCGCTTTGTACATATCCAAGGTTATAGGAAAACTCCGAAGATATGCACTCTAATAAGTCCAAAAGGAGAGGAATTCCCTCCTAAAATGCCATGGTCATCCAAGCTACTAAACCCAGTGTTCAAACGAATAATGAGTTTCCACTCTTTGACAAAAGAGCCAGTTGTGGTAGCAACGTATAATGACTTAGTTTTGTGCTGCGCAACTGAGGATTATCAACACAATTACTACATCTGCAATGCATACACCATGCAATGGGTTGCTCTTCCTCCCACCCCAGGTCGATGCCACGATAGGGTACTAGTGGGATTCATCTGTAATATTCCCTACTATAATTCTAAGAAAGAAGATTGGAAAGGGCATAACGTCCAGCTTAATACTGAGTGTATGTGCAACGTTGTGAGAATTCTGCCTCCTGATGAATCTGCAAATGATGACGAATGTGATTCCTTAAAATTAAGCGTGGAGATCTTCTCTTCTGAGACTGGTGAATGGAGAGAATCAGTTGTGGCTTCCCCACGATACTTTGATTTTGATGACCTTGAAGATATCTCCTTTGCATACAATGGGATGTTATATTGGACAAGTGACGAAGAACTCCTTTTTGTTGGTTTGGGTCCCTTCAACGACAATAACACGACAAGTAGTAGTAGTGGTAATGGTGATGGCATTATTGATCATAAACTTCACTTCACTGTATTTGAGGAGCCTCTAAATGGACGTTTTGTAGTTGAGTACCTAGGTATGTTCGGAGGATGTGTGTGGATGTGTGACTTTAAGGCGGCTACCAATACTCTGTATGTTTGGGAGTTGAAAGAACAAGATCATGATCGGATGGTCGAAGGAGCTGCTGGCAGATTGTGTTTAACTAACCACAGGGTATATCACTTGGACCCAAAAATGTATCTGGATGGTCCATTTACGTGCGAAATGCAGGCTTTTGACCCAAATAATAAGGATATTTTGTACCTGCGTGTGGATGGAGATATTATCAAGTGCAACATTCATACGAAAAAGTGGTCTAGGATAGTTAGACGGTGTCCAGTTGGTAATGGTGACTATTGGCCAGTTGAGCTCCCATGGTGGCCGACTCCAGTTCCTAGATTACCGCAGCATGCCCATGGTGGAGGAACTAGCAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

497

Amino Acids

56.58

Weight (kDa)

6.04

Isoelectric Point (pI)

54.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000216)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38860 AT5G38860
fragaria_vesca FvH4_2g24261 FvH4_2g24270 FvH4_3g35490 FvH4_6g03181 FvH4_6g03182 FvH4_6g03221 FvH4_6g03380 FvH4_6g05203 FvH4_6g31981 FvH4_6g32061 FvH4_6g37041 FvH4_6g39371 FvH4_6g45291 FvH4_6g45890 FvH4_6g46240 FvH4_6g46241 FvH4_6g46242 FvH4_6g46260 FvH4_6g46280 FvH4_6g46280 FvH4_6g46280 FvH4_6g46290 FvH4_6g46290 FvH4_6g46380
malus_domestica MD02G1008700.v1.1 MD02G1008900.v1.1 MD04G1180900.v1.1 MD04G1181200.v1.1 MD09G1075900.v1.1 MD09G1201600.v1.1 MD15G1017800.v1.1 MD17G1066600.v1.1
prunus_persica Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G512600_v2.0.a1 Prupe.3G059500_v2.0.a1 Prupe.3G059600_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.6G076400_v2.0.a1
pyrus_communis pycom02g00750 pycom03g20320 pycom09g00330 pycom11g08760 pycom17g04880 pycom17g06710 pycom17g19130
rosa_chinensis RchiOBHm_Chr2g0123691 RchiOBHm_Chr2g0164671 RchiOBHm_Chr2g0164681 RchiOBHm_Chr2g0164721 RchiOBHm_Chr2g0164741 RchiOBHm_Chr6g0275871 RchiOBHm_Chr6g0276071 RchiOBHm_Chr6g0291931 RchiOBHm_Chr6g0292091 RchiOBHm_Chr6g0292271 RchiOBHm_Chr7g0221261
rosa_laevigata RLG00000002165 RLG00000007725 RLG00000012062 RLG00000012543 RLG00000013427 RLG00000021441 RLG00000021477 RLG00000021478 RLG00000021480 RLG00000021481
rosa_multiflora Rmu_co8220318.1_g000001 Rmu_co8427407.1_g000001 Rmu_sc0000946.1_g000006 Rmu_sc0000946.1_g000007 Rmu_sc0000946.1_g000010 Rmu_sc0000946.1_g000012 Rmu_sc0000946.1_g000013 Rmu_sc0002030.1_g000015 Rmu_sc0002870.1_g000002 Rmu_sc0003200.1_g000004 Rmu_sc0004915.1_g000002 Rmu_sc0004991.1_g000006 Rmu_sc0006928.1_g000020 Rmu_sc0007384.1_g000001 Rmu_sc0030722.1_g000001 Rmu_sc0030723.1_g000001 Rmu_ssc0000076.1_g000019 Rmu_ssc0000076.1_g000025 Rmu_ssc0000318.1_g000001
rosa_roxburghii Rroxscaffold_2G00086340 Rroxscaffold_2G00086360 Rroxscaffold_2G00086370 Rroxscaffold_2G00086380 Rroxscaffold_2G00086830 Rroxscaffold_2G00087380 Rroxscaffold_2G00120420 Rroxscaffold_7G00175260 Rroxscaffold_7G00175600 Rroxscaffold_7G00177970 Rroxscaffold_7G00192830
rosa_rugosa Rorug02G0247400 Rorug02G0506200 Rorug02G0508300 Rorug02G0509700 Rorug05G0378800 Rorug06G0096600 Rorug06G0096700 Rorug06G0221800
rosa_samantha Rh2AG577600 Rh2AG577700 Rh2AG577800 Rh2AG578000 Rh2AG578100 Rh2BG589200 Rh2CG559800 Rh2DG594400 Rh2DG594500 Rh2DG597800 Rh2DG599400 Rh2DG599500 Rh2DG599600 Rh6AG338400 Rh6BG211200 Rh6BG212600 Rh6BG342900 Rh6BG345600 Rh6CG214800 Rh6CG349100 Rh6CG350600 Rh6CG350700 Rh6CG352600 Rh7AG340800
rosa_wichuraiana Rw1G028590 Rw2G047980 Rw2G047990 Rw5G043360 Rw6G018180 Rw6G029200 Rw6G029450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 550
Acc36I ACCTGC 2 cut(s) 87, 1326
AccB7I CCANNNNNTGG 2 cut(s) 315, 603
AciI CCGC 5 cut(s) 27, 30, 352, 1130, 1457
AclI AACGTT 1 cut(s) 744
AclWI GGATC 2 cut(s) 132, 329
AcoI YGGCCR 3 cut(s) 349, 1412, 1433
AcsI RAATTY 3 cut(s) 281, 422, 753
AfaI GTAC 4 cut(s) 360, 648, 1085, 1316
AfiI CCNNNNNNNGG 9 cut(s) 125, 129, 241, 315, 603, 626, 643, 1064, 1324
AflII CTTAAG 1 cut(s) 62
AgsI TTSAA 8 cut(s) 23, 92, 254, 293, 472, 893, 973, 1162
AhlI ACTAGT 1 cut(s) 649
AjnI CCWGG 1 cut(s) 625
AluBI AGCT 7 cut(s) 6, 46, 454, 721, 1196, 1423, 1488
AluI AGCT 7 cut(s) 6, 46, 454, 721, 1196, 1423, 1488
Alw21I GWGCWC 2 cut(s) 8, 1425
Alw26I GTCTC 1 cut(s) 824
AlwI GGATC 2 cut(s) 132, 329
AoxI GGCC 3 cut(s) 349, 1412, 1433
ApeKI GCWGC 4 cut(s) 546, 1196, 1459, 1485
ApoI RAATTY 3 cut(s) 281, 422, 753
ArsI GACNNNNNNTTYG 2 cut(s) 1352, 1384
AseI ATTAAT 1 cut(s) 105
Asp700I GAANNNNTTC 1 cut(s) 74
AspA2I CCTAGG 1 cut(s) 1087
AspLEI GCGC 2 cut(s) 321, 551
AspS9I GGNCC 3 cut(s) 965, 1240, 1262
AsuHPI GGTGA 4 cut(s) 189, 848, 1022, 1415
AvaII GGWCC 3 cut(s) 965, 1240, 1262
AvrII CCTAGG 1 cut(s) 1087
BalI TGGCCA 1 cut(s) 1414
BanII GRGCYC 2 cut(s) 8, 1425
BbsI GAAGAC 1 cut(s) 217
Bbv12I GWGCWC 2 cut(s) 8, 1425
BbvI GCAGC 3 cut(s) 533, 1183, 1471
BccI CCATC 6 cut(s) 223, 280, 1007, 1177, 1253, 1322
BceAI ACGGC 1 cut(s) 258
BcgI CGANNNNNNTGC 2 cut(s) 1178, 1212
BciT130I CCWGG 1 cut(s) 627
BclI TGATCA 1 cut(s) 1024
BcoDI GTCTC 1 cut(s) 824
BcuI ACTAGT 1 cut(s) 649
BfaI CTAG 7 cut(s) 168, 650, 1088, 1371, 1449, 1482, 1489
BfrI CTTAAG 1 cut(s) 62
BfuAI ACCTGC 2 cut(s) 87, 1326
BglII AGATCT 1 cut(s) 816
BisI GCNGC 7 cut(s) 28, 352, 547, 1131, 1197, 1460, 1486
BlnI CCTAGG 1 cut(s) 1087
BlsI GCNGC 7 cut(s) 29, 353, 548, 1132, 1198, 1461, 1487
Bme1390I CCNGG 1 cut(s) 627
Bme18I GGWCC 3 cut(s) 965, 1240, 1262
BmgT120I GGNCC 3 cut(s) 965, 1240, 1262
BmiI GGNNCC 4 cut(s) 966, 967, 1056, 1242
BmrFI CCNGG 1 cut(s) 627
BmrI ACTGGG 2 cut(s) 136, 458
BmsI GCATC 1 cut(s) 623
BmuI ACTGGG 2 cut(s) 136, 458
BpiI GAAGAC 1 cut(s) 217
BplI GAGNNNNNCTC 2 cut(s) 806, 838
BpmI CTGGAG 1 cut(s) 1425
BsaAI YACGTR 1 cut(s) 1272
BsaBI GATNNNNATC 1 cut(s) 1176
BsaJI CCNNGG 6 cut(s) 367, 440, 625, 1087, 1427, 1468
BsaXI ACNNNNNCTCC 2 cut(s) 1092, 1122
Bsc4I CCNNNNNNNGG 9 cut(s) 125, 129, 241, 315, 603, 626, 643, 1064, 1324
Bse118I RCCGGY 1 cut(s) 297
Bse1I ACTGG 7 cut(s) 142, 464, 509, 838, 1391, 1415, 1442
Bse3DI GCAATG 2 cut(s) 592, 608
Bse8I GATNNNNATC 1 cut(s) 1176
BseBI CCWGG 1 cut(s) 627
BseDI CCNNGG 6 cut(s) 367, 440, 625, 1087, 1427, 1468
BseGI GGATG 7 cut(s) 446, 924, 1109, 1119, 1188, 1264, 1333
BseJI GATNNNNATC 1 cut(s) 1176
BseLI CCNNNNNNNGG 9 cut(s) 125, 129, 241, 315, 603, 626, 643, 1064, 1324
BseMI GCAATG 2 cut(s) 592, 608
BseMII CTCAG 4 cut(s) 345, 546, 720, 819
BseNI ACTGG 7 cut(s) 142, 464, 509, 838, 1391, 1415, 1442
BseRI GAGGAG 2 cut(s) 95, 1067
BseX3I CGGCCG 1 cut(s) 349
BseXI GCAGC 3 cut(s) 533, 1183, 1471
Bsh1285I CGRYCG 1 cut(s) 352
BshFI GGCC 3 cut(s) 351, 1414, 1435
BsiEI CGRYCG 1 cut(s) 352
BsiHKAI GWGCWC 2 cut(s) 8, 1425
BsiSI CCGG 1 cut(s) 298
BslFI GGGAC 1 cut(s) 951
BslI CCNNNNNNNGG 9 cut(s) 125, 129, 241, 315, 603, 626, 643, 1064, 1324
BsmAI GTCTC 1 cut(s) 824
BsmFI GGGAC 1 cut(s) 951
BsmI GAATGC 1 cut(s) 29
BsnI GGCC 3 cut(s) 351, 1414, 1435
Bsp1286I GDGCHC 2 cut(s) 8, 1425
Bsp1407I TGTACA 1 cut(s) 358
Bsp143I GATC 9 cut(s) 137, 182, 191, 229, 334, 816, 1024, 1171, 1177
Bsp19I CCATGG 3 cut(s) 440, 1427, 1468
BspACI CCGC 5 cut(s) 27, 30, 352, 1130, 1457
BspANI GGCC 3 cut(s) 351, 1414, 1435
BspCNI CTCAG 4 cut(s) 344, 547, 721, 820
BspHI TCATGA 1 cut(s) 1174
BspLI GGNNCC 4 cut(s) 966, 967, 1056, 1242
BspMI ACCTGC 2 cut(s) 87, 1326
BspPI GGATC 2 cut(s) 132, 329
BspQI GCTCTTC 1 cut(s) 618
BspTI CTTAAG 1 cut(s) 62
BsrDI GCAATG 2 cut(s) 592, 608
BsrFI RCCGGY 1 cut(s) 297
BsrGI TGTACA 1 cut(s) 358
BsrI ACTGG 7 cut(s) 142, 464, 509, 838, 1391, 1415, 1442
BssAI RCCGGY 1 cut(s) 297
BssECI CCNNGG 6 cut(s) 367, 440, 625, 1087, 1427, 1468
BssMI GATC 9 cut(s) 137, 182, 191, 229, 334, 816, 1024, 1171, 1177
BssT1I CCWWGG 5 cut(s) 367, 440, 1087, 1427, 1468
Bst2UI CCWGG 1 cut(s) 627
Bst4CI ACNGT 2 cut(s) 1045, 1386
Bst6I CTCTTC 2 cut(s) 618, 829
BstAFI CTTAAG 1 cut(s) 62
BstAUI TGTACA 1 cut(s) 358
BstBAI YACGTR 1 cut(s) 1272
BstC8I GCNNGC 3 cut(s) 1201, 1284, 1464
BstDEI CTNAG 7 cut(s) 9, 331, 535, 555, 687, 729, 828
BstDSI CCRYGG 3 cut(s) 440, 1427, 1468
BstENI CCTNNNNNAGG 1 cut(s) 123
BstF5I GGATG 7 cut(s) 446, 924, 1109, 1119, 1188, 1264, 1333
BstHHI GCGC 2 cut(s) 321, 551
BstKTI GATC 9 cut(s) 140, 185, 194, 232, 337, 819, 1027, 1174, 1180
BstMAI GTCTC 1 cut(s) 824
BstMBI GATC 9 cut(s) 137, 182, 191, 229, 334, 816, 1024, 1171, 1177
BstMCI CGRYCG 1 cut(s) 352
BstMWI GCNNNNNNNGC 1 cut(s) 1420
BstNI CCWGG 1 cut(s) 627
BstNSI RCATGY 1 cut(s) 1466
BstSCI CCNGG 1 cut(s) 625
BstV1I GCAGC 3 cut(s) 533, 1183, 1471
BstV2I GAAGAC 1 cut(s) 217
BstX2I RGATCY 3 cut(s) 137, 334, 816
BstYI RGATCY 3 cut(s) 137, 334, 816
BstZI CGGCCG 1 cut(s) 349
BsuRI GGCC 3 cut(s) 351, 1414, 1435
BtgI CCRYGG 3 cut(s) 440, 1427, 1468
BtsCI GGATG 7 cut(s) 446, 924, 1109, 1119, 1188, 1264, 1333
BtsIMutI CAGTG 2 cut(s) 471, 1041
BveI ACCTGC 2 cut(s) 87, 1326
Cac8I GCNNGC 3 cut(s) 1201, 1284, 1464
CciI TCATGA 1 cut(s) 1174
CfoI GCGC 2 cut(s) 321, 551
Cfr10I RCCGGY 1 cut(s) 297
Cfr13I GGNCC 3 cut(s) 965, 1240, 1262
Csp6I GTAC 4 cut(s) 359, 647, 1084, 1315
CviAII CATG 7 cut(s) 40, 441, 598, 1175, 1428, 1463, 1469
CviQI GTAC 4 cut(s) 359, 647, 1084, 1315
DdeI CTNAG 7 cut(s) 9, 331, 535, 555, 687, 729, 828
DpnI GATC 9 cut(s) 139, 184, 193, 231, 336, 818, 1026, 1173, 1179
DpnII GATC 9 cut(s) 137, 182, 191, 229, 334, 816, 1024, 1171, 1177
EaeI YGGCCR 3 cut(s) 349, 1412, 1433
EagI CGGCCG 1 cut(s) 349
Eam1104I CTCTTC 2 cut(s) 618, 829
EarI CTCTTC 2 cut(s) 618, 829
Ecl136II GAGCTC 2 cut(s) 6, 1423
EclXI CGGCCG 1 cut(s) 349
Eco130I CCWWGG 5 cut(s) 367, 440, 1087, 1427, 1468
Eco24I GRGCYC 2 cut(s) 8, 1425
Eco32I GATATC 1 cut(s) 898
Eco47I GGWCC 3 cut(s) 965, 1240, 1262
Eco52I CGGCCG 1 cut(s) 349
Eco53kI GAGCTC 2 cut(s) 6, 1423
EcoICRI GAGCTC 2 cut(s) 6, 1423
EcoNI CCTNNNNNAGG 1 cut(s) 123
EcoO109I RGGNCCY 1 cut(s) 965
EcoRI GAATTC 2 cut(s) 422, 753
EcoRII CCWGG 1 cut(s) 625
EcoRV GATATC 1 cut(s) 898
EcoT14I CCWWGG 5 cut(s) 367, 440, 1087, 1427, 1468
EcoT22I ATGCAT 1 cut(s) 592
EcoT38I GRGCYC 2 cut(s) 8, 1425
ErhI CCWWGG 5 cut(s) 367, 440, 1087, 1427, 1468
FaeI CATG 7 cut(s) 43, 444, 601, 1178, 1431, 1466, 1472
FalI AAGNNNNNCTT 2 cut(s) 933, 965
FaqI GGGAC 1 cut(s) 951
FatI CATG 7 cut(s) 39, 440, 597, 1174, 1427, 1462, 1468
FauI CCCGC 1 cut(s) 23
FbaI TGATCA 1 cut(s) 1024
Fnu4HI GCNGC 7 cut(s) 28, 352, 547, 1131, 1197, 1460, 1486
FokI GGATG 7 cut(s) 433, 931, 1116, 1126, 1195, 1271, 1340
FriOI GRGCYC 2 cut(s) 8, 1425
Fsp4HI GCNGC 7 cut(s) 28, 352, 547, 1131, 1197, 1460, 1486
FspBI CTAG 7 cut(s) 168, 650, 1088, 1371, 1449, 1482, 1489
FspI TGCGCA 1 cut(s) 550
GlaI GCGC 2 cut(s) 320, 550
GluI GCNGC 7 cut(s) 28, 352, 547, 1131, 1197, 1460, 1486
GsuI CTGGAG 1 cut(s) 1425
HaeIII GGCC 3 cut(s) 351, 1414, 1435
HapII CCGG 1 cut(s) 298
HhaI GCGC 2 cut(s) 321, 551
Hin1II CATG 7 cut(s) 43, 444, 601, 1178, 1431, 1466, 1472
Hin6I GCGC 2 cut(s) 319, 549
HinP1I GCGC 2 cut(s) 319, 549
HindIII AAGCTT 1 cut(s) 44
HinfI GANTC 5 cut(s) 657, 770, 794, 848, 1438
HpaII CCGG 1 cut(s) 298
HphI GGTGA 4 cut(s) 189, 848, 1022, 1415
Hpy188I TCNGA 6 cut(s) 10, 334, 387, 829, 1100, 1182
Hpy188III TCNNGA 4 cut(s) 54, 764, 1175, 1256
HpyAV CCTTC 3 cut(s) 123, 979, 1184
HpyCH4III ACNGT 2 cut(s) 1045, 1386
HpyCH4IV ACGT 5 cut(s) 524, 714, 744, 1069, 1271
HpyF10VI GCNNNNNNNGC 1 cut(s) 1420
HpyF3I CTNAG 7 cut(s) 9, 331, 535, 555, 687, 729, 828
HpySE526I ACGT 5 cut(s) 524, 714, 744, 1069, 1271
Hsp92II CATG 7 cut(s) 43, 444, 601, 1178, 1431, 1466, 1472
HspAI GCGC 2 cut(s) 319, 549
KflI GGGWCCC 1 cut(s) 965
Ksp22I TGATCA 1 cut(s) 1024
Kzo9I GATC 9 cut(s) 137, 182, 191, 229, 334, 816, 1024, 1171, 1177
LguI GCTCTTC 1 cut(s) 618
LmnI GCTCC 3 cut(s) 1054, 1193, 1428
Lsp1109I GCAGC 3 cut(s) 533, 1183, 1471
LweI GCATC 1 cut(s) 623
MaeI CTAG 7 cut(s) 168, 650, 1088, 1371, 1449, 1482, 1489
MaeII ACGT 5 cut(s) 524, 714, 744, 1069, 1271
MaeIII GTNAC 3 cut(s) 935, 1118, 1403
MalI GATC 9 cut(s) 139, 184, 193, 231, 336, 818, 1026, 1173, 1179
MboI GATC 9 cut(s) 137, 182, 191, 229, 334, 816, 1024, 1171, 1177
MboII GAAGA 8 cut(s) 222, 400, 605, 707, 811, 816, 905, 953
MfeI CAATTG 1 cut(s) 222
MflI RGATCY 3 cut(s) 137, 334, 816
MhlI GDGCHC 2 cut(s) 8, 1425
MlsI TGGCCA 1 cut(s) 1414
MluCI AATT 9 cut(s) 18, 74, 222, 281, 422, 571, 682, 753, 803
MluNI TGGCCA 1 cut(s) 1414
MlyI GAGTC 1 cut(s) 1432
Mox20I TGGCCA 1 cut(s) 1414
Mph1103I ATGCAT 1 cut(s) 592
MroXI GAANNNNTTC 1 cut(s) 74
MscI TGGCCA 1 cut(s) 1414
MseI TTAA 8 cut(s) 63, 105, 176, 723, 800, 806, 1125, 1214
MslI CAYNNNNRTG 2 cut(s) 1270, 1467
Msp20I TGGCCA 1 cut(s) 1414
MspCI CTTAAG 1 cut(s) 62
MspI CCGG 1 cut(s) 298
MspR9I CCNGG 1 cut(s) 627
MunI CAATTG 1 cut(s) 222
Mva1269I GAATGC 1 cut(s) 29
MvaI CCWGG 1 cut(s) 627
MwoI GCNNNNNNNGC 1 cut(s) 1420
NcoI CCATGG 3 cut(s) 440, 1427, 1468
NdeII GATC 9 cut(s) 137, 182, 191, 229, 334, 816, 1024, 1171, 1177
NlaIII CATG 7 cut(s) 43, 444, 601, 1178, 1431, 1466, 1472
NlaIV GGNNCC 4 cut(s) 966, 967, 1056, 1242
NmuCI GTSAC 3 cut(s) 935, 1118, 1403
NsbI TGCGCA 1 cut(s) 550
NsiI ATGCAT 1 cut(s) 592
NspI RCATGY 1 cut(s) 1466
PaeI GCATGC 1 cut(s) 1466
PagI TCATGA 1 cut(s) 1174
PciSI GCTCTTC 1 cut(s) 618
PctI GAATGC 1 cut(s) 29
PdmI GAANNNNTTC 1 cut(s) 74
PfeI GAWTC 4 cut(s) 657, 770, 794, 848
PflFI GACNNNGTC 1 cut(s) 1386
PflMI CCANNNNNTGG 2 cut(s) 315, 603
PkrI GCNGC 7 cut(s) 29, 353, 548, 1132, 1198, 1461, 1487
PleI GAGTC 1 cut(s) 1432
PpsI GAGTC 1 cut(s) 1432
Ppu21I YACGTR 1 cut(s) 1272
PpuMI RGGWCCY 1 cut(s) 965
PshBI ATTAAT 1 cut(s) 105
Psp124BI GAGCTC 2 cut(s) 8, 1425
Psp1406I AACGTT 1 cut(s) 744
Psp5II RGGWCCY 1 cut(s) 965
Psp6I CCWGG 1 cut(s) 625
PspGI CCWGG 1 cut(s) 625
PspN4I GGNNCC 4 cut(s) 966, 967, 1056, 1242
PspPI GGNCC 3 cut(s) 965, 1240, 1262
PspPPI RGGWCCY 1 cut(s) 965
PsuI RGATCY 3 cut(s) 137, 334, 816
PsyI GACNNNGTC 1 cut(s) 1386
RsaI GTAC 4 cut(s) 360, 648, 1085, 1316
RsaNI GTAC 4 cut(s) 359, 647, 1084, 1315
RseI CAYNNNNRTG 2 cut(s) 1270, 1467
SacI GAGCTC 2 cut(s) 8, 1425
SapI GCTCTTC 1 cut(s) 618
SaqAI TTAA 8 cut(s) 63, 105, 176, 723, 800, 806, 1125, 1214
SatI GCNGC 7 cut(s) 28, 352, 547, 1131, 1197, 1460, 1486
Sau3AI GATC 9 cut(s) 137, 182, 191, 229, 334, 816, 1024, 1171, 1177
Sau96I GGNCC 3 cut(s) 965, 1240, 1262
SchI GAGTC 1 cut(s) 1432
ScrFI CCNGG 1 cut(s) 627
SduI GDGCHC 2 cut(s) 8, 1425
SfaNI GCATC 1 cut(s) 623
SinI GGWCC 3 cut(s) 965, 1240, 1262
SmiMI CAYNNNNRTG 2 cut(s) 1270, 1467
SmlI CTYRAG 1 cut(s) 62
SmoI CTYRAG 1 cut(s) 62
SpeI ACTAGT 1 cut(s) 649
SphI GCATGC 1 cut(s) 1466
Sse9I AATT 9 cut(s) 18, 74, 222, 281, 422, 571, 682, 753, 803
SsiI CCGC 5 cut(s) 27, 30, 352, 1130, 1457
SspI AATATT 1 cut(s) 670
SspMI CTAG 7 cut(s) 168, 650, 1088, 1371, 1449, 1482, 1489
SstI GAGCTC 2 cut(s) 8, 1425
StyD4I CCNGG 1 cut(s) 625
StyI CCWWGG 5 cut(s) 367, 440, 1087, 1427, 1468
TaaI ACNGT 2 cut(s) 1045, 1386
TaiI ACGT 5 cut(s) 527, 717, 747, 1072, 1274
TaqI TCGA 3 cut(s) 78, 631, 1188
TasI AATT 9 cut(s) 18, 74, 222, 281, 422, 571, 682, 753, 803
TatI WGTACW 1 cut(s) 358
TauI GCSGC 3 cut(s) 30, 354, 1133
TfiI GAWTC 4 cut(s) 657, 770, 794, 848
Tru1I TTAA 8 cut(s) 63, 105, 176, 723, 800, 806, 1125, 1214
Tru9I TTAA 8 cut(s) 63, 105, 176, 723, 800, 806, 1125, 1214
TscAI CASTG 2 cut(s) 471, 1048
TseFI GTSAC 3 cut(s) 935, 1118, 1403
TseI GCWGC 4 cut(s) 546, 1196, 1459, 1485
Tsp45I GTSAC 3 cut(s) 935, 1118, 1403
TspDTI ATGAA 4 cut(s) 56, 649, 783, 1343
TspRI CASTG 2 cut(s) 471, 1048
Tth111I GACNNNGTC 1 cut(s) 1386
Van91I CCANNNNNTGG 2 cut(s) 315, 603
Vha464I CTTAAG 1 cut(s) 62
VpaK11BI GGWCC 3 cut(s) 965, 1240, 1262
VspI ATTAAT 1 cut(s) 105
XagI CCTNNNNNAGG 1 cut(s) 123
XapI RAATTY 3 cut(s) 281, 422, 753
XceI RCATGY 1 cut(s) 1466
XcmI CCANNNNNNNNNTGG 1 cut(s) 149
XmaJI CCTAGG 1 cut(s) 1087
XmnI GAANNNNTTC 1 cut(s) 74
XspI CTAG 7 cut(s) 168, 650, 1088, 1371, 1449, 1482, 1489
Zsp2I ATGCAT 1 cut(s) 592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.