Rh2AG578000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000216
Physical Location & Seq
Forward (+)
80746612 .. 80748335
1724 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG578000.1

Sequence Viewer

Length: 1269 bp
ATGATCTCCCGGATGTTGTGTTGGTTGAAATTCTTTGTCGGCTTCCATGCTATAAGTTTGTTTCAAAATGCAAGTGCGTGTCCAAACGTTGGTGCAATGTCATGTCCGGTCCTTATTTTCTTGGCCGCTTTCTATGTCTCCAGGAGTGATCGTGAGCAAACACCAATAATTCGTACTCTGATAACCAACAAAGGGGAGGAGTTCCTTACTAGAATGTCATCGTCCACCAAGCCGCTAGCTCTGTTGTTTGAAAGACTCATGAGTTCTCACCATTTGGAACAAGAGCCGGTAGTGGTAGCTACGTATAATGACTTGGTTTTGTGCTGTACAACCTGGGGCTATTATCAACGTGATTACTACATCTGCAATCCGTGCACAGTTCAGTGGGTTCCTGTTCCTCCCCCTCCTCGAGTTTACCGGTATACACCAGTGGGATTCATGTGTGATCTTCCCTACTATAACTGTACGAAAGATGATCAGGGAGGAAGTTTCATTCAGGTCAATGCTGAGTATATGTGCACGATAGTGAGATTAATTCTTCGTAAGAGATCTGTCTGCAAACTCAAAGTGCAAATCTTCTCCTCTGATACCGGTGAATGGAAAACATCAACTATATCAATTCCATCAGGCTTTATTTCAGACACCGTCCCTCTAGAGAGGAGCTTCAGTTACAATGGCATGCCGTATTTTGTGGGTGATGAACGTGGTGATCAAAATTTTCTTATGGGGTTGGATCCATTCATGATCAACAATAGTAACAGTGCTCTTAGTTTATCTAGTACTAGCCGTAATAGTACTAATGATGATGATATCATTGATCACTATAAATGTCGTTTCATTCGATTTGATGATCCAAACTCTTTTCTACTTCGGTATCTTGGTGAATACAGAGGGTGTCTGCACATGTGCGACTATCATGATCATACCTCTACTCTTTTTGTTCGGGAGTTGAAAGAAGAAGAAATGCATGGAGGAGCTGGCAAATTATGTTTGGAAGGCATGATGAAGGATTATTCACTGGACATAAAAATGGTTCCGGGTTATGATATTGTTGATTTACAATTTTTAGACCCCAATAACGAGGATATTTTATATATGTACATTGGCAAAGACATTGTCAGGTACAACATTCGAACAAGAGATTGGTTAAAGCTTGTTGAAAACATTCCCTATGGGAATTCTTTTCTCTTTCCAATTGTGCTCCCTTGGTGGCCAACACCAGTTCCTAGACTACCGCCACACGCCCAACCTGCGGGAATAAATCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

422

Amino Acids

48.58

Weight (kDa)

5.88

Isoelectric Point (pI)

45.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
b-prop_At3g26010-like PF24750 90 - 239 2.5e-10 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000216)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38860 AT5G38860
fragaria_vesca FvH4_2g24261 FvH4_2g24270 FvH4_3g35490 FvH4_6g03181 FvH4_6g03182 FvH4_6g03221 FvH4_6g03380 FvH4_6g05203 FvH4_6g31981 FvH4_6g32061 FvH4_6g37041 FvH4_6g39371 FvH4_6g45291 FvH4_6g45890 FvH4_6g46240 FvH4_6g46241 FvH4_6g46242 FvH4_6g46260 FvH4_6g46280 FvH4_6g46280 FvH4_6g46280 FvH4_6g46290 FvH4_6g46290 FvH4_6g46380
malus_domestica MD02G1008700.v1.1 MD02G1008900.v1.1 MD04G1180900.v1.1 MD04G1181200.v1.1 MD09G1075900.v1.1 MD09G1201600.v1.1 MD15G1017800.v1.1 MD17G1066600.v1.1
prunus_persica Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G512600_v2.0.a1 Prupe.3G059500_v2.0.a1 Prupe.3G059600_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.6G076400_v2.0.a1
pyrus_communis pycom02g00750 pycom03g20320 pycom09g00330 pycom11g08760 pycom17g04880 pycom17g06710 pycom17g19130
rosa_chinensis RchiOBHm_Chr2g0123691 RchiOBHm_Chr2g0164671 RchiOBHm_Chr2g0164681 RchiOBHm_Chr2g0164721 RchiOBHm_Chr2g0164741 RchiOBHm_Chr6g0275871 RchiOBHm_Chr6g0276071 RchiOBHm_Chr6g0291931 RchiOBHm_Chr6g0292091 RchiOBHm_Chr6g0292271 RchiOBHm_Chr7g0221261
rosa_laevigata RLG00000002165 RLG00000007725 RLG00000012062 RLG00000012543 RLG00000013427 RLG00000021441 RLG00000021477 RLG00000021478 RLG00000021480 RLG00000021481
rosa_multiflora Rmu_co8220318.1_g000001 Rmu_co8427407.1_g000001 Rmu_sc0000946.1_g000006 Rmu_sc0000946.1_g000007 Rmu_sc0000946.1_g000010 Rmu_sc0000946.1_g000012 Rmu_sc0000946.1_g000013 Rmu_sc0002030.1_g000015 Rmu_sc0002870.1_g000002 Rmu_sc0003200.1_g000004 Rmu_sc0004915.1_g000002 Rmu_sc0004991.1_g000006 Rmu_sc0006928.1_g000020 Rmu_sc0007384.1_g000001 Rmu_sc0030722.1_g000001 Rmu_sc0030723.1_g000001 Rmu_ssc0000076.1_g000019 Rmu_ssc0000076.1_g000025 Rmu_ssc0000318.1_g000001
rosa_roxburghii Rroxscaffold_2G00086340 Rroxscaffold_2G00086360 Rroxscaffold_2G00086370 Rroxscaffold_2G00086380 Rroxscaffold_2G00086830 Rroxscaffold_2G00087380 Rroxscaffold_2G00120420 Rroxscaffold_7G00175260 Rroxscaffold_7G00175600 Rroxscaffold_7G00177970 Rroxscaffold_7G00192830
rosa_rugosa Rorug02G0247400 Rorug02G0506200 Rorug02G0508300 Rorug02G0509700 Rorug05G0378800 Rorug06G0096600 Rorug06G0096700 Rorug06G0221800
rosa_samantha Rh2AG577600 Rh2AG577700 Rh2AG577800 Rh2AG578000 Rh2AG578100 Rh2BG589200 Rh2CG559800 Rh2DG594400 Rh2DG594500 Rh2DG597800 Rh2DG599400 Rh2DG599500 Rh2DG599600 Rh6AG338400 Rh6BG211200 Rh6BG212600 Rh6BG342900 Rh6BG345600 Rh6CG214800 Rh6CG349100 Rh6CG350600 Rh6CG350700 Rh6CG352600 Rh7AG340800
rosa_wichuraiana Rw1G028590 Rw2G047980 Rw2G047990 Rw5G043360 Rw6G018180 Rw6G029200 Rw6G029450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1258
AccB7I CCANNNNNTGG 1 cut(s) 89
AccI GTMKAC 1 cut(s) 422
AciI CCGC 4 cut(s) 126, 233, 1235, 1253
AclI AACGTT 1 cut(s) 87
AclWI GGATC 3 cut(s) 728, 741, 845
AcoI YGGCCR 2 cut(s) 123, 1211
AcsI RAATTY 3 cut(s) 29, 715, 1177
AcuI CTGAAG 1 cut(s) 649
AfaI GTAC 7 cut(s) 175, 328, 466, 781, 796, 1100, 1124
AfiI CCNNNNNNNGG 4 cut(s) 89, 192, 597, 1252
AflIII ACRYGT 1 cut(s) 903
AgeI ACCGGT 2 cut(s) 417, 590
AgsI TTSAA 5 cut(s) 28, 65, 251, 952, 1160
AjnI CCWGG 2 cut(s) 140, 332
AjuI GAANNNNNNNTTGG 2 cut(s) 1126, 1158
AleI CACNNNNGTG 1 cut(s) 524
AluBI AGCT 5 cut(s) 239, 299, 663, 977, 1153
AluI AGCT 5 cut(s) 239, 299, 663, 977, 1153
Alw21I GWGCWC 4 cut(s) 377, 521, 766, 1203
Alw26I GTCTC 1 cut(s) 142
Alw44I GTGCAC 2 cut(s) 373, 517
AlwI GGATC 3 cut(s) 728, 741, 845
Ama87I CYCGRG 1 cut(s) 408
AoxI GGCC 2 cut(s) 123, 1211
ApaLI GTGCAC 2 cut(s) 373, 517
ApoI RAATTY 3 cut(s) 29, 715, 1177
ArsI GACNNNNNNTTYG 2 cut(s) 1101, 1133
AseI ATTAAT 1 cut(s) 533
AsiGI ACCGGT 2 cut(s) 417, 590
Asp700I GAANNNNTTC 1 cut(s) 1164
AspS9I GGNCC 1 cut(s) 109
AsuC2I CCSGG 2 cut(s) 10, 1038
AsuHPI GGTGA 5 cut(s) 260, 605, 707, 719, 893
AsuII TTCGAA 1 cut(s) 1132
AsuNHI GCTAGC 1 cut(s) 235
AvaI CYCGRG 1 cut(s) 408
AvaII GGWCC 1 cut(s) 109
BaeGI GKGCMC 2 cut(s) 377, 521
BaeI ACNNNNGTAYC 2 cut(s) 857, 890
BalI TGGCCA 1 cut(s) 1213
BamHI GGATCC 1 cut(s) 733
Bbv12I GWGCWC 4 cut(s) 377, 521, 766, 1203
BccI CCATC 1 cut(s) 631
BceAI ACGGC 2 cut(s) 667, 771
BciT130I CCWGG 2 cut(s) 142, 334
BclI TGATCA 5 cut(s) 475, 709, 744, 817, 919
BcnI CCSGG 2 cut(s) 10, 1038
BcoDI GTCTC 1 cut(s) 142
BfaI CTAG 6 cut(s) 210, 236, 653, 777, 783, 1227
BfuAI ACCTGC 1 cut(s) 1258
BglII AGATCT 1 cut(s) 548
BisI GCNGC 2 cut(s) 126, 233
BlsI GCNGC 2 cut(s) 127, 234
BmcAI AGTACT 2 cut(s) 781, 796
Bme1390I CCNGG 4 cut(s) 10, 142, 334, 1038
Bme18I GGWCC 1 cut(s) 109
BmeT110I CYCGRG 1 cut(s) 408
BmgT120I GGNCC 1 cut(s) 109
BmiI GGNNCC 3 cut(s) 390, 735, 1035
BmrFI CCNGG 4 cut(s) 10, 142, 334, 1038
BmtI GCTAGC 1 cut(s) 239
BpmI CTGGAG 1 cut(s) 124
Bpu14I TTCGAA 1 cut(s) 1132
BpuMI CCSGG 2 cut(s) 10, 1038
BsaAI YACGTR 1 cut(s) 303
BsaJI CCNNGG 2 cut(s) 333, 1205
BsaWI WCCGGW 3 cut(s) 106, 417, 590
BsaXI ACNNNNNCTCC 4 cut(s) 136, 166, 652, 682
Bsc4I CCNNNNNNNGG 4 cut(s) 89, 192, 597, 1252
Bse118I RCCGGY 3 cut(s) 286, 417, 590
Bse1I ACTGG 3 cut(s) 428, 1023, 1220
Bse3DI GCAATG 1 cut(s) 102
BseBI CCWGG 2 cut(s) 142, 334
BseDI CCNNGG 2 cut(s) 333, 1205
BseGI GGATG 1 cut(s) 18
BseLI CCNNNNNNNGG 4 cut(s) 89, 192, 597, 1252
BseMI GCAATG 1 cut(s) 102
BseMII CTCAG 1 cut(s) 498
BseNI ACTGG 3 cut(s) 428, 1023, 1220
BseRI GAGGAG 5 cut(s) 212, 396, 571, 673, 987
BseSI GKGCMC 2 cut(s) 377, 521
BsgI GTGCAG 1 cut(s) 884
BshFI GGCC 2 cut(s) 125, 1213
BshTI ACCGGT 2 cut(s) 417, 590
BsiHKAI GWGCWC 4 cut(s) 377, 521, 766, 1203
BsiHKCI CYCGRG 1 cut(s) 408
BsiSI CCGG 6 cut(s) 10, 107, 287, 418, 591, 1037
BslFI GGGAC 1 cut(s) 632
BslI CCNNNNNNNGG 4 cut(s) 89, 192, 597, 1252
BsmAI GTCTC 1 cut(s) 142
BsmFI GGGAC 1 cut(s) 632
BsnI GGCC 2 cut(s) 125, 1213
BsoBI CYCGRG 1 cut(s) 408
Bsp119I TTCGAA 1 cut(s) 1132
Bsp1286I GDGCHC 4 cut(s) 377, 521, 766, 1203
Bsp1407I TGTACA 2 cut(s) 326, 1098
BspACI CCGC 4 cut(s) 126, 233, 1235, 1253
BspANI GGCC 2 cut(s) 125, 1213
BspCNI CTCAG 1 cut(s) 499
BspHI TCATGA 3 cut(s) 258, 741, 916
BspLI GGNNCC 3 cut(s) 390, 735, 1035
BspMI ACCTGC 1 cut(s) 1258
BspOI GCTAGC 1 cut(s) 239
BspPI GGATC 3 cut(s) 728, 741, 845
BspT104I TTCGAA 1 cut(s) 1132
BsrDI GCAATG 1 cut(s) 102
BsrFI RCCGGY 3 cut(s) 286, 417, 590
BsrGI TGTACA 2 cut(s) 326, 1098
BsrI ACTGG 3 cut(s) 428, 1023, 1220
BssAI RCCGGY 3 cut(s) 286, 417, 590
BssECI CCNNGG 2 cut(s) 333, 1205
BssNAI GTATAC 1 cut(s) 423
BssT1I CCWWGG 1 cut(s) 1205
Bst1107I GTATAC 1 cut(s) 423
Bst2UI CCWGG 2 cut(s) 142, 334
Bst4CI ACNGT 4 cut(s) 379, 464, 646, 761
BstAPI GCANNNNNTGC 1 cut(s) 372
BstAUI TGTACA 2 cut(s) 326, 1098
BstBAI YACGTR 1 cut(s) 303
BstBI TTCGAA 1 cut(s) 1132
BstC8I GCNNGC 3 cut(s) 237, 680, 979
BstDEI CTNAG 2 cut(s) 507, 767
BstF5I GGATG 1 cut(s) 18
BstMAI GTCTC 1 cut(s) 142
BstMWI GCNNNNNNNGC 2 cut(s) 372, 1250
BstNI CCWGG 2 cut(s) 142, 334
BstNSI RCATGY 2 cut(s) 682, 907
BstSCI CCNGG 4 cut(s) 8, 140, 332, 1036
BstSLI GKGCMC 2 cut(s) 377, 521
BstSNI TACGTA 1 cut(s) 303
BstX2I RGATCY 2 cut(s) 548, 733
BstYI RGATCY 2 cut(s) 548, 733
BstZ17I GTATAC 1 cut(s) 423
BsuRI GGCC 2 cut(s) 125, 1213
BtsCI GGATG 1 cut(s) 18
BtsIMutI CAGTG 4 cut(s) 389, 435, 766, 1016
BveI ACCTGC 1 cut(s) 1258
Cac8I GCNNGC 3 cut(s) 237, 680, 979
CciI TCATGA 3 cut(s) 258, 741, 916
Cfr10I RCCGGY 3 cut(s) 286, 417, 590
Cfr13I GGNCC 1 cut(s) 109
Csp6I GTAC 7 cut(s) 174, 327, 465, 780, 795, 1099, 1123
CspAI ACCGGT 2 cut(s) 417, 590
CviQI GTAC 7 cut(s) 174, 327, 465, 780, 795, 1099, 1123
DdeI CTNAG 2 cut(s) 507, 767
EaeI YGGCCR 2 cut(s) 123, 1211
Eco105I TACGTA 1 cut(s) 303
Eco130I CCWWGG 1 cut(s) 1205
Eco32I GATATC 1 cut(s) 811
Eco47I GGWCC 1 cut(s) 109
Eco57I CTGAAG 1 cut(s) 649
Eco88I CYCGRG 1 cut(s) 408
EcoRI GAATTC 1 cut(s) 1177
EcoRII CCWGG 2 cut(s) 140, 332
EcoRV GATATC 1 cut(s) 811
EcoT14I CCWWGG 1 cut(s) 1205
EcoT22I ATGCAT 1 cut(s) 969
ErhI CCWWGG 1 cut(s) 1205
FaqI GGGAC 1 cut(s) 632
FauI CCCGC 1 cut(s) 1246
FbaI TGATCA 5 cut(s) 475, 709, 744, 817, 919
FblI GTMKAC 1 cut(s) 422
Fnu4HI GCNGC 2 cut(s) 126, 233
FokI GGATG 1 cut(s) 25
Fsp4HI GCNGC 2 cut(s) 126, 233
FspBI CTAG 6 cut(s) 210, 236, 653, 777, 783, 1227
GluI GCNGC 2 cut(s) 126, 233
GsuI CTGGAG 1 cut(s) 124
HaeIII GGCC 2 cut(s) 125, 1213
HapII CCGG 6 cut(s) 10, 107, 287, 418, 591, 1037
HindIII AAGCTT 1 cut(s) 1151
HinfI GANTC 2 cut(s) 255, 435
HpaII CCGG 6 cut(s) 10, 107, 287, 418, 591, 1037
HphI GGTGA 5 cut(s) 260, 605, 707, 719, 893
Hpy166II GTNNAC 5 cut(s) 225, 375, 415, 423, 519
Hpy188I TCNGA 4 cut(s) 180, 586, 640, 1268
Hpy188III TCNNGA 6 cut(s) 152, 259, 653, 742, 917, 944
Hpy8I GTNNAC 5 cut(s) 225, 375, 415, 423, 519
HpyAV CCTTC 2 cut(s) 989, 1000
HpyCH4III ACNGT 4 cut(s) 379, 464, 646, 761
HpyCH4IV ACGT 4 cut(s) 87, 302, 349, 703
HpyCH4V TGCA 9 cut(s) 71, 95, 366, 375, 519, 558, 571, 901, 967
HpyF10VI GCNNNNNNNGC 2 cut(s) 372, 1250
HpyF3I CTNAG 2 cut(s) 507, 767
HpySE526I ACGT 4 cut(s) 87, 302, 349, 703
Ksp22I TGATCA 5 cut(s) 475, 709, 744, 817, 919
LmnI GCTCC 3 cut(s) 660, 974, 1206
MaeI CTAG 6 cut(s) 210, 236, 653, 777, 783, 1227
MaeII ACGT 4 cut(s) 87, 302, 349, 703
MaeIII GTNAC 2 cut(s) 668, 755
MboII GAAGA 5 cut(s) 440, 530, 568, 968, 971
MfeI CAATTG 1 cut(s) 1194
MflI RGATCY 2 cut(s) 548, 733
MhlI GDGCHC 4 cut(s) 377, 521, 766, 1203
MlsI TGGCCA 1 cut(s) 1213
MluCI AATT 9 cut(s) 29, 168, 534, 618, 715, 983, 1061, 1177, 1194
MluNI TGGCCA 1 cut(s) 1213
MlyI GAGTC 1 cut(s) 249
MmeI TCCRAC 1 cut(s) 711
Mox20I TGGCCA 1 cut(s) 1213
Mph1103I ATGCAT 1 cut(s) 969
MroXI GAANNNNTTC 1 cut(s) 1164
MscI TGGCCA 1 cut(s) 1213
MseI TTAA 2 cut(s) 533, 1148
MslI CAYNNNNRTG 2 cut(s) 524, 1028
Msp20I TGGCCA 1 cut(s) 1213
MspI CCGG 6 cut(s) 10, 107, 287, 418, 591, 1037
MspR9I CCNGG 4 cut(s) 10, 142, 334, 1038
MunI CAATTG 1 cut(s) 1194
MvaI CCWGG 2 cut(s) 142, 334
MwoI GCNNNNNNNGC 2 cut(s) 372, 1250
NciI CCSGG 2 cut(s) 10, 1038
NheI GCTAGC 1 cut(s) 235
NlaIV GGNNCC 3 cut(s) 390, 735, 1035
NsiI ATGCAT 1 cut(s) 969
NspI RCATGY 2 cut(s) 682, 907
NspV TTCGAA 1 cut(s) 1132
OliI CACNNNNGTG 1 cut(s) 524
PaeI GCATGC 1 cut(s) 682
PaeR7I CTCGAG 1 cut(s) 408
PagI TCATGA 3 cut(s) 258, 741, 916
PciI ACATGT 1 cut(s) 903
PcsI WCGNNNNNNNCGW 1 cut(s) 838
PdmI GAANNNNTTC 1 cut(s) 1164
PfeI GAWTC 1 cut(s) 435
PflFI GACNNNGTC 2 cut(s) 644, 1115
PflMI CCANNNNNTGG 1 cut(s) 89
PfoI TCCNGGA 2 cut(s) 8, 140
PinAI ACCGGT 2 cut(s) 417, 590
PkrI GCNGC 2 cut(s) 127, 234
PleI GAGTC 1 cut(s) 249
PpsI GAGTC 1 cut(s) 249
Ppu21I YACGTR 1 cut(s) 303
PscI ACATGT 1 cut(s) 903
PshBI ATTAAT 1 cut(s) 533
Psp1406I AACGTT 1 cut(s) 87
Psp6I CCWGG 2 cut(s) 140, 332
PspGI CCWGG 2 cut(s) 140, 332
PspN4I GGNNCC 3 cut(s) 390, 735, 1035
PspPI GGNCC 1 cut(s) 109
PspXI VCTCGAGB 1 cut(s) 408
PsuI RGATCY 2 cut(s) 548, 733
PsyI GACNNNGTC 2 cut(s) 644, 1115
RsaI GTAC 7 cut(s) 175, 328, 466, 781, 796, 1100, 1124
RsaNI GTAC 7 cut(s) 174, 327, 465, 780, 795, 1099, 1123
RseI CAYNNNNRTG 2 cut(s) 524, 1028
SaqAI TTAA 2 cut(s) 533, 1148
SatI GCNGC 2 cut(s) 126, 233
Sau96I GGNCC 1 cut(s) 109
ScaI AGTACT 2 cut(s) 781, 796
SchI GAGTC 1 cut(s) 249
ScrFI CCNGG 4 cut(s) 10, 142, 334, 1038
SduI GDGCHC 4 cut(s) 377, 521, 766, 1203
Sfr274I CTCGAG 1 cut(s) 408
SfuI TTCGAA 1 cut(s) 1132
SinI GGWCC 1 cut(s) 109
SlaI CTCGAG 1 cut(s) 408
SmiMI CAYNNNNRTG 2 cut(s) 524, 1028
SmlI CTYRAG 1 cut(s) 408
SmoI CTYRAG 1 cut(s) 408
SnaBI TACGTA 1 cut(s) 303
SphI GCATGC 1 cut(s) 682
Sse9I AATT 9 cut(s) 29, 168, 534, 618, 715, 983, 1061, 1177, 1194
SsiI CCGC 4 cut(s) 126, 233, 1235, 1253
SspMI CTAG 6 cut(s) 210, 236, 653, 777, 783, 1227
StyD4I CCNGG 4 cut(s) 8, 140, 332, 1036
StyI CCWWGG 1 cut(s) 1205
TaaI ACNGT 4 cut(s) 379, 464, 646, 761
TaiI ACGT 4 cut(s) 90, 305, 352, 706
TaqI TCGA 3 cut(s) 409, 841, 1132
TasI AATT 9 cut(s) 29, 168, 534, 618, 715, 983, 1061, 1177, 1194
TatI WGTACW 4 cut(s) 326, 779, 794, 1098
TauI GCSGC 2 cut(s) 128, 235
TfiI GAWTC 1 cut(s) 435
Tru1I TTAA 2 cut(s) 533, 1148
Tru9I TTAA 2 cut(s) 533, 1148
TscAI CASTG 4 cut(s) 389, 435, 766, 1023
TspDTI ATGAA 6 cut(s) 427, 481, 714, 730, 826, 1019
TspGWI ACGGA 1 cut(s) 360
TspRI CASTG 4 cut(s) 389, 435, 766, 1023
Tth111I GACNNNGTC 2 cut(s) 644, 1115
Van91I CCANNNNNTGG 1 cut(s) 89
VneI GTGCAC 2 cut(s) 373, 517
VpaK11BI GGWCC 1 cut(s) 109
VspI ATTAAT 1 cut(s) 533
XapI RAATTY 3 cut(s) 29, 715, 1177
XbaI TCTAGA 1 cut(s) 652
XceI RCATGY 2 cut(s) 682, 907
XhoI CTCGAG 1 cut(s) 408
XmiI GTMKAC 1 cut(s) 422
XmnI GAANNNNTTC 1 cut(s) 1164
XspI CTAG 6 cut(s) 210, 236, 653, 777, 783, 1227
ZrmI AGTACT 2 cut(s) 781, 796
Zsp2I ATGCAT 1 cut(s) 969
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.