FvH4_6g03380

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000216
Physical Location & Seq
Reverse (-)
1866077 .. 1867512
1436 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g03380.t1

Sequence Viewer

Length: 1281 bp
ATGGGAGATGTTACTACTAGCAAACGAAGCAAAGCTCTAAGCTCCGAGTCTGTTGCAGCACCAGAAGACCTGATCGATGAACTCCCGGAGTGTTTATTGGTAGACATCCTTTGTCGACTTCCTCGCAACACTGTTGTTCAATGCAAGCGTGTCTCCAAATCTTGGTTGACTCTGATCTCCAAACCTTGTTTCCATGCCCACTTTTTAAGTCTCCAAAAACACAATCCCCCTTTTGAAACTACGCTCATGTTTGTCCGTACCAGTGCACTTGAAATACAGTCCTTCACAATTCCACTGAAGCACACAAGGGTGTCGAATGTTCTCAAATTCAGTCACATATACAATGTTGTGGCTGGGACATGCAATGACCTAGTTTTGTGGTGCGCGACTCCGATGTTTCAGATCAGGTGCTATTACATCAGCAATCCATACACCAACCATTGTGTTCCTCTTCCTCTCGCTCCTCAATGCCACCAAGCCCATGTAGTCGTGGGGCTCATATGCGATTCCTACCATAGGTGCAAGGTTGTGCGAATTCTCGAATGTGAGGAAGAATCTGCATTATTCATGGTGGAGATCTTCTCTTCCGAAACCTCTGAATGGACACAAGCAGTAGTTCCATTCCCGCAAGGGCTTACATATGATGATATTAGAAGCAGTGTCAACAATGTAGGCCTTGCTTGCAACGGCACGTTGTACTGGTTAGTCTCCAGTGGCCTTGTTATTGGTTTAGACCCTTCCCAGTTTGACAACAGTTGCATACCTAGTGCTGCTACTGTTCCGGCAAACCATAACTTCCATTACAGTTTTATATCCAAGCCTGATGTAGATGCAGGCTTGTCTGCTTCTTCCTCATGCGAGCAGTGCCTCACTGTTTTCCGGGGGCGTCTGAGTCTATGCCAGTTTTATAATGAAGGACCTCCATCTCCTATTCTTTATGTGTGGGACTTGAAAGAAGATGATCATGAGATGGATGGAGTTGGAAGGAAAAGTGTGAAATGGTGTTTGAAAGAGAAGATTGTCCTGGACGAACTCATAGCGAGTTTGTATTGGAAGCCTCTGGCTTTCCACCCAAATGATGAAGATAAATTGTATGCACTGTGTTATTATCCTCGCAATAATGCTAAAAAATGTTTCATCTGCGAGTACAATATTCGAAAGTCAGGACGGTCTGCCATCCGGATATCAGAAATTCCATTGCAGAACCGTGTAGACGCTTTTCCACTGTTGATCCCAGGGGTGCGGTTGCCAACACCAGTTCCTGGACTAGTTCCTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

427

Amino Acids

47.93

Weight (kDa)

6.49

Isoelectric Point (pI)

47.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 25 - 65 2.2e-07 F-box domain
b-prop_At3g26010-like PF24750 116 - 365 1.7e-10 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000216)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38860 AT5G38860
fragaria_vesca FvH4_2g24261 FvH4_2g24270 FvH4_3g35490 FvH4_6g03181 FvH4_6g03182 FvH4_6g03221 FvH4_6g03380 FvH4_6g05203 FvH4_6g31981 FvH4_6g32061 FvH4_6g37041 FvH4_6g39371 FvH4_6g45291 FvH4_6g45890 FvH4_6g46240 FvH4_6g46241 FvH4_6g46242 FvH4_6g46260 FvH4_6g46280 FvH4_6g46280 FvH4_6g46280 FvH4_6g46290 FvH4_6g46290 FvH4_6g46380
malus_domestica MD02G1008700.v1.1 MD02G1008900.v1.1 MD04G1180900.v1.1 MD04G1181200.v1.1 MD09G1075900.v1.1 MD09G1201600.v1.1 MD15G1017800.v1.1 MD17G1066600.v1.1
prunus_persica Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G512600_v2.0.a1 Prupe.3G059500_v2.0.a1 Prupe.3G059600_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.6G076400_v2.0.a1
pyrus_communis pycom02g00750 pycom03g20320 pycom09g00330 pycom11g08760 pycom17g04880 pycom17g06710 pycom17g19130
rosa_chinensis RchiOBHm_Chr2g0123691 RchiOBHm_Chr2g0164671 RchiOBHm_Chr2g0164681 RchiOBHm_Chr2g0164721 RchiOBHm_Chr2g0164741 RchiOBHm_Chr6g0275871 RchiOBHm_Chr6g0276071 RchiOBHm_Chr6g0291931 RchiOBHm_Chr6g0292091 RchiOBHm_Chr6g0292271 RchiOBHm_Chr7g0221261
rosa_laevigata RLG00000002165 RLG00000007725 RLG00000012062 RLG00000012543 RLG00000013427 RLG00000021441 RLG00000021477 RLG00000021478 RLG00000021480 RLG00000021481
rosa_multiflora Rmu_co8220318.1_g000001 Rmu_co8427407.1_g000001 Rmu_sc0000946.1_g000006 Rmu_sc0000946.1_g000007 Rmu_sc0000946.1_g000010 Rmu_sc0000946.1_g000012 Rmu_sc0000946.1_g000013 Rmu_sc0002030.1_g000015 Rmu_sc0002870.1_g000002 Rmu_sc0003200.1_g000004 Rmu_sc0004915.1_g000002 Rmu_sc0004991.1_g000006 Rmu_sc0006928.1_g000020 Rmu_sc0007384.1_g000001 Rmu_sc0030722.1_g000001 Rmu_sc0030723.1_g000001 Rmu_ssc0000076.1_g000019 Rmu_ssc0000076.1_g000025 Rmu_ssc0000318.1_g000001
rosa_roxburghii Rroxscaffold_2G00086340 Rroxscaffold_2G00086360 Rroxscaffold_2G00086370 Rroxscaffold_2G00086380 Rroxscaffold_2G00086830 Rroxscaffold_2G00087380 Rroxscaffold_2G00120420 Rroxscaffold_7G00175260 Rroxscaffold_7G00175600 Rroxscaffold_7G00177970 Rroxscaffold_7G00192830
rosa_rugosa Rorug02G0247400 Rorug02G0506200 Rorug02G0508300 Rorug02G0509700 Rorug05G0378800 Rorug06G0096600 Rorug06G0096700 Rorug06G0221800
rosa_samantha Rh2AG577600 Rh2AG577700 Rh2AG577800 Rh2AG578000 Rh2AG578100 Rh2BG589200 Rh2CG559800 Rh2DG594400 Rh2DG594500 Rh2DG597800 Rh2DG599400 Rh2DG599500 Rh2DG599600 Rh6AG338400 Rh6BG211200 Rh6BG212600 Rh6BG342900 Rh6BG345600 Rh6CG214800 Rh6CG349100 Rh6CG350600 Rh6CG350700 Rh6CG352600 Rh7AG340800
rosa_wichuraiana Rw1G028590 Rw2G047980 Rw2G047990 Rw5G043360 Rw6G018180 Rw6G029200 Rw6G029450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 909
AccB7I CCANNNNNTGG 2 cut(s) 162, 1262
AccI GTMKAC 3 cut(s) 102, 115, 1212
AccII CGCG 1 cut(s) 386
AccIII TCCGGA 1 cut(s) 1179
AciI CCGC 2 cut(s) 626, 1243
AclWI GGATC 1 cut(s) 1225
AcsI RAATTY 3 cut(s) 326, 534, 1191
AcuI CTGAAG 1 cut(s) 317
AcyI GRCGYC 1 cut(s) 886
AfaI GTAC 3 cut(s) 259, 698, 1148
AfiI CCNNNNNNNGG 4 cut(s) 162, 516, 600, 1262
AgsI TTSAA 5 cut(s) 140, 236, 272, 952, 1009
AhlI ACTAGT 1 cut(s) 1267
AjnI CCWGG 3 cut(s) 1023, 1234, 1261
AjuI GAANNNNNNNTTGG 2 cut(s) 173, 205
AleI CACNNNNGTG 1 cut(s) 308
AluBI AGCT 2 cut(s) 35, 42
AluI AGCT 2 cut(s) 35, 42
Alw21I GWGCWC 1 cut(s) 268
Alw26I GTCTC 3 cut(s) 157, 215, 712
Alw44I GTGCAC 1 cut(s) 264
AlwI GGATC 1 cut(s) 1225
AlwNI CAGNNNCTG 1 cut(s) 1262
Aor13HI TCCGGA 1 cut(s) 1179
AoxI GGCC 2 cut(s) 673, 715
ApaLI GTGCAC 1 cut(s) 264
ApeKI GCWGC 2 cut(s) 56, 770
ApoI RAATTY 3 cut(s) 326, 534, 1191
AspLEI GCGC 1 cut(s) 386
AspS9I GGNCC 1 cut(s) 917
AsuC2I CCSGG 2 cut(s) 86, 881
AsuII TTCGAA 1 cut(s) 1156
AvaII GGWCC 1 cut(s) 917
BaeGI GKGCMC 1 cut(s) 268
BanII GRGCYC 1 cut(s) 498
BbsI GAAGAC 1 cut(s) 72
Bbv12I GWGCWC 1 cut(s) 268
BbvI GCAGC 2 cut(s) 68, 757
BccI CCATC 4 cut(s) 931, 964, 968, 1184
BceAI ACGGC 1 cut(s) 703
BcgI CGANNNNNNTGC 2 cut(s) 35, 69
BciT130I CCWGG 3 cut(s) 1025, 1236, 1263
BclI TGATCA 1 cut(s) 961
BcnI CCSGG 2 cut(s) 86, 881
BcoDI GTCTC 3 cut(s) 157, 215, 712
BcuI ACTAGT 1 cut(s) 1267
BfaI CTAG 4 cut(s) 18, 371, 765, 1268
BglII AGATCT 1 cut(s) 576
BisI GCNGC 2 cut(s) 57, 771
BlsI GCNGC 2 cut(s) 58, 772
Bme1390I CCNGG 5 cut(s) 86, 881, 1025, 1236, 1263
Bme18I GGWCC 1 cut(s) 917
BmgT120I GGNCC 1 cut(s) 917
BmrFI CCNGG 5 cut(s) 86, 881, 1025, 1236, 1263
BmrI ACTGGG 1 cut(s) 736
BmsI GCATC 1 cut(s) 820
BmuI ACTGGG 1 cut(s) 736
BpiI GAAGAC 1 cut(s) 72
BplI GAGNNNNNCTC 2 cut(s) 566, 598
BpmI CTGGAG 1 cut(s) 694
Bpu14I TTCGAA 1 cut(s) 1156
BpuMI CCSGG 2 cut(s) 86, 881
Bsa29I ATCGAT 1 cut(s) 75
BsaHI GRCGYC 1 cut(s) 886
BsaJI CCNNGG 3 cut(s) 880, 1234, 1235
BsaWI WCCGGW 1 cut(s) 1179
Bsc4I CCNNNNNNNGG 4 cut(s) 162, 516, 600, 1262
Bse1I ACTGG 6 cut(s) 261, 704, 711, 742, 901, 1256
Bse3DI GCAATG 2 cut(s) 370, 1196
BseAI TCCGGA 1 cut(s) 1179
BseBI CCWGG 3 cut(s) 1025, 1236, 1263
BseCI ATCGAT 1 cut(s) 75
BseDI CCNNGG 3 cut(s) 880, 1234, 1235
BseGI GGATG 3 cut(s) 105, 979, 1176
BseLI CCNNNNNNNGG 4 cut(s) 162, 516, 600, 1262
BseMI GCAATG 2 cut(s) 370, 1196
BseMII CTCAG 1 cut(s) 881
BseNI ACTGG 6 cut(s) 261, 704, 711, 742, 901, 1256
BseRI GAGGAG 1 cut(s) 453
BseSI GKGCMC 1 cut(s) 268
BseXI GCAGC 2 cut(s) 68, 757
BseYI CCCAGC 1 cut(s) 353
Bsh1236I CGCG 1 cut(s) 386
BshFI GGCC 2 cut(s) 675, 717
BshVI ATCGAT 1 cut(s) 75
BsiHKAI GWGCWC 1 cut(s) 268
BsiSI CCGG 4 cut(s) 86, 782, 880, 1180
BslFI GGGAC 2 cut(s) 370, 959
BslI CCNNNNNNNGG 4 cut(s) 162, 516, 600, 1262
BsmAI GTCTC 3 cut(s) 157, 215, 712
BsmFI GGGAC 2 cut(s) 370, 959
BsnI GGCC 2 cut(s) 675, 717
Bsp119I TTCGAA 1 cut(s) 1156
Bsp1286I GDGCHC 2 cut(s) 268, 498
Bsp13I TCCGGA 1 cut(s) 1179
Bsp143I GATC 6 cut(s) 72, 174, 402, 576, 961, 1230
BspACI CCGC 2 cut(s) 626, 1243
BspANI GGCC 2 cut(s) 675, 717
BspCNI CTCAG 1 cut(s) 882
BspDI ATCGAT 1 cut(s) 75
BspEI TCCGGA 1 cut(s) 1179
BspFNI CGCG 1 cut(s) 386
BspHI TCATGA 1 cut(s) 964
BspPI GGATC 1 cut(s) 1225
BspT104I TTCGAA 1 cut(s) 1156
BsrDI GCAATG 2 cut(s) 370, 1196
BsrI ACTGG 6 cut(s) 261, 704, 711, 742, 901, 1256
BssECI CCNNGG 3 cut(s) 880, 1234, 1235
BssMI GATC 6 cut(s) 72, 174, 402, 576, 961, 1230
BssNI GRCGYC 1 cut(s) 886
Bst2UI CCWGG 3 cut(s) 1025, 1236, 1263
Bst6I CTCTTC 2 cut(s) 456, 589
BstACI GRCGYC 1 cut(s) 886
BstBI TTCGAA 1 cut(s) 1156
BstC8I GCNNGC 4 cut(s) 146, 682, 835, 860
BstDEI CTNAG 2 cut(s) 38, 890
BstENI CCTNNNNNAGG 1 cut(s) 514
BstF5I GGATG 3 cut(s) 105, 979, 1176
BstFNI CGCG 1 cut(s) 386
BstHHI GCGC 1 cut(s) 386
BstKTI GATC 6 cut(s) 75, 177, 405, 579, 964, 1233
BstMAI GTCTC 3 cut(s) 157, 215, 712
BstMBI GATC 6 cut(s) 72, 174, 402, 576, 961, 1230
BstMWI GCNNNNNNNGC 3 cut(s) 27, 681, 864
BstNI CCWGG 3 cut(s) 1025, 1236, 1263
BstNSI RCATGY 1 cut(s) 363
BstSCI CCNGG 5 cut(s) 84, 879, 1023, 1234, 1261
BstSLI GKGCMC 1 cut(s) 268
BstUI CGCG 1 cut(s) 386
BstV1I GCAGC 2 cut(s) 68, 757
BstV2I GAAGAC 1 cut(s) 72
BstX2I RGATCY 1 cut(s) 576
BstYI RGATCY 1 cut(s) 576
Bsu15I ATCGAT 1 cut(s) 75
BsuRI GGCC 2 cut(s) 675, 717
BsuTUI ATCGAT 1 cut(s) 75
BtsCI GGATG 3 cut(s) 105, 979, 1176
BtsI GCAGTG 2 cut(s) 664, 869
BtsIMutI CAGTG 9 cut(s) 129, 268, 293, 664, 718, 869, 870, 1097, 1223
Cac8I GCNNGC 4 cut(s) 146, 682, 835, 860
CaiI CAGNNNCTG 1 cut(s) 1262
CciI TCATGA 1 cut(s) 964
CfoI GCGC 1 cut(s) 386
Cfr13I GGNCC 1 cut(s) 917
ClaI ATCGAT 1 cut(s) 75
CseI GACGC 2 cut(s) 875, 1223
Csp6I GTAC 3 cut(s) 258, 697, 1147
CviAII CATG 7 cut(s) 194, 247, 360, 482, 568, 855, 965
CviQI GTAC 3 cut(s) 258, 697, 1147
DdeI CTNAG 2 cut(s) 38, 890
DpnI GATC 6 cut(s) 74, 176, 404, 578, 963, 1232
DpnII GATC 6 cut(s) 72, 174, 402, 576, 961, 1230
Eam1104I CTCTTC 2 cut(s) 456, 589
EarI CTCTTC 2 cut(s) 456, 589
Eco147I AGGCCT 1 cut(s) 675
Eco24I GRGCYC 1 cut(s) 498
Eco32I GATATC 1 cut(s) 1185
Eco47I GGWCC 1 cut(s) 917
Eco57I CTGAAG 1 cut(s) 317
EcoNI CCTNNNNNAGG 1 cut(s) 514
EcoO109I RGGNCCY 1 cut(s) 917
EcoRI GAATTC 1 cut(s) 534
EcoRII CCWGG 3 cut(s) 1023, 1234, 1261
EcoRV GATATC 1 cut(s) 1185
EcoT38I GRGCYC 1 cut(s) 498
FaeI CATG 7 cut(s) 197, 250, 363, 485, 571, 858, 968
FaqI GGGAC 2 cut(s) 370, 959
FatI CATG 7 cut(s) 193, 246, 359, 481, 567, 854, 964
FauI CCCGC 1 cut(s) 633
FauNDI CATATG 2 cut(s) 500, 640
FbaI TGATCA 1 cut(s) 961
FblI GTMKAC 3 cut(s) 102, 115, 1212
Fnu4HI GCNGC 2 cut(s) 57, 771
FokI GGATG 3 cut(s) 92, 986, 1163
FriOI GRGCYC 1 cut(s) 498
Fsp4HI GCNGC 2 cut(s) 57, 771
FspBI CTAG 4 cut(s) 18, 371, 765, 1268
GlaI GCGC 1 cut(s) 385
GluI GCNGC 2 cut(s) 57, 771
GsaI CCCAGC 1 cut(s) 357
GsuI CTGGAG 1 cut(s) 694
HaeIII GGCC 2 cut(s) 675, 717
HapII CCGG 4 cut(s) 86, 782, 880, 1180
HgaI GACGC 2 cut(s) 875, 1223
HhaI GCGC 1 cut(s) 386
Hin1I GRCGYC 1 cut(s) 886
Hin1II CATG 7 cut(s) 197, 250, 363, 485, 571, 858, 968
Hin6I GCGC 1 cut(s) 384
HinP1I GCGC 1 cut(s) 384
HincII GTYRAC 3 cut(s) 116, 168, 664
HindII GTYRAC 3 cut(s) 116, 168, 664
HinfI GANTC 6 cut(s) 47, 169, 388, 506, 554, 892
HpaII CCGG 4 cut(s) 86, 782, 880, 1180
Hpy166II GTNNAC 6 cut(s) 103, 116, 168, 266, 664, 1213
Hpy188I TCNGA 8 cut(s) 46, 174, 393, 402, 589, 598, 891, 1189
Hpy188III TCNNGA 4 cut(s) 539, 965, 1164, 1180
Hpy8I GTNNAC 6 cut(s) 103, 116, 168, 266, 664, 1213
HpyAV CCTTC 4 cut(s) 292, 747, 908, 978
HpyCH4IV ACGT 1 cut(s) 692
HpyF10VI GCNNNNNNNGC 3 cut(s) 27, 681, 864
HpyF3I CTNAG 2 cut(s) 38, 890
HpySE526I ACGT 1 cut(s) 692
Hsp92I GRCGYC 1 cut(s) 886
Hsp92II CATG 7 cut(s) 197, 250, 363, 485, 571, 858, 968
HspAI GCGC 1 cut(s) 384
Kpn2I TCCGGA 1 cut(s) 1179
Ksp22I TGATCA 1 cut(s) 961
Kzo9I GATC 6 cut(s) 72, 174, 402, 576, 961, 1230
LmnI GCTCC 2 cut(s) 47, 466
Lsp1109I GCAGC 2 cut(s) 68, 757
LweI GCATC 1 cut(s) 820
MaeI CTAG 4 cut(s) 18, 371, 765, 1268
MaeII ACGT 1 cut(s) 692
MaeIII GTNAC 2 cut(s) 10, 332
MalI GATC 6 cut(s) 74, 176, 404, 578, 963, 1232
MboI GATC 6 cut(s) 72, 174, 402, 576, 961, 1230
MboII GAAGA 9 cut(s) 77, 443, 563, 571, 576, 840, 968, 1027, 1094
MflI RGATCY 1 cut(s) 576
MhlI GDGCHC 2 cut(s) 268, 498
MluCI AATT 5 cut(s) 288, 326, 534, 1088, 1191
MlyI GAGTC 4 cut(s) 56, 163, 382, 901
MmeI TCCRAC 1 cut(s) 961
MroI TCCGGA 1 cut(s) 1179
MseI TTAA 1 cut(s) 206
MslI CAYNNNNRTG 2 cut(s) 308, 1074
MspI CCGG 4 cut(s) 86, 782, 880, 1180
MspR9I CCNGG 5 cut(s) 86, 881, 1025, 1236, 1263
MvaI CCWGG 3 cut(s) 1025, 1236, 1263
MvnI CGCG 1 cut(s) 386
MwoI GCNNNNNNNGC 3 cut(s) 27, 681, 864
NciI CCSGG 2 cut(s) 86, 881
NdeI CATATG 2 cut(s) 500, 640
NdeII GATC 6 cut(s) 72, 174, 402, 576, 961, 1230
NlaIII CATG 7 cut(s) 197, 250, 363, 485, 571, 858, 968
NmuCI GTSAC 1 cut(s) 332
NspI RCATGY 1 cut(s) 363
NspV TTCGAA 1 cut(s) 1156
OliI CACNNNNGTG 1 cut(s) 308
PagI TCATGA 1 cut(s) 964
PasI CCCWGGG 1 cut(s) 1235
PceI AGGCCT 1 cut(s) 675
PfeI GAWTC 2 cut(s) 506, 554
PflMI CCANNNNNTGG 2 cut(s) 162, 1262
PfoI TCCNGGA 3 cut(s) 84, 1023, 1261
PkrI GCNGC 2 cut(s) 58, 772
PleI GAGTC 4 cut(s) 55, 163, 382, 900
PpsI GAGTC 4 cut(s) 55, 163, 382, 900
PpuMI RGGWCCY 1 cut(s) 917
PsiI TTATAA 1 cut(s) 909
Psp5II RGGWCCY 1 cut(s) 917
Psp6I CCWGG 3 cut(s) 1023, 1234, 1261
PspFI CCCAGC 1 cut(s) 353
PspGI CCWGG 3 cut(s) 1023, 1234, 1261
PspPI GGNCC 1 cut(s) 917
PspPPI RGGWCCY 1 cut(s) 917
PstNI CAGNNNCTG 1 cut(s) 1262
PsuI RGATCY 1 cut(s) 576
RsaI GTAC 3 cut(s) 259, 698, 1148
RsaNI GTAC 3 cut(s) 258, 697, 1147
RseI CAYNNNNRTG 2 cut(s) 308, 1074
SalI GTCGAC 1 cut(s) 114
SaqAI TTAA 1 cut(s) 206
SatI GCNGC 2 cut(s) 57, 771
Sau3AI GATC 6 cut(s) 72, 174, 402, 576, 961, 1230
Sau96I GGNCC 1 cut(s) 917
SchI GAGTC 4 cut(s) 56, 163, 382, 901
ScrFI CCNGG 5 cut(s) 86, 881, 1025, 1236, 1263
SduI GDGCHC 2 cut(s) 268, 498
SfaNI GCATC 1 cut(s) 820
SfuI TTCGAA 1 cut(s) 1156
SinI GGWCC 1 cut(s) 917
SmiMI CAYNNNNRTG 2 cut(s) 308, 1074
SpeI ACTAGT 1 cut(s) 1267
Sse9I AATT 5 cut(s) 288, 326, 534, 1088, 1191
SseBI AGGCCT 1 cut(s) 675
SsiI CCGC 2 cut(s) 626, 1243
SspI AATATT 1 cut(s) 1153
SspMI CTAG 4 cut(s) 18, 371, 765, 1268
StuI AGGCCT 1 cut(s) 675
StyD4I CCNGG 5 cut(s) 84, 879, 1023, 1234, 1261
TaiI ACGT 1 cut(s) 695
TaqI TCGA 5 cut(s) 75, 115, 314, 540, 1156
TasI AATT 5 cut(s) 288, 326, 534, 1088, 1191
TatI WGTACW 2 cut(s) 696, 1146
TfiI GAWTC 2 cut(s) 506, 554
Tru1I TTAA 1 cut(s) 206
Tru9I TTAA 1 cut(s) 206
TscAI CASTG 9 cut(s) 136, 268, 300, 664, 718, 869, 877, 1104, 1230
TseFI GTSAC 1 cut(s) 332
TseI GCWGC 2 cut(s) 56, 770
Tsp45I GTSAC 1 cut(s) 332
TspDTI ATGAA 5 cut(s) 93, 556, 927, 1095, 1126
TspGWI ACGGA 1 cut(s) 245
TspRI CASTG 9 cut(s) 136, 268, 300, 664, 718, 869, 877, 1104, 1230
Van91I CCANNNNNTGG 2 cut(s) 162, 1262
VneI GTGCAC 1 cut(s) 264
VpaK11BI GGWCC 1 cut(s) 917
XagI CCTNNNNNAGG 1 cut(s) 514
XapI RAATTY 3 cut(s) 326, 534, 1191
XceI RCATGY 1 cut(s) 363
XmiI GTMKAC 3 cut(s) 102, 115, 1212
XspI CTAG 4 cut(s) 18, 371, 765, 1268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.