FvH4_6g46241

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000216
Physical Location & Seq
Forward (+)
35307837 .. 35310529
2693 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g46241.t1

Sequence Viewer

Length: 1767 bp
ATGAGAGGTGGTGATAGTACTAGTACTCCTTTGAAAAGAAGTCACAGTAGAATATCCCGGTTGCCTTCCTTTGAAGCACTACCAGCATCCGATTGTATTTATGATCACTCAAAAAAAGCAGTGGCAAGAAGACCATCATCGAAACCTATGAATATTTGTATCGATGATCTCCCTGATAACGTATTGGTTGAAATTCTTTGTCGACTTCCTTGCTATAAATCTGTTCATCAGTGCAAGGTTGTGTCCAAGAGGTGGTGCGCTCTCACATCTAGTTCTTACTTCATTACCCGCCTCTTATCTATTCGAAGTGATGATCATCAACAACCACCAATAATGCGTACTCTGATTAACGAAAGCGGGTATGAATTCTTGACAAAAATGTCGTCGTCCTCGGCTAAGCCGCTAAGCCCATTGTTGGAAAGAATGAAGAAGTTTCACTCTTTGAAGAATGAGCCTGTGGTGGTATCCTCATATAATGACCTAGTTTTGTGTTGTGCAAACAAGTATGAAAAACGTGATTTCTACATCTGCAATCCATACACACTCCAATGGGTTCCTCTTCCTCCCCCTCCCCCTCTCCCATTTGAAGGTGACGTGAATGTACCAGTAGGATTAATCTGTGATCACTCCTACTATAAATGTGAGAAAGACGATCAGGGCAGACATATTATCCAGCTTAATCCTGAGTATAGATGCAAGGTTGTGAGATTAACCTTTCCCCGTTGTAAGGAAATATTTATAACTACATGCAAAACATTCAAAGCGCAGATCTTCTCTACCGAGACAGGTGAATGGACAGAGTCAATTGTATCATTACCAACAGACATTAAGTTTCGTAGAATCAACTGCACAGCTAACTTCATTTACAAGGGAATGCTTTTCTGGAGTTGTTTGTATGAAGCCAACTTTCTAATTGGATTGGATCCGTTCATGATCTCCAGCCGTAGTAGTGTTGCTAATGCTGATGATACTACTGATCACTATGGATGTCATTTGGTTGAATTAGAAATAGATCGCTTTAATTTGTTTCGATGCGTAGGTACATACAGAGGGTGTATGCGTGTGTGTGAGTACAACAGTGACGCTCGAGTTTTGTCTGTGCGGGATTTGAATGAAGAAGAAATATTCCATGGCGGAACTAGTGTTAAATTGTGTGTGGATAATATGGTGAAGGTGTACTCATTAGACAAGCAAATGACGCCGGTTGTTGATCTTGTGCGAAATTTTATGCTAGGTTTTGACCCAGAAAAGGACGATATCTTGTATTTCAAAAGAGCTGCAGACGGAGACATAGTCAGGTGCCTGAAAAGGGTGGAATTGTTTCCAGCTCCATCTATCTCCCACTTGTGCTCCCATGGTGGCCAACACCAATTCCTAAGCTACCACAACATTGCTATCCCAACCGAAGCCCTCCACATCCATAGAGCGATGGAAGCTAAAGCGCAAACATGCATGACAAATTTTAGCAATAAATTTCTTGAGACGGCGCAAAAACTCAGGGGCTTGAGGCACAACGACGTCGTTCGACGTATCGGCTTGGCCTGCTTCACGCTCAAGATTCACGGCGGCGTCAAGCTGCACCGGAGGAGCCGCGTCAACGACATCGCCACCGTGAACAACCGCGTCGATATGGACCGGTGGACGAACGCCGGATTCTCAACCGGTGCTAGCTCCTCCGGCGGTTCTTCATCGTCGGGTTCCATGTTTTCCGGAGAGAGGTTTCTTGGCGTTGAAGAATGTGGACTATCTGAGACTGGGTTGATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

589

Amino Acids

66.65

Weight (kDa)

8.58

Isoelectric Point (pI)

49.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 54 - 96 5.6e-06 F-box-like
F-box PF00646 54 - 94 9.7e-06 F-box domain
b-prop_At3g26010-like PF24750 147 - 389 2.6e-07 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000216)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G38860 AT5G38860
fragaria_vesca FvH4_2g24261 FvH4_2g24270 FvH4_3g35490 FvH4_6g03181 FvH4_6g03182 FvH4_6g03221 FvH4_6g03380 FvH4_6g05203 FvH4_6g31981 FvH4_6g32061 FvH4_6g37041 FvH4_6g39371 FvH4_6g45291 FvH4_6g45890 FvH4_6g46240 FvH4_6g46241 FvH4_6g46242 FvH4_6g46260 FvH4_6g46280 FvH4_6g46280 FvH4_6g46280 FvH4_6g46290 FvH4_6g46290 FvH4_6g46380
malus_domestica MD02G1008700.v1.1 MD02G1008900.v1.1 MD04G1180900.v1.1 MD04G1181200.v1.1 MD09G1075900.v1.1 MD09G1201600.v1.1 MD15G1017800.v1.1 MD17G1066600.v1.1
prunus_persica Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509300_v2.0.a1 Prupe.1G509700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G510700_v2.0.a1 Prupe.1G512600_v2.0.a1 Prupe.3G059500_v2.0.a1 Prupe.3G059600_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.3G248100_v2.0.a1 Prupe.6G076400_v2.0.a1
pyrus_communis pycom02g00750 pycom03g20320 pycom09g00330 pycom11g08760 pycom17g04880 pycom17g06710 pycom17g19130
rosa_chinensis RchiOBHm_Chr2g0123691 RchiOBHm_Chr2g0164671 RchiOBHm_Chr2g0164681 RchiOBHm_Chr2g0164721 RchiOBHm_Chr2g0164741 RchiOBHm_Chr6g0275871 RchiOBHm_Chr6g0276071 RchiOBHm_Chr6g0291931 RchiOBHm_Chr6g0292091 RchiOBHm_Chr6g0292271 RchiOBHm_Chr7g0221261
rosa_laevigata RLG00000002165 RLG00000007725 RLG00000012062 RLG00000012543 RLG00000013427 RLG00000021441 RLG00000021477 RLG00000021478 RLG00000021480 RLG00000021481
rosa_multiflora Rmu_co8220318.1_g000001 Rmu_co8427407.1_g000001 Rmu_sc0000946.1_g000006 Rmu_sc0000946.1_g000007 Rmu_sc0000946.1_g000010 Rmu_sc0000946.1_g000012 Rmu_sc0000946.1_g000013 Rmu_sc0002030.1_g000015 Rmu_sc0002870.1_g000002 Rmu_sc0003200.1_g000004 Rmu_sc0004915.1_g000002 Rmu_sc0004991.1_g000006 Rmu_sc0006928.1_g000020 Rmu_sc0007384.1_g000001 Rmu_sc0030722.1_g000001 Rmu_sc0030723.1_g000001 Rmu_ssc0000076.1_g000019 Rmu_ssc0000076.1_g000025 Rmu_ssc0000318.1_g000001
rosa_roxburghii Rroxscaffold_2G00086340 Rroxscaffold_2G00086360 Rroxscaffold_2G00086370 Rroxscaffold_2G00086380 Rroxscaffold_2G00086830 Rroxscaffold_2G00087380 Rroxscaffold_2G00120420 Rroxscaffold_7G00175260 Rroxscaffold_7G00175600 Rroxscaffold_7G00177970 Rroxscaffold_7G00192830
rosa_rugosa Rorug02G0247400 Rorug02G0506200 Rorug02G0508300 Rorug02G0509700 Rorug05G0378800 Rorug06G0096600 Rorug06G0096700 Rorug06G0221800
rosa_samantha Rh2AG577600 Rh2AG577700 Rh2AG577800 Rh2AG578000 Rh2AG578100 Rh2BG589200 Rh2CG559800 Rh2DG594400 Rh2DG594500 Rh2DG597800 Rh2DG599400 Rh2DG599500 Rh2DG599600 Rh6AG338400 Rh6BG211200 Rh6BG212600 Rh6BG342900 Rh6BG345600 Rh6CG214800 Rh6CG349100 Rh6CG350600 Rh6CG350700 Rh6CG352600 Rh7AG340800
rosa_wichuraiana Rw1G028590 Rw2G047980 Rw2G047990 Rw5G043360 Rw6G018180 Rw6G029200 Rw6G029450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 740
AasI GACNNNNNNGTC 1 cut(s) 379
AatII GACGTC 1 cut(s) 1521
AccB1I GGYRCC 1 cut(s) 1299
AccB7I CCANNNNNTGG 1 cut(s) 252
AccI GTMKAC 1 cut(s) 202
AccII CGCG 2 cut(s) 1593, 1623
AccIII TCCGGA 1 cut(s) 1709
AciI CCGC 9 cut(s) 289, 357, 401, 1102, 1134, 1566, 1591, 1621, 1680
AclWI GGATC 2 cut(s) 917, 930
AcoI YGGCCR 1 cut(s) 1360
AcsI RAATTY 5 cut(s) 192, 365, 1222, 1459, 1472
AcyI GRCGYC 3 cut(s) 1199, 1518, 1569
AfaI GTAC 7 cut(s) 19, 25, 340, 603, 1042, 1073, 1178
AfiI CCNNNNNNNGG 7 cut(s) 252, 415, 587, 727, 1249, 1309, 1716
AgeI ACCGGT 2 cut(s) 1635, 1661
AhlI ACTAGT 2 cut(s) 20, 1139
AjiI CACGTC 1 cut(s) 595
AluBI AGCT 8 cut(s) 676, 854, 1277, 1328, 1380, 1436, 1576, 1671
AluI AGCT 8 cut(s) 676, 854, 1277, 1328, 1380, 1436, 1576, 1671
Alw21I GWGCWC 1 cut(s) 1352
Alw26I GTCTC 4 cut(s) 776, 1281, 1475, 1745
AlwI GGATC 2 cut(s) 917, 930
Ama87I CYCGRG 1 cut(s) 1086
Aor13HI TCCGGA 1 cut(s) 1709
AoxI GGCC 2 cut(s) 1360, 1539
ApeKI GCWGC 2 cut(s) 1277, 1576
ApoI RAATTY 5 cut(s) 192, 365, 1222, 1459, 1472
ArsI GACNNNNNNTTYG 2 cut(s) 368, 400
AseI ATTAAT 1 cut(s) 614
AsiGI ACCGGT 2 cut(s) 1635, 1661
Asp700I GAANNNNTTC 1 cut(s) 1320
AspLEI GCGC 4 cut(s) 260, 766, 1444, 1489
AspS9I GGNCC 1 cut(s) 1633
AsuC2I CCSGG 1 cut(s) 58
AsuHPI GGTGA 4 cut(s) 23, 602, 800, 1180
AsuII TTCGAA 1 cut(s) 304
AsuNHI GCTAGC 1 cut(s) 1667
AvaI CYCGRG 1 cut(s) 1086
AvaII GGWCC 1 cut(s) 1633
BalI TGGCCA 1 cut(s) 1362
BamHI GGATCC 1 cut(s) 922
BanI GGYRCC 1 cut(s) 1299
BbsI GAAGAC 1 cut(s) 136
Bbv12I GWGCWC 1 cut(s) 1352
BbvI GCAGC 2 cut(s) 1264, 1563
BccI CCATC 3 cut(s) 142, 1339, 1423
BceAI ACGGC 3 cut(s) 927, 1500, 1579
BcgI CGANNNNNNTGC 2 cut(s) 192, 226
BciVI GTATCC 1 cut(s) 475
BclI TGATCA 4 cut(s) 103, 313, 622, 976
BcnI CCSGG 1 cut(s) 58
BcoDI GTCTC 4 cut(s) 776, 1281, 1475, 1745
BcuI ACTAGT 2 cut(s) 20, 1139
BfaI CTAG 6 cut(s) 21, 270, 482, 1140, 1232, 1668
BfmI CTRYAG 1 cut(s) 1278
BfuI GTATCC 1 cut(s) 475
BglII AGATCT 1 cut(s) 768
BisI GCNGC 5 cut(s) 401, 1278, 1567, 1577, 1591
BlpI GCTNAGC 2 cut(s) 396, 404
BlsI GCNGC 5 cut(s) 402, 1279, 1568, 1578, 1592
BmcAI AGTACT 2 cut(s) 19, 25
Bme1390I CCNGG 1 cut(s) 58
Bme18I GGWCC 1 cut(s) 1633
BmeT110I CYCGRG 1 cut(s) 1086
BmgBI CACGTC 1 cut(s) 595
BmgT120I GGNCC 1 cut(s) 1633
BmiI GGNNCC 5 cut(s) 555, 924, 1301, 1589, 1699
BmrFI CCNGG 1 cut(s) 58
BmrI ACTGGG 1 cut(s) 1764
BmsI GCATC 3 cut(s) 95, 683, 1022
BmtI GCTAGC 1 cut(s) 1671
BmuI ACTGGG 1 cut(s) 1764
BpiI GAAGAC 1 cut(s) 136
BpmI CTGGAG 2 cut(s) 904, 922
Bpu10I CCTNAGC 1 cut(s) 1376
Bpu1102I GCTNAGC 2 cut(s) 396, 404
Bpu14I TTCGAA 1 cut(s) 304
BpuEI CTTGAG 3 cut(s) 1499, 1525, 1538
BpuMI CCSGG 1 cut(s) 58
Bsa29I ATCGAT 1 cut(s) 162
BsaBI GATNNNNATC 1 cut(s) 315
BsaHI GRCGYC 3 cut(s) 1199, 1518, 1569
BsaJI CCNNGG 3 cut(s) 390, 1129, 1354
BsaWI WCCGGW 4 cut(s) 1581, 1635, 1661, 1709
BsaXI ACNNNNNCTCC 6 cut(s) 10, 40, 1278, 1308, 1334, 1364
Bsc4I CCNNNNNNNGG 7 cut(s) 252, 415, 587, 727, 1249, 1309, 1716
Bse118I RCCGGY 3 cut(s) 1201, 1635, 1661
Bse1I ACTGG 2 cut(s) 605, 1759
Bse3DI GCAATG 1 cut(s) 1389
Bse8I GATNNNNATC 1 cut(s) 315
BseAI TCCGGA 1 cut(s) 1709
BseCI ATCGAT 1 cut(s) 162
BseDI CCNNGG 3 cut(s) 390, 1129, 1354
BseGI GGATG 3 cut(s) 86, 992, 1416
BseJI GATNNNNATC 1 cut(s) 315
BseLI CCNNNNNNNGG 7 cut(s) 252, 415, 587, 727, 1249, 1309, 1716
BseMI GCAATG 1 cut(s) 1389
BseMII CTCAG 3 cut(s) 675, 1510, 1740
BseNI ACTGG 2 cut(s) 605, 1759
BseRI GAGGAG 2 cut(s) 1600, 1663
BseXI GCAGC 2 cut(s) 1264, 1563
BsgI GTGCAG 2 cut(s) 832, 1562
Bsh1236I CGCG 2 cut(s) 1593, 1623
BshFI GGCC 2 cut(s) 1362, 1541
BshNI GGYRCC 1 cut(s) 1299
BshTI ACCGGT 2 cut(s) 1635, 1661
BshVI ATCGAT 1 cut(s) 162
BsiHKAI GWGCWC 1 cut(s) 1352
BsiHKCI CYCGRG 1 cut(s) 1086
BsiSI CCGG 8 cut(s) 58, 1202, 1582, 1636, 1650, 1662, 1677, 1710
BslI CCNNNNNNNGG 7 cut(s) 252, 415, 587, 727, 1249, 1309, 1716
BsmAI GTCTC 4 cut(s) 776, 1281, 1475, 1745
BsmBI CGTCTC 1 cut(s) 1475
BsmI GAATGC 1 cut(s) 879
BsnI GGCC 2 cut(s) 1362, 1541
BsoBI CYCGRG 1 cut(s) 1086
Bsp119I TTCGAA 1 cut(s) 304
Bsp1286I GDGCHC 1 cut(s) 1352
Bsp13I TCCGGA 1 cut(s) 1709
Bsp1720I GCTNAGC 2 cut(s) 396, 404
Bsp19I CCATGG 2 cut(s) 1129, 1354
BspACI CCGC 9 cut(s) 289, 357, 401, 1102, 1134, 1566, 1591, 1621, 1680
BspANI GGCC 2 cut(s) 1362, 1541
BspCNI CTCAG 3 cut(s) 676, 1509, 1741
BspDI ATCGAT 1 cut(s) 162
BspEI TCCGGA 1 cut(s) 1709
BspFNI CGCG 2 cut(s) 1593, 1623
BspHI TCATGA 1 cut(s) 930
BspLI GGNNCC 5 cut(s) 555, 924, 1301, 1589, 1699
BspMAI CTGCAG 1 cut(s) 1282
BspOI GCTAGC 1 cut(s) 1671
BspPI GGATC 2 cut(s) 917, 930
BspT104I TTCGAA 1 cut(s) 304
BspT107I GGYRCC 1 cut(s) 1299
BsrDI GCAATG 1 cut(s) 1389
BsrFI RCCGGY 3 cut(s) 1201, 1635, 1661
BsrI ACTGG 2 cut(s) 605, 1759
BssAI RCCGGY 3 cut(s) 1201, 1635, 1661
BssECI CCNNGG 3 cut(s) 390, 1129, 1354
BssNI GRCGYC 3 cut(s) 1199, 1518, 1569
BssT1I CCWWGG 2 cut(s) 1129, 1354
Bst4CI ACNGT 3 cut(s) 47, 1079, 1612
Bst6I CTCTTC 1 cut(s) 564
BstACI GRCGYC 3 cut(s) 1199, 1518, 1569
BstBI TTCGAA 1 cut(s) 304
BstC8I GCNNGC 2 cut(s) 1543, 1669
BstDEI CTNAG 6 cut(s) 396, 404, 684, 1376, 1496, 1749
BstDSI CCRYGG 2 cut(s) 1129, 1354
BstF5I GGATG 3 cut(s) 86, 992, 1416
BstFNI CGCG 2 cut(s) 1593, 1623
BstHHI GCGC 4 cut(s) 260, 766, 1444, 1489
BstMAI GTCTC 4 cut(s) 776, 1281, 1475, 1745
BstMWI GCNNNNNNNGC 5 cut(s) 83, 1198, 1433, 1542, 1677
BstNSI RCATGY 2 cut(s) 750, 1452
BstSCI CCNGG 1 cut(s) 56
BstSFI CTRYAG 1 cut(s) 1278
BstUI CGCG 2 cut(s) 1593, 1623
BstV1I GCAGC 2 cut(s) 1264, 1563
BstV2I GAAGAC 1 cut(s) 136
BstX2I RGATCY 2 cut(s) 768, 922
BstYI RGATCY 2 cut(s) 768, 922
Bsu15I ATCGAT 1 cut(s) 162
BsuI GTATCC 1 cut(s) 475
BsuRI GGCC 2 cut(s) 1362, 1541
BsuTUI ATCGAT 1 cut(s) 162
BtgI CCRYGG 2 cut(s) 1129, 1354
BtgZI GCGATG 2 cut(s) 1442, 1588
BtrI CACGTC 1 cut(s) 595
BtsCI GGATG 3 cut(s) 86, 992, 1416
BtsI GCAGTG 1 cut(s) 126
BtsIMutI CAGTG 3 cut(s) 126, 236, 1084
Cac8I GCNNGC 2 cut(s) 1543, 1669
CciI TCATGA 1 cut(s) 930
CfoI GCGC 4 cut(s) 260, 766, 1444, 1489
Cfr10I RCCGGY 3 cut(s) 1201, 1635, 1661
Cfr13I GGNCC 1 cut(s) 1633
ClaI ATCGAT 1 cut(s) 162
CseI GACGC 5 cut(s) 1091, 1207, 1558, 1582, 1612
Csp6I GTAC 7 cut(s) 18, 24, 339, 602, 1041, 1072, 1177
CspAI ACCGGT 2 cut(s) 1635, 1661
CviAII CATG 7 cut(s) 747, 931, 1130, 1355, 1449, 1453, 1702
CviQI GTAC 7 cut(s) 18, 24, 339, 602, 1041, 1072, 1177
DdeI CTNAG 6 cut(s) 396, 404, 684, 1376, 1496, 1749
DrdI GACNNNNNNGTC 1 cut(s) 379
DseDI GACNNNNNNGTC 1 cut(s) 379
EaeI YGGCCR 1 cut(s) 1360
Eam1104I CTCTTC 1 cut(s) 564
EarI CTCTTC 1 cut(s) 564
EciI GGCGGA 1 cut(s) 1149
Eco130I CCWWGG 2 cut(s) 1129, 1354
Eco32I GATATC 1 cut(s) 1258
Eco47I GGWCC 1 cut(s) 1633
Eco88I CYCGRG 1 cut(s) 1086
EcoRI GAATTC 1 cut(s) 365
EcoRV GATATC 1 cut(s) 1258
EcoT14I CCWWGG 2 cut(s) 1129, 1354
EcoT22I ATGCAT 1 cut(s) 1454
ErhI CCWWGG 2 cut(s) 1129, 1354
Esp3I CGTCTC 1 cut(s) 1475
FaeI CATG 7 cut(s) 750, 934, 1133, 1358, 1452, 1456, 1705
FatI CATG 7 cut(s) 746, 930, 1129, 1354, 1448, 1452, 1701
FauI CCCGC 3 cut(s) 296, 350, 1095
FbaI TGATCA 4 cut(s) 103, 313, 622, 976
FblI GTMKAC 1 cut(s) 202
Fnu4HI GCNGC 5 cut(s) 401, 1278, 1567, 1577, 1591
FokI GGATG 3 cut(s) 73, 999, 1403
Fsp4HI GCNGC 5 cut(s) 401, 1278, 1567, 1577, 1591
FspBI CTAG 6 cut(s) 21, 270, 482, 1140, 1232, 1668
GlaI GCGC 4 cut(s) 259, 765, 1443, 1488
GluI GCNGC 5 cut(s) 401, 1278, 1567, 1577, 1591
GsuI CTGGAG 2 cut(s) 904, 922
HaeIII GGCC 2 cut(s) 1362, 1541
HapII CCGG 8 cut(s) 58, 1202, 1582, 1636, 1650, 1662, 1677, 1710
HgaI GACGC 5 cut(s) 1091, 1207, 1558, 1582, 1612
HhaI GCGC 4 cut(s) 260, 766, 1444, 1489
Hin1I GRCGYC 3 cut(s) 1199, 1518, 1569
Hin1II CATG 7 cut(s) 750, 934, 1133, 1358, 1452, 1456, 1705
Hin6I GCGC 4 cut(s) 258, 764, 1442, 1487
HinP1I GCGC 4 cut(s) 258, 764, 1442, 1487
HincII GTYRAC 2 cut(s) 203, 1597
HindII GTYRAC 2 cut(s) 203, 1597
HinfI GANTC 4 cut(s) 800, 840, 1558, 1653
HpaII CCGG 8 cut(s) 58, 1202, 1582, 1636, 1650, 1662, 1677, 1710
HphI GGTGA 4 cut(s) 23, 602, 800, 1180
Hpy166II GTNNAC 6 cut(s) 203, 1177, 1597, 1615, 1641, 1742
Hpy188I TCNGA 4 cut(s) 91, 345, 1750, 1766
Hpy188III TCNNGA 7 cut(s) 370, 683, 883, 931, 1478, 1555, 1710
Hpy8I GTNNAC 6 cut(s) 203, 1177, 1597, 1615, 1641, 1742
Hpy99I CGWCG 6 cut(s) 388, 1520, 1523, 1530, 1628, 1696
HpyAV CCTTC 3 cut(s) 75, 581, 1165
HpyCH4III ACNGT 3 cut(s) 47, 1079, 1612
HpyCH4IV ACGT 5 cut(s) 180, 514, 594, 1518, 1528
HpyCH4V TGCA 9 cut(s) 234, 497, 531, 696, 750, 849, 1280, 1452, 1579
HpyF10VI GCNNNNNNNGC 5 cut(s) 83, 1198, 1433, 1542, 1677
HpyF3I CTNAG 6 cut(s) 396, 404, 684, 1376, 1496, 1749
HpySE526I ACGT 5 cut(s) 180, 514, 594, 1518, 1528
Hsp92I GRCGYC 3 cut(s) 1199, 1518, 1569
Hsp92II CATG 7 cut(s) 750, 934, 1133, 1358, 1452, 1456, 1705
HspAI GCGC 4 cut(s) 258, 764, 1442, 1487
Kpn2I TCCGGA 1 cut(s) 1709
Ksp22I TGATCA 4 cut(s) 103, 313, 622, 976
LmnI GCTCC 4 cut(s) 1333, 1355, 1587, 1676
Lsp1109I GCAGC 2 cut(s) 1264, 1563
LweI GCATC 3 cut(s) 95, 683, 1022
MaeI CTAG 6 cut(s) 21, 270, 482, 1140, 1232, 1668
MaeII ACGT 5 cut(s) 180, 514, 594, 1518, 1528
MaeIII GTNAC 3 cut(s) 41, 590, 1079
MboII GAAGA 9 cut(s) 141, 439, 457, 551, 763, 1127, 1130, 1677, 1745
MfeI CAATTG 1 cut(s) 804
MflI RGATCY 2 cut(s) 768, 922
MhlI GDGCHC 1 cut(s) 1352
MlsI TGGCCA 1 cut(s) 1362
MluNI TGGCCA 1 cut(s) 1362
MlyI GAGTC 1 cut(s) 809
MmeI TCCRAC 1 cut(s) 396
Mox20I TGGCCA 1 cut(s) 1362
Mph1103I ATGCAT 1 cut(s) 1454
MroI TCCGGA 1 cut(s) 1709
MroXI GAANNNNTTC 1 cut(s) 1320
MscI TGGCCA 1 cut(s) 1362
MseI TTAA 7 cut(s) 348, 614, 678, 710, 828, 1020, 1146
MslI CAYNNNNRTG 1 cut(s) 547
Msp20I TGGCCA 1 cut(s) 1362
MspI CCGG 8 cut(s) 58, 1202, 1582, 1636, 1650, 1662, 1677, 1710
MspR9I CCNGG 1 cut(s) 58
MunI CAATTG 1 cut(s) 804
Mva1269I GAATGC 1 cut(s) 879
MvnI CGCG 2 cut(s) 1593, 1623
MwoI GCNNNNNNNGC 5 cut(s) 83, 1198, 1433, 1542, 1677
NciI CCSGG 1 cut(s) 58
NcoI CCATGG 2 cut(s) 1129, 1354
NheI GCTAGC 1 cut(s) 1667
NlaIII CATG 7 cut(s) 750, 934, 1133, 1358, 1452, 1456, 1705
NlaIV GGNNCC 5 cut(s) 555, 924, 1301, 1589, 1699
NmeAIII GCCGAG 1 cut(s) 371
NmuCI GTSAC 3 cut(s) 41, 590, 1079
NsiI ATGCAT 1 cut(s) 1454
NspI RCATGY 2 cut(s) 750, 1452
NspV TTCGAA 1 cut(s) 304
PaeR7I CTCGAG 1 cut(s) 1086
PagI TCATGA 1 cut(s) 930
PctI GAATGC 1 cut(s) 879
PdmI GAANNNNTTC 1 cut(s) 1320
PfeI GAWTC 3 cut(s) 840, 1558, 1653
PflFI GACNNNGTC 2 cut(s) 799, 1292
PflMI CCANNNNNTGG 1 cut(s) 252
PinAI ACCGGT 2 cut(s) 1635, 1661
PkrI GCNGC 5 cut(s) 402, 1279, 1568, 1578, 1592
PleI GAGTC 1 cut(s) 808
PpsI GAGTC 1 cut(s) 808
PshBI ATTAAT 1 cut(s) 614
PsiI TTATAA 1 cut(s) 740
PspN4I GGNNCC 5 cut(s) 555, 924, 1301, 1589, 1699
PspPI GGNCC 1 cut(s) 1633
PspXI VCTCGAGB 1 cut(s) 1086
PstI CTGCAG 1 cut(s) 1282
PsuI RGATCY 2 cut(s) 768, 922
PsyI GACNNNGTC 2 cut(s) 799, 1292
RsaI GTAC 7 cut(s) 19, 25, 340, 603, 1042, 1073, 1178
RsaNI GTAC 7 cut(s) 18, 24, 339, 602, 1041, 1072, 1177
RseI CAYNNNNRTG 1 cut(s) 547
SalI GTCGAC 1 cut(s) 201
SaqAI TTAA 7 cut(s) 348, 614, 678, 710, 828, 1020, 1146
SatI GCNGC 5 cut(s) 401, 1278, 1567, 1577, 1591
Sau96I GGNCC 1 cut(s) 1633
ScaI AGTACT 2 cut(s) 19, 25
SchI GAGTC 1 cut(s) 809
ScrFI CCNGG 1 cut(s) 58
SduI GDGCHC 1 cut(s) 1352
SfaNI GCATC 3 cut(s) 95, 683, 1022
SfcI CTRYAG 1 cut(s) 1278
Sfr274I CTCGAG 1 cut(s) 1086
SfuI TTCGAA 1 cut(s) 304
SinI GGWCC 1 cut(s) 1633
SlaI CTCGAG 1 cut(s) 1086
SmiMI CAYNNNNRTG 1 cut(s) 547
SmlI CTYRAG 4 cut(s) 1086, 1478, 1504, 1553
SmoI CTYRAG 4 cut(s) 1086, 1478, 1504, 1553
SpeI ACTAGT 2 cut(s) 20, 1139
SsiI CCGC 9 cut(s) 289, 357, 401, 1102, 1134, 1566, 1591, 1621, 1680
SspI AATATT 3 cut(s) 154, 735, 1125
SspMI CTAG 6 cut(s) 21, 270, 482, 1140, 1232, 1668
StyD4I CCNGG 1 cut(s) 56
StyI CCWWGG 2 cut(s) 1129, 1354
TaaI ACNGT 3 cut(s) 47, 1079, 1612
TaiI ACGT 5 cut(s) 183, 517, 597, 1521, 1531
TaqI TCGA 8 cut(s) 140, 162, 202, 304, 1030, 1087, 1525, 1626
TatI WGTACW 4 cut(s) 17, 23, 1071, 1176
TauI GCSGC 3 cut(s) 403, 1569, 1593
TfiI GAWTC 3 cut(s) 840, 1558, 1653
Tru1I TTAA 7 cut(s) 348, 614, 678, 710, 828, 1020, 1146
Tru9I TTAA 7 cut(s) 348, 614, 678, 710, 828, 1020, 1146
TscAI CASTG 3 cut(s) 126, 236, 1084
TseFI GTSAC 3 cut(s) 41, 590, 1079
TseI GCWGC 2 cut(s) 1277, 1576
Tsp45I GTSAC 3 cut(s) 41, 590, 1079
TspGWI ACGGA 2 cut(s) 915, 1299
TspRI CASTG 3 cut(s) 126, 236, 1084
Tth111I GACNNNGTC 2 cut(s) 799, 1292
Van91I CCANNNNNTGG 1 cut(s) 252
VpaK11BI GGWCC 1 cut(s) 1633
VspI ATTAAT 1 cut(s) 614
XapI RAATTY 5 cut(s) 192, 365, 1222, 1459, 1472
XceI RCATGY 2 cut(s) 750, 1452
XhoI CTCGAG 1 cut(s) 1086
XmiI GTMKAC 1 cut(s) 202
XmnI GAANNNNTTC 1 cut(s) 1320
XspI CTAG 6 cut(s) 21, 270, 482, 1140, 1232, 1668
ZraI GACGTC 1 cut(s) 1519
ZrmI AGTACT 2 cut(s) 19, 25
Zsp2I ATGCAT 1 cut(s) 1454
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.