Prupe.1G512600_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000216
Physical Location & Seq
Forward (+)
42195522 .. 42199522
4001 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G512600.1

Sequence Viewer

Length: 1722 bp
ATGGCTGAATCGGAAAACCCCCTCCTCAATGAATTCTGTGCTGCCGACGCTGGCGCCGCCGCGCAGTCCCGCCGGCTCCTCATCCGCTTCAAGGGCCCCGGCCCCTGTCCTGTGCCGGACCCCAACGCCGGCCAATGCTTGAAACAGAGCGTCAATGTTTGTAAAAGCTTCAATAGGAACAGAATTGACGACAATGGAATTCAGGAATCTAGTGATGCTAAACATGTTGCTAGATCTGCAAAGATACCCGAGTTCAGCACCAATACTCTTATGAGCTCTAAGCATGACAATGGTTCCATGAAGCTTTTATCTGGATTTGTTGAGCAGAACCAATTCAAGGCCAATACTCTATGCAGGTCGACGAGAGGCGATACTGCTGCCAAAGCAAGGAAGAGAACCCGATTGCCTCTTGGATTGCCGACCTCGAGTAAGTTAAAAAGATCAAAGAGATCATTATCAGCAGAGAGAAGAACATCAATTGATGATCTACCCAACGTTATATTGGCTGAAATCCTATGCCGACTTGCATGCAATAAATATGTTTTCCAGTGCAAAACTGTGTCCAAGCGTTGGTGCACCCTCATCGAAGATCCTTATTTTATTGGCTGCTTTGTAAGAATCCAAAGTTATAAGGGAATTCCAAAGATACGCACTTTGATAACCAAAAGAGCTGTGGAATTCCGTCCTATACAAACTTGGGCGCTCAATATGTTCATGCGTTTCCACCGTTTGATGGAAAAACCAGTTGTTGTAGCGACATATAATGACTTAGTTTTGTGCTGCATGACCGAGGATTATCAACACATATACTACATCTGCAATGCATGCACCATGCAGTATGTTGTACTTCCACCCACCCCAAGTCGATGTCACAAGAGTGTGTGGGTAGGATTCATCTGCAATGTTCCTGACTATAAATGTGAGGAAGATGATTGGAAAGGAAACAACTTCCAGCATAATGTTGAGTGTAGGTACACGGTTGTGAGAATTCTTCCTCCTGTTGAATTTGAAAATGGTGAGAAGAAATGTGATACATTCAAATTAAACGTGGAGATCTTCTCTTCTGACACTGGGGAGTGGAGAGAATCAGTTGTCTCGTCCCCACAGCACTTCAATTTTGGCCGCCTCAAGGAGTTATCCTTTACATACAATGGAATGTTATATTGGTTAACAGAGCAGGACTTTATTGTTATTGGTTTGGGCCCATTCTACGACAATGATGGAACTAGCAGCAGCAACAATAATGGTGATGGTATTATTGATCATAAACTGGGTTTCACCATATTTGAGGAGACTCTAGACTTTGGTTTTATGCTTCAGTACTCAGGTGTGTGCAGAGGATATGTGCTATTGTGCAACATGAGCATGCTCTCCAGAAGTCTGTATGTATATGAGTTGAAACAATCACAAGATGATGGAGGAGCTGCTGCTGGCAAGAAGTTGTATTTGAGTAAACGCAGAGTTTATTCCTTTGATGCTGAAATGATTCCGTTCAAATCGAATATGTTACTGATTGCTTTTGACCCAAGTAATAAGGATATTTTTTATCTGCGTGTGGACGATGATATTATCAAGTGGAATGTTCACACAGGAAAGTGGTCAAAGATATCTAGACACTGGGTAAAACGTTGTGACTATTACACAGTTGTGCTCCCAGGGTGGCCGACCTCAATTCCTAGACTACCCCAGCAGCAGCAGCAGCAGCGTGCCCATCTCTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

574

Amino Acids

65.67

Weight (kDa)

8.92

Isoelectric Point (pI)

48.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000216)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38860 AT5G38860
fragaria_vesca FvH4_2g24261 FvH4_2g24270 FvH4_3g35490 FvH4_6g03181 FvH4_6g03182 FvH4_6g03221 FvH4_6g03380 FvH4_6g05203 FvH4_6g31981 FvH4_6g32061 FvH4_6g37041 FvH4_6g39371 FvH4_6g45291 FvH4_6g45890 FvH4_6g46240 FvH4_6g46241 FvH4_6g46242 FvH4_6g46260 FvH4_6g46280 FvH4_6g46280 FvH4_6g46280 FvH4_6g46290 FvH4_6g46290 FvH4_6g46380
malus_domestica MD02G1008700.v1.1 MD02G1008900.v1.1 MD04G1180900.v1.1 MD04G1181200.v1.1 MD09G1075900.v1.1 MD09G1201600.v1.1 MD15G1017800.v1.1 MD17G1066600.v1.1
prunus_persica Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G512600_v2.0.a1 Prupe.3G059500_v2.0.a1 Prupe.3G059600_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.6G076400_v2.0.a1
pyrus_communis pycom02g00750 pycom03g20320 pycom09g00330 pycom11g08760 pycom17g04880 pycom17g06710 pycom17g19130
rosa_chinensis RchiOBHm_Chr2g0123691 RchiOBHm_Chr2g0164671 RchiOBHm_Chr2g0164681 RchiOBHm_Chr2g0164721 RchiOBHm_Chr2g0164741 RchiOBHm_Chr6g0275871 RchiOBHm_Chr6g0276071 RchiOBHm_Chr6g0291931 RchiOBHm_Chr6g0292091 RchiOBHm_Chr6g0292271 RchiOBHm_Chr7g0221261
rosa_laevigata RLG00000002165 RLG00000007725 RLG00000012062 RLG00000012543 RLG00000013427 RLG00000021441 RLG00000021477 RLG00000021478 RLG00000021480 RLG00000021481
rosa_multiflora Rmu_co8220318.1_g000001 Rmu_co8427407.1_g000001 Rmu_sc0000946.1_g000006 Rmu_sc0000946.1_g000007 Rmu_sc0000946.1_g000010 Rmu_sc0000946.1_g000012 Rmu_sc0000946.1_g000013 Rmu_sc0002030.1_g000015 Rmu_sc0002870.1_g000002 Rmu_sc0003200.1_g000004 Rmu_sc0004915.1_g000002 Rmu_sc0004991.1_g000006 Rmu_sc0006928.1_g000020 Rmu_sc0007384.1_g000001 Rmu_sc0030722.1_g000001 Rmu_sc0030723.1_g000001 Rmu_ssc0000076.1_g000019 Rmu_ssc0000076.1_g000025 Rmu_ssc0000318.1_g000001
rosa_roxburghii Rroxscaffold_2G00086340 Rroxscaffold_2G00086360 Rroxscaffold_2G00086370 Rroxscaffold_2G00086380 Rroxscaffold_2G00086830 Rroxscaffold_2G00087380 Rroxscaffold_2G00120420 Rroxscaffold_7G00175260 Rroxscaffold_7G00175600 Rroxscaffold_7G00177970 Rroxscaffold_7G00192830
rosa_rugosa Rorug02G0247400 Rorug02G0506200 Rorug02G0508300 Rorug02G0509700 Rorug05G0378800 Rorug06G0096600 Rorug06G0096700 Rorug06G0221800
rosa_samantha Rh2AG577600 Rh2AG577700 Rh2AG577800 Rh2AG578000 Rh2AG578100 Rh2BG589200 Rh2CG559800 Rh2DG594400 Rh2DG594500 Rh2DG597800 Rh2DG599400 Rh2DG599500 Rh2DG599600 Rh6AG338400 Rh6BG211200 Rh6BG212600 Rh6BG342900 Rh6BG345600 Rh6CG214800 Rh6CG349100 Rh6CG350600 Rh6CG350700 Rh6CG352600 Rh7AG340800
rosa_wichuraiana Rw1G028590 Rw2G047980 Rw2G047990 Rw5G043360 Rw6G018180 Rw6G029200 Rw6G029450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 630
Acc36I ACCTGC 1 cut(s) 345
AccB1I GGYRCC 1 cut(s) 53
AccB7I CCANNNNNTGG 1 cut(s) 570
AccI GTMKAC 1 cut(s) 359
AccII CGCG 1 cut(s) 62
AciI CCGC 5 cut(s) 57, 60, 70, 85, 1123
AclI AACGTT 2 cut(s) 495, 1627
AclWI GGATC 1 cut(s) 584
AcoI YGGCCR 3 cut(s) 130, 1120, 1661
AcsI RAATTY 6 cut(s) 32, 198, 636, 677, 987, 1004
AcuI CTGAAG 1 cut(s) 1301
AcyI GRCGYC 1 cut(s) 54
AfaI GTAC 3 cut(s) 846, 974, 1322
AfiI CCNNNNNNNGG 7 cut(s) 91, 128, 337, 387, 570, 733, 1129
AflIII ACRYGT 1 cut(s) 223
AjnI CCWGG 1 cut(s) 1654
AjuI GAANNNNNNNTTGG 2 cut(s) 1147, 1179
AleI CACNNNNGTG 3 cut(s) 876, 980, 1646
AluBI AGCT 5 cut(s) 168, 276, 304, 671, 1424
AluI AGCT 5 cut(s) 168, 276, 304, 671, 1424
Alw21I GWGCWC 3 cut(s) 278, 578, 1653
Alw26I GTCTC 2 cut(s) 1099, 1286
Alw44I GTGCAC 1 cut(s) 574
AlwI GGATC 1 cut(s) 584
Ama87I CYCGRG 2 cut(s) 248, 424
AoxI GGCC 7 cut(s) 94, 100, 130, 339, 1120, 1201, 1661
ApaI GGGCCC 2 cut(s) 98, 1205
ApaLI GTGCAC 1 cut(s) 574
ApoI RAATTY 6 cut(s) 32, 198, 636, 677, 987, 1004
Asp700I GAANNNNTTC 2 cut(s) 332, 1485
AspLEI GCGC 3 cut(s) 56, 64, 703
AspS9I GGNCC 6 cut(s) 94, 95, 101, 118, 1201, 1202
AsuC2I CCSGG 1 cut(s) 99
AsuHPI GGTGA 3 cut(s) 1028, 1259, 1270
AvaI CYCGRG 2 cut(s) 248, 424
AvaII GGWCC 1 cut(s) 118
BaeGI GKGCMC 4 cut(s) 98, 578, 1205, 1711
BaeI ACNNNNGTAYC 2 cut(s) 236, 269
BanI GGYRCC 1 cut(s) 53
BanII GRGCYC 3 cut(s) 98, 278, 1205
Bbv12I GWGCWC 3 cut(s) 278, 578, 1653
BccI CCATC 5 cut(s) 727, 1214, 1244, 1409, 1719
BcgI CGANNNNNNTGC 6 cut(s) 359, 393, 510, 544, 565, 599
BciT130I CCWGG 1 cut(s) 1656
BclI TGATCA 1 cut(s) 1261
BcnI CCSGG 1 cut(s) 99
BcoDI GTCTC 2 cut(s) 1099, 1286
BfaI CTAG 7 cut(s) 210, 231, 1227, 1298, 1611, 1677, 1720
BfoI RGCGCY 2 cut(s) 57, 704
BfuAI ACCTGC 1 cut(s) 345
BglII AGATCT 2 cut(s) 233, 1053
BmcAI AGTACT 1 cut(s) 1322
Bme1390I CCNGG 2 cut(s) 99, 1656
Bme18I GGWCC 1 cut(s) 118
BmeT110I CYCGRG 2 cut(s) 248, 424
BmgT120I GGNCC 6 cut(s) 94, 95, 101, 118, 1201, 1202
BmiI GGNNCC 8 cut(s) 55, 77, 96, 97, 103, 120, 295, 1203
BmrFI CCNGG 2 cut(s) 99, 1656
BmrI ACTGGG 3 cut(s) 1080, 1280, 1627
BmsI GCATC 2 cut(s) 205, 1465
BmuI ACTGGG 3 cut(s) 1080, 1280, 1627
BplI GAGNNNNNCTC 2 cut(s) 1043, 1075
BpmI CTGGAG 1 cut(s) 1357
BpuEI CTTGAG 1 cut(s) 1112
BpuMI CCSGG 1 cut(s) 99
BsaBI GATNNNNATC 1 cut(s) 454
BsaHI GRCGYC 1 cut(s) 54
BsaJI CCNNGG 4 cut(s) 97, 789, 1654, 1655
Bsc4I CCNNNNNNNGG 7 cut(s) 91, 128, 337, 387, 570, 733, 1129
Bse118I RCCGGY 2 cut(s) 72, 128
Bse1I ACTGG 5 cut(s) 547, 743, 1075, 1275, 1622
Bse3DI GCAATG 2 cut(s) 826, 907
Bse8I GATNNNNATC 1 cut(s) 454
BseBI CCWGG 1 cut(s) 1656
BseDI CCNNGG 4 cut(s) 97, 789, 1654, 1655
BseGI GGATG 1 cut(s) 81
BseJI GATNNNNATC 1 cut(s) 454
BseLI CCNNNNNNNGG 7 cut(s) 91, 128, 337, 387, 570, 733, 1129
BseMI GCAATG 2 cut(s) 826, 907
BseMII CTCAG 1 cut(s) 1338
BseNI ACTGG 5 cut(s) 547, 743, 1075, 1275, 1622
BseRI GAGGAG 4 cut(s) 14, 68, 1304, 1434
BseSI GKGCMC 4 cut(s) 98, 578, 1205, 1711
BseYI CCCAGC 1 cut(s) 1686
BsgI GTGCAG 1 cut(s) 1354
Bsh1236I CGCG 1 cut(s) 62
BshFI GGCC 7 cut(s) 96, 102, 132, 341, 1122, 1203, 1663
BshNI GGYRCC 1 cut(s) 53
BsiHKAI GWGCWC 3 cut(s) 278, 578, 1653
BsiHKCI CYCGRG 2 cut(s) 248, 424
BsiSI CCGG 4 cut(s) 73, 99, 116, 129
BslFI GGGAC 2 cut(s) 52, 1084
BslI CCNNNNNNNGG 7 cut(s) 91, 128, 337, 387, 570, 733, 1129
BsmAI GTCTC 2 cut(s) 1099, 1286
BsmFI GGGAC 2 cut(s) 52, 1084
BsnI GGCC 7 cut(s) 96, 102, 132, 341, 1122, 1203, 1663
BsoBI CYCGRG 2 cut(s) 248, 424
Bsp120I GGGCCC 2 cut(s) 94, 1201
Bsp1286I GDGCHC 6 cut(s) 98, 278, 578, 1205, 1653, 1711
Bsp143I GATC 7 cut(s) 233, 440, 449, 484, 589, 1053, 1261
BspACI CCGC 5 cut(s) 57, 60, 70, 85, 1123
BspANI GGCC 7 cut(s) 96, 102, 132, 341, 1122, 1203, 1663
BspCNI CTCAG 1 cut(s) 1337
BspFNI CGCG 1 cut(s) 62
BspLI GGNNCC 8 cut(s) 55, 77, 96, 97, 103, 120, 295, 1203
BspMI ACCTGC 1 cut(s) 345
BspPI GGATC 1 cut(s) 584
BspT107I GGYRCC 1 cut(s) 53
BsrDI GCAATG 2 cut(s) 826, 907
BsrFI RCCGGY 2 cut(s) 72, 128
BsrI ACTGG 5 cut(s) 547, 743, 1075, 1275, 1622
BssAI RCCGGY 2 cut(s) 72, 128
BssECI CCNNGG 4 cut(s) 97, 789, 1654, 1655
BssMI GATC 7 cut(s) 233, 440, 449, 484, 589, 1053, 1261
BssNI GRCGYC 1 cut(s) 54
Bst2UI CCWGG 1 cut(s) 1656
Bst4CI ACNGT 4 cut(s) 559, 728, 979, 1645
Bst6I CTCTTC 2 cut(s) 386, 1066
BstACI GRCGYC 1 cut(s) 54
BstAPI GCANNNNNTGC 1 cut(s) 825
BstC8I GCNNGC 8 cut(s) 52, 74, 130, 529, 826, 1367, 1432, 1707
BstDEI CTNAG 3 cut(s) 279, 769, 1324
BstF5I GGATG 1 cut(s) 81
BstFNI CGCG 1 cut(s) 62
BstH2I RGCGCY 2 cut(s) 57, 704
BstHHI GCGC 3 cut(s) 56, 64, 703
BstKTI GATC 7 cut(s) 236, 443, 452, 487, 592, 1056, 1264
BstMAI GTCTC 2 cut(s) 1099, 1286
BstMBI GATC 7 cut(s) 233, 440, 449, 484, 589, 1053, 1261
BstNI CCWGG 1 cut(s) 1656
BstNSI RCATGY 4 cut(s) 227, 531, 828, 1369
BstSCI CCNGG 2 cut(s) 97, 1654
BstSLI GKGCMC 4 cut(s) 98, 578, 1205, 1711
BstUI CGCG 1 cut(s) 62
BstX2I RGATCY 3 cut(s) 233, 589, 1053
BstYI RGATCY 3 cut(s) 233, 589, 1053
BsuRI GGCC 7 cut(s) 96, 102, 132, 341, 1122, 1203, 1663
BtsCI GGATG 1 cut(s) 81
BtsIMutI CAGTG 3 cut(s) 554, 1068, 1615
BveI ACCTGC 1 cut(s) 345
Cac8I GCNNGC 8 cut(s) 52, 74, 130, 529, 826, 1367, 1432, 1707
CfoI GCGC 3 cut(s) 56, 64, 703
Cfr10I RCCGGY 2 cut(s) 72, 128
Cfr13I GGNCC 6 cut(s) 94, 95, 101, 118, 1201, 1202
CseI GACGC 2 cut(s) 56, 139
Csp6I GTAC 3 cut(s) 845, 973, 1321
CviQI GTAC 3 cut(s) 845, 973, 1321
DdeI CTNAG 3 cut(s) 279, 769, 1324
DinI GGCGCC 1 cut(s) 55
DpnI GATC 7 cut(s) 235, 442, 451, 486, 591, 1055, 1263
DpnII GATC 7 cut(s) 233, 440, 449, 484, 589, 1053, 1261
EaeI YGGCCR 3 cut(s) 130, 1120, 1661
Eam1104I CTCTTC 2 cut(s) 386, 1066
EarI CTCTTC 2 cut(s) 386, 1066
Ecl136II GAGCTC 1 cut(s) 276
Eco24I GRGCYC 3 cut(s) 98, 278, 1205
Eco32I GATATC 1 cut(s) 1608
Eco47I GGWCC 1 cut(s) 118
Eco53kI GAGCTC 1 cut(s) 276
Eco57I CTGAAG 1 cut(s) 1301
Eco88I CYCGRG 2 cut(s) 248, 424
EcoICRI GAGCTC 1 cut(s) 276
EcoO109I RGGNCCY 2 cut(s) 94, 95
EcoRI GAATTC 5 cut(s) 32, 198, 636, 677, 987
EcoRII CCWGG 1 cut(s) 1654
EcoRV GATATC 1 cut(s) 1608
EcoT22I ATGCAT 1 cut(s) 826
EcoT38I GRGCYC 3 cut(s) 98, 278, 1205
EgeI GGCGCC 1 cut(s) 55
EheI GGCGCC 1 cut(s) 55
FaqI GGGAC 2 cut(s) 52, 1084
FauI CCCGC 1 cut(s) 77
FbaI TGATCA 1 cut(s) 1261
FblI GTMKAC 1 cut(s) 359
FokI GGATG 1 cut(s) 68
FriOI GRGCYC 3 cut(s) 98, 278, 1205
FspBI CTAG 7 cut(s) 210, 231, 1227, 1298, 1611, 1677, 1720
GlaI GCGC 3 cut(s) 55, 63, 702
GsaI CCCAGC 1 cut(s) 1690
GsuI CTGGAG 1 cut(s) 1357
HaeII RGCGCY 2 cut(s) 57, 704
HaeIII GGCC 7 cut(s) 96, 102, 132, 341, 1122, 1203, 1663
HapII CCGG 4 cut(s) 73, 99, 116, 129
HgaI GACGC 2 cut(s) 56, 139
HhaI GCGC 3 cut(s) 56, 64, 703
Hin1I GRCGYC 1 cut(s) 54
Hin6I GCGC 3 cut(s) 54, 62, 701
HinP1I GCGC 3 cut(s) 54, 62, 701
HincII GTYRAC 2 cut(s) 360, 1170
HindII GTYRAC 2 cut(s) 360, 1170
HindIII AAGCTT 2 cut(s) 166, 302
HinfI GANTC 7 cut(s) 8, 206, 618, 891, 1085, 1294, 1486
HpaI GTTAAC 1 cut(s) 1170
HpaII CCGG 4 cut(s) 73, 99, 116, 129
HphI GGTGA 3 cut(s) 1028, 1259, 1270
Hpy166II GTNNAC 7 cut(s) 360, 576, 975, 1170, 1454, 1558, 1585
Hpy188I TCNGA 2 cut(s) 13, 1066
Hpy188III TCNNGA 6 cut(s) 203, 312, 908, 1298, 1374, 1611
Hpy8I GTNNAC 7 cut(s) 360, 576, 975, 1170, 1454, 1558, 1585
Hpy99I CGWCG 2 cut(s) 50, 364
HpyCH4III ACNGT 4 cut(s) 559, 728, 979, 1645
HpyCH4IV ACGT 3 cut(s) 495, 1047, 1627
HpyF3I CTNAG 3 cut(s) 279, 769, 1324
HpySE526I ACGT 3 cut(s) 495, 1047, 1627
Hsp92I GRCGYC 1 cut(s) 54
HspAI GCGC 3 cut(s) 54, 62, 701
KasI GGCGCC 1 cut(s) 53
KroI GCCGGC 2 cut(s) 72, 128
KroNI GCCGGC 2 cut(s) 74, 130
Ksp22I TGATCA 1 cut(s) 1261
KspAI GTTAAC 1 cut(s) 1170
Kzo9I GATC 7 cut(s) 233, 440, 449, 484, 589, 1053, 1261
LmnI GCTCC 3 cut(s) 81, 1421, 1656
LweI GCATC 2 cut(s) 205, 1465
MaeI CTAG 7 cut(s) 210, 231, 1227, 1298, 1611, 1677, 1720
MaeII ACGT 3 cut(s) 495, 1047, 1627
MaeIII GTNAC 3 cut(s) 869, 1506, 1631
MalI GATC 7 cut(s) 235, 442, 451, 486, 591, 1055, 1263
MboI GATC 7 cut(s) 233, 440, 449, 484, 589, 1053, 1261
MboII GAAGA 8 cut(s) 403, 480, 599, 938, 983, 1033, 1048, 1053
MfeI CAATTG 1 cut(s) 477
MflI RGATCY 3 cut(s) 233, 589, 1053
MhlI GDGCHC 6 cut(s) 98, 278, 578, 1205, 1653, 1711
Mly113I GGCGCC 1 cut(s) 54
MlyI GAGTC 1 cut(s) 1288
Mph1103I ATGCAT 1 cut(s) 826
MroNI GCCGGC 2 cut(s) 72, 128
MroXI GAANNNNTTC 2 cut(s) 332, 1485
MseI TTAA 3 cut(s) 434, 1043, 1169
MslI CAYNNNNRTG 5 cut(s) 288, 876, 980, 1364, 1646
MspI CCGG 4 cut(s) 73, 99, 116, 129
MspR9I CCNGG 2 cut(s) 99, 1656
MunI CAATTG 1 cut(s) 477
MvaI CCWGG 1 cut(s) 1656
MvnI CGCG 1 cut(s) 62
NaeI GCCGGC 2 cut(s) 74, 130
NarI GGCGCC 1 cut(s) 54
NciI CCSGG 1 cut(s) 99
NdeII GATC 7 cut(s) 233, 440, 449, 484, 589, 1053, 1261
NgoMIV GCCGGC 2 cut(s) 72, 128
NlaIV GGNNCC 8 cut(s) 55, 77, 96, 97, 103, 120, 295, 1203
NmuCI GTSAC 2 cut(s) 869, 1631
NsiI ATGCAT 1 cut(s) 826
NspI RCATGY 4 cut(s) 227, 531, 828, 1369
OliI CACNNNNGTG 3 cut(s) 876, 980, 1646
PaeI GCATGC 3 cut(s) 531, 828, 1369
PaeR7I CTCGAG 1 cut(s) 424
PasI CCCWGGG 1 cut(s) 1655
PciI ACATGT 1 cut(s) 223
PdiI GCCGGC 2 cut(s) 74, 130
PdmI GAANNNNTTC 2 cut(s) 332, 1485
PfeI GAWTC 6 cut(s) 8, 206, 618, 891, 1085, 1486
PflMI CCANNNNNTGG 1 cut(s) 570
PleI GAGTC 1 cut(s) 1288
PluTI GGCGCC 1 cut(s) 57
PpsI GAGTC 1 cut(s) 1288
PscI ACATGT 1 cut(s) 223
PsiI TTATAA 1 cut(s) 630
Psp124BI GAGCTC 1 cut(s) 278
Psp1406I AACGTT 2 cut(s) 495, 1627
Psp6I CCWGG 1 cut(s) 1654
PspFI CCCAGC 1 cut(s) 1686
PspGI CCWGG 1 cut(s) 1654
PspN4I GGNNCC 8 cut(s) 55, 77, 96, 97, 103, 120, 295, 1203
PspOMI GGGCCC 2 cut(s) 94, 1201
PspPI GGNCC 6 cut(s) 94, 95, 101, 118, 1201, 1202
PspXI VCTCGAGB 1 cut(s) 424
PsuI RGATCY 3 cut(s) 233, 589, 1053
RsaI GTAC 3 cut(s) 846, 974, 1322
RsaNI GTAC 3 cut(s) 845, 973, 1321
RseI CAYNNNNRTG 5 cut(s) 288, 876, 980, 1364, 1646
SacI GAGCTC 1 cut(s) 278
SalI GTCGAC 1 cut(s) 358
SaqAI TTAA 3 cut(s) 434, 1043, 1169
Sau3AI GATC 7 cut(s) 233, 440, 449, 484, 589, 1053, 1261
Sau96I GGNCC 6 cut(s) 94, 95, 101, 118, 1201, 1202
ScaI AGTACT 1 cut(s) 1322
SchI GAGTC 1 cut(s) 1288
ScrFI CCNGG 2 cut(s) 99, 1656
SduI GDGCHC 6 cut(s) 98, 278, 578, 1205, 1653, 1711
SfaNI GCATC 2 cut(s) 205, 1465
SfoI GGCGCC 1 cut(s) 55
Sfr274I CTCGAG 1 cut(s) 424
SinI GGWCC 1 cut(s) 118
SlaI CTCGAG 1 cut(s) 424
SmiMI CAYNNNNRTG 5 cut(s) 288, 876, 980, 1364, 1646
SmlI CTYRAG 2 cut(s) 424, 1127
SmoI CTYRAG 2 cut(s) 424, 1127
SphI GCATGC 3 cut(s) 531, 828, 1369
SsiI CCGC 5 cut(s) 57, 60, 70, 85, 1123
SspDI GGCGCC 1 cut(s) 53
SspMI CTAG 7 cut(s) 210, 231, 1227, 1298, 1611, 1677, 1720
SstI GAGCTC 1 cut(s) 278
StyD4I CCNGG 2 cut(s) 97, 1654
TaaI ACNGT 4 cut(s) 559, 728, 979, 1645
TaiI ACGT 3 cut(s) 498, 1050, 1630
TaqI TCGA 5 cut(s) 359, 425, 585, 865, 1499
TaqII GACCGA 1 cut(s) 803
TatI WGTACW 2 cut(s) 844, 1320
TauI GCSGC 3 cut(s) 59, 62, 1125
TfiI GAWTC 6 cut(s) 8, 206, 618, 891, 1085, 1486
Tru1I TTAA 3 cut(s) 434, 1043, 1169
Tru9I TTAA 3 cut(s) 434, 1043, 1169
TscAI CASTG 3 cut(s) 554, 1075, 1622
TseFI GTSAC 2 cut(s) 869, 1631
Tsp45I GTSAC 2 cut(s) 869, 1631
TspDTI ATGAA 4 cut(s) 45, 314, 703, 883
TspGWI ACGGA 2 cut(s) 671, 1479
TspRI CASTG 3 cut(s) 554, 1075, 1622
Van91I CCANNNNNTGG 1 cut(s) 570
VneI GTGCAC 1 cut(s) 574
VpaK11BI GGWCC 1 cut(s) 118
XapI RAATTY 6 cut(s) 32, 198, 636, 677, 987, 1004
XbaI TCTAGA 2 cut(s) 1297, 1610
XceI RCATGY 4 cut(s) 227, 531, 828, 1369
XcmI CCANNNNNNNNNTGG 2 cut(s) 499, 670
XhoI CTCGAG 1 cut(s) 424
XmiI GTMKAC 1 cut(s) 359
XmnI GAANNNNTTC 2 cut(s) 332, 1485
XspI CTAG 7 cut(s) 210, 231, 1227, 1298, 1611, 1677, 1720
ZrmI AGTACT 1 cut(s) 1322
Zsp2I ATGCAT 1 cut(s) 826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.