Rw1G028590

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000216
Physical Location & Seq
Forward (+)
56262238 .. 56263629
1392 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G028590.1

Sequence Viewer

Length: 1392 bp
ATGTGCCGGCAGCCAGCCATGAGCGGTGGTGGTGATAGTTTTCCTGCTGCTTCGAAAAGAACTTTCATTCGAGCTCTGAATGGTACTAGTATTGATAATCTCCCCGATGAGGTATTGATTGAAATCCTTTGTCGACTTCCTTGCTACAAATTCGTTTCTGAAAGCAAGTTTGTGTCCAAGCGCTGGTGCACTATCACATCCAATCCTCACTTTATTCGCCGGTTTCTAAGTCTCCAAAGTGATCGTAAGAAAAACTGTACCCTGATAAACAGAAGGGGAGAAGAATTCCTTGATAGAATGTCTTCGACCTCTCAGCCGCTATGTCCGTTGTTCAAAAGAATCATGAGTTTCCATGGTCTGAAAGAAGAGCCGGTCGTGGAAGGTACATATAATGACCTAGTTTTGTGCTGCGCAAGCAAATATGAACAACGTGATTACTACATCTGCAATCCATACACAATGCAATGGCTTCCTCTTCCTCCCCCACCTCAACTAGTCCATTATGCGCCGGTGGGATTTACCTGCGATCTTCCCTATTATAACTGCAACAAAGACGGTGAGGTCCAGCTTAATGCCGAGTATCGGTGTGTTGTAGTGAGATTGATCTTGCCTTGTGGTCAGCGATTTTCATGCAAATTCAAAGTGCAGATATTCTCTTCCGAGACTGGTGAATGGAAAGAGTCAATTGTATCATCCCCATCGCCTGTTGGTGTTGAGATTGCTATCGATCGTAAGGTAATATCACCGTTCGCTTACAAGGGAATGCTATTTTGGGGTGATTTTGGTTGTGAACGCCGTTTTCTTATTGGATTGGATCCCTTCATGATCAACAGCACTATTAGTACTAATGGTGGTGATACAATTGATCACTATATATGCCGTTTTATAGAATTCAGACATGACTTTTCTCCCCCAGTGAGGTGCCTGGGTGAGTGCAGAGGTTGTTTGCGCATGGGCAGCCCCAATAGTGAAGGTCTTTTTACTTTTCACGATTTGACTGAAGAAGAAACGCATGGTGCACGACGTGCAATTGTGAAATATTTGAAATTGGAAACTATAAAGAACTTTCACTTCATGACCACTGCAATGTATCATGGGCATTACTGTTATTTTCAGGTGCTGGCTATTGATCCGAATAATGAAGATATCTTGTATGTCCAAAAACTTGAAGATGAATTAGATGGCAAGAAAGACGGAGACATTTTCAGGTGCAACATTACTACAAATGGGTACTCCAGGATAAATTGCTTCCCGATAGATGAAAAGCATCGAATTGAGTTGTCGTATGTCCACTTCCCACTTGTTGTGCCATGGTGGCCGACACCTCTTCCTAGACTACCACAACACACGCGCGCAGCCCACCTGAATCCTCAATCTTCATGGAACCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

463

Amino Acids

53.38

Weight (kDa)

7.75

Isoelectric Point (pI)

57.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 31 - 75 6e-06 F-box-like
b-prop_At3g26010-like PF24750 129 - 386 2.8e-08 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000216)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38860 AT5G38860
fragaria_vesca FvH4_2g24261 FvH4_2g24270 FvH4_3g35490 FvH4_6g03181 FvH4_6g03182 FvH4_6g03221 FvH4_6g03380 FvH4_6g05203 FvH4_6g31981 FvH4_6g32061 FvH4_6g37041 FvH4_6g39371 FvH4_6g45291 FvH4_6g45890 FvH4_6g46240 FvH4_6g46241 FvH4_6g46242 FvH4_6g46260 FvH4_6g46280 FvH4_6g46280 FvH4_6g46280 FvH4_6g46290 FvH4_6g46290 FvH4_6g46380
malus_domestica MD02G1008700.v1.1 MD02G1008900.v1.1 MD04G1180900.v1.1 MD04G1181200.v1.1 MD09G1075900.v1.1 MD09G1201600.v1.1 MD15G1017800.v1.1 MD17G1066600.v1.1
prunus_persica Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G512600_v2.0.a1 Prupe.3G059500_v2.0.a1 Prupe.3G059600_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.6G076400_v2.0.a1
pyrus_communis pycom02g00750 pycom03g20320 pycom09g00330 pycom11g08760 pycom17g04880 pycom17g06710 pycom17g19130
rosa_chinensis RchiOBHm_Chr2g0123691 RchiOBHm_Chr2g0164671 RchiOBHm_Chr2g0164681 RchiOBHm_Chr2g0164721 RchiOBHm_Chr2g0164741 RchiOBHm_Chr6g0275871 RchiOBHm_Chr6g0276071 RchiOBHm_Chr6g0291931 RchiOBHm_Chr6g0292091 RchiOBHm_Chr6g0292271 RchiOBHm_Chr7g0221261
rosa_laevigata RLG00000002165 RLG00000007725 RLG00000012062 RLG00000012543 RLG00000013427 RLG00000021441 RLG00000021477 RLG00000021478 RLG00000021480 RLG00000021481
rosa_multiflora Rmu_co8220318.1_g000001 Rmu_co8427407.1_g000001 Rmu_sc0000946.1_g000006 Rmu_sc0000946.1_g000007 Rmu_sc0000946.1_g000010 Rmu_sc0000946.1_g000012 Rmu_sc0000946.1_g000013 Rmu_sc0002030.1_g000015 Rmu_sc0002870.1_g000002 Rmu_sc0003200.1_g000004 Rmu_sc0004915.1_g000002 Rmu_sc0004991.1_g000006 Rmu_sc0006928.1_g000020 Rmu_sc0007384.1_g000001 Rmu_sc0030722.1_g000001 Rmu_sc0030723.1_g000001 Rmu_ssc0000076.1_g000019 Rmu_ssc0000076.1_g000025 Rmu_ssc0000318.1_g000001
rosa_roxburghii Rroxscaffold_2G00086340 Rroxscaffold_2G00086360 Rroxscaffold_2G00086370 Rroxscaffold_2G00086380 Rroxscaffold_2G00086830 Rroxscaffold_2G00087380 Rroxscaffold_2G00120420 Rroxscaffold_7G00175260 Rroxscaffold_7G00175600 Rroxscaffold_7G00177970 Rroxscaffold_7G00192830
rosa_rugosa Rorug02G0247400 Rorug02G0506200 Rorug02G0508300 Rorug02G0509700 Rorug05G0378800 Rorug06G0096600 Rorug06G0096700 Rorug06G0221800
rosa_samantha Rh2AG577600 Rh2AG577700 Rh2AG577800 Rh2AG578000 Rh2AG578100 Rh2BG589200 Rh2CG559800 Rh2DG594400 Rh2DG594500 Rh2DG597800 Rh2DG599400 Rh2DG599500 Rh2DG599600 Rh6AG338400 Rh6BG211200 Rh6BG212600 Rh6BG342900 Rh6BG345600 Rh6CG214800 Rh6CG349100 Rh6CG350600 Rh6CG350700 Rh6CG352600 Rh7AG340800
rosa_wichuraiana Rw1G028590 Rw2G047980 Rw2G047990 Rw5G043360 Rw6G018180 Rw6G029200 Rw6G029450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 540
AasI GACNNNNNNGTC 1 cut(s) 560
Acc16I TGCGCA 2 cut(s) 412, 950
Acc36I ACCTGC 1 cut(s) 530
AccB1I GGYRCC 1 cut(s) 921
AccB7I CCANNNNNTGG 1 cut(s) 183
AccBSI CCGCTC 1 cut(s) 24
AccI GTMKAC 1 cut(s) 133
AccII CGCG 2 cut(s) 1351, 1353
AciI CCGC 2 cut(s) 24, 317
AclWI GGATC 3 cut(s) 809, 822, 1124
AcoI YGGCCR 1 cut(s) 1316
AcsI RAATTY 4 cut(s) 149, 284, 635, 890
AcuI CTGAAG 1 cut(s) 1020
AdeI CACNNNGTG 1 cut(s) 1025
AfaI GTAC 5 cut(s) 85, 259, 385, 844, 1232
AfeI AGCGCT 1 cut(s) 182
AfiI CCNNNNNNNGG 4 cut(s) 109, 183, 582, 918
AgsI TTSAA 5 cut(s) 122, 334, 640, 1045, 1169
AhlI ACTAGT 2 cut(s) 86, 493
AjiI CACGTC 1 cut(s) 1025
AjnI CCWGG 2 cut(s) 924, 1235
AjuI GAANNNNNNNTTGG 2 cut(s) 754, 786
AluBI AGCT 2 cut(s) 74, 568
AluI AGCT 2 cut(s) 74, 568
Alw21I GWGCWC 3 cut(s) 76, 191, 1021
Alw26I GTCTC 3 cut(s) 236, 656, 1191
Alw44I GTGCAC 2 cut(s) 187, 1017
AlwI GGATC 3 cut(s) 809, 822, 1124
AlwNI CAGNNNCTG 1 cut(s) 1120
Aor51HI AGCGCT 1 cut(s) 182
AoxI GGCC 1 cut(s) 1316
ApaLI GTGCAC 2 cut(s) 187, 1017
ApeKI GCWGC 5 cut(s) 10, 47, 408, 957, 1355
ApoI RAATTY 4 cut(s) 149, 284, 635, 890
Asp700I GAANNNNTTC 1 cut(s) 301
AspLEI GCGC 6 cut(s) 183, 413, 508, 951, 1353, 1355
AspS9I GGNCC 1 cut(s) 562
AsuHPI GGTGA 7 cut(s) 44, 569, 680, 735, 788, 866, 941
AsuII TTCGAA 1 cut(s) 53
AvaII GGWCC 1 cut(s) 562
BaeGI GKGCMC 2 cut(s) 191, 1021
BamHI GGATCC 1 cut(s) 814
BanI GGYRCC 1 cut(s) 921
BanII GRGCYC 1 cut(s) 76
BarI GAAGNNNNNNTAC 2 cut(s) 1277, 1309
BbsI GAAGAC 1 cut(s) 294
Bbv12I GWGCWC 3 cut(s) 76, 191, 1021
BbvI GCAGC 5 cut(s) 22, 34, 395, 969, 1367
BccI CCATC 2 cut(s) 706, 1175
BceAI ACGGC 2 cut(s) 780, 864
BcgI CGANNNNNNTGC 4 cut(s) 123, 157, 612, 646
BciT130I CCWGG 2 cut(s) 926, 1237
BclI TGATCA 2 cut(s) 825, 865
BcoDI GTCTC 3 cut(s) 236, 656, 1191
BcuI ACTAGT 2 cut(s) 86, 493
BfaI CTAG 4 cut(s) 87, 398, 494, 1332
BfoI RGCGCY 1 cut(s) 184
BfuAI ACCTGC 1 cut(s) 530
BglI GCCNNNNNGGC 1 cut(s) 1315
BisI GCNGC 6 cut(s) 11, 48, 317, 409, 958, 1356
BlsI GCNGC 6 cut(s) 12, 49, 318, 410, 959, 1357
BmcAI AGTACT 1 cut(s) 844
Bme1390I CCNGG 2 cut(s) 926, 1237
Bme18I GGWCC 1 cut(s) 562
BmgBI CACGTC 1 cut(s) 1025
BmgT120I GGNCC 1 cut(s) 562
BmiI GGNNCC 3 cut(s) 816, 923, 1385
BmrFI CCNGG 2 cut(s) 926, 1237
BmrI ACTGGG 1 cut(s) 908
BmsI GCATC 1 cut(s) 1276
BmuI ACTGGG 1 cut(s) 908
BpiI GAAGAC 1 cut(s) 294
BpmI CTGGAG 1 cut(s) 1219
Bpu14I TTCGAA 1 cut(s) 53
Bsa29I ATCGAT 1 cut(s) 726
BsaBI GATNNNNATC 2 cut(s) 122, 722
BsaJI CCNNGG 3 cut(s) 352, 925, 1310
Bsc4I CCNNNNNNNGG 4 cut(s) 109, 183, 582, 918
Bse118I RCCGGY 4 cut(s) 6, 219, 370, 508
Bse1I ACTGG 2 cut(s) 670, 914
Bse3DI GCAATG 2 cut(s) 470, 1092
Bse8I GATNNNNATC 2 cut(s) 122, 722
BseBI CCWGG 2 cut(s) 926, 1237
BseCI ATCGAT 1 cut(s) 726
BseDI CCNNGG 3 cut(s) 352, 925, 1310
BseGI GGATG 2 cut(s) 197, 692
BseJI GATNNNNATC 2 cut(s) 122, 722
BseLI CCNNNNNNNGG 4 cut(s) 109, 183, 582, 918
BseMI GCAATG 2 cut(s) 470, 1092
BseMII CTCAG 1 cut(s) 326
BseNI ACTGG 2 cut(s) 670, 914
BsePI GCGCGC 1 cut(s) 1351
BseSI GKGCMC 2 cut(s) 191, 1021
BseXI GCAGC 5 cut(s) 22, 34, 395, 969, 1367
BsgI GTGCAG 2 cut(s) 665, 955
Bsh1236I CGCG 2 cut(s) 1351, 1353
Bsh1285I CGRYCG 2 cut(s) 375, 730
BshFI GGCC 1 cut(s) 1318
BshNI GGYRCC 1 cut(s) 921
BshVI ATCGAT 1 cut(s) 726
BsiEI CGRYCG 2 cut(s) 375, 730
BsiHKAI GWGCWC 3 cut(s) 76, 191, 1021
BsiSI CCGG 4 cut(s) 7, 220, 371, 509
BslI CCNNNNNNNGG 4 cut(s) 109, 183, 582, 918
BsmAI GTCTC 3 cut(s) 236, 656, 1191
BsmI GAATGC 1 cut(s) 768
BsnI GGCC 1 cut(s) 1318
Bsp119I TTCGAA 1 cut(s) 53
Bsp1286I GDGCHC 3 cut(s) 76, 191, 1021
Bsp143I GATC 8 cut(s) 241, 526, 603, 727, 814, 825, 865, 1129
Bsp19I CCATGG 2 cut(s) 352, 1310
BspACI CCGC 2 cut(s) 24, 317
BspANI GGCC 1 cut(s) 1318
BspCNI CTCAG 1 cut(s) 325
BspDI ATCGAT 1 cut(s) 726
BspFNI CGCG 2 cut(s) 1351, 1353
BspHI TCATGA 3 cut(s) 342, 822, 1074
BspLI GGNNCC 3 cut(s) 816, 923, 1385
BspMI ACCTGC 1 cut(s) 530
BspPI GGATC 3 cut(s) 809, 822, 1124
BspQI GCTCTTC 1 cut(s) 360
BspT104I TTCGAA 1 cut(s) 53
BspT107I GGYRCC 1 cut(s) 921
BsrBI CCGCTC 1 cut(s) 24
BsrDI GCAATG 2 cut(s) 470, 1092
BsrFI RCCGGY 4 cut(s) 6, 219, 370, 508
BsrI ACTGG 2 cut(s) 670, 914
BssAI RCCGGY 4 cut(s) 6, 219, 370, 508
BssECI CCNNGG 3 cut(s) 352, 925, 1310
BssHII GCGCGC 1 cut(s) 1351
BssMI GATC 8 cut(s) 241, 526, 603, 727, 814, 825, 865, 1129
BssT1I CCWWGG 2 cut(s) 352, 1310
Bst2UI CCWGG 2 cut(s) 926, 1237
Bst4CI ACNGT 4 cut(s) 257, 557, 747, 1106
Bst6I CTCTTC 4 cut(s) 360, 480, 661, 1332
BstAPI GCANNNNNTGC 1 cut(s) 1025
BstBI TTCGAA 1 cut(s) 53
BstC8I GCNNGC 5 cut(s) 8, 15, 415, 1122, 1353
BstDEI CTNAG 2 cut(s) 227, 312
BstDSI CCRYGG 2 cut(s) 352, 1310
BstF5I GGATG 2 cut(s) 197, 692
BstFNI CGCG 2 cut(s) 1351, 1353
BstH2I RGCGCY 1 cut(s) 184
BstHHI GCGC 6 cut(s) 183, 413, 508, 951, 1353, 1355
BstKTI GATC 8 cut(s) 244, 529, 606, 730, 817, 828, 868, 1132
BstMAI GTCTC 3 cut(s) 236, 656, 1191
BstMBI GATC 8 cut(s) 241, 526, 603, 727, 814, 825, 865, 1129
BstMCI CGRYCG 2 cut(s) 375, 730
BstMWI GCNNNNNNNGC 4 cut(s) 414, 957, 1025, 1315
BstNI CCWGG 2 cut(s) 926, 1237
BstSCI CCNGG 2 cut(s) 924, 1235
BstSLI GKGCMC 2 cut(s) 191, 1021
BstUI CGCG 2 cut(s) 1351, 1353
BstV1I GCAGC 5 cut(s) 22, 34, 395, 969, 1367
BstV2I GAAGAC 1 cut(s) 294
BstX2I RGATCY 1 cut(s) 814
BstYI RGATCY 1 cut(s) 814
Bsu15I ATCGAT 1 cut(s) 726
BsuRI GGCC 1 cut(s) 1318
BsuTUI ATCGAT 1 cut(s) 726
BtgI CCRYGG 2 cut(s) 352, 1310
BtgZI GCGATG 1 cut(s) 684
BtrI CACGTC 1 cut(s) 1025
BtsCI GGATG 2 cut(s) 197, 692
BtsI GCAGTG 1 cut(s) 1080
BtsIMutI CAGTG 2 cut(s) 921, 1080
BveI ACCTGC 1 cut(s) 530
Cac8I GCNNGC 5 cut(s) 8, 15, 415, 1122, 1353
CaiI CAGNNNCTG 1 cut(s) 1120
CciI TCATGA 3 cut(s) 342, 822, 1074
CfoI GCGC 6 cut(s) 183, 413, 508, 951, 1353, 1355
Cfr10I RCCGGY 4 cut(s) 6, 219, 370, 508
Cfr13I GGNCC 1 cut(s) 562
ClaI ATCGAT 1 cut(s) 726
Csp6I GTAC 5 cut(s) 84, 258, 384, 843, 1231
CviQI GTAC 5 cut(s) 84, 258, 384, 843, 1231
DdeI CTNAG 2 cut(s) 227, 312
DpnI GATC 8 cut(s) 243, 528, 605, 729, 816, 827, 867, 1131
DpnII GATC 8 cut(s) 241, 526, 603, 727, 814, 825, 865, 1129
DraIII CACNNNGTG 1 cut(s) 1025
DrdI GACNNNNNNGTC 1 cut(s) 560
DseDI GACNNNNNNGTC 1 cut(s) 560
EaeI YGGCCR 1 cut(s) 1316
Eam1104I CTCTTC 4 cut(s) 360, 480, 661, 1332
EarI CTCTTC 4 cut(s) 360, 480, 661, 1332
Ecl136II GAGCTC 1 cut(s) 74
Eco130I CCWWGG 2 cut(s) 352, 1310
Eco24I GRGCYC 1 cut(s) 76
Eco32I GATATC 1 cut(s) 1147
Eco47I GGWCC 1 cut(s) 562
Eco47III AGCGCT 1 cut(s) 182
Eco53kI GAGCTC 1 cut(s) 74
Eco57I CTGAAG 1 cut(s) 1020
EcoICRI GAGCTC 1 cut(s) 74
EcoRI GAATTC 2 cut(s) 284, 890
EcoRII CCWGG 2 cut(s) 924, 1235
EcoRV GATATC 1 cut(s) 1147
EcoT14I CCWWGG 2 cut(s) 352, 1310
EcoT38I GRGCYC 1 cut(s) 76
ErhI CCWWGG 2 cut(s) 352, 1310
FalI AAGNNNNNCTT 2 cut(s) 273, 305
FbaI TGATCA 2 cut(s) 825, 865
FblI GTMKAC 1 cut(s) 133
Fnu4HI GCNGC 6 cut(s) 11, 48, 317, 409, 958, 1356
FokI GGATG 2 cut(s) 184, 679
FriOI GRGCYC 1 cut(s) 76
Fsp4HI GCNGC 6 cut(s) 11, 48, 317, 409, 958, 1356
FspBI CTAG 4 cut(s) 87, 398, 494, 1332
FspI TGCGCA 2 cut(s) 412, 950
GlaI GCGC 6 cut(s) 182, 412, 507, 950, 1352, 1354
GluI GCNGC 6 cut(s) 11, 48, 317, 409, 958, 1356
GsuI CTGGAG 1 cut(s) 1219
HaeII RGCGCY 1 cut(s) 184
HaeIII GGCC 1 cut(s) 1318
HapII CCGG 4 cut(s) 7, 220, 371, 509
HhaI GCGC 6 cut(s) 183, 413, 508, 951, 1353, 1355
Hin6I GCGC 6 cut(s) 181, 411, 506, 949, 1351, 1353
HinP1I GCGC 6 cut(s) 181, 411, 506, 949, 1351, 1353
HincII GTYRAC 1 cut(s) 134
HindII GTYRAC 1 cut(s) 134
HinfI GANTC 3 cut(s) 339, 680, 1366
HpaII CCGG 4 cut(s) 7, 220, 371, 509
HphI GGTGA 7 cut(s) 44, 569, 680, 735, 788, 866, 941
Hpy166II GTNNAC 5 cut(s) 134, 189, 791, 1019, 1291
Hpy188I TCNGA 6 cut(s) 78, 160, 360, 661, 896, 1134
Hpy188III TCNNGA 5 cut(s) 343, 823, 989, 1075, 1252
Hpy8I GTNNAC 5 cut(s) 134, 189, 791, 1019, 1291
Hpy99I CGWCG 1 cut(s) 1026
HpyAV CCTTC 4 cut(s) 267, 374, 829, 965
HpyCH4III ACNGT 4 cut(s) 257, 557, 747, 1106
HpyCH4IV ACGT 2 cut(s) 430, 1024
HpyF10VI GCNNNNNNNGC 4 cut(s) 414, 957, 1025, 1315
HpyF3I CTNAG 2 cut(s) 227, 312
HpySE526I ACGT 2 cut(s) 430, 1024
HspAI GCGC 6 cut(s) 181, 411, 506, 949, 1351, 1353
KroI GCCGGC 1 cut(s) 6
KroNI GCCGGC 1 cut(s) 8
Ksp22I TGATCA 2 cut(s) 825, 865
Kzo9I GATC 8 cut(s) 241, 526, 603, 727, 814, 825, 865, 1129
LguI GCTCTTC 1 cut(s) 360
Lsp1109I GCAGC 5 cut(s) 22, 34, 395, 969, 1367
LweI GCATC 1 cut(s) 1276
MaeI CTAG 4 cut(s) 87, 398, 494, 1332
MaeII ACGT 2 cut(s) 430, 1024
MalI GATC 8 cut(s) 243, 528, 605, 729, 816, 827, 867, 1131
MbiI CCGCTC 1 cut(s) 24
MboI GATC 8 cut(s) 241, 526, 603, 727, 814, 825, 865, 1129
MfeI CAATTG 3 cut(s) 684, 861, 1029
MflI RGATCY 1 cut(s) 814
MhlI GDGCHC 3 cut(s) 76, 191, 1021
MlyI GAGTC 1 cut(s) 689
MroNI GCCGGC 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 301
MseI TTAA 1 cut(s) 570
MslI CAYNNNNRTG 1 cut(s) 1085
MspI CCGG 4 cut(s) 7, 220, 371, 509
MspR9I CCNGG 2 cut(s) 926, 1237
MunI CAATTG 3 cut(s) 684, 861, 1029
Mva1269I GAATGC 1 cut(s) 768
MvaI CCWGG 2 cut(s) 926, 1237
MvnI CGCG 2 cut(s) 1351, 1353
MwoI GCNNNNNNNGC 4 cut(s) 414, 957, 1025, 1315
NaeI GCCGGC 1 cut(s) 8
NcoI CCATGG 2 cut(s) 352, 1310
NdeII GATC 8 cut(s) 241, 526, 603, 727, 814, 825, 865, 1129
NgoMIV GCCGGC 1 cut(s) 6
NlaIV GGNNCC 3 cut(s) 816, 923, 1385
NmeAIII GCCGAG 1 cut(s) 601
NsbI TGCGCA 2 cut(s) 412, 950
NspV TTCGAA 1 cut(s) 53
PagI TCATGA 3 cut(s) 342, 822, 1074
PauI GCGCGC 1 cut(s) 1351
PciSI GCTCTTC 1 cut(s) 360
PctI GAATGC 1 cut(s) 768
PdiI GCCGGC 1 cut(s) 8
PdmI GAANNNNTTC 1 cut(s) 301
PfeI GAWTC 2 cut(s) 339, 1366
PflMI CCANNNNNTGG 1 cut(s) 183
PfoI TCCNGGA 1 cut(s) 1235
PkrI GCNGC 6 cut(s) 12, 49, 318, 410, 959, 1357
Ple19I CGATCG 1 cut(s) 730
PleI GAGTC 1 cut(s) 688
PpsI GAGTC 1 cut(s) 688
PsiI TTATAA 1 cut(s) 540
Psp124BI GAGCTC 1 cut(s) 76
Psp6I CCWGG 2 cut(s) 924, 1235
PspGI CCWGG 2 cut(s) 924, 1235
PspN4I GGNNCC 3 cut(s) 816, 923, 1385
PspPI GGNCC 1 cut(s) 562
PstNI CAGNNNCTG 1 cut(s) 1120
PsuI RGATCY 1 cut(s) 814
PteI GCGCGC 1 cut(s) 1351
PvuI CGATCG 1 cut(s) 730
RsaI GTAC 5 cut(s) 85, 259, 385, 844, 1232
RsaNI GTAC 5 cut(s) 84, 258, 384, 843, 1231
RseI CAYNNNNRTG 1 cut(s) 1085
SacI GAGCTC 1 cut(s) 76
SalI GTCGAC 1 cut(s) 132
SapI GCTCTTC 1 cut(s) 360
SaqAI TTAA 1 cut(s) 570
SatI GCNGC 6 cut(s) 11, 48, 317, 409, 958, 1356
Sau3AI GATC 8 cut(s) 241, 526, 603, 727, 814, 825, 865, 1129
Sau96I GGNCC 1 cut(s) 562
ScaI AGTACT 1 cut(s) 844
SchI GAGTC 1 cut(s) 689
ScrFI CCNGG 2 cut(s) 926, 1237
SduI GDGCHC 3 cut(s) 76, 191, 1021
SfaNI GCATC 1 cut(s) 1276
SfuI TTCGAA 1 cut(s) 53
SgrAI CRCCGGYG 1 cut(s) 508
SinI GGWCC 1 cut(s) 562
SmiMI CAYNNNNRTG 1 cut(s) 1085
SpeI ACTAGT 2 cut(s) 86, 493
SsiI CCGC 2 cut(s) 24, 317
SspI AATATT 1 cut(s) 1040
SspMI CTAG 4 cut(s) 87, 398, 494, 1332
SstI GAGCTC 1 cut(s) 76
StyD4I CCNGG 2 cut(s) 924, 1235
StyI CCWWGG 2 cut(s) 352, 1310
TaaI ACNGT 4 cut(s) 257, 557, 747, 1106
TaiI ACGT 2 cut(s) 433, 1027
TaqI TCGA 6 cut(s) 53, 70, 133, 305, 726, 1270
TatI WGTACW 1 cut(s) 842
TauI GCSGC 1 cut(s) 319
TfiI GAWTC 2 cut(s) 339, 1366
Tru1I TTAA 1 cut(s) 570
Tru9I TTAA 1 cut(s) 570
TscAI CASTG 2 cut(s) 921, 1087
TseI GCWGC 5 cut(s) 10, 47, 408, 957, 1355
TspDTI ATGAA 9 cut(s) 55, 438, 618, 811, 1063, 1155, 1188, 1275, 1368
TspGWI ACGGA 2 cut(s) 315, 1209
TspRI CASTG 2 cut(s) 921, 1087
Van91I CCANNNNNTGG 1 cut(s) 183
VneI GTGCAC 2 cut(s) 187, 1017
VpaK11BI GGWCC 1 cut(s) 562
XapI RAATTY 4 cut(s) 149, 284, 635, 890
XmiI GTMKAC 1 cut(s) 133
XmnI GAANNNNTTC 1 cut(s) 301
XspI CTAG 4 cut(s) 87, 398, 494, 1332
ZrmI AGTACT 1 cut(s) 844
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.