Rroxscaffold_2G00086370

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000216
Physical Location & Seq
Reverse (-)
8574685 .. 8576121
1437 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00086370.1

Sequence Viewer

Length: 1437 bp
ATGAGAGGTGCTGATAGTAGTACTCCTTTGAAAAGAAGTCACAGTAGAATATCGCAGTCGCCTTCCTTTGAAGCACTACCAGCCTCTGATCGTATTCATGATCACTCAAAAAGATCGCCTACAGCAGTGGCAAGACGACCATCATTAAAGATCATGAATATTAGTATTGATGATCTCCCTGACATTTTATTGGTTGAAATACTTTGTCGACTTCCTTGCTATAAATATGTTTGTCAGTCCAAGTTTGTGTGCAGGCACTGGTGTACTCTCATGTCCAATTCTTATTTTATTAGCCGCTTTTTATCTATTCGAAGTCATGATCATCAGCAAACACCAACAATGCGTACTCTGATAAACGAAAGTGGGTATGAATTCCTTACTAGAATATCGTCGTCGACTAAGCCGCTAAGCCCATTGTTCAAAAGATTAAAGAGTTTCCATCGTTTGAAAGAAGAGCCTGTCGTTGTATGTACATATAATGACTTGGTTTTGTGTTGTTCAAGCAACTATGAAAAACGTGATTACTACATCTGCAATCCATACACACTCCAGTGGGTTCCTCTTCCTCCCCCTCCCCCACTTCAAGTTGACCGGATTGTACCAACAGGATTCATCTGTGATCACCCCTACTATTACTGTAAGAAAGACGATCAGGGAGGGCATATCATCCAGCTTAATGCCGAGTATAGGTGCAAGGTTGTGAGATTAATCTTTCCACGGGGTCAGGGATTTATATGCAGAAAATTCAAAGTGCAAATCTTCTCTTCTGAGACAGGTGAATGGACAGAGTCGATTGTATCATTGCCATCAGACATTAAGTTTCGTTTGATCAATTACAAAGCCAACTTTATCTACAACGGAATGCTTTTTTGGGGTGGCGTGTATGATGGTAACTATCTCATCGGACTGGATCCATTCATGATCTACAGCAGTAGTGTTGCTAATGGTGATGATACTACTGATCACTATGAATGTCATTTCACTGAATTAGATAAGGATCACCATTTCATGTTTCAGTGCGTAGGTACATACAGAGGGTGTATGCGTATGTGCAAATACAACAGTTTTACTCGAGTTTTGTCTGTACGGGATTTGAATGAAGAAGAAATATTCCATGGAGGAACTGTTAAATTGTGTGTGGATAATATGATGAAGGTGTACTCCCTGGACAAAGAAATGACGTCGGATGATGATCCTACACGAAATCTTATCCTAGGTTTTGATCCAAACAACGACAATATCTTGTATCTCCAAAGAGCTGAAGAGAGAGACATAGTCAAGTGCGACATTCATACAAAAGAGTGGTCGAAGATGACTGAAAAGCGTGGAATTGATTCCTCCGTCGCCTATTTCCCACTAGTCCTCCCATGGTGGCCAACACCAATTTCTAGACCATCACAACATTGCCATCCCAACCGGAGCCCTCAACCTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

478

Amino Acids

55.55

Weight (kDa)

8.28

Isoelectric Point (pI)

50.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
b-prop_At3g26010-like PF24750 151 - 442 1.7e-12 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000216)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38860 AT5G38860
fragaria_vesca FvH4_2g24261 FvH4_2g24270 FvH4_3g35490 FvH4_6g03181 FvH4_6g03182 FvH4_6g03221 FvH4_6g03380 FvH4_6g05203 FvH4_6g31981 FvH4_6g32061 FvH4_6g37041 FvH4_6g39371 FvH4_6g45291 FvH4_6g45890 FvH4_6g46240 FvH4_6g46241 FvH4_6g46242 FvH4_6g46260 FvH4_6g46280 FvH4_6g46280 FvH4_6g46280 FvH4_6g46290 FvH4_6g46290 FvH4_6g46380
malus_domestica MD02G1008700.v1.1 MD02G1008900.v1.1 MD04G1180900.v1.1 MD04G1181200.v1.1 MD09G1075900.v1.1 MD09G1201600.v1.1 MD15G1017800.v1.1 MD17G1066600.v1.1
prunus_persica Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G512600_v2.0.a1 Prupe.3G059500_v2.0.a1 Prupe.3G059600_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.6G076400_v2.0.a1
pyrus_communis pycom02g00750 pycom03g20320 pycom09g00330 pycom11g08760 pycom17g04880 pycom17g06710 pycom17g19130
rosa_chinensis RchiOBHm_Chr2g0123691 RchiOBHm_Chr2g0164671 RchiOBHm_Chr2g0164681 RchiOBHm_Chr2g0164721 RchiOBHm_Chr2g0164741 RchiOBHm_Chr6g0275871 RchiOBHm_Chr6g0276071 RchiOBHm_Chr6g0291931 RchiOBHm_Chr6g0292091 RchiOBHm_Chr6g0292271 RchiOBHm_Chr7g0221261
rosa_laevigata RLG00000002165 RLG00000007725 RLG00000012062 RLG00000012543 RLG00000013427 RLG00000021441 RLG00000021477 RLG00000021478 RLG00000021480 RLG00000021481
rosa_multiflora Rmu_co8220318.1_g000001 Rmu_co8427407.1_g000001 Rmu_sc0000946.1_g000006 Rmu_sc0000946.1_g000007 Rmu_sc0000946.1_g000010 Rmu_sc0000946.1_g000012 Rmu_sc0000946.1_g000013 Rmu_sc0002030.1_g000015 Rmu_sc0002870.1_g000002 Rmu_sc0003200.1_g000004 Rmu_sc0004915.1_g000002 Rmu_sc0004991.1_g000006 Rmu_sc0006928.1_g000020 Rmu_sc0007384.1_g000001 Rmu_sc0030722.1_g000001 Rmu_sc0030723.1_g000001 Rmu_ssc0000076.1_g000019 Rmu_ssc0000076.1_g000025 Rmu_ssc0000318.1_g000001
rosa_roxburghii Rroxscaffold_2G00086340 Rroxscaffold_2G00086360 Rroxscaffold_2G00086370 Rroxscaffold_2G00086380 Rroxscaffold_2G00086830 Rroxscaffold_2G00087380 Rroxscaffold_2G00120420 Rroxscaffold_7G00175260 Rroxscaffold_7G00175600 Rroxscaffold_7G00177970 Rroxscaffold_7G00192830
rosa_rugosa Rorug02G0247400 Rorug02G0506200 Rorug02G0508300 Rorug02G0509700 Rorug05G0378800 Rorug06G0096600 Rorug06G0096700 Rorug06G0221800
rosa_samantha Rh2AG577600 Rh2AG577700 Rh2AG577800 Rh2AG578000 Rh2AG578100 Rh2BG589200 Rh2CG559800 Rh2DG594400 Rh2DG594500 Rh2DG597800 Rh2DG599400 Rh2DG599500 Rh2DG599600 Rh6AG338400 Rh6BG211200 Rh6BG212600 Rh6BG342900 Rh6BG345600 Rh6CG214800 Rh6CG349100 Rh6CG350600 Rh6CG350700 Rh6CG352600 Rh7AG340800
rosa_wichuraiana Rw1G028590 Rw2G047980 Rw2G047990 Rw5G043360 Rw6G018180 Rw6G029200 Rw6G029450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1184
AccI GTMKAC 2 cut(s) 208, 395
AciI CCGC 2 cut(s) 295, 404
AclWI GGATC 5 cut(s) 905, 918, 1005, 1187, 1217
AcoI YGGCCR 1 cut(s) 1373
AcsI RAATTY 2 cut(s) 371, 743
AcuI CTGAAG 1 cut(s) 1281
AcyI GRCGYC 1 cut(s) 1181
AfaI GTAC 8 cut(s) 22, 265, 346, 472, 600, 1027, 1086, 1160
AfiI CCNNNNNNNGG 1 cut(s) 687
AgsI TTSAA 9 cut(s) 31, 71, 197, 421, 448, 501, 584, 748, 1096
AhlI ACTAGT 1 cut(s) 1357
AjnI CCWGG 1 cut(s) 1164
AjuI GAANNNNNNNTTGG 4 cut(s) 853, 885, 1369, 1401
AleI CACNNNNGTG 1 cut(s) 550
AluBI AGCT 2 cut(s) 673, 1259
AluI AGCT 2 cut(s) 673, 1259
Alw26I GTCTC 2 cut(s) 764, 1263
AlwI GGATC 5 cut(s) 905, 918, 1005, 1187, 1217
AlwNI CAGNNNCTG 2 cut(s) 86, 258
Ama87I CYCGRG 1 cut(s) 1071
AoxI GGCC 1 cut(s) 1373
ApoI RAATTY 2 cut(s) 371, 743
ArsI GACNNNNNNTTYG 2 cut(s) 1289, 1321
AseI ATTAAT 1 cut(s) 707
Asp700I GAANNNNTTC 1 cut(s) 1333
AspA2I CCTAGG 1 cut(s) 1213
AsuHPI GGTGA 4 cut(s) 614, 788, 959, 992
AsuII TTCGAA 1 cut(s) 310
AvaI CYCGRG 1 cut(s) 1071
AvrII CCTAGG 1 cut(s) 1213
BalI TGGCCA 1 cut(s) 1375
BamHI GGATCC 1 cut(s) 910
BanII GRGCYC 1 cut(s) 1424
BccI CCATC 6 cut(s) 148, 447, 814, 881, 1402, 1416
BcgI CGANNNNNNTGC 2 cut(s) 198, 232
BciT130I CCWGG 1 cut(s) 1166
BclI TGATCA 5 cut(s) 100, 319, 619, 828, 961
BcoDI GTCTC 2 cut(s) 764, 1263
BcuI ACTAGT 1 cut(s) 1357
BfaI CTAG 4 cut(s) 381, 1214, 1358, 1389
BfmI CTRYAG 2 cut(s) 120, 925
BisI GCNGC 2 cut(s) 295, 404
BlnI CCTAGG 1 cut(s) 1213
BlpI GCTNAGC 1 cut(s) 407
BlsI GCNGC 2 cut(s) 296, 405
BmcAI AGTACT 1 cut(s) 22
Bme1390I CCNGG 1 cut(s) 1166
BmeT110I CYCGRG 1 cut(s) 1071
BmiI GGNNCC 3 cut(s) 558, 912, 1421
BmrFI CCNGG 1 cut(s) 1166
BpmI CTGGAG 1 cut(s) 533
Bpu1102I GCTNAGC 1 cut(s) 407
Bpu14I TTCGAA 1 cut(s) 310
BsaBI GATNNNNATC 2 cut(s) 996, 1191
BsaHI GRCGYC 1 cut(s) 1181
BsaJI CCNNGG 5 cut(s) 716, 1114, 1164, 1213, 1367
BsaWI WCCGGW 2 cut(s) 591, 1416
BsaXI ACNNNNNCTCC 4 cut(s) 1110, 1140, 1347, 1377
Bsc4I CCNNNNNNNGG 1 cut(s) 687
Bse1I ACTGG 3 cut(s) 263, 550, 912
Bse3DI GCAATG 2 cut(s) 800, 1402
Bse8I GATNNNNATC 2 cut(s) 996, 1191
BseBI CCWGG 1 cut(s) 1166
BseDI CCNNGG 5 cut(s) 716, 1114, 1164, 1213, 1367
BseGI GGATG 3 cut(s) 666, 1192, 1408
BseJI GATNNNNATC 2 cut(s) 996, 1191
BseLI CCNNNNNNNGG 1 cut(s) 687
BseMI GCAATG 2 cut(s) 800, 1402
BseMII CTCAG 1 cut(s) 759
BseNI ACTGG 3 cut(s) 263, 550, 912
BsgI GTGCAG 1 cut(s) 271
BshFI GGCC 1 cut(s) 1375
BsiHKCI CYCGRG 1 cut(s) 1071
BsiSI CCGG 2 cut(s) 592, 1417
BslI CCNNNNNNNGG 1 cut(s) 687
BsmAI GTCTC 2 cut(s) 764, 1263
BsmI GAATGC 1 cut(s) 867
BsnI GGCC 1 cut(s) 1375
BsoBI CYCGRG 1 cut(s) 1071
Bsp119I TTCGAA 1 cut(s) 310
Bsp1286I GDGCHC 1 cut(s) 1424
Bsp1407I TGTACA 1 cut(s) 470
Bsp1720I GCTNAGC 1 cut(s) 407
Bsp19I CCATGG 2 cut(s) 1114, 1367
BspACI CCGC 2 cut(s) 295, 404
BspANI GGCC 1 cut(s) 1375
BspCNI CTCAG 1 cut(s) 760
BspHI TCATGA 4 cut(s) 97, 153, 316, 918
BspLI GGNNCC 3 cut(s) 558, 912, 1421
BspPI GGATC 5 cut(s) 905, 918, 1005, 1187, 1217
BspQI GCTCTTC 1 cut(s) 447
BspT104I TTCGAA 1 cut(s) 310
BsrDI GCAATG 2 cut(s) 800, 1402
BsrGI TGTACA 1 cut(s) 470
BsrI ACTGG 3 cut(s) 263, 550, 912
BssECI CCNNGG 5 cut(s) 716, 1114, 1164, 1213, 1367
BssNI GRCGYC 1 cut(s) 1181
BssT1I CCWWGG 3 cut(s) 1114, 1213, 1367
Bst2UI CCWGG 1 cut(s) 1166
Bst4CI ACNGT 4 cut(s) 44, 638, 1064, 1126
Bst6I CTCTTC 4 cut(s) 447, 567, 769, 1257
BstACI GRCGYC 1 cut(s) 1181
BstAUI TGTACA 1 cut(s) 470
BstBI TTCGAA 1 cut(s) 310
BstC8I GCNNGC 1 cut(s) 254
BstDEI CTNAG 3 cut(s) 399, 407, 768
BstDSI CCRYGG 3 cut(s) 716, 1114, 1367
BstF5I GGATG 3 cut(s) 666, 1192, 1408
BstMAI GTCTC 2 cut(s) 764, 1263
BstMWI GCNNNNNNNGC 1 cut(s) 80
BstNI CCWGG 1 cut(s) 1166
BstSCI CCNGG 1 cut(s) 1164
BstSFI CTRYAG 2 cut(s) 120, 925
BstX2I RGATCY 1 cut(s) 910
BstYI RGATCY 1 cut(s) 910
BsuRI GGCC 1 cut(s) 1375
BtgI CCRYGG 3 cut(s) 716, 1114, 1367
BtsCI GGATG 3 cut(s) 666, 1192, 1408
BtsI GCAGTG 1 cut(s) 132
BtsIMutI CAGTG 5 cut(s) 132, 256, 557, 981, 1022
Cac8I GCNNGC 1 cut(s) 254
CaiI CAGNNNCTG 2 cut(s) 86, 258
CciI TCATGA 4 cut(s) 97, 153, 316, 918
Csp6I GTAC 8 cut(s) 21, 264, 345, 471, 599, 1026, 1085, 1159
CviAII CATG 8 cut(s) 98, 154, 271, 317, 919, 1009, 1115, 1368
CviQI GTAC 8 cut(s) 21, 264, 345, 471, 599, 1026, 1085, 1159
DdeI CTNAG 3 cut(s) 399, 407, 768
EaeI YGGCCR 1 cut(s) 1373
Eam1104I CTCTTC 4 cut(s) 447, 567, 769, 1257
EarI CTCTTC 4 cut(s) 447, 567, 769, 1257
Eco130I CCWWGG 3 cut(s) 1114, 1213, 1367
Eco24I GRGCYC 1 cut(s) 1424
Eco57I CTGAAG 1 cut(s) 1281
Eco88I CYCGRG 1 cut(s) 1071
EcoRI GAATTC 1 cut(s) 371
EcoRII CCWGG 1 cut(s) 1164
EcoT14I CCWWGG 3 cut(s) 1114, 1213, 1367
EcoT38I GRGCYC 1 cut(s) 1424
ErhI CCWWGG 3 cut(s) 1114, 1213, 1367
FaeI CATG 8 cut(s) 101, 157, 274, 320, 922, 1012, 1118, 1371
FatI CATG 8 cut(s) 97, 153, 270, 316, 918, 1008, 1114, 1367
FbaI TGATCA 5 cut(s) 100, 319, 619, 828, 961
FblI GTMKAC 2 cut(s) 208, 395
Fnu4HI GCNGC 2 cut(s) 295, 404
FokI GGATG 3 cut(s) 653, 1199, 1395
FriOI GRGCYC 1 cut(s) 1424
Fsp4HI GCNGC 2 cut(s) 295, 404
FspBI CTAG 4 cut(s) 381, 1214, 1358, 1389
GluI GCNGC 2 cut(s) 295, 404
GsuI CTGGAG 1 cut(s) 533
HaeIII GGCC 1 cut(s) 1375
HapII CCGG 2 cut(s) 592, 1417
Hin1I GRCGYC 1 cut(s) 1181
Hin1II CATG 8 cut(s) 101, 157, 274, 320, 922, 1012, 1118, 1371
HincII GTYRAC 3 cut(s) 209, 396, 589
HindII GTYRAC 3 cut(s) 209, 396, 589
HinfI GANTC 3 cut(s) 609, 788, 1334
HpaII CCGG 2 cut(s) 592, 1417
HphI GGTGA 4 cut(s) 614, 788, 959, 992
Hpy166II GTNNAC 5 cut(s) 209, 264, 396, 589, 1159
Hpy188I TCNGA 6 cut(s) 88, 351, 769, 811, 905, 1186
Hpy188III TCNNGA 5 cut(s) 98, 154, 317, 919, 1389
Hpy8I GTNNAC 5 cut(s) 209, 264, 396, 589, 1159
Hpy99I CGWCG 4 cut(s) 394, 397, 1186, 1346
HpyAV CCTTC 2 cut(s) 72, 1147
HpyCH4III ACNGT 4 cut(s) 44, 638, 1064, 1126
HpyCH4IV ACGT 2 cut(s) 517, 1181
HpyCH4V TGCA 6 cut(s) 252, 534, 693, 738, 754, 1053
HpyF10VI GCNNNNNNNGC 1 cut(s) 80
HpyF3I CTNAG 3 cut(s) 399, 407, 768
HpySE526I ACGT 2 cut(s) 517, 1181
Hsp92I GRCGYC 1 cut(s) 1181
Hsp92II CATG 8 cut(s) 101, 157, 274, 320, 922, 1012, 1118, 1371
Ksp22I TGATCA 5 cut(s) 100, 319, 619, 828, 961
LguI GCTCTTC 1 cut(s) 447
LmnI GCTCC 1 cut(s) 1419
MaeI CTAG 4 cut(s) 381, 1214, 1358, 1389
MaeII ACGT 2 cut(s) 517, 1181
MaeIII GTNAC 2 cut(s) 38, 890
MboII GAAGA 8 cut(s) 464, 554, 751, 756, 1112, 1115, 1274, 1321
MflI RGATCY 1 cut(s) 910
MhlI GDGCHC 1 cut(s) 1424
MlsI TGGCCA 1 cut(s) 1375
MluCI AATT 8 cut(s) 277, 371, 743, 832, 986, 1130, 1329, 1383
MluNI TGGCCA 1 cut(s) 1375
MlyI GAGTC 1 cut(s) 797
MmeI TCCRAC 1 cut(s) 1164
Mox20I TGGCCA 1 cut(s) 1375
MroXI GAANNNNTTC 1 cut(s) 1333
MscI TGGCCA 1 cut(s) 1375
MseI TTAA 6 cut(s) 146, 428, 675, 707, 816, 1128
MslI CAYNNNNRTG 1 cut(s) 550
Msp20I TGGCCA 1 cut(s) 1375
MspI CCGG 2 cut(s) 592, 1417
MspR9I CCNGG 1 cut(s) 1166
Mva1269I GAATGC 1 cut(s) 867
MvaI CCWGG 1 cut(s) 1166
MwoI GCNNNNNNNGC 1 cut(s) 80
NcoI CCATGG 2 cut(s) 1114, 1367
NlaIII CATG 8 cut(s) 101, 157, 274, 320, 922, 1012, 1118, 1371
NlaIV GGNNCC 3 cut(s) 558, 912, 1421
NmeAIII GCCGAG 1 cut(s) 706
NmuCI GTSAC 1 cut(s) 38
NspV TTCGAA 1 cut(s) 310
OliI CACNNNNGTG 1 cut(s) 550
PaeR7I CTCGAG 1 cut(s) 1071
PagI TCATGA 4 cut(s) 97, 153, 316, 918
PciSI GCTCTTC 1 cut(s) 447
PctI GAATGC 1 cut(s) 867
PdmI GAANNNNTTC 1 cut(s) 1333
PfeI GAWTC 2 cut(s) 609, 1334
PflFI GACNNNGTC 2 cut(s) 787, 1274
PkrI GCNGC 2 cut(s) 296, 405
PleI GAGTC 1 cut(s) 796
PpsI GAGTC 1 cut(s) 796
PshBI ATTAAT 1 cut(s) 707
Psp6I CCWGG 1 cut(s) 1164
PspGI CCWGG 1 cut(s) 1164
PspN4I GGNNCC 3 cut(s) 558, 912, 1421
PspXI VCTCGAGB 1 cut(s) 1071
PstNI CAGNNNCTG 2 cut(s) 86, 258
PsuI RGATCY 1 cut(s) 910
PsyI GACNNNGTC 2 cut(s) 787, 1274
RsaI GTAC 8 cut(s) 22, 265, 346, 472, 600, 1027, 1086, 1160
RsaNI GTAC 8 cut(s) 21, 264, 345, 471, 599, 1026, 1085, 1159
RseI CAYNNNNRTG 1 cut(s) 550
SalI GTCGAC 2 cut(s) 207, 394
SapI GCTCTTC 1 cut(s) 447
SaqAI TTAA 6 cut(s) 146, 428, 675, 707, 816, 1128
SatI GCNGC 2 cut(s) 295, 404
ScaI AGTACT 1 cut(s) 22
SchI GAGTC 1 cut(s) 797
ScrFI CCNGG 1 cut(s) 1166
SduI GDGCHC 1 cut(s) 1424
SfcI CTRYAG 2 cut(s) 120, 925
Sfr274I CTCGAG 1 cut(s) 1071
SfuI TTCGAA 1 cut(s) 310
SlaI CTCGAG 1 cut(s) 1071
SmiMI CAYNNNNRTG 1 cut(s) 550
SmlI CTYRAG 1 cut(s) 1071
SmoI CTYRAG 1 cut(s) 1071
SpeI ACTAGT 1 cut(s) 1357
Sse9I AATT 8 cut(s) 277, 371, 743, 832, 986, 1130, 1329, 1383
SsiI CCGC 2 cut(s) 295, 404
SspI AATATT 2 cut(s) 160, 1110
SspMI CTAG 4 cut(s) 381, 1214, 1358, 1389
StyD4I CCNGG 1 cut(s) 1164
StyI CCWWGG 3 cut(s) 1114, 1213, 1367
TaaI ACNGT 4 cut(s) 44, 638, 1064, 1126
TaiI ACGT 2 cut(s) 520, 1184
TaqI TCGA 6 cut(s) 208, 310, 395, 791, 1072, 1307
TasI AATT 8 cut(s) 277, 371, 743, 832, 986, 1130, 1329, 1383
TatI WGTACW 4 cut(s) 20, 263, 470, 1158
TauI GCSGC 2 cut(s) 297, 406
TfiI GAWTC 2 cut(s) 609, 1334
Tru1I TTAA 6 cut(s) 146, 428, 675, 707, 816, 1128
Tru9I TTAA 6 cut(s) 146, 428, 675, 707, 816, 1128
TscAI CASTG 5 cut(s) 132, 263, 557, 988, 1022
TseFI GTSAC 1 cut(s) 38
Tsp45I GTSAC 1 cut(s) 38
TspGWI ACGGA 2 cut(s) 873, 1330
TspRI CASTG 5 cut(s) 132, 263, 557, 988, 1022
Tth111I GACNNNGTC 2 cut(s) 787, 1274
VspI ATTAAT 1 cut(s) 707
XapI RAATTY 2 cut(s) 371, 743
XbaI TCTAGA 1 cut(s) 1388
XhoI CTCGAG 1 cut(s) 1071
XmaJI CCTAGG 1 cut(s) 1213
XmiI GTMKAC 2 cut(s) 208, 395
XmnI GAANNNNTTC 1 cut(s) 1333
XspI CTAG 4 cut(s) 381, 1214, 1358, 1389
ZraI GACGTC 1 cut(s) 1182
ZrmI AGTACT 1 cut(s) 22
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.