Prupe.1G509700_v2.0.a1

unfolded protein binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000216
Physical Location & Seq
Forward (+)
41998686 .. 42001846
3161 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G509700.1

Sequence Viewer

Length: 975 bp
ATGGGTGAATCGGAAAACCCCCTCCTCAATGAATTCGGGGCCTCGCAGTCAACTCCTCCTGAGCCGGCCCCCATCGCCGACCAATGCTTGAAACCGACCCTTGATGATTGCACAAGCTTCAATCGGAACAGAATTGCCGACTATGGAATTCAGACATCTCGTGATGCCAAACGTGTTGCTGGCTCTGCAAAGATATCAGAGTTGAGCAACAAGAACAGAACATTGTCCTCCAATACTCTTATGAGCTCTGAGCAGGAAATTGAATGCGGCGGGGCTTCCATGAAGCTTGCATCTGGATTTCTTAAGCAGAAGCAATTCGAGGAGGACATTCAATGCAGGTTGATTAATTGTGATACTCCTACCAAAGGAAGGAAGAGATCCCAGTCATCTCTTGGATTGCCAACCTCTAGTCAGTTAAAAAGATCAAAGAGATCATCACCAGCAGAAAGAAGACCATCATCAATTGATGATCTCCCTGACACGGCATTGGTTGAAATCCTTTGCCGACTTCCATCAAGTAAATTTGTGTTTCAATGCCAGCGTGTGTCCAAGCGTTGGCGCACACTCGTCTCAGATCCTTATTTTATCGGCCGCTTTGTACATATCCAGAGTTATAGGAAAACTCCAAAGATACTCACTCTGATAAGTAAAAAAGGAGAGGAATTCCCTCCTAAAATGCCATGGCCATCCAAGCTACTAACTCCAGTGTTCGAAAGAATAATGAGTTTCCACCCTTTGATAAGTCAGCTAGTTGTGGTAGCGACGTATAATGACTTAGTTTTGTGCTGCGCAAGTGAGTATTATCCACGCGATTACTACATCTGCAATGCATACACAAGGCAATGGGTTGCTCTTCCTCCTCCCCCAAGTCGATGTCACGATTCATCTGTGATATTCCTTACTATAATTCTAAGAAAGAAGATTGGAAAGGGCATAACGTCCAGCTTAATGCTAAGTGTGTGTGCAACGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000122 GO:0001669 GO:0001846 GO:0001848 GO:0001849 GO:0002376 GO:0002396 GO:0002397 GO:0002474 GO:0002478 GO:0002479 GO:0002501 GO:0002502 GO:0002682 GO:0002684 GO:0002685 GO:0002687 GO:0002688 GO:0002690 GO:0003008 GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003729 GO:0005102 GO:0005178 GO:0005488 GO:0005506 GO:0005509 GO:0005515 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005783 GO:0005788 GO:0005789 GO:0005790 GO:0005793 GO:0005794 GO:0005829 GO:0005844 GO:0005886 GO:0006355 GO:0006357 GO:0006417 GO:0006457 GO:0006611 GO:0006807 GO:0006810 GO:0006873 GO:0006874 GO:0006875 GO:0006886 GO:0006897 GO:0006898 GO:0006906 GO:0006909 GO:0006911 GO:0006913 GO:0006950 GO:0006984 GO:0006986 GO:0006996 GO:0007010 GO:0007044 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0007283 GO:0007399 GO:0007417 GO:0007422 GO:0007507 GO:0007568 GO:0007569 GO:0007588 GO:0007610 GO:0007635 GO:0008104 GO:0008134 GO:0008150 GO:0008152 GO:0008219 GO:0008270 GO:0008284 GO:0009266 GO:0009408 GO:0009605 GO:0009607 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009755 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009897 GO:0009966 GO:0009967 GO:0009968 GO:0009986 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010226 GO:0010324 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010564 GO:0010594 GO:0010595 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0010632 GO:0010634 GO:0010646 GO:0010647 GO:0010648 GO:0010720 GO:0010721 GO:0010769 GO:0010770 GO:0010810 GO:0010811 GO:0010941 GO:0010948 GO:0012501 GO:0012505 GO:0012506 GO:0014070 GO:0014706 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0016050 GO:0016192 GO:0016528 GO:0016529 GO:0017148 GO:0019219 GO:0019222 GO:0019538 GO:0019725 GO:0019882 GO:0019884 GO:0019899 GO:0019953 GO:0022008 GO:0022414 GO:0022417 GO:0022603 GO:0022604 GO:0022607 GO:0023051 GO:0023052 GO:0023056 GO:0023057 GO:0030003 GO:0030029 GO:0030036 GO:0030100 GO:0030139 GO:0030141 GO:0030154 GO:0030155 GO:0030176 GO:0030246 GO:0030334 GO:0030335 GO:0030336 GO:0030421 GO:0030431 GO:0030518 GO:0030522 GO:0030659 GO:0030666 GO:0030670 GO:0030865 GO:0030866 GO:0030968 GO:0031012 GO:0031090 GO:0031224 GO:0031227 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031410 GO:0031581 GO:0031625 GO:0031647 GO:0031958 GO:0031967 GO:0031974 GO:0031975 GO:0031982 GO:0031983 GO:0031984 GO:0032101 GO:0032103 GO:0032268 GO:0032269 GO:0032355 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0032879 GO:0032991 GO:0033036 GO:0033043 GO:0033116 GO:0033143 GO:0033144 GO:0033218 GO:0033365 GO:0033554 GO:0033574 GO:0033993 GO:0034248 GO:0034249 GO:0034329 GO:0034330 GO:0034504 GO:0034613 GO:0034620 GO:0034622 GO:0034975 GO:0034976 GO:0035051 GO:0035257 GO:0035258 GO:0035966 GO:0035967 GO:0036500 GO:0040012 GO:0040013 GO:0040017 GO:0040020 GO:0042048 GO:0042127 GO:0042175 GO:0042221 GO:0042277 GO:0042493 GO:0042562 GO:0042590 GO:0042592 GO:0042692 GO:0042824 GO:0042886 GO:0042921 GO:0042981 GO:0043067 GO:0043167 GO:0043169 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043401 GO:0043900 GO:0043901 GO:0043933 GO:0044085 GO:0044183 GO:0044238 GO:0044322 GO:0044389 GO:0044421 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044432 GO:0044433 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0044703 GO:0044877 GO:0045169 GO:0045184 GO:0045335 GO:0045471 GO:0045595 GO:0045596 GO:0045597 GO:0045664 GO:0045665 GO:0045785 GO:0045786 GO:0045787 GO:0045807 GO:0045892 GO:0045934 GO:0046677 GO:0046872 GO:0046907 GO:0046914 GO:0048002 GO:0048232 GO:0048284 GO:0048385 GO:0048387 GO:0048471 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048545 GO:0048583 GO:0048584 GO:0048585 GO:0048609 GO:0048699 GO:0048731 GO:0048738 GO:0048856 GO:0048869 GO:0048878 GO:0050681 GO:0050764 GO:0050766 GO:0050767 GO:0050768 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050821 GO:0050839 GO:0050896 GO:0050920 GO:0050921 GO:0051049 GO:0051050 GO:0051082 GO:0051087 GO:0051093 GO:0051094 GO:0051128 GO:0051130 GO:0051146 GO:0051168 GO:0051169 GO:0051171 GO:0051172 GO:0051179 GO:0051208 GO:0051234 GO:0051235 GO:0051239 GO:0051240 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051270 GO:0051271 GO:0051272 GO:0051427 GO:0051445 GO:0051604 GO:0051641 GO:0051649 GO:0051704 GO:0051707 GO:0051716 GO:0051726 GO:0051783 GO:0051960 GO:0051961 GO:0055007 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0060205 GO:0060255 GO:0060284 GO:0060537 GO:0060627 GO:0061024 GO:0061025 GO:0061061 GO:0061077 GO:0065003 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0070887 GO:0071156 GO:0071157 GO:0071241 GO:0071248 GO:0071285 GO:0071310 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071556 GO:0071682 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0071944 GO:0072359 GO:0072503 GO:0072507 GO:0080090 GO:0090174 GO:0090398 GO:0097159 GO:0097223 GO:0097305 GO:0097708 GO:0098552 GO:0098553 GO:0098588 GO:0098657 GO:0098771 GO:0098796 GO:0098805 GO:0098827 GO:0099024 GO:0099503 GO:1900024 GO:1900026 GO:1901163 GO:1901164 GO:1901222 GO:1901224 GO:1901363 GO:1901564 GO:1901654 GO:1901700 GO:1902531 GO:1902533 GO:1902679 GO:1903506 GO:1903507 GO:1990668 GO:1990904 GO:2000026 GO:2000112 GO:2000113 GO:2000145 GO:2000146 GO:2000147 GO:2000241 GO:2000242 GO:2000508 GO:2000510 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04141 ko04145 ko04612 ko05142 ko05166 map04141 map04145 map04612 map05142 map05166
Pfam Domains
Protein Families
Calreticulin

Protein Analysis

325

Amino Acids

36.37

Weight (kDa)

9.35

Isoelectric Point (pI)

67.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000216)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38860 AT5G38860
fragaria_vesca FvH4_2g24261 FvH4_2g24270 FvH4_3g35490 FvH4_6g03181 FvH4_6g03182 FvH4_6g03221 FvH4_6g03380 FvH4_6g05203 FvH4_6g31981 FvH4_6g32061 FvH4_6g37041 FvH4_6g39371 FvH4_6g45291 FvH4_6g45890 FvH4_6g46240 FvH4_6g46241 FvH4_6g46242 FvH4_6g46260 FvH4_6g46280 FvH4_6g46280 FvH4_6g46280 FvH4_6g46290 FvH4_6g46290 FvH4_6g46380
malus_domestica MD02G1008700.v1.1 MD02G1008900.v1.1 MD04G1180900.v1.1 MD04G1181200.v1.1 MD09G1075900.v1.1 MD09G1201600.v1.1 MD15G1017800.v1.1 MD17G1066600.v1.1
prunus_persica Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G512600_v2.0.a1 Prupe.3G059500_v2.0.a1 Prupe.3G059600_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.6G076400_v2.0.a1
pyrus_communis pycom02g00750 pycom03g20320 pycom09g00330 pycom11g08760 pycom17g04880 pycom17g06710 pycom17g19130
rosa_chinensis RchiOBHm_Chr2g0123691 RchiOBHm_Chr2g0164671 RchiOBHm_Chr2g0164681 RchiOBHm_Chr2g0164721 RchiOBHm_Chr2g0164741 RchiOBHm_Chr6g0275871 RchiOBHm_Chr6g0276071 RchiOBHm_Chr6g0291931 RchiOBHm_Chr6g0292091 RchiOBHm_Chr6g0292271 RchiOBHm_Chr7g0221261
rosa_laevigata RLG00000002165 RLG00000007725 RLG00000012062 RLG00000012543 RLG00000013427 RLG00000021441 RLG00000021477 RLG00000021478 RLG00000021480 RLG00000021481
rosa_multiflora Rmu_co8220318.1_g000001 Rmu_co8427407.1_g000001 Rmu_sc0000946.1_g000006 Rmu_sc0000946.1_g000007 Rmu_sc0000946.1_g000010 Rmu_sc0000946.1_g000012 Rmu_sc0000946.1_g000013 Rmu_sc0002030.1_g000015 Rmu_sc0002870.1_g000002 Rmu_sc0003200.1_g000004 Rmu_sc0004915.1_g000002 Rmu_sc0004991.1_g000006 Rmu_sc0006928.1_g000020 Rmu_sc0007384.1_g000001 Rmu_sc0030722.1_g000001 Rmu_sc0030723.1_g000001 Rmu_ssc0000076.1_g000019 Rmu_ssc0000076.1_g000025 Rmu_ssc0000318.1_g000001
rosa_roxburghii Rroxscaffold_2G00086340 Rroxscaffold_2G00086360 Rroxscaffold_2G00086370 Rroxscaffold_2G00086380 Rroxscaffold_2G00086830 Rroxscaffold_2G00087380 Rroxscaffold_2G00120420 Rroxscaffold_7G00175260 Rroxscaffold_7G00175600 Rroxscaffold_7G00177970 Rroxscaffold_7G00192830
rosa_rugosa Rorug02G0247400 Rorug02G0506200 Rorug02G0508300 Rorug02G0509700 Rorug05G0378800 Rorug06G0096600 Rorug06G0096700 Rorug06G0221800
rosa_samantha Rh2AG577600 Rh2AG577700 Rh2AG577800 Rh2AG578000 Rh2AG578100 Rh2BG589200 Rh2CG559800 Rh2DG594400 Rh2DG594500 Rh2DG597800 Rh2DG599400 Rh2DG599500 Rh2DG599600 Rh6AG338400 Rh6BG211200 Rh6BG212600 Rh6BG342900 Rh6BG345600 Rh6CG214800 Rh6CG349100 Rh6CG350600 Rh6CG350700 Rh6CG352600 Rh7AG340800
rosa_wichuraiana Rw1G028590 Rw2G047980 Rw2G047990 Rw5G043360 Rw6G018180 Rw6G029200 Rw6G029450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 790
Acc36I ACCTGC 1 cut(s) 327
AccB7I CCANNNNNTGG 1 cut(s) 555
AccII CGCG 1 cut(s) 810
AciI CCGC 3 cut(s) 267, 270, 592
AclI AACGTT 1 cut(s) 968
AclWI GGATC 2 cut(s) 372, 569
AcoI YGGCCR 2 cut(s) 589, 683
AcsI RAATTY 4 cut(s) 32, 147, 521, 662
AfaI GTAC 1 cut(s) 600
AfiI CCNNNNNNNGG 4 cut(s) 365, 369, 481, 555
AflII CTTAAG 1 cut(s) 302
AflIII ACRYGT 1 cut(s) 172
AgsI TTSAA 6 cut(s) 91, 121, 263, 332, 494, 533
AluBI AGCT 6 cut(s) 117, 246, 286, 694, 748, 945
AluI AGCT 6 cut(s) 117, 246, 286, 694, 748, 945
Alw21I GWGCWC 1 cut(s) 248
Alw26I GTCTC 1 cut(s) 574
AlwI GGATC 2 cut(s) 372, 569
AoxI GGCC 4 cut(s) 39, 66, 589, 683
ApeKI GCWGC 1 cut(s) 786
ApoI RAATTY 4 cut(s) 32, 147, 521, 662
AseI ATTAAT 1 cut(s) 345
Asp700I GAANNNNTTC 1 cut(s) 314
AspLEI GCGC 2 cut(s) 561, 791
AspS9I GGNCC 2 cut(s) 39, 67
AsuHPI GGTGA 2 cut(s) 17, 429
AsuII TTCGAA 1 cut(s) 711
BalI TGGCCA 1 cut(s) 685
BanII GRGCYC 1 cut(s) 248
BauI CACGAG 1 cut(s) 159
BbsI GAAGAC 1 cut(s) 457
Bbv12I GWGCWC 1 cut(s) 248
BbvI GCAGC 1 cut(s) 773
BccI CCATC 4 cut(s) 80, 463, 520, 694
BceAI ACGGC 1 cut(s) 498
BcoDI GTCTC 1 cut(s) 574
BfaI CTAG 2 cut(s) 408, 749
BfrI CTTAAG 1 cut(s) 302
BfuAI ACCTGC 1 cut(s) 327
BisI GCNGC 3 cut(s) 268, 592, 787
BlsI GCNGC 3 cut(s) 269, 593, 788
BmgT120I GGNCC 2 cut(s) 39, 67
BmiI GGNNCC 2 cut(s) 40, 69
BmrI ACTGGG 1 cut(s) 376
BmsI GCATC 2 cut(s) 154, 299
BmuI ACTGGG 1 cut(s) 376
BpiI GAAGAC 1 cut(s) 457
BpmI CTGGAG 1 cut(s) 687
Bpu10I CCTNAGC 1 cut(s) 60
Bpu14I TTCGAA 1 cut(s) 711
BsaJI CCNNGG 1 cut(s) 680
Bsc4I CCNNNNNNNGG 4 cut(s) 365, 369, 481, 555
Bse118I RCCGGY 1 cut(s) 64
Bse1I ACTGG 2 cut(s) 382, 704
Bse3DI GCAATG 2 cut(s) 832, 848
BseDI CCNNGG 1 cut(s) 680
BseGI GGATG 1 cut(s) 686
BseLI CCNNNNNNNGG 4 cut(s) 365, 369, 481, 555
BseMI GCAATG 2 cut(s) 832, 848
BseMII CTCAG 3 cut(s) 51, 240, 585
BseNI ACTGG 2 cut(s) 382, 704
BseRI GAGGAG 4 cut(s) 14, 45, 335, 849
BseX3I CGGCCG 1 cut(s) 589
BseXI GCAGC 1 cut(s) 773
Bsh1236I CGCG 1 cut(s) 810
Bsh1285I CGRYCG 1 cut(s) 592
BshFI GGCC 4 cut(s) 41, 68, 591, 685
BsiEI CGRYCG 1 cut(s) 592
BsiHKAI GWGCWC 1 cut(s) 248
BsiSI CCGG 1 cut(s) 65
BslI CCNNNNNNNGG 4 cut(s) 365, 369, 481, 555
BsmAI GTCTC 1 cut(s) 574
BsmBI CGTCTC 1 cut(s) 574
BsmI GAATGC 1 cut(s) 269
BsnI GGCC 4 cut(s) 41, 68, 591, 685
Bsp119I TTCGAA 1 cut(s) 711
Bsp1286I GDGCHC 1 cut(s) 248
Bsp1407I TGTACA 1 cut(s) 598
Bsp143I GATC 5 cut(s) 377, 422, 431, 469, 574
Bsp19I CCATGG 1 cut(s) 680
BspACI CCGC 3 cut(s) 267, 270, 592
BspANI GGCC 4 cut(s) 41, 68, 591, 685
BspCNI CTCAG 3 cut(s) 52, 241, 584
BspFNI CGCG 1 cut(s) 810
BspLI GGNNCC 2 cut(s) 40, 69
BspMI ACCTGC 1 cut(s) 327
BspPI GGATC 2 cut(s) 372, 569
BspQI GCTCTTC 1 cut(s) 858
BspT104I TTCGAA 1 cut(s) 711
BspTI CTTAAG 1 cut(s) 302
BsrDI GCAATG 2 cut(s) 832, 848
BsrFI RCCGGY 1 cut(s) 64
BsrGI TGTACA 1 cut(s) 598
BsrI ACTGG 2 cut(s) 382, 704
BssAI RCCGGY 1 cut(s) 64
BssECI CCNNGG 1 cut(s) 680
BssMI GATC 5 cut(s) 377, 422, 431, 469, 574
BssSI CACGAG 1 cut(s) 159
BssT1I CCWWGG 1 cut(s) 680
Bst2BI CACGAG 1 cut(s) 159
Bst6I CTCTTC 2 cut(s) 368, 858
BstAFI CTTAAG 1 cut(s) 302
BstAUI TGTACA 1 cut(s) 598
BstBI TTCGAA 1 cut(s) 711
BstC8I GCNNGC 4 cut(s) 66, 181, 288, 539
BstDEI CTNAG 6 cut(s) 60, 249, 571, 775, 911, 953
BstDSI CCRYGG 1 cut(s) 680
BstENI CCTNNNNNAGG 1 cut(s) 363
BstF5I GGATG 1 cut(s) 686
BstFNI CGCG 1 cut(s) 810
BstHHI GCGC 2 cut(s) 561, 791
BstKTI GATC 5 cut(s) 380, 425, 434, 472, 577
BstMAI GTCTC 1 cut(s) 574
BstMBI GATC 5 cut(s) 377, 422, 431, 469, 574
BstMCI CGRYCG 1 cut(s) 592
BstMWI GCNNNNNNNGC 3 cut(s) 74, 185, 691
BstUI CGCG 1 cut(s) 810
BstV1I GCAGC 1 cut(s) 773
BstV2I GAAGAC 1 cut(s) 457
BstX2I RGATCY 2 cut(s) 377, 574
BstYI RGATCY 2 cut(s) 377, 574
BstZI CGGCCG 1 cut(s) 589
BsuRI GGCC 4 cut(s) 41, 68, 591, 685
BtgI CCRYGG 1 cut(s) 680
BtgZI GCGATG 1 cut(s) 58
BtsCI GGATG 1 cut(s) 686
BtsIMutI CAGTG 1 cut(s) 711
BveI ACCTGC 1 cut(s) 327
Cac8I GCNNGC 4 cut(s) 66, 181, 288, 539
CfoI GCGC 2 cut(s) 561, 791
Cfr10I RCCGGY 1 cut(s) 64
Cfr13I GGNCC 2 cut(s) 39, 67
Csp6I GTAC 1 cut(s) 599
CviAII CATG 2 cut(s) 280, 681
CviQI GTAC 1 cut(s) 599
DdeI CTNAG 6 cut(s) 60, 249, 571, 775, 911, 953
DpnI GATC 5 cut(s) 379, 424, 433, 471, 576
DpnII GATC 5 cut(s) 377, 422, 431, 469, 574
EaeI YGGCCR 2 cut(s) 589, 683
EagI CGGCCG 1 cut(s) 589
Eam1104I CTCTTC 2 cut(s) 368, 858
EarI CTCTTC 2 cut(s) 368, 858
Ecl136II GAGCTC 1 cut(s) 246
EclXI CGGCCG 1 cut(s) 589
Eco130I CCWWGG 1 cut(s) 680
Eco24I GRGCYC 1 cut(s) 248
Eco32I GATATC 1 cut(s) 195
Eco52I CGGCCG 1 cut(s) 589
Eco53kI GAGCTC 1 cut(s) 246
EcoICRI GAGCTC 1 cut(s) 246
EcoNI CCTNNNNNAGG 1 cut(s) 363
EcoO109I RGGNCCY 1 cut(s) 39
EcoRI GAATTC 3 cut(s) 32, 147, 662
EcoRV GATATC 1 cut(s) 195
EcoT14I CCWWGG 1 cut(s) 680
EcoT22I ATGCAT 1 cut(s) 832
EcoT38I GRGCYC 1 cut(s) 248
ErhI CCWWGG 1 cut(s) 680
Esp3I CGTCTC 1 cut(s) 574
FaeI CATG 2 cut(s) 283, 684
FatI CATG 2 cut(s) 279, 680
FauI CCCGC 1 cut(s) 263
Fnu4HI GCNGC 3 cut(s) 268, 592, 787
FokI GGATG 1 cut(s) 673
FriOI GRGCYC 1 cut(s) 248
Fsp4HI GCNGC 3 cut(s) 268, 592, 787
FspBI CTAG 2 cut(s) 408, 749
FspI TGCGCA 1 cut(s) 790
GlaI GCGC 2 cut(s) 560, 790
GluI GCNGC 3 cut(s) 268, 592, 787
GsuI CTGGAG 1 cut(s) 687
HaeIII GGCC 4 cut(s) 41, 68, 591, 685
HapII CCGG 1 cut(s) 65
HhaI GCGC 2 cut(s) 561, 791
Hin1II CATG 2 cut(s) 283, 684
Hin6I GCGC 2 cut(s) 559, 789
HinP1I GCGC 2 cut(s) 559, 789
HincII GTYRAC 1 cut(s) 51
HindII GTYRAC 1 cut(s) 51
HindIII AAGCTT 2 cut(s) 115, 284
HinfI GANTC 2 cut(s) 8, 881
HpaII CCGG 1 cut(s) 65
HphI GGTGA 2 cut(s) 17, 429
Hpy166II GTNNAC 1 cut(s) 51
Hpy188I TCNGA 7 cut(s) 13, 126, 153, 199, 250, 574, 642
Hpy188III TCNNGA 5 cut(s) 59, 161, 294, 607, 878
Hpy8I GTNNAC 1 cut(s) 51
Hpy99I CGWCG 1 cut(s) 766
HpyAV CCTTC 1 cut(s) 363
HpyCH4IV ACGT 4 cut(s) 172, 764, 938, 968
HpyCH4V TGCA 7 cut(s) 111, 188, 290, 336, 825, 830, 965
HpyF10VI GCNNNNNNNGC 3 cut(s) 74, 185, 691
HpyF3I CTNAG 6 cut(s) 60, 249, 571, 775, 911, 953
HpySE526I ACGT 4 cut(s) 172, 764, 938, 968
Hsp92II CATG 2 cut(s) 283, 684
HspAI GCGC 2 cut(s) 559, 789
KroI GCCGGC 1 cut(s) 64
KroNI GCCGGC 1 cut(s) 66
Kzo9I GATC 5 cut(s) 377, 422, 431, 469, 574
LguI GCTCTTC 1 cut(s) 858
Lsp1109I GCAGC 1 cut(s) 773
LweI GCATC 2 cut(s) 154, 299
MaeI CTAG 2 cut(s) 408, 749
MaeII ACGT 4 cut(s) 172, 764, 938, 968
MaeIII GTNAC 1 cut(s) 875
MalI GATC 5 cut(s) 379, 424, 433, 471, 576
MboI GATC 5 cut(s) 377, 422, 431, 469, 574
MboII GAAGA 4 cut(s) 385, 462, 845, 931
MfeI CAATTG 1 cut(s) 462
MflI RGATCY 2 cut(s) 377, 574
MhlI GDGCHC 1 cut(s) 248
MlsI TGGCCA 1 cut(s) 685
MluNI TGGCCA 1 cut(s) 685
Mox20I TGGCCA 1 cut(s) 685
Mph1103I ATGCAT 1 cut(s) 832
MroNI GCCGGC 1 cut(s) 64
MroXI GAANNNNTTC 1 cut(s) 314
MscI TGGCCA 1 cut(s) 685
MseI TTAA 4 cut(s) 303, 345, 416, 947
Msp20I TGGCCA 1 cut(s) 685
MspCI CTTAAG 1 cut(s) 302
MspI CCGG 1 cut(s) 65
MunI CAATTG 1 cut(s) 462
Mva1269I GAATGC 1 cut(s) 269
MvnI CGCG 1 cut(s) 810
MwoI GCNNNNNNNGC 3 cut(s) 74, 185, 691
NaeI GCCGGC 1 cut(s) 66
NcoI CCATGG 1 cut(s) 680
NdeII GATC 5 cut(s) 377, 422, 431, 469, 574
NgoMIV GCCGGC 1 cut(s) 64
NlaIII CATG 2 cut(s) 283, 684
NlaIV GGNNCC 2 cut(s) 40, 69
NmuCI GTSAC 1 cut(s) 875
NsbI TGCGCA 1 cut(s) 790
NsiI ATGCAT 1 cut(s) 832
NspV TTCGAA 1 cut(s) 711
PciSI GCTCTTC 1 cut(s) 858
PctI GAATGC 1 cut(s) 269
PdiI GCCGGC 1 cut(s) 66
PdmI GAANNNNTTC 1 cut(s) 314
PfeI GAWTC 2 cut(s) 8, 881
PflMI CCANNNNNTGG 1 cut(s) 555
PkrI GCNGC 3 cut(s) 269, 593, 788
PshBI ATTAAT 1 cut(s) 345
Psp124BI GAGCTC 1 cut(s) 248
Psp1406I AACGTT 1 cut(s) 968
PspN4I GGNNCC 2 cut(s) 40, 69
PspPI GGNCC 2 cut(s) 39, 67
PsuI RGATCY 2 cut(s) 377, 574
RsaI GTAC 1 cut(s) 600
RsaNI GTAC 1 cut(s) 599
SacI GAGCTC 1 cut(s) 248
SapI GCTCTTC 1 cut(s) 858
SaqAI TTAA 4 cut(s) 303, 345, 416, 947
SatI GCNGC 3 cut(s) 268, 592, 787
Sau3AI GATC 5 cut(s) 377, 422, 431, 469, 574
Sau96I GGNCC 2 cut(s) 39, 67
SduI GDGCHC 1 cut(s) 248
SfaNI GCATC 2 cut(s) 154, 299
SfuI TTCGAA 1 cut(s) 711
SmlI CTYRAG 1 cut(s) 302
SmoI CTYRAG 1 cut(s) 302
SsiI CCGC 3 cut(s) 267, 270, 592
SspMI CTAG 2 cut(s) 408, 749
SstI GAGCTC 1 cut(s) 248
StyI CCWWGG 1 cut(s) 680
TaiI ACGT 4 cut(s) 175, 767, 941, 971
TaqI TCGA 3 cut(s) 318, 711, 871
TatI WGTACW 1 cut(s) 598
TauI GCSGC 2 cut(s) 270, 594
TfiI GAWTC 2 cut(s) 8, 881
Tru1I TTAA 4 cut(s) 303, 345, 416, 947
Tru9I TTAA 4 cut(s) 303, 345, 416, 947
TscAI CASTG 1 cut(s) 711
TseFI GTSAC 1 cut(s) 875
TseI GCWGC 1 cut(s) 786
Tsp45I GTSAC 1 cut(s) 875
TspDTI ATGAA 3 cut(s) 45, 296, 873
TspRI CASTG 1 cut(s) 711
Van91I CCANNNNNTGG 1 cut(s) 555
Vha464I CTTAAG 1 cut(s) 302
VspI ATTAAT 1 cut(s) 345
XagI CCTNNNNNAGG 1 cut(s) 363
XapI RAATTY 4 cut(s) 32, 147, 521, 662
XcmI CCANNNNNNNNNTGG 1 cut(s) 389
XmnI GAANNNNTTC 1 cut(s) 314
XspI CTAG 2 cut(s) 408, 749
Zsp2I ATGCAT 1 cut(s) 832
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.