transcription factor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 102 |
| AciI | CCGC | 1 cut(s) | 580 |
| AcoI | YGGCCR | 1 cut(s) | 269 |
| AgsI | TTSAA | 4 cut(s) | 370, 434, 514, 566 |
| AjnI | CCWGG | 1 cut(s) | 414 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 426, 458 |
| AleI | CACNNNNGTG | 1 cut(s) | 123 |
| AluBI | AGCT | 5 cut(s) | 134, 197, 549, 572, 600 |
| AluI | AGCT | 5 cut(s) | 134, 197, 549, 572, 600 |
| Alw21I | GWGCWC | 1 cut(s) | 199 |
| AoxI | GGCC | 3 cut(s) | 269, 417, 463 |
| ApeKI | GCWGC | 2 cut(s) | 95, 546 |
| AseI | ATTAAT | 1 cut(s) | 309 |
| AsuC2I | CCSGG | 1 cut(s) | 273 |
| AsuHPI | GGTGA | 1 cut(s) | 46 |
| BanII | GRGCYC | 1 cut(s) | 199 |
| Bbv12I | GWGCWC | 1 cut(s) | 199 |
| BbvI | GCAGC | 2 cut(s) | 82, 558 |
| BccI | CCATC | 1 cut(s) | 148 |
| BciT130I | CCWGG | 1 cut(s) | 416 |
| BcnI | CCSGG | 1 cut(s) | 273 |
| BfaI | CTAG | 4 cut(s) | 113, 131, 483, 601 |
| BisI | GCNGC | 2 cut(s) | 96, 547 |
| BlsI | GCNGC | 2 cut(s) | 97, 548 |
| Bme1390I | CCNGG | 2 cut(s) | 273, 416 |
| BmrFI | CCNGG | 2 cut(s) | 273, 416 |
| BmsI | GCATC | 3 cut(s) | 348, 432, 488 |
| BpmI | CTGGAG | 1 cut(s) | 41 |
| BpuEI | CTTGAG | 2 cut(s) | 328, 342 |
| BpuMI | CCSGG | 1 cut(s) | 273 |
| BsaJI | CCNNGG | 1 cut(s) | 414 |
| Bse3DI | GCAATG | 1 cut(s) | 209 |
| BseBI | CCWGG | 1 cut(s) | 416 |
| BseDI | CCNNGG | 1 cut(s) | 414 |
| BseGI | GGATG | 2 cut(s) | 140, 325 |
| BseMI | GCAATG | 1 cut(s) | 209 |
| BseMII | CTCAG | 3 cut(s) | 84, 514, 551 |
| BseXI | GCAGC | 2 cut(s) | 82, 558 |
| BshFI | GGCC | 3 cut(s) | 271, 419, 465 |
| BsiHKAI | GWGCWC | 1 cut(s) | 199 |
| BsiSI | CCGG | 1 cut(s) | 272 |
| BslFI | GGGAC | 1 cut(s) | 397 |
| BsmFI | GGGAC | 1 cut(s) | 397 |
| BsmI | GAATGC | 1 cut(s) | 532 |
| BsnI | GGCC | 3 cut(s) | 271, 419, 465 |
| Bsp1286I | GDGCHC | 1 cut(s) | 199 |
| Bsp143I | GATC | 1 cut(s) | 115 |
| BspACI | CCGC | 1 cut(s) | 580 |
| BspANI | GGCC | 3 cut(s) | 271, 419, 465 |
| BspCNI | CTCAG | 3 cut(s) | 83, 513, 550 |
| BsrDI | GCAATG | 1 cut(s) | 209 |
| BssECI | CCNNGG | 1 cut(s) | 414 |
| BssMI | GATC | 1 cut(s) | 115 |
| BssNAI | GTATAC | 1 cut(s) | 103 |
| Bst1107I | GTATAC | 1 cut(s) | 103 |
| Bst2UI | CCWGG | 1 cut(s) | 416 |
| Bst4CI | ACNGT | 3 cut(s) | 292, 302, 461 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 211 |
| BstC8I | GCNNGC | 1 cut(s) | 421 |
| BstDEI | CTNAG | 3 cut(s) | 70, 500, 537 |
| BstF5I | GGATG | 2 cut(s) | 140, 325 |
| BstKTI | GATC | 1 cut(s) | 118 |
| BstMBI | GATC | 1 cut(s) | 115 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 44, 211 |
| BstNI | CCWGG | 1 cut(s) | 416 |
| BstSCI | CCNGG | 2 cut(s) | 271, 414 |
| BstV1I | GCAGC | 2 cut(s) | 82, 558 |
| BstZ17I | GTATAC | 1 cut(s) | 103 |
| BsuRI | GGCC | 3 cut(s) | 271, 419, 465 |
| BtsCI | GGATG | 2 cut(s) | 140, 325 |
| BtsI | GCAGTG | 1 cut(s) | 386 |
| BtsIMutI | CAGTG | 2 cut(s) | 78, 386 |
| Cac8I | GCNNGC | 1 cut(s) | 421 |
| CseI | GACGC | 1 cut(s) | 538 |
| CviAII | CATG | 1 cut(s) | 241 |
| DdeI | CTNAG | 3 cut(s) | 70, 500, 537 |
| DpnI | GATC | 1 cut(s) | 117 |
| DpnII | GATC | 1 cut(s) | 115 |
| EaeI | YGGCCR | 1 cut(s) | 269 |
| Ecl136II | GAGCTC | 1 cut(s) | 197 |
| Eco24I | GRGCYC | 1 cut(s) | 199 |
| Eco53kI | GAGCTC | 1 cut(s) | 197 |
| EcoICRI | GAGCTC | 1 cut(s) | 197 |
| EcoRII | CCWGG | 1 cut(s) | 414 |
| EcoT38I | GRGCYC | 1 cut(s) | 199 |
| FaeI | CATG | 1 cut(s) | 244 |
| FaiI | YATR | 6 cut(s) | 50, 103, 155, 242, 552, 576 |
| FaqI | GGGAC | 1 cut(s) | 397 |
| FatI | CATG | 1 cut(s) | 240 |
| FblI | GTMKAC | 1 cut(s) | 102 |
| Fnu4HI | GCNGC | 2 cut(s) | 96, 547 |
| FokI | GGATG | 2 cut(s) | 127, 332 |
| FriOI | GRGCYC | 1 cut(s) | 199 |
| Fsp4HI | GCNGC | 2 cut(s) | 96, 547 |
| FspBI | CTAG | 4 cut(s) | 113, 131, 483, 601 |
| GluI | GCNGC | 2 cut(s) | 96, 547 |
| GsuI | CTGGAG | 1 cut(s) | 41 |
| HaeIII | GGCC | 3 cut(s) | 271, 419, 465 |
| HapII | CCGG | 1 cut(s) | 272 |
| HgaI | GACGC | 1 cut(s) | 538 |
| Hin1II | CATG | 1 cut(s) | 244 |
| HinfI | GANTC | 3 cut(s) | 77, 89, 218 |
| HpaII | CCGG | 1 cut(s) | 272 |
| HphI | GGTGA | 1 cut(s) | 46 |
| Hpy166II | GTNNAC | 3 cut(s) | 103, 128, 488 |
| Hpy188I | TCNGA | 4 cut(s) | 82, 378, 503, 587 |
| Hpy188III | TCNNGA | 1 cut(s) | 20 |
| Hpy8I | GTNNAC | 3 cut(s) | 103, 128, 488 |
| HpyCH4III | ACNGT | 3 cut(s) | 292, 302, 461 |
| HpyCH4V | TGCA | 3 cut(s) | 62, 214, 391 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 44, 211 |
| HpyF3I | CTNAG | 3 cut(s) | 70, 500, 537 |
| Hsp92II | CATG | 1 cut(s) | 244 |
| Kzo9I | GATC | 1 cut(s) | 115 |
| LmnI | GCTCC | 1 cut(s) | 202 |
| Lsp1109I | GCAGC | 2 cut(s) | 82, 558 |
| LweI | GCATC | 3 cut(s) | 348, 432, 488 |
| MaeI | CTAG | 4 cut(s) | 113, 131, 483, 601 |
| MaeIII | GTNAC | 2 cut(s) | 292, 384 |
| MalI | GATC | 1 cut(s) | 117 |
| MboI | GATC | 1 cut(s) | 115 |
| MfeI | CAATTG | 1 cut(s) | 263 |
| MhlI | GDGCHC | 1 cut(s) | 199 |
| MluCI | AATT | 2 cut(s) | 263, 306 |
| MlyI | GAGTC | 1 cut(s) | 83 |
| MmeI | TCCRAC | 1 cut(s) | 424 |
| MnlI | CCTC | 2 cut(s) | 49, 406 |
| MseI | TTAA | 1 cut(s) | 309 |
| MslI | CAYNNNNRTG | 1 cut(s) | 123 |
| MspI | CCGG | 1 cut(s) | 272 |
| MspR9I | CCNGG | 2 cut(s) | 273, 416 |
| MunI | CAATTG | 1 cut(s) | 263 |
| Mva1269I | GAATGC | 1 cut(s) | 532 |
| MvaI | CCWGG | 1 cut(s) | 416 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 44, 211 |
| NciI | CCSGG | 1 cut(s) | 273 |
| NdeII | GATC | 1 cut(s) | 115 |
| NlaIII | CATG | 1 cut(s) | 244 |
| NmuCI | GTSAC | 1 cut(s) | 384 |
| OliI | CACNNNNGTG | 1 cut(s) | 123 |
| PctI | GAATGC | 1 cut(s) | 532 |
| PfeI | GAWTC | 2 cut(s) | 77, 218 |
| PflFI | GACNNNGTC | 1 cut(s) | 382 |
| PkrI | GCNGC | 2 cut(s) | 97, 548 |
| PleI | GAGTC | 1 cut(s) | 83 |
| PpsI | GAGTC | 1 cut(s) | 83 |
| PshBI | ATTAAT | 1 cut(s) | 309 |
| Psp124BI | GAGCTC | 1 cut(s) | 199 |
| Psp6I | CCWGG | 1 cut(s) | 414 |
| PspGI | CCWGG | 1 cut(s) | 414 |
| PsyI | GACNNNGTC | 1 cut(s) | 382 |
| RseI | CAYNNNNRTG | 1 cut(s) | 123 |
| SacI | GAGCTC | 1 cut(s) | 199 |
| SaqAI | TTAA | 1 cut(s) | 309 |
| SatI | GCNGC | 2 cut(s) | 96, 547 |
| Sau3AI | GATC | 1 cut(s) | 115 |
| SchI | GAGTC | 1 cut(s) | 83 |
| ScrFI | CCNGG | 2 cut(s) | 273, 416 |
| SduI | GDGCHC | 1 cut(s) | 199 |
| SetI | ASST | 6 cut(s) | 136, 199, 543, 551, 574, 602 |
| SfaNI | GCATC | 3 cut(s) | 348, 432, 488 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 123 |
| SmlI | CTYRAG | 2 cut(s) | 343, 357 |
| SmoI | CTYRAG | 2 cut(s) | 343, 357 |
| Sse9I | AATT | 2 cut(s) | 263, 306 |
| SsiI | CCGC | 1 cut(s) | 580 |
| SspMI | CTAG | 4 cut(s) | 113, 131, 483, 601 |
| SstI | GAGCTC | 1 cut(s) | 199 |
| StyD4I | CCNGG | 2 cut(s) | 271, 414 |
| TaaI | ACNGT | 3 cut(s) | 292, 302, 461 |
| TaqI | TCGA | 1 cut(s) | 451 |
| TasI | AATT | 2 cut(s) | 263, 306 |
| TfiI | GAWTC | 2 cut(s) | 77, 218 |
| Tru1I | TTAA | 1 cut(s) | 309 |
| Tru9I | TTAA | 1 cut(s) | 309 |
| TscAI | CASTG | 2 cut(s) | 78, 393 |
| TseFI | GTSAC | 1 cut(s) | 384 |
| TseI | GCWGC | 2 cut(s) | 95, 546 |
| Tsp45I | GTSAC | 1 cut(s) | 384 |
| TspDTI | ATGAA | 3 cut(s) | 17, 170, 336 |
| TspGWI | ACGGA | 1 cut(s) | 133 |
| TspRI | CASTG | 2 cut(s) | 78, 393 |
| Tth111I | GACNNNGTC | 1 cut(s) | 382 |
| VspI | ATTAAT | 1 cut(s) | 309 |
| XmiI | GTMKAC | 1 cut(s) | 102 |
| XspI | CTAG | 4 cut(s) | 113, 131, 483, 601 |