RchiOBHm_Chr7g0221261

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000216
Physical Location & Seq
Reverse (-)
42191854 .. 42193227
1374 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19797

Sequence Viewer

Length: 1374 bp
ATGAGCGGTGGTGGTGATAGTTTTCCTGCTGCTTCAAAAAGAACTTTCTTTCGAGCTCTGAATGGTACTAGTATTGATAATCTCCCCGATGAGGTATTGATTGAAATCCTTTGTCGACTTCCTTGCTACAAATTCGTTTCTCAATGCAAGTTTGTGTCCAACCGCTGGTGCACTCTCACATCCAATCCTCTCTTTATTCGCCGGTTTCTAAGTCTCCAAAGTGATCGTAAGACAAACCGTACCCTGATAAACAGAAGGGGAGAAGAGTTCCTTAATAGAATGTCTTCGTCCTCTCAGCCGCTAAGTCCATTGTTCAAAAGAATTATGAGTTTCCATGGTCTGAAAGAAGAGCCGGTCGTGGAAGGTACATATAATGACCTAGTTTTGTGCTGCGCAAGCAAATATGAACAACGTGATTACTACATCTGCAATCCATACACAATGCAATGGCTTCCTCTTCCTCCCCCACCTCAACTAGTCCATTATGCGCCGGTGGGATTTACCTGCGATCTTCGCTATTATAACTGCAACAAAGAAAATGAGGTCCAGCTTAATGCCGAGTATCGGTGTGTTGTAGTGAGATTGATCTTGCCTTGTGGTCAGCGATTTTCATGCAAATTCAAAGTGCAGCTATTCTCTTCCGAGACTGGTGAATGGAAAGAGTCAATTGTATCATCCCCATCGCCTGTTGGTGTTGAGATTGCTATCGATCGTAAGGTAATATCACCGTTCGCTTACAAGGGAATGCTATTTTGGGGTGATTTTGGCTGTGAACGCCGTTTTCTTATTGGATTGGATCCCTTCATGATCAACAGCACTATTAGTACTAATGGTGGTGATACAATTGATCACTATAAATGCCGTTTTATAGAATTCAGACATGACTTTTCTCCCCCAGTGAGGTGCCTGGGTGAGTACAGAGGTTGTTTGCGCATGGGCAGCCCCAATAGTGAAGGTCTTTTTACTTTTCACGATTTGACTGAAGAAGAAACGCATGGTGCACGACGTGCAATTGTGAAATATTTGAAATTGGAAACTATAAAGAACTTTCACTTCATGACCACTGCAATGTATCATGGGCATTACTGTTATTTTCAGGTGCTGGCTATTGATCCGAATAATGAAGATATCTTGTATGTCCAAAAACTTGATGATGAATTAGATGGCAAGCAAGACGGAGACATTTTCAGGTGCAACATTACTACAAATGGGTACTCCAGGATAAATTGCTTCCCGATAGATGAAAAGCATCGAATTGAGTTGTCGTATGTCCACTTCCCACTTGTTGTGCCATGGTGGCCGACACCACTTCCTAGACTACCACAACACATGCGCGCAGCCCACCTGAATCCTCAATCTTCATGGAACCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

457

Amino Acids

52.92

Weight (kDa)

8.02

Isoelectric Point (pI)

55.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 25 - 69 3.7e-06 F-box-like
b-prop_At3g26010-like PF24750 122 - 380 1.4e-07 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000216)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38860 AT5G38860
fragaria_vesca FvH4_2g24261 FvH4_2g24270 FvH4_3g35490 FvH4_6g03181 FvH4_6g03182 FvH4_6g03221 FvH4_6g03380 FvH4_6g05203 FvH4_6g31981 FvH4_6g32061 FvH4_6g37041 FvH4_6g39371 FvH4_6g45291 FvH4_6g45890 FvH4_6g46240 FvH4_6g46241 FvH4_6g46242 FvH4_6g46260 FvH4_6g46280 FvH4_6g46280 FvH4_6g46280 FvH4_6g46290 FvH4_6g46290 FvH4_6g46380
malus_domestica MD02G1008700.v1.1 MD02G1008900.v1.1 MD04G1180900.v1.1 MD04G1181200.v1.1 MD09G1075900.v1.1 MD09G1201600.v1.1 MD15G1017800.v1.1 MD17G1066600.v1.1
prunus_persica Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G512600_v2.0.a1 Prupe.3G059500_v2.0.a1 Prupe.3G059600_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.6G076400_v2.0.a1
pyrus_communis pycom02g00750 pycom03g20320 pycom09g00330 pycom11g08760 pycom17g04880 pycom17g06710 pycom17g19130
rosa_chinensis RchiOBHm_Chr2g0123691 RchiOBHm_Chr2g0164671 RchiOBHm_Chr2g0164681 RchiOBHm_Chr2g0164721 RchiOBHm_Chr2g0164741 RchiOBHm_Chr6g0275871 RchiOBHm_Chr6g0276071 RchiOBHm_Chr6g0291931 RchiOBHm_Chr6g0292091 RchiOBHm_Chr6g0292271 RchiOBHm_Chr7g0221261
rosa_laevigata RLG00000002165 RLG00000007725 RLG00000012062 RLG00000012543 RLG00000013427 RLG00000021441 RLG00000021477 RLG00000021478 RLG00000021480 RLG00000021481
rosa_multiflora Rmu_co8220318.1_g000001 Rmu_co8427407.1_g000001 Rmu_sc0000946.1_g000006 Rmu_sc0000946.1_g000007 Rmu_sc0000946.1_g000010 Rmu_sc0000946.1_g000012 Rmu_sc0000946.1_g000013 Rmu_sc0002030.1_g000015 Rmu_sc0002870.1_g000002 Rmu_sc0003200.1_g000004 Rmu_sc0004915.1_g000002 Rmu_sc0004991.1_g000006 Rmu_sc0006928.1_g000020 Rmu_sc0007384.1_g000001 Rmu_sc0030722.1_g000001 Rmu_sc0030723.1_g000001 Rmu_ssc0000076.1_g000019 Rmu_ssc0000076.1_g000025 Rmu_ssc0000318.1_g000001
rosa_roxburghii Rroxscaffold_2G00086340 Rroxscaffold_2G00086360 Rroxscaffold_2G00086370 Rroxscaffold_2G00086380 Rroxscaffold_2G00086830 Rroxscaffold_2G00087380 Rroxscaffold_2G00120420 Rroxscaffold_7G00175260 Rroxscaffold_7G00175600 Rroxscaffold_7G00177970 Rroxscaffold_7G00192830
rosa_rugosa Rorug02G0247400 Rorug02G0506200 Rorug02G0508300 Rorug02G0509700 Rorug05G0378800 Rorug06G0096600 Rorug06G0096700 Rorug06G0221800
rosa_samantha Rh2AG577600 Rh2AG577700 Rh2AG577800 Rh2AG578000 Rh2AG578100 Rh2BG589200 Rh2CG559800 Rh2DG594400 Rh2DG594500 Rh2DG597800 Rh2DG599400 Rh2DG599500 Rh2DG599600 Rh6AG338400 Rh6BG211200 Rh6BG212600 Rh6BG342900 Rh6BG345600 Rh6CG214800 Rh6CG349100 Rh6CG350600 Rh6CG350700 Rh6CG352600 Rh7AG340800
rosa_wichuraiana Rw1G028590 Rw2G047980 Rw2G047990 Rw5G043360 Rw6G018180 Rw6G029200 Rw6G029450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 522
Acc16I TGCGCA 2 cut(s) 394, 932
Acc36I ACCTGC 1 cut(s) 512
AccB1I GGYRCC 1 cut(s) 903
AccB7I CCANNNNNTGG 1 cut(s) 165
AccBSI CCGCTC 1 cut(s) 6
AccI GTMKAC 1 cut(s) 115
AccII CGCG 1 cut(s) 1335
AciI CCGC 3 cut(s) 6, 163, 299
AclWI GGATC 3 cut(s) 791, 804, 1106
AcoI YGGCCR 1 cut(s) 1298
AcsI RAATTY 3 cut(s) 131, 617, 872
AcuI CTGAAG 1 cut(s) 1002
AdeI CACNNNGTG 1 cut(s) 1007
AfaI GTAC 6 cut(s) 67, 241, 367, 826, 917, 1214
AfiI CCNNNNNNNGG 4 cut(s) 91, 165, 564, 900
AgsI TTSAA 5 cut(s) 36, 104, 316, 622, 1027
AhlI ACTAGT 2 cut(s) 68, 475
AjiI CACGTC 1 cut(s) 1007
AjnI CCWGG 2 cut(s) 906, 1217
AjuI GAANNNNNNNTTGG 2 cut(s) 736, 768
AluBI AGCT 3 cut(s) 56, 550, 631
AluI AGCT 3 cut(s) 56, 550, 631
Alw21I GWGCWC 3 cut(s) 58, 173, 1003
Alw26I GTCTC 3 cut(s) 218, 638, 1173
Alw44I GTGCAC 2 cut(s) 169, 999
AlwI GGATC 3 cut(s) 791, 804, 1106
AlwNI CAGNNNCTG 1 cut(s) 1102
AoxI GGCC 1 cut(s) 1298
ApaLI GTGCAC 2 cut(s) 169, 999
ApeKI GCWGC 5 cut(s) 29, 390, 628, 939, 1337
ApoI RAATTY 3 cut(s) 131, 617, 872
Asp700I GAANNNNTTC 1 cut(s) 283
AspLEI GCGC 5 cut(s) 395, 490, 933, 1335, 1337
AspS9I GGNCC 1 cut(s) 544
AsuHPI GGTGA 6 cut(s) 26, 662, 717, 770, 848, 923
AvaII GGWCC 1 cut(s) 544
BaeGI GKGCMC 2 cut(s) 173, 1003
BamHI GGATCC 1 cut(s) 796
BanI GGYRCC 1 cut(s) 903
BanII GRGCYC 1 cut(s) 58
BarI GAAGNNNNNNTAC 2 cut(s) 1259, 1291
BbsI GAAGAC 1 cut(s) 276
Bbv12I GWGCWC 3 cut(s) 58, 173, 1003
BbvI GCAGC 5 cut(s) 16, 377, 640, 951, 1349
BccI CCATC 2 cut(s) 688, 1157
BceAI ACGGC 2 cut(s) 762, 846
BcgI CGANNNNNNTGC 4 cut(s) 105, 139, 594, 628
BciT130I CCWGG 2 cut(s) 908, 1219
BclI TGATCA 2 cut(s) 807, 847
BcoDI GTCTC 3 cut(s) 218, 638, 1173
BcuI ACTAGT 2 cut(s) 68, 475
BfaI CTAG 4 cut(s) 69, 380, 476, 1314
BfuAI ACCTGC 1 cut(s) 512
BglI GCCNNNNNGGC 1 cut(s) 1297
BisI GCNGC 6 cut(s) 30, 299, 391, 629, 940, 1338
BlsI GCNGC 6 cut(s) 31, 300, 392, 630, 941, 1339
BmcAI AGTACT 1 cut(s) 826
Bme1390I CCNGG 2 cut(s) 908, 1219
Bme18I GGWCC 1 cut(s) 544
BmgBI CACGTC 1 cut(s) 1007
BmgT120I GGNCC 1 cut(s) 544
BmiI GGNNCC 3 cut(s) 798, 905, 1367
BmrFI CCNGG 2 cut(s) 908, 1219
BmrI ACTGGG 1 cut(s) 890
BmsI GCATC 1 cut(s) 1258
BmuI ACTGGG 1 cut(s) 890
BpiI GAAGAC 1 cut(s) 276
BpmI CTGGAG 1 cut(s) 1201
Bsa29I ATCGAT 1 cut(s) 708
BsaBI GATNNNNATC 2 cut(s) 104, 704
BsaJI CCNNGG 3 cut(s) 334, 907, 1292
Bsc4I CCNNNNNNNGG 4 cut(s) 91, 165, 564, 900
Bse118I RCCGGY 3 cut(s) 201, 352, 490
Bse1I ACTGG 2 cut(s) 652, 896
Bse3DI GCAATG 2 cut(s) 452, 1074
Bse8I GATNNNNATC 2 cut(s) 104, 704
BseBI CCWGG 2 cut(s) 908, 1219
BseCI ATCGAT 1 cut(s) 708
BseDI CCNNGG 3 cut(s) 334, 907, 1292
BseGI GGATG 2 cut(s) 179, 674
BseJI GATNNNNATC 2 cut(s) 104, 704
BseLI CCNNNNNNNGG 4 cut(s) 91, 165, 564, 900
BseMI GCAATG 2 cut(s) 452, 1074
BseMII CTCAG 1 cut(s) 308
BseNI ACTGG 2 cut(s) 652, 896
BsePI GCGCGC 1 cut(s) 1333
BseSI GKGCMC 2 cut(s) 173, 1003
BseXI GCAGC 5 cut(s) 16, 377, 640, 951, 1349
BsgI GTGCAG 1 cut(s) 647
Bsh1236I CGCG 1 cut(s) 1335
Bsh1285I CGRYCG 2 cut(s) 357, 712
BshFI GGCC 1 cut(s) 1300
BshNI GGYRCC 1 cut(s) 903
BshVI ATCGAT 1 cut(s) 708
BsiEI CGRYCG 2 cut(s) 357, 712
BsiHKAI GWGCWC 3 cut(s) 58, 173, 1003
BsiSI CCGG 3 cut(s) 202, 353, 491
BslI CCNNNNNNNGG 4 cut(s) 91, 165, 564, 900
BsmAI GTCTC 3 cut(s) 218, 638, 1173
BsmI GAATGC 1 cut(s) 750
BsnI GGCC 1 cut(s) 1300
Bsp1286I GDGCHC 3 cut(s) 58, 173, 1003
Bsp143I GATC 8 cut(s) 223, 508, 585, 709, 796, 807, 847, 1111
Bsp19I CCATGG 2 cut(s) 334, 1292
BspACI CCGC 3 cut(s) 6, 163, 299
BspANI GGCC 1 cut(s) 1300
BspCNI CTCAG 1 cut(s) 307
BspDI ATCGAT 1 cut(s) 708
BspFNI CGCG 1 cut(s) 1335
BspHI TCATGA 2 cut(s) 804, 1056
BspLI GGNNCC 3 cut(s) 798, 905, 1367
BspMI ACCTGC 1 cut(s) 512
BspPI GGATC 3 cut(s) 791, 804, 1106
BspQI GCTCTTC 1 cut(s) 342
BspT107I GGYRCC 1 cut(s) 903
BsrBI CCGCTC 1 cut(s) 6
BsrDI GCAATG 2 cut(s) 452, 1074
BsrFI RCCGGY 3 cut(s) 201, 352, 490
BsrI ACTGG 2 cut(s) 652, 896
BssAI RCCGGY 3 cut(s) 201, 352, 490
BssECI CCNNGG 3 cut(s) 334, 907, 1292
BssHII GCGCGC 1 cut(s) 1333
BssMI GATC 8 cut(s) 223, 508, 585, 709, 796, 807, 847, 1111
BssT1I CCWWGG 2 cut(s) 334, 1292
Bst2UI CCWGG 2 cut(s) 908, 1219
Bst4CI ACNGT 3 cut(s) 239, 729, 1088
Bst6I CTCTTC 4 cut(s) 258, 342, 462, 643
BstAPI GCANNNNNTGC 1 cut(s) 1007
BstC8I GCNNGC 4 cut(s) 397, 1104, 1169, 1335
BstDEI CTNAG 3 cut(s) 209, 294, 302
BstDSI CCRYGG 2 cut(s) 334, 1292
BstF5I GGATG 2 cut(s) 179, 674
BstFNI CGCG 1 cut(s) 1335
BstHHI GCGC 5 cut(s) 395, 490, 933, 1335, 1337
BstKTI GATC 8 cut(s) 226, 511, 588, 712, 799, 810, 850, 1114
BstMAI GTCTC 3 cut(s) 218, 638, 1173
BstMBI GATC 8 cut(s) 223, 508, 585, 709, 796, 807, 847, 1111
BstMCI CGRYCG 2 cut(s) 357, 712
BstMWI GCNNNNNNNGC 6 cut(s) 396, 513, 774, 939, 1007, 1297
BstNI CCWGG 2 cut(s) 908, 1219
BstNSI RCATGY 1 cut(s) 1333
BstSCI CCNGG 2 cut(s) 906, 1217
BstSLI GKGCMC 2 cut(s) 173, 1003
BstUI CGCG 1 cut(s) 1335
BstV1I GCAGC 5 cut(s) 16, 377, 640, 951, 1349
BstV2I GAAGAC 1 cut(s) 276
BstX2I RGATCY 1 cut(s) 796
BstYI RGATCY 1 cut(s) 796
Bsu15I ATCGAT 1 cut(s) 708
BsuRI GGCC 1 cut(s) 1300
BsuTUI ATCGAT 1 cut(s) 708
BtgI CCRYGG 2 cut(s) 334, 1292
BtgZI GCGATG 1 cut(s) 666
BtrI CACGTC 1 cut(s) 1007
BtsCI GGATG 2 cut(s) 179, 674
BtsI GCAGTG 1 cut(s) 1062
BtsIMutI CAGTG 2 cut(s) 903, 1062
BveI ACCTGC 1 cut(s) 512
Cac8I GCNNGC 4 cut(s) 397, 1104, 1169, 1335
CaiI CAGNNNCTG 1 cut(s) 1102
CciI TCATGA 2 cut(s) 804, 1056
CfoI GCGC 5 cut(s) 395, 490, 933, 1335, 1337
Cfr10I RCCGGY 3 cut(s) 201, 352, 490
Cfr13I GGNCC 1 cut(s) 544
ClaI ATCGAT 1 cut(s) 708
Csp6I GTAC 6 cut(s) 66, 240, 366, 825, 916, 1213
CviQI GTAC 6 cut(s) 66, 240, 366, 825, 916, 1213
DdeI CTNAG 3 cut(s) 209, 294, 302
DpnI GATC 8 cut(s) 225, 510, 587, 711, 798, 809, 849, 1113
DpnII GATC 8 cut(s) 223, 508, 585, 709, 796, 807, 847, 1111
DraIII CACNNNGTG 1 cut(s) 1007
EaeI YGGCCR 1 cut(s) 1298
Eam1104I CTCTTC 4 cut(s) 258, 342, 462, 643
EarI CTCTTC 4 cut(s) 258, 342, 462, 643
Ecl136II GAGCTC 1 cut(s) 56
Eco130I CCWWGG 2 cut(s) 334, 1292
Eco24I GRGCYC 1 cut(s) 58
Eco32I GATATC 1 cut(s) 1129
Eco47I GGWCC 1 cut(s) 544
Eco53kI GAGCTC 1 cut(s) 56
Eco57I CTGAAG 1 cut(s) 1002
EcoICRI GAGCTC 1 cut(s) 56
EcoRI GAATTC 1 cut(s) 872
EcoRII CCWGG 2 cut(s) 906, 1217
EcoRV GATATC 1 cut(s) 1129
EcoT14I CCWWGG 2 cut(s) 334, 1292
EcoT38I GRGCYC 1 cut(s) 58
ErhI CCWWGG 2 cut(s) 334, 1292
FalI AAGNNNNNCTT 2 cut(s) 255, 287
FbaI TGATCA 2 cut(s) 807, 847
FblI GTMKAC 1 cut(s) 115
Fnu4HI GCNGC 6 cut(s) 30, 299, 391, 629, 940, 1338
FokI GGATG 2 cut(s) 166, 661
FriOI GRGCYC 1 cut(s) 58
Fsp4HI GCNGC 6 cut(s) 30, 299, 391, 629, 940, 1338
FspBI CTAG 4 cut(s) 69, 380, 476, 1314
FspI TGCGCA 2 cut(s) 394, 932
GlaI GCGC 5 cut(s) 394, 489, 932, 1334, 1336
GluI GCNGC 6 cut(s) 30, 299, 391, 629, 940, 1338
GsuI CTGGAG 1 cut(s) 1201
HaeIII GGCC 1 cut(s) 1300
HapII CCGG 3 cut(s) 202, 353, 491
HhaI GCGC 5 cut(s) 395, 490, 933, 1335, 1337
Hin6I GCGC 5 cut(s) 393, 488, 931, 1333, 1335
HinP1I GCGC 5 cut(s) 393, 488, 931, 1333, 1335
HincII GTYRAC 1 cut(s) 116
HindII GTYRAC 1 cut(s) 116
HinfI GANTC 2 cut(s) 662, 1348
HpaII CCGG 3 cut(s) 202, 353, 491
HphI GGTGA 6 cut(s) 26, 662, 717, 770, 848, 923
Hpy166II GTNNAC 5 cut(s) 116, 171, 773, 1001, 1273
Hpy188I TCNGA 5 cut(s) 60, 342, 643, 878, 1116
Hpy188III TCNNGA 4 cut(s) 805, 971, 1057, 1234
Hpy8I GTNNAC 5 cut(s) 116, 171, 773, 1001, 1273
Hpy99I CGWCG 1 cut(s) 1008
HpyAV CCTTC 4 cut(s) 249, 356, 811, 947
HpyCH4III ACNGT 3 cut(s) 239, 729, 1088
HpyCH4IV ACGT 2 cut(s) 412, 1006
HpyF10VI GCNNNNNNNGC 6 cut(s) 396, 513, 774, 939, 1007, 1297
HpyF3I CTNAG 3 cut(s) 209, 294, 302
HpySE526I ACGT 2 cut(s) 412, 1006
HspAI GCGC 5 cut(s) 393, 488, 931, 1333, 1335
Ksp22I TGATCA 2 cut(s) 807, 847
Kzo9I GATC 8 cut(s) 223, 508, 585, 709, 796, 807, 847, 1111
LguI GCTCTTC 1 cut(s) 342
Lsp1109I GCAGC 5 cut(s) 16, 377, 640, 951, 1349
LweI GCATC 1 cut(s) 1258
MaeI CTAG 4 cut(s) 69, 380, 476, 1314
MaeII ACGT 2 cut(s) 412, 1006
MalI GATC 8 cut(s) 225, 510, 587, 711, 798, 809, 849, 1113
MbiI CCGCTC 1 cut(s) 6
MboI GATC 8 cut(s) 223, 508, 585, 709, 796, 807, 847, 1111
MfeI CAATTG 3 cut(s) 666, 843, 1011
MflI RGATCY 1 cut(s) 796
MhlI GDGCHC 3 cut(s) 58, 173, 1003
MlyI GAGTC 1 cut(s) 671
MmeI TCCRAC 1 cut(s) 183
MroXI GAANNNNTTC 1 cut(s) 283
MseI TTAA 2 cut(s) 273, 552
MslI CAYNNNNRTG 1 cut(s) 1067
MspA1I CMGCKG 1 cut(s) 165
MspI CCGG 3 cut(s) 202, 353, 491
MspR9I CCNGG 2 cut(s) 908, 1219
MunI CAATTG 3 cut(s) 666, 843, 1011
Mva1269I GAATGC 1 cut(s) 750
MvaI CCWGG 2 cut(s) 908, 1219
MvnI CGCG 1 cut(s) 1335
MwoI GCNNNNNNNGC 6 cut(s) 396, 513, 774, 939, 1007, 1297
NcoI CCATGG 2 cut(s) 334, 1292
NdeII GATC 8 cut(s) 223, 508, 585, 709, 796, 807, 847, 1111
NlaIV GGNNCC 3 cut(s) 798, 905, 1367
NmeAIII GCCGAG 1 cut(s) 583
NsbI TGCGCA 2 cut(s) 394, 932
NspI RCATGY 1 cut(s) 1333
PagI TCATGA 2 cut(s) 804, 1056
PauI GCGCGC 1 cut(s) 1333
PciSI GCTCTTC 1 cut(s) 342
PctI GAATGC 1 cut(s) 750
PdmI GAANNNNTTC 1 cut(s) 283
PfeI GAWTC 1 cut(s) 1348
PflMI CCANNNNNTGG 1 cut(s) 165
PfoI TCCNGGA 1 cut(s) 1217
PkrI GCNGC 6 cut(s) 31, 300, 392, 630, 941, 1339
Ple19I CGATCG 1 cut(s) 712
PleI GAGTC 1 cut(s) 670
PpsI GAGTC 1 cut(s) 670
PsiI TTATAA 1 cut(s) 522
Psp124BI GAGCTC 1 cut(s) 58
Psp6I CCWGG 2 cut(s) 906, 1217
PspGI CCWGG 2 cut(s) 906, 1217
PspN4I GGNNCC 3 cut(s) 798, 905, 1367
PspPI GGNCC 1 cut(s) 544
PstNI CAGNNNCTG 1 cut(s) 1102
PsuI RGATCY 1 cut(s) 796
PteI GCGCGC 1 cut(s) 1333
PvuI CGATCG 1 cut(s) 712
RsaI GTAC 6 cut(s) 67, 241, 367, 826, 917, 1214
RsaNI GTAC 6 cut(s) 66, 240, 366, 825, 916, 1213
RseI CAYNNNNRTG 1 cut(s) 1067
SacI GAGCTC 1 cut(s) 58
SalI GTCGAC 1 cut(s) 114
SapI GCTCTTC 1 cut(s) 342
SaqAI TTAA 2 cut(s) 273, 552
SatI GCNGC 6 cut(s) 30, 299, 391, 629, 940, 1338
Sau3AI GATC 8 cut(s) 223, 508, 585, 709, 796, 807, 847, 1111
Sau96I GGNCC 1 cut(s) 544
ScaI AGTACT 1 cut(s) 826
SchI GAGTC 1 cut(s) 671
ScrFI CCNGG 2 cut(s) 908, 1219
SduI GDGCHC 3 cut(s) 58, 173, 1003
SfaNI GCATC 1 cut(s) 1258
SgrAI CRCCGGYG 1 cut(s) 490
SinI GGWCC 1 cut(s) 544
SmiMI CAYNNNNRTG 1 cut(s) 1067
SpeI ACTAGT 2 cut(s) 68, 475
SsiI CCGC 3 cut(s) 6, 163, 299
SspI AATATT 1 cut(s) 1022
SspMI CTAG 4 cut(s) 69, 380, 476, 1314
SstI GAGCTC 1 cut(s) 58
StyD4I CCNGG 2 cut(s) 906, 1217
StyI CCWWGG 2 cut(s) 334, 1292
TaaI ACNGT 3 cut(s) 239, 729, 1088
TaiI ACGT 2 cut(s) 415, 1009
TaqI TCGA 4 cut(s) 52, 115, 708, 1252
TatI WGTACW 2 cut(s) 824, 915
TauI GCSGC 1 cut(s) 301
TfiI GAWTC 1 cut(s) 1348
Tru1I TTAA 2 cut(s) 273, 552
Tru9I TTAA 2 cut(s) 273, 552
TscAI CASTG 2 cut(s) 903, 1069
TseI GCWGC 5 cut(s) 29, 390, 628, 939, 1337
TspDTI ATGAA 8 cut(s) 420, 600, 793, 1045, 1137, 1170, 1257, 1350
TspGWI ACGGA 1 cut(s) 1191
TspRI CASTG 2 cut(s) 903, 1069
Van91I CCANNNNNTGG 1 cut(s) 165
VneI GTGCAC 2 cut(s) 169, 999
VpaK11BI GGWCC 1 cut(s) 544
XapI RAATTY 3 cut(s) 131, 617, 872
XceI RCATGY 1 cut(s) 1333
XmiI GTMKAC 1 cut(s) 115
XmnI GAANNNNTTC 1 cut(s) 283
XspI CTAG 4 cut(s) 69, 380, 476, 1314
ZrmI AGTACT 1 cut(s) 826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.