RchiOBHm_Chr6g0292271

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000216
Physical Location & Seq
Reverse (-)
55221505 .. 55222944
1440 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26227

Sequence Viewer

Length: 1314 bp
ATGAGAGGTGAAAAAGACACAACTATTACATCCGACTCTCTTGTTGCACCCTCTCAGTCTCTTTTTAATACAATATTCTTGAATATCTGTGATCTCCCTAACAGTTTATTGATTGAAATCCTTTGTCGACTACCTTGCAAGTTTGTTTTACGATGCAAGTGTGTGTGCAAATCTTGGTCGACTCTCATCTCCCATCCTTATTTTGAAAGCCGTCGTGCTCTGTATCTCCGAAACAATTGTGACAACGAGCAAATTCCCATGTTTGTCGTACATTCATACCCTTTGGCAGATAACACGGCAGAATTGCTTACAATTGATTCCAATCAGACTCATGCGGAGTTAAGAGCACTCGATTTTCTTCCCAGCAAGCTGGTTGTGGTAGCAACATACAATGACTTGATTTTGTTGTGTGAAAAAACATTGGGTTTTCAAAGGAAGTACTACTACATCTGCAATCCGTACACCAAGCAATGGGTTGCTGTTCCTCCTCCTCCCATTCTATTCCCCCAACAAGAAGTAGGTGTGGGATTTATCCGTGATTCCGACTATAGGTGCCGGATTGTACGACTCCTTGAGTTTGACGCAGAACCTGATGACTTCCGATTAAAGGTGGAGATGTTCTCTTCCGAGACTGGTAAATGGATAGAATCAGTTGTCCTATGCCCAAAGAGGTTTAGACCTCATCCTCTCCAGCAGAGTGCACCAGCCCTTGCTTACAATGGAACCTTGTACTGGTTAGGTCGTGGTGGGATTCTTATTGGGTTGGAGCCTTTCAAGCTCGACAATAAAAACAACCATAACTATCATTGTCATTTTATTTCCGGGCCTCGTTCCGGGTTTCCATTGTTTTATGATTCATACAATTACACCGATTGCCTGGGTGTCTGCCGGGGTTGTGTGAGGATGTGCCGGCTGTATACTCTGACACGTTTCATTCTTTTTGTGTGGGAGCTGAAAGAAGATAGCGGTCTTGAGGTGGATGGAGTTGGAGGCAAAAAGATGAAATGGTGTTTAAAGGAGAGGATCTTCCTGGACCAAATTAAGTCGCAATATATGGTGCCTCATCCCTACTGGCTTCTGGCTTTGGACCCAAATGATGAAGACATGCTGTACCTGCTACGGAGACCTAGCAGCTCCGATCCAAAAGACATTGTTAAGTGCAATATTCGAACAGAAACGCTAATTGACATCTCTCCAAAGTTGCCATTAAAGACAGACGTGGAGGCATTTCCATTTATGCTCTCATGGTGGCGGTGGCCAACACCAGTTCCTAAATTAGGCCATCACAACAATAGCAGCTGCCCACCGCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

437

Amino Acids

50.61

Weight (kDa)

8.01

Isoelectric Point (pI)

51.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 29 - 68 6.8e-09 F-box domain
F-box-like PF12937 29 - 67 4.5e-07 F-box-like
b-prop_At3g26010-like PF24750 122 - 393 5.6e-20 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000216)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38860 AT5G38860
fragaria_vesca FvH4_2g24261 FvH4_2g24270 FvH4_3g35490 FvH4_6g03181 FvH4_6g03182 FvH4_6g03221 FvH4_6g03380 FvH4_6g05203 FvH4_6g31981 FvH4_6g32061 FvH4_6g37041 FvH4_6g39371 FvH4_6g45291 FvH4_6g45890 FvH4_6g46240 FvH4_6g46241 FvH4_6g46242 FvH4_6g46260 FvH4_6g46280 FvH4_6g46280 FvH4_6g46280 FvH4_6g46290 FvH4_6g46290 FvH4_6g46380
malus_domestica MD02G1008700.v1.1 MD02G1008900.v1.1 MD04G1180900.v1.1 MD04G1181200.v1.1 MD09G1075900.v1.1 MD09G1201600.v1.1 MD15G1017800.v1.1 MD17G1066600.v1.1
prunus_persica Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G512600_v2.0.a1 Prupe.3G059500_v2.0.a1 Prupe.3G059600_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.6G076400_v2.0.a1
pyrus_communis pycom02g00750 pycom03g20320 pycom09g00330 pycom11g08760 pycom17g04880 pycom17g06710 pycom17g19130
rosa_chinensis RchiOBHm_Chr2g0123691 RchiOBHm_Chr2g0164671 RchiOBHm_Chr2g0164681 RchiOBHm_Chr2g0164721 RchiOBHm_Chr2g0164741 RchiOBHm_Chr6g0275871 RchiOBHm_Chr6g0276071 RchiOBHm_Chr6g0291931 RchiOBHm_Chr6g0292091 RchiOBHm_Chr6g0292271 RchiOBHm_Chr7g0221261
rosa_laevigata RLG00000002165 RLG00000007725 RLG00000012062 RLG00000012543 RLG00000013427 RLG00000021441 RLG00000021477 RLG00000021478 RLG00000021480 RLG00000021481
rosa_multiflora Rmu_co8220318.1_g000001 Rmu_co8427407.1_g000001 Rmu_sc0000946.1_g000006 Rmu_sc0000946.1_g000007 Rmu_sc0000946.1_g000010 Rmu_sc0000946.1_g000012 Rmu_sc0000946.1_g000013 Rmu_sc0002030.1_g000015 Rmu_sc0002870.1_g000002 Rmu_sc0003200.1_g000004 Rmu_sc0004915.1_g000002 Rmu_sc0004991.1_g000006 Rmu_sc0006928.1_g000020 Rmu_sc0007384.1_g000001 Rmu_sc0030722.1_g000001 Rmu_sc0030723.1_g000001 Rmu_ssc0000076.1_g000019 Rmu_ssc0000076.1_g000025 Rmu_ssc0000318.1_g000001
rosa_roxburghii Rroxscaffold_2G00086340 Rroxscaffold_2G00086360 Rroxscaffold_2G00086370 Rroxscaffold_2G00086380 Rroxscaffold_2G00086830 Rroxscaffold_2G00087380 Rroxscaffold_2G00120420 Rroxscaffold_7G00175260 Rroxscaffold_7G00175600 Rroxscaffold_7G00177970 Rroxscaffold_7G00192830
rosa_rugosa Rorug02G0247400 Rorug02G0506200 Rorug02G0508300 Rorug02G0509700 Rorug05G0378800 Rorug06G0096600 Rorug06G0096700 Rorug06G0221800
rosa_samantha Rh2AG577600 Rh2AG577700 Rh2AG577800 Rh2AG578000 Rh2AG578100 Rh2BG589200 Rh2CG559800 Rh2DG594400 Rh2DG594500 Rh2DG597800 Rh2DG599400 Rh2DG599500 Rh2DG599600 Rh6AG338400 Rh6BG211200 Rh6BG212600 Rh6BG342900 Rh6BG345600 Rh6CG214800 Rh6CG349100 Rh6CG350600 Rh6CG350700 Rh6CG352600 Rh7AG340800
rosa_wichuraiana Rw1G028590 Rw2G047980 Rw2G047990 Rw5G043360 Rw6G018180 Rw6G029200 Rw6G029450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1122
AccB1I GGYRCC 2 cut(s) 552, 1057
AccB7I CCANNNNNTGG 1 cut(s) 471
AccI GTMKAC 3 cut(s) 127, 179, 917
AciI CCGC 4 cut(s) 335, 966, 1252, 1307
AclWI GGATC 2 cut(s) 1031, 1133
AcoI YGGCCR 1 cut(s) 1256
AcsI RAATTY 1 cut(s) 252
AfaI GTAC 6 cut(s) 270, 440, 461, 564, 731, 1112
AfiI CCNNNNNNNGG 6 cut(s) 471, 549, 607, 732, 833, 1277
AflIII ACRYGT 1 cut(s) 926
AgsI TTSAA 5 cut(s) 82, 116, 206, 431, 775
AjiI CACGTC 1 cut(s) 1219
AjnI CCWGG 2 cut(s) 876, 1029
AluBI AGCT 5 cut(s) 370, 778, 952, 1134, 1299
AluI AGCT 5 cut(s) 370, 778, 952, 1134, 1299
Alw21I GWGCWC 3 cut(s) 220, 349, 703
Alw26I GTCTC 3 cut(s) 63, 623, 1117
Alw44I GTGCAC 1 cut(s) 699
AlwI GGATC 2 cut(s) 1031, 1133
AlwNI CAGNNNCTG 1 cut(s) 590
AoxI GGCC 3 cut(s) 824, 1256, 1279
ApaLI GTGCAC 1 cut(s) 699
ApeKI GCWGC 3 cut(s) 1131, 1296, 1299
ApoI RAATTY 1 cut(s) 252
AspS9I GGNCC 3 cut(s) 824, 1033, 1087
AsuC2I CCSGG 3 cut(s) 823, 835, 890
AsuHPI GGTGA 1 cut(s) 20
AsuII TTCGAA 1 cut(s) 1168
AvaII GGWCC 2 cut(s) 1033, 1087
BaeGI GKGCMC 1 cut(s) 703
BalI TGGCCA 1 cut(s) 1258
BanI GGYRCC 2 cut(s) 552, 1057
BarI GAAGNNNNNNTAC 2 cut(s) 428, 460
BbsI GAAGAC 1 cut(s) 1107
Bbv12I GWGCWC 3 cut(s) 220, 349, 703
BbvI GCAGC 3 cut(s) 1143, 1286, 1308
BccI CCATC 3 cut(s) 201, 974, 1290
BceAI ACGGC 2 cut(s) 195, 312
BcgI CGANNNNNNTGC 2 cut(s) 117, 151
BciT130I CCWGG 2 cut(s) 878, 1031
BcnI CCSGG 3 cut(s) 823, 835, 890
BcoDI GTCTC 3 cut(s) 63, 623, 1117
BfaI CTAG 1 cut(s) 1128
BfmI CTRYAG 1 cut(s) 547
BfuAI ACCTGC 1 cut(s) 1122
BisI GCNGC 3 cut(s) 1132, 1297, 1300
BlsI GCNGC 3 cut(s) 1133, 1298, 1301
BmcAI AGTACT 1 cut(s) 440
Bme1390I CCNGG 5 cut(s) 823, 835, 878, 890, 1031
Bme18I GGWCC 2 cut(s) 1033, 1087
BmgBI CACGTC 1 cut(s) 1219
BmgT120I GGNCC 3 cut(s) 824, 1033, 1087
BmiI GGNNCC 5 cut(s) 554, 724, 768, 1059, 1089
BmrFI CCNGG 5 cut(s) 823, 835, 878, 890, 1031
BmsI GCATC 1 cut(s) 143
BpiI GAAGAC 1 cut(s) 1107
BplI GAGNNNNNCTC 2 cut(s) 605, 637
BpmI CTGGAG 1 cut(s) 674
Bpu14I TTCGAA 1 cut(s) 1168
BpuEI CTTGAG 2 cut(s) 593, 992
BpuMI CCSGG 3 cut(s) 823, 835, 890
BsaBI GATNNNNATC 2 cut(s) 116, 321
BsaI GGTCTC 1 cut(s) 1117
BsaJI CCNNGG 2 cut(s) 877, 889
Bsc4I CCNNNNNNNGG 6 cut(s) 471, 549, 607, 732, 833, 1277
Bse118I RCCGGY 1 cut(s) 909
Bse1I ACTGG 4 cut(s) 637, 737, 1076, 1265
Bse3DI GCAATG 1 cut(s) 476
Bse8I GATNNNNATC 2 cut(s) 116, 321
BseBI CCWGG 2 cut(s) 878, 1031
BseDI CCNNGG 2 cut(s) 877, 889
BseGI GGATG 6 cut(s) 29, 193, 682, 909, 985, 1063
BseJI GATNNNNATC 2 cut(s) 116, 321
BseLI CCNNNNNNNGG 6 cut(s) 471, 549, 607, 732, 833, 1277
BseMI GCAATG 1 cut(s) 476
BseMII CTCAG 1 cut(s) 68
BseNI ACTGG 4 cut(s) 637, 737, 1076, 1265
BseRI GAGGAG 2 cut(s) 477, 480
BseSI GKGCMC 1 cut(s) 703
BseXI GCAGC 3 cut(s) 1143, 1286, 1308
BseYI CCCAGC 1 cut(s) 362
BshFI GGCC 3 cut(s) 826, 1258, 1281
BshNI GGYRCC 2 cut(s) 552, 1057
BsiHKAI GWGCWC 3 cut(s) 220, 349, 703
BsiSI CCGG 5 cut(s) 556, 822, 834, 889, 910
BslI CCNNNNNNNGG 6 cut(s) 471, 549, 607, 732, 833, 1277
BsmAI GTCTC 3 cut(s) 63, 623, 1117
BsnI GGCC 3 cut(s) 826, 1258, 1281
Bso31I GGTCTC 1 cut(s) 1117
Bsp119I TTCGAA 1 cut(s) 1168
Bsp1286I GDGCHC 3 cut(s) 220, 349, 703
Bsp143I GATC 3 cut(s) 91, 1023, 1138
BspACI CCGC 4 cut(s) 335, 966, 1252, 1307
BspANI GGCC 3 cut(s) 826, 1258, 1281
BspCNI CTCAG 1 cut(s) 67
BspLI GGNNCC 5 cut(s) 554, 724, 768, 1059, 1089
BspMI ACCTGC 1 cut(s) 1122
BspPI GGATC 2 cut(s) 1031, 1133
BspT104I TTCGAA 1 cut(s) 1168
BspT107I GGYRCC 2 cut(s) 552, 1057
BspTNI GGTCTC 1 cut(s) 1117
BsrDI GCAATG 1 cut(s) 476
BsrFI RCCGGY 1 cut(s) 909
BsrI ACTGG 4 cut(s) 637, 737, 1076, 1265
BssAI RCCGGY 1 cut(s) 909
BssECI CCNNGG 2 cut(s) 877, 889
BssMI GATC 3 cut(s) 91, 1023, 1138
BssNAI GTATAC 1 cut(s) 918
Bst1107I GTATAC 1 cut(s) 918
Bst2UI CCWGG 2 cut(s) 878, 1031
Bst4CI ACNGT 1 cut(s) 104
Bst6I CTCTTC 1 cut(s) 628
BstBI TTCGAA 1 cut(s) 1168
BstC8I GCNNGC 2 cut(s) 368, 911
BstDEI CTNAG 1 cut(s) 54
BstENI CCTNNNNNAGG 1 cut(s) 1275
BstF5I GGATG 6 cut(s) 29, 193, 682, 909, 985, 1063
BstKTI GATC 3 cut(s) 94, 1026, 1141
BstMAI GTCTC 3 cut(s) 63, 623, 1117
BstMBI GATC 3 cut(s) 91, 1023, 1138
BstMWI GCNNNNNNNGC 2 cut(s) 775, 1114
BstNI CCWGG 2 cut(s) 878, 1031
BstNSI RCATGY 1 cut(s) 1108
BstSCI CCNGG 5 cut(s) 821, 833, 876, 888, 1029
BstSFI CTRYAG 1 cut(s) 547
BstSLI GKGCMC 1 cut(s) 703
BstV1I GCAGC 3 cut(s) 1143, 1286, 1308
BstV2I GAAGAC 1 cut(s) 1107
BstX2I RGATCY 1 cut(s) 1023
BstXI CCANNNNNNTGG 1 cut(s) 370
BstYI RGATCY 1 cut(s) 1023
BstZ17I GTATAC 1 cut(s) 918
BsuRI GGCC 3 cut(s) 826, 1258, 1281
BtrI CACGTC 1 cut(s) 1219
BtsCI GGATG 6 cut(s) 29, 193, 682, 909, 985, 1063
BveI ACCTGC 1 cut(s) 1122
Cac8I GCNNGC 2 cut(s) 368, 911
CaiI CAGNNNCTG 1 cut(s) 590
Cfr10I RCCGGY 1 cut(s) 909
Cfr13I GGNCC 3 cut(s) 824, 1033, 1087
CseI GACGC 1 cut(s) 590
Csp6I GTAC 6 cut(s) 269, 439, 460, 563, 730, 1111
CviAII CATG 4 cut(s) 259, 332, 1105, 1245
CviQI GTAC 6 cut(s) 269, 439, 460, 563, 730, 1111
DdeI CTNAG 1 cut(s) 54
DpnI GATC 3 cut(s) 93, 1025, 1140
DpnII GATC 3 cut(s) 91, 1023, 1138
DraI TTTAAA 1 cut(s) 1014
EaeI YGGCCR 1 cut(s) 1256
Eam1104I CTCTTC 1 cut(s) 628
EarI CTCTTC 1 cut(s) 628
Eco31I GGTCTC 1 cut(s) 1117
Eco47I GGWCC 2 cut(s) 1033, 1087
EcoNI CCTNNNNNAGG 1 cut(s) 1275
EcoRII CCWGG 2 cut(s) 876, 1029
FaeI CATG 4 cut(s) 262, 335, 1108, 1248
FatI CATG 4 cut(s) 258, 331, 1104, 1244
FblI GTMKAC 3 cut(s) 127, 179, 917
Fnu4HI GCNGC 3 cut(s) 1132, 1297, 1300
FokI GGATG 6 cut(s) 16, 180, 669, 916, 992, 1050
Fsp4HI GCNGC 3 cut(s) 1132, 1297, 1300
FspBI CTAG 1 cut(s) 1128
GluI GCNGC 3 cut(s) 1132, 1297, 1300
GsaI CCCAGC 1 cut(s) 366
GsuI CTGGAG 1 cut(s) 674
HaeIII GGCC 3 cut(s) 826, 1258, 1281
HapII CCGG 5 cut(s) 556, 822, 834, 889, 910
HgaI GACGC 1 cut(s) 590
Hin1II CATG 4 cut(s) 262, 335, 1108, 1248
HincII GTYRAC 2 cut(s) 128, 180
HindII GTYRAC 2 cut(s) 128, 180
HinfI GANTC 9 cut(s) 35, 181, 317, 328, 539, 567, 647, 751, 854
HpaII CCGG 5 cut(s) 556, 822, 834, 889, 910
HphI GGTGA 1 cut(s) 20
Hpy166II GTNNAC 5 cut(s) 128, 180, 462, 701, 918
Hpy188I TCNGA 8 cut(s) 34, 230, 327, 544, 602, 628, 924, 1138
Hpy188III TCNNGA 2 cut(s) 79, 971
Hpy8I GTNNAC 5 cut(s) 128, 180, 462, 701, 918
Hpy99I CGWCG 1 cut(s) 216
HpyCH4III ACNGT 1 cut(s) 104
HpyCH4IV ACGT 2 cut(s) 928, 1218
HpyCH4V TGCA 7 cut(s) 47, 138, 156, 168, 453, 701, 1161
HpyF10VI GCNNNNNNNGC 2 cut(s) 775, 1114
HpyF3I CTNAG 1 cut(s) 54
HpySE526I ACGT 2 cut(s) 928, 1218
Hsp92II CATG 4 cut(s) 262, 335, 1108, 1248
KroI GCCGGC 1 cut(s) 909
KroNI GCCGGC 1 cut(s) 911
Kzo9I GATC 3 cut(s) 91, 1023, 1138
LmnI GCTCC 3 cut(s) 766, 949, 1139
Lsp1109I GCAGC 3 cut(s) 1143, 1286, 1308
LweI GCATC 1 cut(s) 143
MaeI CTAG 1 cut(s) 1128
MaeII ACGT 2 cut(s) 928, 1218
MaeIII GTNAC 1 cut(s) 239
MalI GATC 3 cut(s) 93, 1025, 1140
MboI GATC 3 cut(s) 91, 1023, 1138
MboII GAAGA 5 cut(s) 350, 615, 971, 1018, 1112
MfeI CAATTG 2 cut(s) 235, 312
MflI RGATCY 1 cut(s) 1023
MhlI GDGCHC 3 cut(s) 220, 349, 703
MlsI TGGCCA 1 cut(s) 1258
MluCI AATT 8 cut(s) 235, 252, 302, 312, 862, 1038, 1182, 1274
MluNI TGGCCA 1 cut(s) 1258
MlyI GAGTC 4 cut(s) 29, 175, 322, 561
MmeI TCCRAC 4 cut(s) 57, 567, 744, 967
Mox20I TGGCCA 1 cut(s) 1258
MroNI GCCGGC 1 cut(s) 909
MscI TGGCCA 1 cut(s) 1258
MseI TTAA 7 cut(s) 66, 341, 605, 1013, 1041, 1155, 1208
Msp20I TGGCCA 1 cut(s) 1258
MspA1I CMGCKG 1 cut(s) 1299
MspI CCGG 5 cut(s) 556, 822, 834, 889, 910
MspR9I CCNGG 5 cut(s) 823, 835, 878, 890, 1031
MunI CAATTG 2 cut(s) 235, 312
MvaI CCWGG 2 cut(s) 878, 1031
MwoI GCNNNNNNNGC 2 cut(s) 775, 1114
NaeI GCCGGC 1 cut(s) 911
NciI CCSGG 3 cut(s) 823, 835, 890
NdeII GATC 3 cut(s) 91, 1023, 1138
NgoMIV GCCGGC 1 cut(s) 909
NlaIII CATG 4 cut(s) 262, 335, 1108, 1248
NlaIV GGNNCC 5 cut(s) 554, 724, 768, 1059, 1089
NmuCI GTSAC 1 cut(s) 239
NspI RCATGY 1 cut(s) 1108
NspV TTCGAA 1 cut(s) 1168
PdiI GCCGGC 1 cut(s) 911
PfeI GAWTC 5 cut(s) 317, 539, 647, 751, 854
PflMI CCANNNNNTGG 1 cut(s) 471
PfoI TCCNGGA 1 cut(s) 1029
PkrI GCNGC 3 cut(s) 1133, 1298, 1301
PleI GAGTC 4 cut(s) 29, 175, 322, 561
PpsI GAGTC 4 cut(s) 29, 175, 322, 561
Psp6I CCWGG 2 cut(s) 876, 1029
PspFI CCCAGC 1 cut(s) 362
PspGI CCWGG 2 cut(s) 876, 1029
PspN4I GGNNCC 5 cut(s) 554, 724, 768, 1059, 1089
PspPI GGNCC 3 cut(s) 824, 1033, 1087
PstNI CAGNNNCTG 1 cut(s) 590
PsuI RGATCY 1 cut(s) 1023
PvuII CAGCTG 1 cut(s) 1299
RsaI GTAC 6 cut(s) 270, 440, 461, 564, 731, 1112
RsaNI GTAC 6 cut(s) 269, 439, 460, 563, 730, 1111
SalI GTCGAC 2 cut(s) 126, 178
SaqAI TTAA 7 cut(s) 66, 341, 605, 1013, 1041, 1155, 1208
SatI GCNGC 3 cut(s) 1132, 1297, 1300
Sau3AI GATC 3 cut(s) 91, 1023, 1138
Sau96I GGNCC 3 cut(s) 824, 1033, 1087
ScaI AGTACT 1 cut(s) 440
SchI GAGTC 4 cut(s) 29, 175, 322, 561
ScrFI CCNGG 5 cut(s) 823, 835, 878, 890, 1031
SduI GDGCHC 3 cut(s) 220, 349, 703
SfaNI GCATC 1 cut(s) 143
SfcI CTRYAG 1 cut(s) 547
SfuI TTCGAA 1 cut(s) 1168
SinI GGWCC 2 cut(s) 1033, 1087
SmlI CTYRAG 2 cut(s) 572, 971
SmoI CTYRAG 2 cut(s) 572, 971
Sse9I AATT 8 cut(s) 235, 252, 302, 312, 862, 1038, 1182, 1274
SsiI CCGC 4 cut(s) 335, 966, 1252, 1307
SspI AATATT 2 cut(s) 75, 1165
SspMI CTAG 1 cut(s) 1128
StyD4I CCNGG 5 cut(s) 821, 833, 876, 888, 1029
TaaI ACNGT 1 cut(s) 104
TaiI ACGT 2 cut(s) 931, 1221
TaqI TCGA 5 cut(s) 127, 179, 351, 780, 1168
TasI AATT 8 cut(s) 235, 252, 302, 312, 862, 1038, 1182, 1274
TatI WGTACW 2 cut(s) 438, 729
TfiI GAWTC 5 cut(s) 317, 539, 647, 751, 854
Tru1I TTAA 7 cut(s) 66, 341, 605, 1013, 1041, 1155, 1208
Tru9I TTAA 7 cut(s) 66, 341, 605, 1013, 1041, 1155, 1208
TseFI GTSAC 1 cut(s) 239
TseI GCWGC 3 cut(s) 1131, 1296, 1299
Tsp45I GTSAC 1 cut(s) 239
TspDTI ATGAA 5 cut(s) 264, 846, 922, 1016, 1113
TspGWI ACGGA 3 cut(s) 447, 524, 1135
Van91I CCANNNNNTGG 1 cut(s) 471
VneI GTGCAC 1 cut(s) 699
VpaK11BI GGWCC 2 cut(s) 1033, 1087
XagI CCTNNNNNAGG 1 cut(s) 1275
XapI RAATTY 1 cut(s) 252
XceI RCATGY 1 cut(s) 1108
XmiI GTMKAC 3 cut(s) 127, 179, 917
XspI CTAG 1 cut(s) 1128
ZrmI AGTACT 1 cut(s) 440
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.