RLG00000002165

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000216
Physical Location & Seq
Forward (+)
26615277 .. 26616659
1383 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002165

Sequence Viewer

Length: 1383 bp
ATGAGCGGTGGTGGTGATAATTTTCCTGCTGCTTCAAGAAGAACTTTCTTTCGAGCTCTGAATGGTACTACTAGTATTGATAATCTCCCCGATGAGGTATTGATTGAAATCCTTTGTCGAGTTCCTGGCTACAAGTTCGTTTCTAAAAGCAAGTTTGTGTCCAAGCGCTGGTGCACTCTCACATCCAATCCTCACTTTATTCGCCGGTTTCTAAGTCTCCAAAGTGATCGTAAGACAAACCGTACCCTGATAAACAGAAGTGGAGAAGAATTCCTTAATAGAATGTCTTCATCCTCTCAGCCGCTAAGTCCGTTGTTCAAAAGAATCATGAGTTTCCATGGTCTGAAAGAAGAGCCGGTCGTGGAAGGTACATATAATGACCTAGTTTTGGGCTGCGCAAGCAAATATGATCAACGTGATTACTACATCTGCAATCCATACACAACGCAATGGCTTCCTCTTCCTCCCCCACCTCAACTAGTCCATTATGCGCCAGTGGGATTTACCTGCGATCTTCCCTATTATAACTGCAACAAAGACGGTGACGGTGAGGTCCAGCTTAATGCCGAGTATCGGTGTATTGTAGTGAGATTGATCTTGCCTTGTGGTCAGCGATTTTCATGCAAATTCAAAGTGCAGATATTCTCTTCCGAGACGGGTGAATGGAAAGAGTCAATTGTATCATCCCCATCGCCTGTTGGTGTTGAGCTTTCTATCGATCGTAATGTAATATCACCGTTCGCTTACAAGGGAATGCTATTTTGGGGTGATTTTGGTTGTGAACGCCGTTTTCTTATTGGATTGGATCCCTTCATGATCAACAGCACTATTAGTACTAATGGTGGTGATACAATTGATCACTATAAATGCCATTTTATAGAATTCAGACATGACTTTTCTCCCCTAGTGAGGTGCCTGGGTGAGTGCAGAGGTTGTTTGCGCATGGGCAGCCCCAATAGTGATGGTCTTTTTACTTTTCACGATTTGACTGAAGAAGAAACGCATGGTGCACCACCTGCAATTGTGAAATATTTGAAATTGGAAACTATAAAGAAATTTCACTTCATGACCACTGCAATGTATCATGGGCATTACTGTTATTTTCAGGTGCTGGCTATTGATCCGAATAATGAAGATATCTTGTATGTCCAAAAACTTGAAGGTGAATTAGATGGCAAGCAAGACGGAGACATTTTCAGGTGCAACATTACTACAAATGGGTACTCCAGGATAAATTGCTTCCCGATAGATGAAAAGCATCGAATTGAGTTGTCGTATGTCCACTTCCCACTTGTTGTGCCATGGTGGCCGACACCACTTCCTAGACTACCACAACACATGCGCGCAGCCCACCTGAATCCTCAATCTTCATGGAACCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

461

Amino Acids

52.72

Weight (kDa)

7.19

Isoelectric Point (pI)

56.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
b-prop_At3g26010-like PF24750 126 - 258 5.4e-07 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000216)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38860 AT5G38860
fragaria_vesca FvH4_2g24261 FvH4_2g24270 FvH4_3g35490 FvH4_6g03181 FvH4_6g03182 FvH4_6g03221 FvH4_6g03380 FvH4_6g05203 FvH4_6g31981 FvH4_6g32061 FvH4_6g37041 FvH4_6g39371 FvH4_6g45291 FvH4_6g45890 FvH4_6g46240 FvH4_6g46241 FvH4_6g46242 FvH4_6g46260 FvH4_6g46280 FvH4_6g46280 FvH4_6g46280 FvH4_6g46290 FvH4_6g46290 FvH4_6g46380
malus_domestica MD02G1008700.v1.1 MD02G1008900.v1.1 MD04G1180900.v1.1 MD04G1181200.v1.1 MD09G1075900.v1.1 MD09G1201600.v1.1 MD15G1017800.v1.1 MD17G1066600.v1.1
prunus_persica Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G512600_v2.0.a1 Prupe.3G059500_v2.0.a1 Prupe.3G059600_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.6G076400_v2.0.a1
pyrus_communis pycom02g00750 pycom03g20320 pycom09g00330 pycom11g08760 pycom17g04880 pycom17g06710 pycom17g19130
rosa_chinensis RchiOBHm_Chr2g0123691 RchiOBHm_Chr2g0164671 RchiOBHm_Chr2g0164681 RchiOBHm_Chr2g0164721 RchiOBHm_Chr2g0164741 RchiOBHm_Chr6g0275871 RchiOBHm_Chr6g0276071 RchiOBHm_Chr6g0291931 RchiOBHm_Chr6g0292091 RchiOBHm_Chr6g0292271 RchiOBHm_Chr7g0221261
rosa_laevigata RLG00000002165 RLG00000007725 RLG00000012062 RLG00000012543 RLG00000013427 RLG00000021441 RLG00000021477 RLG00000021478 RLG00000021480 RLG00000021481
rosa_multiflora Rmu_co8220318.1_g000001 Rmu_co8427407.1_g000001 Rmu_sc0000946.1_g000006 Rmu_sc0000946.1_g000007 Rmu_sc0000946.1_g000010 Rmu_sc0000946.1_g000012 Rmu_sc0000946.1_g000013 Rmu_sc0002030.1_g000015 Rmu_sc0002870.1_g000002 Rmu_sc0003200.1_g000004 Rmu_sc0004915.1_g000002 Rmu_sc0004991.1_g000006 Rmu_sc0006928.1_g000020 Rmu_sc0007384.1_g000001 Rmu_sc0030722.1_g000001 Rmu_sc0030723.1_g000001 Rmu_ssc0000076.1_g000019 Rmu_ssc0000076.1_g000025 Rmu_ssc0000318.1_g000001
rosa_roxburghii Rroxscaffold_2G00086340 Rroxscaffold_2G00086360 Rroxscaffold_2G00086370 Rroxscaffold_2G00086380 Rroxscaffold_2G00086830 Rroxscaffold_2G00087380 Rroxscaffold_2G00120420 Rroxscaffold_7G00175260 Rroxscaffold_7G00175600 Rroxscaffold_7G00177970 Rroxscaffold_7G00192830
rosa_rugosa Rorug02G0247400 Rorug02G0506200 Rorug02G0508300 Rorug02G0509700 Rorug05G0378800 Rorug06G0096600 Rorug06G0096700 Rorug06G0221800
rosa_samantha Rh2AG577600 Rh2AG577700 Rh2AG577800 Rh2AG578000 Rh2AG578100 Rh2BG589200 Rh2CG559800 Rh2DG594400 Rh2DG594500 Rh2DG597800 Rh2DG599400 Rh2DG599500 Rh2DG599600 Rh6AG338400 Rh6BG211200 Rh6BG212600 Rh6BG342900 Rh6BG345600 Rh6CG214800 Rh6CG349100 Rh6CG350600 Rh6CG350700 Rh6CG352600 Rh7AG340800
rosa_wichuraiana Rw1G028590 Rw2G047980 Rw2G047990 Rw5G043360 Rw6G018180 Rw6G029200 Rw6G029450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 525
AarI CACCTGC 1 cut(s) 1024
AasI GACNNNNNNGTC 1 cut(s) 551
Acc16I TGCGCA 2 cut(s) 397, 941
Acc36I ACCTGC 2 cut(s) 515, 1024
AccB1I GGYRCC 1 cut(s) 912
AccB7I CCANNNNNTGG 1 cut(s) 168
AccBSI CCGCTC 1 cut(s) 6
AccII CGCG 1 cut(s) 1344
AciI CCGC 2 cut(s) 6, 302
AclWI GGATC 3 cut(s) 800, 813, 1115
AcoI YGGCCR 1 cut(s) 1307
AcsI RAATTY 4 cut(s) 269, 626, 881, 1055
AcuI CTGAAG 1 cut(s) 1011
AfaI GTAC 5 cut(s) 67, 244, 370, 835, 1223
AfeI AGCGCT 1 cut(s) 167
AfiI CCNNNNNNNGG 5 cut(s) 94, 168, 388, 573, 909
AgsI TTSAA 6 cut(s) 36, 107, 319, 631, 1036, 1160
AhlI ACTAGT 2 cut(s) 71, 478
AjnI CCWGG 3 cut(s) 124, 915, 1226
AjuI GAANNNNNNNTTGG 2 cut(s) 745, 777
AluBI AGCT 3 cut(s) 56, 559, 709
AluI AGCT 3 cut(s) 56, 559, 709
Alw21I GWGCWC 3 cut(s) 58, 176, 1012
Alw26I GTCTC 3 cut(s) 221, 647, 1182
Alw44I GTGCAC 2 cut(s) 172, 1008
AlwI GGATC 3 cut(s) 800, 813, 1115
AlwNI CAGNNNCTG 1 cut(s) 1111
Aor51HI AGCGCT 1 cut(s) 167
AoxI GGCC 1 cut(s) 1307
ApaLI GTGCAC 2 cut(s) 172, 1008
ApeKI GCWGC 4 cut(s) 29, 393, 948, 1346
ApoI RAATTY 4 cut(s) 269, 626, 881, 1055
Asp700I GAANNNNTTC 1 cut(s) 286
AspLEI GCGC 6 cut(s) 168, 398, 493, 942, 1344, 1346
AspS9I GGNCC 1 cut(s) 553
AsuHPI GGTGA 9 cut(s) 26, 554, 560, 671, 726, 779, 857, 932, 1175
AvaII GGWCC 1 cut(s) 553
BaeGI GKGCMC 2 cut(s) 176, 1012
BamHI GGATCC 1 cut(s) 805
BanI GGYRCC 1 cut(s) 912
BanII GRGCYC 1 cut(s) 58
BarI GAAGNNNNNNTAC 2 cut(s) 1268, 1300
BbsI GAAGAC 1 cut(s) 279
Bbv12I GWGCWC 3 cut(s) 58, 176, 1012
BbvI GCAGC 4 cut(s) 16, 380, 960, 1358
BccI CCATC 3 cut(s) 697, 956, 1166
BceAI ACGGC 1 cut(s) 771
BcgI CGANNNNNNTGC 2 cut(s) 603, 637
BciT130I CCWGG 3 cut(s) 126, 917, 1228
BclI TGATCA 3 cut(s) 409, 816, 856
BcoDI GTCTC 3 cut(s) 221, 647, 1182
BcuI ACTAGT 2 cut(s) 71, 478
BfaI CTAG 5 cut(s) 72, 383, 479, 905, 1323
BfoI RGCGCY 1 cut(s) 169
BfuAI ACCTGC 2 cut(s) 515, 1024
BglI GCCNNNNNGGC 1 cut(s) 1306
BisI GCNGC 5 cut(s) 30, 302, 394, 949, 1347
BlsI GCNGC 5 cut(s) 31, 303, 395, 950, 1348
BmcAI AGTACT 1 cut(s) 835
Bme1390I CCNGG 3 cut(s) 126, 917, 1228
Bme18I GGWCC 1 cut(s) 553
BmgT120I GGNCC 1 cut(s) 553
BmiI GGNNCC 3 cut(s) 807, 914, 1376
BmrFI CCNGG 3 cut(s) 126, 917, 1228
BmsI GCATC 1 cut(s) 1267
BpiI GAAGAC 1 cut(s) 279
BpmI CTGGAG 1 cut(s) 1210
Bsa29I ATCGAT 1 cut(s) 717
BsaBI GATNNNNATC 1 cut(s) 107
BsaJI CCNNGG 3 cut(s) 337, 916, 1301
Bsc4I CCNNNNNNNGG 5 cut(s) 94, 168, 388, 573, 909
Bse118I RCCGGY 2 cut(s) 204, 355
Bse1I ACTGG 1 cut(s) 494
Bse3DI GCAATG 2 cut(s) 455, 1083
Bse8I GATNNNNATC 1 cut(s) 107
BseBI CCWGG 3 cut(s) 126, 917, 1228
BseCI ATCGAT 1 cut(s) 717
BseDI CCNNGG 3 cut(s) 337, 916, 1301
BseGI GGATG 3 cut(s) 182, 290, 683
BseJI GATNNNNATC 1 cut(s) 107
BseLI CCNNNNNNNGG 5 cut(s) 94, 168, 388, 573, 909
BseMI GCAATG 2 cut(s) 455, 1083
BseMII CTCAG 1 cut(s) 311
BseNI ACTGG 1 cut(s) 494
BsePI GCGCGC 1 cut(s) 1342
BseSI GKGCMC 2 cut(s) 176, 1012
BseXI GCAGC 4 cut(s) 16, 380, 960, 1358
BsgI GTGCAG 2 cut(s) 656, 946
Bsh1236I CGCG 1 cut(s) 1344
Bsh1285I CGRYCG 2 cut(s) 360, 721
BshFI GGCC 1 cut(s) 1309
BshNI GGYRCC 1 cut(s) 912
BshVI ATCGAT 1 cut(s) 717
BsiEI CGRYCG 2 cut(s) 360, 721
BsiHKAI GWGCWC 3 cut(s) 58, 176, 1012
BsiSI CCGG 2 cut(s) 205, 356
BslI CCNNNNNNNGG 5 cut(s) 94, 168, 388, 573, 909
BsmAI GTCTC 3 cut(s) 221, 647, 1182
BsmBI CGTCTC 1 cut(s) 647
BsmI GAATGC 1 cut(s) 759
BsnI GGCC 1 cut(s) 1309
Bsp1286I GDGCHC 3 cut(s) 58, 176, 1012
Bsp143I GATC 9 cut(s) 226, 409, 511, 594, 718, 805, 816, 856, 1120
Bsp19I CCATGG 2 cut(s) 337, 1301
BspACI CCGC 2 cut(s) 6, 302
BspANI GGCC 1 cut(s) 1309
BspCNI CTCAG 1 cut(s) 310
BspDI ATCGAT 1 cut(s) 717
BspFNI CGCG 1 cut(s) 1344
BspHI TCATGA 3 cut(s) 327, 813, 1065
BspLI GGNNCC 3 cut(s) 807, 914, 1376
BspMI ACCTGC 2 cut(s) 515, 1024
BspPI GGATC 3 cut(s) 800, 813, 1115
BspQI GCTCTTC 1 cut(s) 345
BspT107I GGYRCC 1 cut(s) 912
BsrBI CCGCTC 1 cut(s) 6
BsrDI GCAATG 2 cut(s) 455, 1083
BsrFI RCCGGY 2 cut(s) 204, 355
BsrI ACTGG 1 cut(s) 494
BssAI RCCGGY 2 cut(s) 204, 355
BssECI CCNNGG 3 cut(s) 337, 916, 1301
BssHII GCGCGC 1 cut(s) 1342
BssMI GATC 9 cut(s) 226, 409, 511, 594, 718, 805, 816, 856, 1120
BssT1I CCWWGG 2 cut(s) 337, 1301
Bst2UI CCWGG 3 cut(s) 126, 917, 1228
Bst4CI ACNGT 5 cut(s) 242, 542, 548, 738, 1097
Bst6I CTCTTC 3 cut(s) 345, 465, 652
BstAPI GCANNNNNTGC 1 cut(s) 1016
BstC8I GCNNGC 4 cut(s) 400, 1113, 1178, 1344
BstDEI CTNAG 3 cut(s) 212, 297, 305
BstDSI CCRYGG 2 cut(s) 337, 1301
BstF5I GGATG 3 cut(s) 182, 290, 683
BstFNI CGCG 1 cut(s) 1344
BstH2I RGCGCY 1 cut(s) 169
BstHHI GCGC 6 cut(s) 168, 398, 493, 942, 1344, 1346
BstKTI GATC 9 cut(s) 229, 412, 514, 597, 721, 808, 819, 859, 1123
BstMAI GTCTC 3 cut(s) 221, 647, 1182
BstMBI GATC 9 cut(s) 226, 409, 511, 594, 718, 805, 816, 856, 1120
BstMCI CGRYCG 2 cut(s) 360, 721
BstMWI GCNNNNNNNGC 4 cut(s) 399, 948, 1016, 1306
BstNI CCWGG 3 cut(s) 126, 917, 1228
BstNSI RCATGY 1 cut(s) 1342
BstSCI CCNGG 3 cut(s) 124, 915, 1226
BstSLI GKGCMC 2 cut(s) 176, 1012
BstUI CGCG 1 cut(s) 1344
BstV1I GCAGC 4 cut(s) 16, 380, 960, 1358
BstV2I GAAGAC 1 cut(s) 279
BstX2I RGATCY 1 cut(s) 805
BstYI RGATCY 1 cut(s) 805
Bsu15I ATCGAT 1 cut(s) 717
BsuRI GGCC 1 cut(s) 1309
BsuTUI ATCGAT 1 cut(s) 717
BtgI CCRYGG 2 cut(s) 337, 1301
BtgZI GCGATG 1 cut(s) 675
BtsCI GGATG 3 cut(s) 182, 290, 683
BtsI GCAGTG 1 cut(s) 1071
BtsIMutI CAGTG 2 cut(s) 501, 1071
BveI ACCTGC 2 cut(s) 515, 1024
Cac8I GCNNGC 4 cut(s) 400, 1113, 1178, 1344
CaiI CAGNNNCTG 1 cut(s) 1111
CciI TCATGA 3 cut(s) 327, 813, 1065
CfoI GCGC 6 cut(s) 168, 398, 493, 942, 1344, 1346
Cfr10I RCCGGY 2 cut(s) 204, 355
Cfr13I GGNCC 1 cut(s) 553
ClaI ATCGAT 1 cut(s) 717
Csp6I GTAC 5 cut(s) 66, 243, 369, 834, 1222
CviQI GTAC 5 cut(s) 66, 243, 369, 834, 1222
DdeI CTNAG 3 cut(s) 212, 297, 305
DpnI GATC 9 cut(s) 228, 411, 513, 596, 720, 807, 818, 858, 1122
DpnII GATC 9 cut(s) 226, 409, 511, 594, 718, 805, 816, 856, 1120
DrdI GACNNNNNNGTC 1 cut(s) 551
DseDI GACNNNNNNGTC 1 cut(s) 551
EaeI YGGCCR 1 cut(s) 1307
Eam1104I CTCTTC 3 cut(s) 345, 465, 652
EarI CTCTTC 3 cut(s) 345, 465, 652
Ecl136II GAGCTC 1 cut(s) 56
Eco130I CCWWGG 2 cut(s) 337, 1301
Eco24I GRGCYC 1 cut(s) 58
Eco32I GATATC 1 cut(s) 1138
Eco47I GGWCC 1 cut(s) 553
Eco47III AGCGCT 1 cut(s) 167
Eco53kI GAGCTC 1 cut(s) 56
Eco57I CTGAAG 1 cut(s) 1011
EcoICRI GAGCTC 1 cut(s) 56
EcoRI GAATTC 2 cut(s) 269, 881
EcoRII CCWGG 3 cut(s) 124, 915, 1226
EcoRV GATATC 1 cut(s) 1138
EcoT14I CCWWGG 2 cut(s) 337, 1301
EcoT38I GRGCYC 1 cut(s) 58
ErhI CCWWGG 2 cut(s) 337, 1301
Esp3I CGTCTC 1 cut(s) 647
FalI AAGNNNNNCTT 4 cut(s) 28, 60, 258, 290
FbaI TGATCA 3 cut(s) 409, 816, 856
Fnu4HI GCNGC 5 cut(s) 30, 302, 394, 949, 1347
FokI GGATG 3 cut(s) 169, 277, 670
FriOI GRGCYC 1 cut(s) 58
Fsp4HI GCNGC 5 cut(s) 30, 302, 394, 949, 1347
FspBI CTAG 5 cut(s) 72, 383, 479, 905, 1323
FspI TGCGCA 2 cut(s) 397, 941
GlaI GCGC 6 cut(s) 167, 397, 492, 941, 1343, 1345
GluI GCNGC 5 cut(s) 30, 302, 394, 949, 1347
GsuI CTGGAG 1 cut(s) 1210
HaeII RGCGCY 1 cut(s) 169
HaeIII GGCC 1 cut(s) 1309
HapII CCGG 2 cut(s) 205, 356
HhaI GCGC 6 cut(s) 168, 398, 493, 942, 1344, 1346
Hin6I GCGC 6 cut(s) 166, 396, 491, 940, 1342, 1344
HinP1I GCGC 6 cut(s) 166, 396, 491, 940, 1342, 1344
HinfI GANTC 3 cut(s) 324, 671, 1357
HpaII CCGG 2 cut(s) 205, 356
HphI GGTGA 9 cut(s) 26, 554, 560, 671, 726, 779, 857, 932, 1175
Hpy166II GTNNAC 4 cut(s) 174, 782, 1010, 1282
Hpy188I TCNGA 5 cut(s) 60, 345, 652, 887, 1125
Hpy188III TCNNGA 6 cut(s) 36, 328, 814, 980, 1066, 1243
Hpy8I GTNNAC 4 cut(s) 174, 782, 1010, 1282
HpyAV CCTTC 3 cut(s) 359, 820, 1154
HpyCH4III ACNGT 5 cut(s) 242, 542, 548, 738, 1097
HpyCH4IV ACGT 1 cut(s) 415
HpyF10VI GCNNNNNNNGC 4 cut(s) 399, 948, 1016, 1306
HpyF3I CTNAG 3 cut(s) 212, 297, 305
HpySE526I ACGT 1 cut(s) 415
HspAI GCGC 6 cut(s) 166, 396, 491, 940, 1342, 1344
Ksp22I TGATCA 3 cut(s) 409, 816, 856
Kzo9I GATC 9 cut(s) 226, 409, 511, 594, 718, 805, 816, 856, 1120
LguI GCTCTTC 1 cut(s) 345
Lsp1109I GCAGC 4 cut(s) 16, 380, 960, 1358
LweI GCATC 1 cut(s) 1267
MaeI CTAG 5 cut(s) 72, 383, 479, 905, 1323
MaeII ACGT 1 cut(s) 415
MaeIII GTNAC 1 cut(s) 542
MalI GATC 9 cut(s) 228, 411, 513, 596, 720, 807, 818, 858, 1122
MbiI CCGCTC 1 cut(s) 6
MboI GATC 9 cut(s) 226, 409, 511, 594, 718, 805, 816, 856, 1120
MfeI CAATTG 3 cut(s) 675, 852, 1020
MflI RGATCY 1 cut(s) 805
MhlI GDGCHC 3 cut(s) 58, 176, 1012
MlyI GAGTC 1 cut(s) 680
MroXI GAANNNNTTC 1 cut(s) 286
MseI TTAA 2 cut(s) 276, 561
MslI CAYNNNNRTG 1 cut(s) 1076
MspI CCGG 2 cut(s) 205, 356
MspR9I CCNGG 3 cut(s) 126, 917, 1228
MunI CAATTG 3 cut(s) 675, 852, 1020
Mva1269I GAATGC 1 cut(s) 759
MvaI CCWGG 3 cut(s) 126, 917, 1228
MvnI CGCG 1 cut(s) 1344
MwoI GCNNNNNNNGC 4 cut(s) 399, 948, 1016, 1306
NcoI CCATGG 2 cut(s) 337, 1301
NdeII GATC 9 cut(s) 226, 409, 511, 594, 718, 805, 816, 856, 1120
NlaIV GGNNCC 3 cut(s) 807, 914, 1376
NmeAIII GCCGAG 1 cut(s) 592
NmuCI GTSAC 1 cut(s) 542
NsbI TGCGCA 2 cut(s) 397, 941
NspI RCATGY 1 cut(s) 1342
PagI TCATGA 3 cut(s) 327, 813, 1065
PaqCI CACCTGC 1 cut(s) 1024
PauI GCGCGC 1 cut(s) 1342
PciSI GCTCTTC 1 cut(s) 345
PctI GAATGC 1 cut(s) 759
PdmI GAANNNNTTC 1 cut(s) 286
PfeI GAWTC 2 cut(s) 324, 1357
PflMI CCANNNNNTGG 1 cut(s) 168
PfoI TCCNGGA 1 cut(s) 1226
PkrI GCNGC 5 cut(s) 31, 303, 395, 950, 1348
Ple19I CGATCG 1 cut(s) 721
PleI GAGTC 1 cut(s) 679
PpsI GAGTC 1 cut(s) 679
PsiI TTATAA 1 cut(s) 525
Psp124BI GAGCTC 1 cut(s) 58
Psp6I CCWGG 3 cut(s) 124, 915, 1226
PspGI CCWGG 3 cut(s) 124, 915, 1226
PspN4I GGNNCC 3 cut(s) 807, 914, 1376
PspPI GGNCC 1 cut(s) 553
PstNI CAGNNNCTG 1 cut(s) 1111
PsuI RGATCY 1 cut(s) 805
PteI GCGCGC 1 cut(s) 1342
PvuI CGATCG 1 cut(s) 721
RsaI GTAC 5 cut(s) 67, 244, 370, 835, 1223
RsaNI GTAC 5 cut(s) 66, 243, 369, 834, 1222
RseI CAYNNNNRTG 1 cut(s) 1076
SacI GAGCTC 1 cut(s) 58
SapI GCTCTTC 1 cut(s) 345
SaqAI TTAA 2 cut(s) 276, 561
SatI GCNGC 5 cut(s) 30, 302, 394, 949, 1347
Sau3AI GATC 9 cut(s) 226, 409, 511, 594, 718, 805, 816, 856, 1120
Sau96I GGNCC 1 cut(s) 553
ScaI AGTACT 1 cut(s) 835
SchI GAGTC 1 cut(s) 680
ScrFI CCNGG 3 cut(s) 126, 917, 1228
SduI GDGCHC 3 cut(s) 58, 176, 1012
SfaNI GCATC 1 cut(s) 1267
SinI GGWCC 1 cut(s) 553
SmiMI CAYNNNNRTG 1 cut(s) 1076
SpeI ACTAGT 2 cut(s) 71, 478
SsiI CCGC 2 cut(s) 6, 302
SspI AATATT 1 cut(s) 1031
SspMI CTAG 5 cut(s) 72, 383, 479, 905, 1323
SstI GAGCTC 1 cut(s) 58
StyD4I CCNGG 3 cut(s) 124, 915, 1226
StyI CCWWGG 2 cut(s) 337, 1301
TaaI ACNGT 5 cut(s) 242, 542, 548, 738, 1097
TaiI ACGT 1 cut(s) 418
TaqI TCGA 4 cut(s) 52, 118, 717, 1261
TatI WGTACW 1 cut(s) 833
TauI GCSGC 1 cut(s) 304
TfiI GAWTC 2 cut(s) 324, 1357
Tru1I TTAA 2 cut(s) 276, 561
Tru9I TTAA 2 cut(s) 276, 561
TscAI CASTG 2 cut(s) 501, 1078
TseFI GTSAC 1 cut(s) 542
TseI GCWGC 4 cut(s) 29, 393, 948, 1346
Tsp45I GTSAC 1 cut(s) 542
TspDTI ATGAA 7 cut(s) 279, 609, 802, 1054, 1146, 1266, 1359
TspGWI ACGGA 2 cut(s) 300, 1200
TspRI CASTG 2 cut(s) 501, 1078
Van91I CCANNNNNTGG 1 cut(s) 168
VneI GTGCAC 2 cut(s) 172, 1008
VpaK11BI GGWCC 1 cut(s) 553
XapI RAATTY 4 cut(s) 269, 626, 881, 1055
XceI RCATGY 1 cut(s) 1342
XmnI GAANNNNTTC 1 cut(s) 286
XspI CTAG 5 cut(s) 72, 383, 479, 905, 1323
ZrmI AGTACT 1 cut(s) 835
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.