Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0000216

Physical Location & Seq

Genomic Coordinates Reverse (-)

5355814 .. 5359385

Gene Structure 3572 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1075900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1080 bp

ATGAATTTGAAGACGACGATGAAGTGTCTCATGGAGGTAGAAGGGCAAGGCAGGGAGAAGAACCGGTCCAAACATTCCGAAACCGAGCAACGTCGGAGGAGCAAGATTAATGAGAGGCAAGCTCTTCAAGCTCAAAGCTTTACCCTTTCTATTTCAAGCACTCCCTTAATTGTTCTTTGTCGATCTTGGTTGTATATTGTTCGATTTTCCGTGTTGCTTGAACTCGAAAAATTTCTGATTCGAATGCCAATCGTCACAATGTATCTACCTGGAAAAGTTGACATCTTCCCTCCCTTCTCGTTATTTCAGATGTTGAGAGATATCATACCCCAGAATGATCAGAAAAGAGATAAGGCTTCGTTGTTGTTGGAGGTTATAGAGTATATAAATTTTTTACAGGAGAAGGTAAATTTATACGAGGGGTCATACCAAGGGTGGAGTCCGGAGCCAACCAAACTGGTGCCATGGAAAAATCATAACAGGTCTGGAGAAAATTTAGCAGATCAGTCTCAAGTTATGAACAATGGTTCGGGTAATGAGAATAATGTGGTTGTCTCACCAGCAATGCTCCCCAACACTCAAAACTCACTGGATCACATTGCTGGGCTAGCTACTCAATTGGTTCCTAATGTGCAGCAACAATGCATCTTAGACTCTATTGGGAGTGGAGTACCCACACAACCGTTGCAGGAATCTATTATTGATGTTCGGAACATGGCTTCTCGGCCGCAATTCCCATCGTTGGCGGGTATAACATCTTCAACCGTTTCAGATGGTAAACTGAATAAACAGGATGAACATAGTGGATCTGGTAGCATCTCAAGTGCCTACTCTCAAGGGGTTTTGAACAATCTGACGCAAGCACTGCAATCTGCTGGTCTGGACTTGTCCCTGGCCAGCATCTCTGTTCAAATGGATGTTGCAAATCGAGCAAGCAGTGGGCTGACATCTGTAGCATCTAGTTCTAAGGCACGTGTAAACCGATCCATGAACAATCAAATGATGACACAGGCTCAAGTAAGTACCTGTGATGGGGGATTTGAACCGGCTCATAAGCGGTACAGAACAAGAGACGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006139 GO:0006351 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031326 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

360

Amino Acids

39.75

Weight (kDa)

8.82

Isoelectric Point (pI)

53.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	100 - 133	9.4e-07	Helix-loop-helix DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000216)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G38860 AT5G38860
fragaria_vesca	FvH4_2g24261 FvH4_2g24270 FvH4_3g35490 FvH4_6g03181 FvH4_6g03182 FvH4_6g03221 FvH4_6g03380 FvH4_6g05203 FvH4_6g31981 FvH4_6g32061 FvH4_6g37041 FvH4_6g39371 FvH4_6g45291 FvH4_6g45890 FvH4_6g46240 FvH4_6g46241 FvH4_6g46242 FvH4_6g46260 FvH4_6g46280 FvH4_6g46280 FvH4_6g46280 FvH4_6g46290 FvH4_6g46290 FvH4_6g46380
malus_domestica	MD02G1008700.v1.1 MD02G1008900.v1.1 MD04G1180900.v1.1 MD04G1181200.v1.1 MD09G1075900.v1.1 MD09G1201600.v1.1 MD15G1017800.v1.1 MD17G1066600.v1.1
prunus_persica	Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G512600_v2.0.a1 Prupe.3G059500_v2.0.a1 Prupe.3G059600_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.6G076400_v2.0.a1
pyrus_communis	pycom02g00750 pycom03g20320 pycom09g00330 pycom11g08760 pycom17g04880 pycom17g06710 pycom17g19130
rosa_chinensis	RchiOBHm_Chr2g0123691 RchiOBHm_Chr2g0164671 RchiOBHm_Chr2g0164681 RchiOBHm_Chr2g0164721 RchiOBHm_Chr2g0164741 RchiOBHm_Chr6g0275871 RchiOBHm_Chr6g0276071 RchiOBHm_Chr6g0291931 RchiOBHm_Chr6g0292091 RchiOBHm_Chr6g0292271 RchiOBHm_Chr7g0221261
rosa_laevigata	RLG00000002165 RLG00000007725 RLG00000012062 RLG00000012543 RLG00000013427 RLG00000021441 RLG00000021477 RLG00000021478 RLG00000021480 RLG00000021481
rosa_multiflora	Rmu_co8220318.1_g000001 Rmu_co8427407.1_g000001 Rmu_sc0000946.1_g000006 Rmu_sc0000946.1_g000007 Rmu_sc0000946.1_g000010 Rmu_sc0000946.1_g000012 Rmu_sc0000946.1_g000013 Rmu_sc0002030.1_g000015 Rmu_sc0002870.1_g000002 Rmu_sc0003200.1_g000004 Rmu_sc0004915.1_g000002 Rmu_sc0004991.1_g000006 Rmu_sc0006928.1_g000020 Rmu_sc0007384.1_g000001 Rmu_sc0030722.1_g000001 Rmu_sc0030723.1_g000001 Rmu_ssc0000076.1_g000019 Rmu_ssc0000076.1_g000025 Rmu_ssc0000318.1_g000001
rosa_roxburghii	Rroxscaffold_2G00086340 Rroxscaffold_2G00086360 Rroxscaffold_2G00086370 Rroxscaffold_2G00086380 Rroxscaffold_2G00086830 Rroxscaffold_2G00087380 Rroxscaffold_2G00120420 Rroxscaffold_7G00175260 Rroxscaffold_7G00175600 Rroxscaffold_7G00177970 Rroxscaffold_7G00192830
rosa_rugosa	Rorug02G0247400 Rorug02G0506200 Rorug02G0508300 Rorug02G0509700 Rorug05G0378800 Rorug06G0096600 Rorug06G0096700 Rorug06G0221800
rosa_samantha	Rh2AG577600 Rh2AG577700 Rh2AG577800 Rh2AG578000 Rh2AG578100 Rh2BG589200 Rh2CG559800 Rh2DG594400 Rh2DG594500 Rh2DG597800 Rh2DG599400 Rh2DG599500 Rh2DG599600 Rh6AG338400 Rh6BG211200 Rh6BG212600 Rh6BG342900 Rh6BG345600 Rh6CG214800 Rh6CG349100 Rh6CG350600 Rh6CG350700 Rh6CG352600 Rh7AG340800
rosa_wichuraiana	Rw1G028590 Rw2G047980 Rw2G047990 Rw5G043360 Rw6G018180 Rw6G029200 Rw6G029450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	460
AccIII	TCCGGA	1 cut(s)	442
AciI	CCGC	3 cut(s)	728, 746, 1057
AclWI	GGATC	3 cut(s)	600, 814, 978
AcoI	YGGCCR	2 cut(s)	725, 894
AcsI	RAATTY	5 cut(s)	4, 230, 388, 409, 493
AcvI	CACGTG	1 cut(s)	974
AfaI	GTAC	3 cut(s)	672, 1024, 1061
AfiI	CCNNNNNNNGG	2 cut(s)	742, 1032
AflIII	ACRYGT	1 cut(s)	973
AgeI	ACCGGT	1 cut(s)	63
AgsI	TTSAA	8 cut(s)	10, 128, 156, 221, 762, 847, 911, 1043
AjnI	CCWGG	2 cut(s)	268, 891
AluBI	AGCT	4 cut(s)	122, 131, 138, 611
AluI	AGCT	4 cut(s)	122, 131, 138, 611
Alw26I	GTCTC	4 cut(s)	32, 513, 559, 1065
AlwI	GGATC	3 cut(s)	600, 814, 978
Aor13HI	TCCGGA	1 cut(s)	442
AoxI	GGCC	2 cut(s)	725, 894
ApeKI	GCWGC	1 cut(s)	634
ApoI	RAATTY	5 cut(s)	4, 230, 388, 409, 493
AseI	ATTAAT	1 cut(s)	108
AsiGI	ACCGGT	1 cut(s)	63
Asp700I	GAANNNNTTC	1 cut(s)	231
AspS9I	GGNCC	1 cut(s)	66
AsuHPI	GGTGA	1 cut(s)	549
AsuII	TTCGAA	1 cut(s)	241
AsuNHI	GCTAGC	1 cut(s)	607
AvaII	GGWCC	1 cut(s)	66
BalI	TGGCCA	1 cut(s)	896
BanI	GGYRCC	1 cut(s)	460
BarI	GAAGNNNNNNTAC	2 cut(s)	742, 774
BbrPI	CACGTG	1 cut(s)	974
BbsI	GAAGAC	1 cut(s)	17
BbvI	GCAGC	1 cut(s)	646
BccI	CCATC	3 cut(s)	745, 767, 1025
BciT130I	CCWGG	2 cut(s)	270, 893
BclI	TGATCA	1 cut(s)	337
BcoDI	GTCTC	4 cut(s)	32, 513, 559, 1065
BfaI	CTAG	3 cut(s)	608, 960, 1078
BfmI	CTRYAG	1 cut(s)	951
BisI	GCNGC	2 cut(s)	635, 728
BlsI	GCNGC	2 cut(s)	636, 729
Bme1390I	CCNGG	2 cut(s)	270, 893
Bme18I	GGWCC	1 cut(s)	66
BmgT120I	GGNCC	1 cut(s)	66
BmiI	GGNNCC	3 cut(s)	447, 462, 624
BmrFI	CCNGG	2 cut(s)	270, 893
BmsI	GCATC	4 cut(s)	654, 825, 909, 965
BmtI	GCTAGC	1 cut(s)	611
BpiI	GAAGAC	1 cut(s)	17
BplI	GAGNNNNNCTC	2 cut(s)	106, 138
BpmI	CTGGAG	1 cut(s)	507
Bpu14I	TTCGAA	1 cut(s)	241
BpuEI	CTTGAG	4 cut(s)	495, 805, 819, 999
BsaAI	YACGTR	1 cut(s)	974
BsaJI	CCNNGG	3 cut(s)	430, 464, 891
BsaWI	WCCGGW	2 cut(s)	63, 442
Bsc4I	CCNNNNNNNGG	2 cut(s)	742, 1032
Bse118I	RCCGGY	2 cut(s)	63, 1045
Bse1I	ACTGG	2 cut(s)	462, 594
Bse3DI	GCAATG	2 cut(s)	570, 597
BseAI	TCCGGA	1 cut(s)	442
BseBI	CCWGG	2 cut(s)	270, 893
BseDI	CCNNGG	3 cut(s)	430, 464, 891
BseGI	GGATG	2 cut(s)	799, 922
BseLI	CCNNNNNNNGG	2 cut(s)	742, 1032
BseMI	GCAATG	2 cut(s)	570, 597
BseNI	ACTGG	2 cut(s)	462, 594
BseRI	GAGGAG	1 cut(s)	112
BseX3I	CGGCCG	1 cut(s)	725
BseXI	GCAGC	1 cut(s)	646
BseYI	CCCAGC	1 cut(s)	602
BsgI	GTGCAG	1 cut(s)	653
Bsh1285I	CGRYCG	1 cut(s)	728
BshFI	GGCC	2 cut(s)	727, 896
BshNI	GGYRCC	1 cut(s)	460
BshTI	ACCGGT	1 cut(s)	63
BsiEI	CGRYCG	1 cut(s)	728
BsiSI	CCGG	3 cut(s)	64, 443, 1046
BslFI	GGGAC	1 cut(s)	874
BslI	CCNNNNNNNGG	2 cut(s)	742, 1032
BsmAI	GTCTC	4 cut(s)	32, 513, 559, 1065
BsmBI	CGTCTC	1 cut(s)	1065
BsmFI	GGGAC	1 cut(s)	874
BsmI	GAATGC	1 cut(s)	249
BsnI	GGCC	2 cut(s)	727, 896
Bsp119I	TTCGAA	1 cut(s)	241
Bsp13I	TCCGGA	1 cut(s)	442
Bsp143I	GATC	6 cut(s)	182, 337, 502, 592, 806, 983
Bsp19I	CCATGG	1 cut(s)	464
BspACI	CCGC	3 cut(s)	728, 746, 1057
BspANI	GGCC	2 cut(s)	727, 896
BspEI	TCCGGA	1 cut(s)	442
BspLI	GGNNCC	3 cut(s)	447, 462, 624
BspOI	GCTAGC	1 cut(s)	611
BspPI	GGATC	3 cut(s)	600, 814, 978
BspQI	GCTCTTC	1 cut(s)	129
BspT104I	TTCGAA	1 cut(s)	241
BspT107I	GGYRCC	1 cut(s)	460
BsrDI	GCAATG	2 cut(s)	570, 597
BsrFI	RCCGGY	2 cut(s)	63, 1045
BsrI	ACTGG	2 cut(s)	462, 594
BssAI	RCCGGY	2 cut(s)	63, 1045
BssECI	CCNNGG	3 cut(s)	430, 464, 891
BssMI	GATC	6 cut(s)	182, 337, 502, 592, 806, 983
BssT1I	CCWWGG	2 cut(s)	430, 464
Bst2UI	CCWGG	2 cut(s)	270, 893
Bst4CI	ACNGT	2 cut(s)	684, 766
Bst6I	CTCTTC	1 cut(s)	129
BstAPI	GCANNNNNTGC	1 cut(s)	865
BstBAI	YACGTR	1 cut(s)	974
BstBI	TTCGAA	1 cut(s)	241
BstC8I	GCNNGC	5 cut(s)	120, 609, 861, 898, 934
BstDEI	CTNAG	2 cut(s)	649, 966
BstDSI	CCRYGG	1 cut(s)	464
BstF5I	GGATG	2 cut(s)	799, 922
BstKTI	GATC	6 cut(s)	185, 340, 505, 595, 809, 986
BstMAI	GTCTC	4 cut(s)	32, 513, 559, 1065
BstMBI	GATC	6 cut(s)	182, 337, 502, 592, 806, 983
BstMCI	CGRYCG	1 cut(s)	728
BstMWI	GCNNNNNNNGC	4 cut(s)	128, 608, 865, 929
BstNI	CCWGG	2 cut(s)	270, 893
BstSCI	CCNGG	2 cut(s)	268, 891
BstSFI	CTRYAG	1 cut(s)	951
BstV1I	GCAGC	1 cut(s)	646
BstV2I	GAAGAC	1 cut(s)	17
BstX2I	RGATCY	1 cut(s)	806
BstYI	RGATCY	1 cut(s)	806
BstZI	CGGCCG	1 cut(s)	725
BsuRI	GGCC	2 cut(s)	727, 896
BtgI	CCRYGG	1 cut(s)	464
BtsCI	GGATG	2 cut(s)	799, 922
BtsI	GCAGTG	2 cut(s)	863, 943
BtsIMutI	CAGTG	3 cut(s)	587, 863, 943
Cac8I	GCNNGC	5 cut(s)	120, 609, 861, 898, 934
Cfr10I	RCCGGY	2 cut(s)	63, 1045
Cfr13I	GGNCC	1 cut(s)	66
CseI	GACGC	1 cut(s)	865
Csp6I	GTAC	3 cut(s)	671, 1023, 1060
CspAI	ACCGGT	1 cut(s)	63
CviAII	CATG	4 cut(s)	31, 465, 715, 988
CviQI	GTAC	3 cut(s)	671, 1023, 1060
DdeI	CTNAG	2 cut(s)	649, 966
DpnI	GATC	6 cut(s)	184, 339, 504, 594, 808, 985
DpnII	GATC	6 cut(s)	182, 337, 502, 592, 806, 983
EaeI	YGGCCR	2 cut(s)	725, 894
EagI	CGGCCG	1 cut(s)	725
Eam1104I	CTCTTC	1 cut(s)	129
EarI	CTCTTC	1 cut(s)	129
EclXI	CGGCCG	1 cut(s)	725
Eco130I	CCWWGG	2 cut(s)	430, 464
Eco32I	GATATC	1 cut(s)	322
Eco47I	GGWCC	1 cut(s)	66
Eco52I	CGGCCG	1 cut(s)	725
Eco72I	CACGTG	1 cut(s)	974
EcoRII	CCWGG	2 cut(s)	268, 891
EcoRV	GATATC	1 cut(s)	322
EcoT14I	CCWWGG	2 cut(s)	430, 464
EcoT22I	ATGCAT	1 cut(s)	647
ErhI	CCWWGG	2 cut(s)	430, 464
Esp3I	CGTCTC	1 cut(s)	1065
FaeI	CATG	4 cut(s)	34, 468, 718, 991
FaqI	GGGAC	1 cut(s)	874
FatI	CATG	4 cut(s)	30, 464, 714, 987
FauI	CCCGC	1 cut(s)	739
FbaI	TGATCA	1 cut(s)	337
Fnu4HI	GCNGC	2 cut(s)	635, 728
FokI	GGATG	2 cut(s)	806, 929
Fsp4HI	GCNGC	2 cut(s)	635, 728
FspBI	CTAG	3 cut(s)	608, 960, 1078
GluI	GCNGC	2 cut(s)	635, 728
GsaI	CCCAGC	1 cut(s)	606
GsuI	CTGGAG	1 cut(s)	507
HaeIII	GGCC	2 cut(s)	727, 896
HapII	CCGG	3 cut(s)	64, 443, 1046
HgaI	GACGC	1 cut(s)	865
Hin1II	CATG	4 cut(s)	34, 468, 718, 991
HincII	GTYRAC	1 cut(s)	280
HindII	GTYRAC	1 cut(s)	280
HindIII	AAGCTT	1 cut(s)	136
HinfI	GANTC	4 cut(s)	238, 439, 653, 692
HpaII	CCGG	3 cut(s)	64, 443, 1046
HphI	GGTGA	1 cut(s)	549
Hpy166II	GTNNAC	3 cut(s)	280, 779, 979
Hpy188I	TCNGA	8 cut(s)	79, 96, 237, 309, 342, 711, 772, 855
Hpy188III	TCNNGA	3 cut(s)	443, 486, 881
Hpy8I	GTNNAC	3 cut(s)	280, 779, 979
Hpy99I	CGWCG	2 cut(s)	19, 96
HpyAV	CCTTC	3 cut(s)	35, 304, 397
HpyCH4III	ACNGT	2 cut(s)	684, 766
HpyCH4IV	ACGT	2 cut(s)	91, 973
HpyCH4V	TGCA	5 cut(s)	634, 645, 688, 868, 923
HpyF10VI	GCNNNNNNNGC	4 cut(s)	128, 608, 865, 929
HpyF3I	CTNAG	2 cut(s)	649, 966
HpySE526I	ACGT	2 cut(s)	91, 973
Hsp92II	CATG	4 cut(s)	34, 468, 718, 991
Kpn2I	TCCGGA	1 cut(s)	442
Ksp22I	TGATCA	1 cut(s)	337
Kzo9I	GATC	6 cut(s)	182, 337, 502, 592, 806, 983
LguI	GCTCTTC	1 cut(s)	129
LmnI	GCTCC	3 cut(s)	99, 445, 573
Lsp1109I	GCAGC	1 cut(s)	646
LweI	GCATC	4 cut(s)	654, 825, 909, 965
MaeI	CTAG	3 cut(s)	608, 960, 1078
MaeII	ACGT	2 cut(s)	91, 973
MaeIII	GTNAC	1 cut(s)	253
MalI	GATC	6 cut(s)	184, 339, 504, 594, 808, 985
MboI	GATC	6 cut(s)	182, 337, 502, 592, 806, 983
MboII	GAAGA	5 cut(s)	22, 70, 116, 277, 750
MfeI	CAATTG	1 cut(s)	617
MflI	RGATCY	1 cut(s)	806
MlsI	TGGCCA	1 cut(s)	896
MluCI	AATT	8 cut(s)	4, 168, 230, 388, 409, 493, 617, 731
MluNI	TGGCCA	1 cut(s)	896
MlyI	GAGTC	2 cut(s)	448, 647
MmeI	TCCRAC	2 cut(s)	74, 348
MnlI	CCTC	6 cut(s)	28, 90, 108, 300, 364, 412
Mox20I	TGGCCA	1 cut(s)	896
Mph1103I	ATGCAT	1 cut(s)	647
MroI	TCCGGA	1 cut(s)	442
MroXI	GAANNNNTTC	1 cut(s)	231
MscI	TGGCCA	1 cut(s)	896
MseI	TTAA	2 cut(s)	108, 167
Msp20I	TGGCCA	1 cut(s)	896
MspI	CCGG	3 cut(s)	64, 443, 1046
MspR9I	CCNGG	2 cut(s)	270, 893
MunI	CAATTG	1 cut(s)	617
Mva1269I	GAATGC	1 cut(s)	249
MvaI	CCWGG	2 cut(s)	270, 893
MwoI	GCNNNNNNNGC	4 cut(s)	128, 608, 865, 929
NcoI	CCATGG	1 cut(s)	464
NdeII	GATC	6 cut(s)	182, 337, 502, 592, 806, 983
NheI	GCTAGC	1 cut(s)	607
NlaIII	CATG	4 cut(s)	34, 468, 718, 991
NlaIV	GGNNCC	3 cut(s)	447, 462, 624
NmeAIII	GCCGAG	1 cut(s)	703
NmuCI	GTSAC	1 cut(s)	253
NsiI	ATGCAT	1 cut(s)	647
NspV	TTCGAA	1 cut(s)	241
PciSI	GCTCTTC	1 cut(s)	129
PcsI	WCGNNNNNNNCGW	1 cut(s)	979
PctI	GAATGC	1 cut(s)	249
PdmI	GAANNNNTTC	1 cut(s)	231
PfeI	GAWTC	2 cut(s)	238, 692
PinAI	ACCGGT	1 cut(s)	63
PkrI	GCNGC	2 cut(s)	636, 729
PleI	GAGTC	2 cut(s)	447, 647
PmaCI	CACGTG	1 cut(s)	974
PmlI	CACGTG	1 cut(s)	974
PpsI	GAGTC	2 cut(s)	447, 647
Ppu21I	YACGTR	1 cut(s)	974
PshBI	ATTAAT	1 cut(s)	108
Psp6I	CCWGG	2 cut(s)	268, 891
PspCI	CACGTG	1 cut(s)	974
PspFI	CCCAGC	1 cut(s)	602
PspGI	CCWGG	2 cut(s)	268, 891
PspN4I	GGNNCC	3 cut(s)	447, 462, 624
PspPI	GGNCC	1 cut(s)	66
PsuI	RGATCY	1 cut(s)	806
RsaI	GTAC	3 cut(s)	672, 1024, 1061
RsaNI	GTAC	3 cut(s)	671, 1023, 1060
SapI	GCTCTTC	1 cut(s)	129
SaqAI	TTAA	2 cut(s)	108, 167
SatI	GCNGC	2 cut(s)	635, 728
Sau3AI	GATC	6 cut(s)	182, 337, 502, 592, 806, 983
Sau96I	GGNCC	1 cut(s)	66
SchI	GAGTC	2 cut(s)	448, 647
ScrFI	CCNGG	2 cut(s)	270, 893
SfaNI	GCATC	4 cut(s)	654, 825, 909, 965
SfcI	CTRYAG	1 cut(s)	951
SfuI	TTCGAA	1 cut(s)	241
SinI	GGWCC	1 cut(s)	66
SmlI	CTYRAG	4 cut(s)	510, 820, 834, 1014
SmoI	CTYRAG	4 cut(s)	510, 820, 834, 1014
Sse9I	AATT	8 cut(s)	4, 168, 230, 388, 409, 493, 617, 731
SsiI	CCGC	3 cut(s)	728, 746, 1057
SspMI	CTAG	3 cut(s)	608, 960, 1078
StyD4I	CCNGG	2 cut(s)	268, 891
StyI	CCWWGG	2 cut(s)	430, 464
TaaI	ACNGT	2 cut(s)	684, 766
TaiI	ACGT	2 cut(s)	94, 976
TaqI	TCGA	5 cut(s)	181, 202, 225, 241, 928
TasI	AATT	8 cut(s)	4, 168, 230, 388, 409, 493, 617, 731
TauI	GCSGC	1 cut(s)	730
TfiI	GAWTC	2 cut(s)	238, 692
Tru1I	TTAA	2 cut(s)	108, 167
Tru9I	TTAA	2 cut(s)	108, 167
TscAI	CASTG	3 cut(s)	594, 870, 943
TseFI	GTSAC	1 cut(s)	253
TseI	GCWGC	1 cut(s)	634
Tsp45I	GTSAC	1 cut(s)	253
TspDTI	ATGAA	5 cut(s)	17, 35, 533, 810, 1004
TspGWI	ACGGA	1 cut(s)	199
TspRI	CASTG	3 cut(s)	594, 870, 943
VpaK11BI	GGWCC	1 cut(s)	66
VspI	ATTAAT	1 cut(s)	108
XapI	RAATTY	5 cut(s)	4, 230, 388, 409, 493
XmnI	GAANNNNTTC	1 cut(s)	231
XspI	CTAG	3 cut(s)	608, 960, 1078
Zsp2I	ATGCAT	1 cut(s)	647

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.