pycom17g04880

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0000216
Physical Location & Seq
Forward (+)
3367111 .. 3368818
1708 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g04880.1

Sequence Viewer

Length: 1227 bp
ATGTGTGATCTTCCCTACTACAAGTATGCGAAAGAGGACGCGAAAGGACATACTGTCCAGCTTAATCCGCAGTATGGGTGCAGGGTTGTGAGATTGATCTCTGACCATTCTAAGCTATCATCCAACCAGTTCAAAGTGCAAATCTTCTCTTCTGAGACTGTTGAATGGAGGGAATCTGTTGTATCATCCCCACGAGATATTAGTCTCGATCATATCGATTACGATACTTGCTATGTTCATGCTTCCAACAGAATGCTGTATTGGATGGGTTATCATAATTTTGTTCTCAGTTTTGATCCCTTCCTGATCAACAAATCTGTTAGAACTAGTAGCAGGGATGGTGATGAAGATATTATTGATCAGAGTTATAAATGTCATCTCGTTGATATTAAGTTTAATTCAGACAGCTTGTCGGTCGAGTGCCTAGGTGTGCACGGAAGGTGTCTCAAGATTTACGCGTACGACGAAGATACCAATACTTTATTAGTTTTGGACTTGAATGGCGACGAAGAATTCATCAATGGAGGATTTGAAATTTTTTTTCTGGAAAACAGTAAACGCATGGAGATGGAGATGATAAATCCGGAAGAAGACCCGATGGAAAGTATAATTTTGGATCCAAATAACGATGAAATTTGTTATCTAACAACTACAGATGGAGAGCCTTTCATGTTCAACCTTGGCACAAAAATTTCGTCAAGAATGGATGACAAGATTACTGAAGACTTATGCTCGTACTGCTTCCCATATGTGCTGACTTGCTGGCCGACTCCAGTCCCATGTTTGTTAGCAACCAAGACTGCGTTTAATGGAATTAACCGGGACTCGCGTCGACTAAAACCTTCGCTAAAAGGTCTTAGCACCTTCGCCCTCTCGTCTTCTTCTTCCCCGCCTTCTCCTTCCTCGTCGCACCTTTGCCCTCTCGATCGTCTTCAGCTCCCTTGTCGGTTTCCAGTCGCATACTCTGCGTTCGCTACCAAAGGCCTCCTCAAGGGGGCGGTCATCTGTTTGGTTGCTCAGGGCCTCACCGTTAGCGGCTCCAACTACACCTCCAGGCACCGGTCAAATTCGTACTCCCACCATCTCAGTTACGCTTACCTTCCTATCTCTCTCTCCCATCTCTTTCTCTCTCTACTCTCTAAACTTTTTTTATCTATCAAATTCTCAAAATTCAACCTGCCTGATAAATTGATTGATGGTAATTTTGATTCAATTTCAAACTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

409

Amino Acids

46.16

Weight (kDa)

5.55

Isoelectric Point (pI)

43.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000216)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38860 AT5G38860
fragaria_vesca FvH4_2g24261 FvH4_2g24270 FvH4_3g35490 FvH4_6g03181 FvH4_6g03182 FvH4_6g03221 FvH4_6g03380 FvH4_6g05203 FvH4_6g31981 FvH4_6g32061 FvH4_6g37041 FvH4_6g39371 FvH4_6g45291 FvH4_6g45890 FvH4_6g46240 FvH4_6g46241 FvH4_6g46242 FvH4_6g46260 FvH4_6g46280 FvH4_6g46280 FvH4_6g46280 FvH4_6g46290 FvH4_6g46290 FvH4_6g46380
malus_domestica MD02G1008700.v1.1 MD02G1008900.v1.1 MD04G1180900.v1.1 MD04G1181200.v1.1 MD09G1075900.v1.1 MD09G1201600.v1.1 MD15G1017800.v1.1 MD17G1066600.v1.1
prunus_persica Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G512600_v2.0.a1 Prupe.3G059500_v2.0.a1 Prupe.3G059600_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.6G076400_v2.0.a1
pyrus_communis pycom02g00750 pycom03g20320 pycom09g00330 pycom11g08760 pycom17g04880 pycom17g06710 pycom17g19130
rosa_chinensis RchiOBHm_Chr2g0123691 RchiOBHm_Chr2g0164671 RchiOBHm_Chr2g0164681 RchiOBHm_Chr2g0164721 RchiOBHm_Chr2g0164741 RchiOBHm_Chr6g0275871 RchiOBHm_Chr6g0276071 RchiOBHm_Chr6g0291931 RchiOBHm_Chr6g0292091 RchiOBHm_Chr6g0292271 RchiOBHm_Chr7g0221261
rosa_laevigata RLG00000002165 RLG00000007725 RLG00000012062 RLG00000012543 RLG00000013427 RLG00000021441 RLG00000021477 RLG00000021478 RLG00000021480 RLG00000021481
rosa_multiflora Rmu_co8220318.1_g000001 Rmu_co8427407.1_g000001 Rmu_sc0000946.1_g000006 Rmu_sc0000946.1_g000007 Rmu_sc0000946.1_g000010 Rmu_sc0000946.1_g000012 Rmu_sc0000946.1_g000013 Rmu_sc0002030.1_g000015 Rmu_sc0002870.1_g000002 Rmu_sc0003200.1_g000004 Rmu_sc0004915.1_g000002 Rmu_sc0004991.1_g000006 Rmu_sc0006928.1_g000020 Rmu_sc0007384.1_g000001 Rmu_sc0030722.1_g000001 Rmu_sc0030723.1_g000001 Rmu_ssc0000076.1_g000019 Rmu_ssc0000076.1_g000025 Rmu_ssc0000318.1_g000001
rosa_roxburghii Rroxscaffold_2G00086340 Rroxscaffold_2G00086360 Rroxscaffold_2G00086370 Rroxscaffold_2G00086380 Rroxscaffold_2G00086830 Rroxscaffold_2G00087380 Rroxscaffold_2G00120420 Rroxscaffold_7G00175260 Rroxscaffold_7G00175600 Rroxscaffold_7G00177970 Rroxscaffold_7G00192830
rosa_rugosa Rorug02G0247400 Rorug02G0506200 Rorug02G0508300 Rorug02G0509700 Rorug05G0378800 Rorug06G0096600 Rorug06G0096700 Rorug06G0221800
rosa_samantha Rh2AG577600 Rh2AG577700 Rh2AG577800 Rh2AG578000 Rh2AG578100 Rh2BG589200 Rh2CG559800 Rh2DG594400 Rh2DG594500 Rh2DG597800 Rh2DG599400 Rh2DG599500 Rh2DG599600 Rh6AG338400 Rh6BG211200 Rh6BG212600 Rh6BG342900 Rh6BG345600 Rh6CG214800 Rh6CG349100 Rh6CG350600 Rh6CG350700 Rh6CG352600 Rh7AG340800
rosa_wichuraiana Rw1G028590 Rw2G047980 Rw2G047990 Rw5G043360 Rw6G018180 Rw6G029200 Rw6G029450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 369
Acc36I ACCTGC 1 cut(s) 1185
AccB1I GGYRCC 1 cut(s) 1056
AccI GTMKAC 1 cut(s) 832
AccII CGCG 3 cut(s) 41, 458, 829
AccIII TCCGGA 1 cut(s) 583
AciI CCGC 4 cut(s) 68, 890, 998, 1035
AclWI GGATC 3 cut(s) 290, 611, 624
AcoI YGGCCR 1 cut(s) 764
AcsI RAATTY 7 cut(s) 512, 534, 633, 690, 1066, 1160, 1169
AcuI CTGAAG 2 cut(s) 741, 917
AfaI GTAC 3 cut(s) 461, 737, 1073
AfiI CCNNNNNNNGG 4 cut(s) 74, 991, 994, 1059
AflIII ACRYGT 1 cut(s) 456
AgeI ACCGGT 1 cut(s) 1059
AgsI TTSAA 8 cut(s) 133, 164, 499, 533, 676, 1174, 1212, 1218
AhdI GACNNNNNGTC 2 cut(s) 53, 409
AhlI ACTAGT 1 cut(s) 326
AjnI CCWGG 1 cut(s) 1052
AjuI GAANNNNNNNTTGG 2 cut(s) 244, 276
AluBI AGCT 4 cut(s) 61, 115, 408, 937
AluI AGCT 4 cut(s) 61, 115, 408, 937
Alw21I GWGCWC 1 cut(s) 435
Alw26I GTCTC 3 cut(s) 149, 209, 449
Alw44I GTGCAC 1 cut(s) 431
AlwI GGATC 3 cut(s) 290, 611, 624
Aor13HI TCCGGA 1 cut(s) 583
AoxI GGCC 3 cut(s) 764, 982, 1021
ApaLI GTGCAC 1 cut(s) 431
ApoI RAATTY 7 cut(s) 512, 534, 633, 690, 1066, 1160, 1169
ArsI GACNNNNNNTTYG 2 cut(s) 680, 712
AsiGI ACCGGT 1 cut(s) 1059
AspA2I CCTAGG 1 cut(s) 424
AspS9I GGNCC 1 cut(s) 1021
AsuC2I CCSGG 1 cut(s) 821
AsuHPI GGTGA 2 cut(s) 353, 1018
AvrII CCTAGG 1 cut(s) 424
BaeGI GKGCMC 1 cut(s) 435
BamHI GGATCC 1 cut(s) 616
BanI GGYRCC 1 cut(s) 1056
BauI CACGAG 2 cut(s) 192, 1222
BbsI GAAGAC 4 cut(s) 597, 729, 870, 923
Bbv12I GWGCWC 1 cut(s) 435
BccI CCATC 8 cut(s) 259, 332, 562, 592, 650, 1089, 1125, 1190
BciT130I CCWGG 1 cut(s) 1054
BclI TGATCA 2 cut(s) 306, 358
BcnI CCSGG 1 cut(s) 821
BcoDI GTCTC 3 cut(s) 149, 209, 449
BcuI ACTAGT 1 cut(s) 326
BfaI CTAG 2 cut(s) 327, 425
BfmI CTRYAG 1 cut(s) 651
BfuAI ACCTGC 1 cut(s) 1185
BisI GCNGC 1 cut(s) 1036
BlnI CCTAGG 1 cut(s) 424
BlsI GCNGC 1 cut(s) 1037
Bme1390I CCNGG 2 cut(s) 821, 1054
BmeRI GACNNNNNGTC 2 cut(s) 53, 409
BmgT120I GGNCC 1 cut(s) 1021
BmiI GGNNCC 3 cut(s) 618, 1039, 1058
BmrFI CCNGG 2 cut(s) 821, 1054
BoxI GACNNNNGTC 2 cut(s) 773, 828
BpiI GAAGAC 4 cut(s) 597, 729, 870, 923
BpmI CTGGAG 2 cut(s) 756, 1036
Bpu10I CCTNAGC 1 cut(s) 1017
BpuEI CTTGAG 2 cut(s) 431, 974
BpuMI CCSGG 1 cut(s) 821
Bsa29I ATCGAT 1 cut(s) 216
BsaJI CCNNGG 2 cut(s) 424, 679
BsaWI WCCGGW 2 cut(s) 583, 1059
BsaXI ACNNNNNCTCC 2 cut(s) 1034, 1064
Bsc4I CCNNNNNNNGG 4 cut(s) 74, 991, 994, 1059
Bse118I RCCGGY 1 cut(s) 1059
Bse1I ACTGG 3 cut(s) 127, 773, 953
BseAI TCCGGA 1 cut(s) 583
BseBI CCWGG 1 cut(s) 1054
BseCI ATCGAT 1 cut(s) 216
BseDI CCNNGG 2 cut(s) 424, 679
BseGI GGATG 5 cut(s) 119, 185, 270, 343, 712
BseLI CCNNNNNNNGG 4 cut(s) 74, 991, 994, 1059
BseMII CTCAG 4 cut(s) 144, 301, 1031, 1099
BseNI ACTGG 3 cut(s) 127, 773, 953
BseRI GAGGAG 1 cut(s) 977
BseSI GKGCMC 1 cut(s) 435
BsgI GTGCAG 1 cut(s) 100
Bsh1236I CGCG 3 cut(s) 41, 458, 829
Bsh1285I CGRYCG 2 cut(s) 417, 928
BshFI GGCC 3 cut(s) 766, 984, 1023
BshNI GGYRCC 1 cut(s) 1056
BshTI ACCGGT 1 cut(s) 1059
BshVI ATCGAT 1 cut(s) 216
BsiEI CGRYCG 2 cut(s) 417, 928
BsiHKAI GWGCWC 1 cut(s) 435
BsiSI CCGG 3 cut(s) 584, 820, 1060
BsiWI CGTACG 1 cut(s) 459
BslFI GGGAC 2 cut(s) 761, 836
BslI CCNNNNNNNGG 4 cut(s) 74, 991, 994, 1059
BsmAI GTCTC 3 cut(s) 149, 209, 449
BsmFI GGGAC 2 cut(s) 761, 836
BsmI GAATGC 1 cut(s) 258
BsnI GGCC 3 cut(s) 766, 984, 1023
Bsp1286I GDGCHC 1 cut(s) 435
Bsp13I TCCGGA 1 cut(s) 583
Bsp143I GATC 8 cut(s) 7, 96, 208, 295, 306, 358, 616, 925
BspACI CCGC 4 cut(s) 68, 890, 998, 1035
BspANI GGCC 3 cut(s) 766, 984, 1023
BspCNI CTCAG 4 cut(s) 145, 300, 1030, 1098
BspDI ATCGAT 1 cut(s) 216
BspEI TCCGGA 1 cut(s) 583
BspFNI CGCG 3 cut(s) 41, 458, 829
BspLI GGNNCC 3 cut(s) 618, 1039, 1058
BspMI ACCTGC 1 cut(s) 1185
BspPI GGATC 3 cut(s) 290, 611, 624
BspT107I GGYRCC 1 cut(s) 1056
BsrFI RCCGGY 1 cut(s) 1059
BsrI ACTGG 3 cut(s) 127, 773, 953
BssAI RCCGGY 1 cut(s) 1059
BssECI CCNNGG 2 cut(s) 424, 679
BssMI GATC 8 cut(s) 7, 96, 208, 295, 306, 358, 616, 925
BssSI CACGAG 2 cut(s) 192, 1222
BssT1I CCWWGG 2 cut(s) 424, 679
Bst2BI CACGAG 2 cut(s) 192, 1222
Bst2UI CCWGG 1 cut(s) 1054
Bst4CI ACNGT 4 cut(s) 55, 160, 554, 1030
Bst6I CTCTTC 1 cut(s) 154
BstAPI GCANNNNNTGC 1 cut(s) 965
BstC8I GCNNGC 1 cut(s) 764
BstDEI CTNAG 6 cut(s) 111, 153, 287, 857, 1017, 1085
BstENI CCTNNNNNAGG 1 cut(s) 989
BstF5I GGATG 5 cut(s) 119, 185, 270, 343, 712
BstFNI CGCG 3 cut(s) 41, 458, 829
BstKTI GATC 8 cut(s) 10, 99, 211, 298, 309, 361, 619, 928
BstMAI GTCTC 3 cut(s) 149, 209, 449
BstMBI GATC 8 cut(s) 7, 96, 208, 295, 306, 358, 616, 925
BstMCI CGRYCG 2 cut(s) 417, 928
BstMWI GCNNNNNNNGC 3 cut(s) 67, 738, 965
BstNI CCWGG 1 cut(s) 1054
BstPAI GACNNNNGTC 2 cut(s) 773, 828
BstSCI CCNGG 2 cut(s) 819, 1052
BstSFI CTRYAG 1 cut(s) 651
BstSLI GKGCMC 1 cut(s) 435
BstUI CGCG 3 cut(s) 41, 458, 829
BstV2I GAAGAC 4 cut(s) 597, 729, 870, 923
BstX2I RGATCY 1 cut(s) 616
BstYI RGATCY 1 cut(s) 616
Bsu15I ATCGAT 1 cut(s) 216
BsuRI GGCC 3 cut(s) 766, 984, 1023
BsuTUI ATCGAT 1 cut(s) 216
BtsCI GGATG 5 cut(s) 119, 185, 270, 343, 712
BveI ACCTGC 1 cut(s) 1185
Cac8I GCNNGC 1 cut(s) 764
Cfr10I RCCGGY 1 cut(s) 1059
Cfr13I GGNCC 1 cut(s) 1021
ClaI ATCGAT 1 cut(s) 216
CseI GACGC 2 cut(s) 47, 818
Csp6I GTAC 3 cut(s) 460, 736, 1072
CspAI ACCGGT 1 cut(s) 1059
CviAII CATG 4 cut(s) 239, 562, 670, 780
CviJI RGCY 9 cut(s) 61, 115, 408, 664, 766, 937, 984, 1023, 1038
CviKI_1 RGCY 9 cut(s) 61, 115, 408, 664, 766, 937, 984, 1023, 1038
CviQI GTAC 3 cut(s) 460, 736, 1072
DdeI CTNAG 6 cut(s) 111, 153, 287, 857, 1017, 1085
DpnI GATC 8 cut(s) 9, 98, 210, 297, 308, 360, 618, 927
DpnII GATC 8 cut(s) 7, 96, 208, 295, 306, 358, 616, 925
DriI GACNNNNNGTC 2 cut(s) 53, 409
EaeI YGGCCR 1 cut(s) 764
Eam1104I CTCTTC 1 cut(s) 154
Eam1105I GACNNNNNGTC 2 cut(s) 53, 409
EarI CTCTTC 1 cut(s) 154
Eco130I CCWWGG 2 cut(s) 424, 679
Eco147I AGGCCT 1 cut(s) 984
Eco57I CTGAAG 2 cut(s) 741, 917
EcoNI CCTNNNNNAGG 1 cut(s) 989
EcoO109I RGGNCCY 1 cut(s) 1021
EcoRI GAATTC 1 cut(s) 512
EcoRII CCWGG 1 cut(s) 1052
EcoT14I CCWWGG 2 cut(s) 424, 679
ErhI CCWWGG 2 cut(s) 424, 679
FaeI CATG 4 cut(s) 242, 565, 673, 783
FaqI GGGAC 2 cut(s) 761, 836
FatI CATG 4 cut(s) 238, 561, 669, 779
FauI CCCGC 1 cut(s) 897
FauNDI CATATG 1 cut(s) 748
FbaI TGATCA 2 cut(s) 306, 358
FblI GTMKAC 1 cut(s) 832
Fnu4HI GCNGC 1 cut(s) 1036
FokI GGATG 5 cut(s) 106, 172, 277, 350, 719
Fsp4HI GCNGC 1 cut(s) 1036
FspBI CTAG 2 cut(s) 327, 425
GluI GCNGC 1 cut(s) 1036
GsuI CTGGAG 2 cut(s) 756, 1036
HaeIII GGCC 3 cut(s) 766, 984, 1023
HapII CCGG 3 cut(s) 584, 820, 1060
HgaI GACGC 2 cut(s) 47, 818
Hin1II CATG 4 cut(s) 242, 565, 673, 783
HincII GTYRAC 1 cut(s) 833
HindII GTYRAC 1 cut(s) 833
HinfI GANTC 4 cut(s) 173, 769, 824, 1208
HpaII CCGG 3 cut(s) 584, 820, 1060
HphI GGTGA 2 cut(s) 353, 1018
Hpy166II GTNNAC 3 cut(s) 433, 557, 833
Hpy188I TCNGA 4 cut(s) 103, 154, 363, 403
Hpy188III TCNNGA 8 cut(s) 206, 304, 448, 545, 584, 699, 923, 1224
Hpy8I GTNNAC 3 cut(s) 433, 557, 833
Hpy99I CGWCG 4 cut(s) 467, 509, 834, 910
HpyAV CCTTC 7 cut(s) 310, 432, 852, 874, 903, 909, 1109
HpyCH4III ACNGT 4 cut(s) 55, 160, 554, 1030
HpyCH4V TGCA 3 cut(s) 81, 139, 433
HpyF10VI GCNNNNNNNGC 3 cut(s) 67, 738, 965
HpyF3I CTNAG 6 cut(s) 111, 153, 287, 857, 1017, 1085
Hsp92II CATG 4 cut(s) 242, 565, 673, 783
Kpn2I TCCGGA 1 cut(s) 583
Ksp22I TGATCA 2 cut(s) 306, 358
Kzo9I GATC 8 cut(s) 7, 96, 208, 295, 306, 358, 616, 925
LmnI GCTCC 2 cut(s) 942, 1043
MaeI CTAG 2 cut(s) 327, 425
MaeIII GTNAC 1 cut(s) 1088
MalI GATC 8 cut(s) 9, 98, 210, 297, 308, 360, 618, 927
MboI GATC 8 cut(s) 7, 96, 208, 295, 306, 358, 616, 925
MflI RGATCY 1 cut(s) 616
MhlI GDGCHC 1 cut(s) 435
MluI ACGCGT 1 cut(s) 456
MlyI GAGTC 2 cut(s) 763, 818
MmeI TCCRAC 3 cut(s) 147, 270, 1065
MroI TCCGGA 1 cut(s) 583
MseI TTAA 5 cut(s) 63, 390, 396, 807, 816
MslI CAYNNNNRTG 1 cut(s) 566
MspI CCGG 3 cut(s) 584, 820, 1060
MspR9I CCNGG 2 cut(s) 821, 1054
Mva1269I GAATGC 1 cut(s) 258
MvaI CCWGG 1 cut(s) 1054
MvnI CGCG 3 cut(s) 41, 458, 829
MwoI GCNNNNNNNGC 3 cut(s) 67, 738, 965
NciI CCSGG 1 cut(s) 821
NdeI CATATG 1 cut(s) 748
NdeII GATC 8 cut(s) 7, 96, 208, 295, 306, 358, 616, 925
NlaIII CATG 4 cut(s) 242, 565, 673, 783
NlaIV GGNNCC 3 cut(s) 618, 1039, 1058
PceI AGGCCT 1 cut(s) 984
PcsI WCGNNNNNNNCGW 2 cut(s) 213, 462
PctI GAATGC 1 cut(s) 258
PfeI GAWTC 2 cut(s) 173, 1208
Pfl23II CGTACG 1 cut(s) 459
PinAI ACCGGT 1 cut(s) 1059
PkrI GCNGC 1 cut(s) 1037
Ple19I CGATCG 1 cut(s) 928
PleI GAGTC 2 cut(s) 763, 818
PpsI GAGTC 2 cut(s) 763, 818
PshAI GACNNNNGTC 2 cut(s) 773, 828
PsiI TTATAA 1 cut(s) 369
Psp6I CCWGG 1 cut(s) 1052
PspGI CCWGG 1 cut(s) 1052
PspLI CGTACG 1 cut(s) 459
PspN4I GGNNCC 3 cut(s) 618, 1039, 1058
PspPI GGNCC 1 cut(s) 1021
PsuI RGATCY 1 cut(s) 616
PvuI CGATCG 1 cut(s) 928
RsaI GTAC 3 cut(s) 461, 737, 1073
RsaNI GTAC 3 cut(s) 460, 736, 1072
RseI CAYNNNNRTG 1 cut(s) 566
SalI GTCGAC 1 cut(s) 831
SaqAI TTAA 5 cut(s) 63, 390, 396, 807, 816
SatI GCNGC 1 cut(s) 1036
Sau3AI GATC 8 cut(s) 7, 96, 208, 295, 306, 358, 616, 925
Sau96I GGNCC 1 cut(s) 1021
SchI GAGTC 2 cut(s) 763, 818
ScrFI CCNGG 2 cut(s) 821, 1054
SduI GDGCHC 1 cut(s) 435
SfcI CTRYAG 1 cut(s) 651
SmiMI CAYNNNNRTG 1 cut(s) 566
SmlI CTYRAG 2 cut(s) 446, 989
SmoI CTYRAG 2 cut(s) 446, 989
SpeI ACTAGT 1 cut(s) 326
SseBI AGGCCT 1 cut(s) 984
SsiI CCGC 4 cut(s) 68, 890, 998, 1035
SspMI CTAG 2 cut(s) 327, 425
StuI AGGCCT 1 cut(s) 984
StyD4I CCNGG 2 cut(s) 819, 1052
StyI CCWWGG 2 cut(s) 424, 679
TaaI ACNGT 4 cut(s) 55, 160, 554, 1030
TaqI TCGA 5 cut(s) 207, 216, 417, 832, 924
TaqII GACCGA 1 cut(s) 403
TauI GCSGC 1 cut(s) 1038
TfiI GAWTC 2 cut(s) 173, 1208
Tru1I TTAA 5 cut(s) 63, 390, 396, 807, 816
Tru9I TTAA 5 cut(s) 63, 390, 396, 807, 816
TspDTI ATGAA 5 cut(s) 227, 360, 505, 645, 658
TspGWI ACGGA 1 cut(s) 450
VneI GTGCAC 1 cut(s) 431
XagI CCTNNNNNAGG 1 cut(s) 989
XapI RAATTY 7 cut(s) 512, 534, 633, 690, 1066, 1160, 1169
XmaJI CCTAGG 1 cut(s) 424
XmiI GTMKAC 1 cut(s) 832
XspI CTAG 2 cut(s) 327, 425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.