FvH4_2g38071

Protein FAR1-RELATED SEQUENCE 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000325
Physical Location & Seq
Forward (+)
27591536 .. 27594419
2884 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g38071.t1

Sequence Viewer

Length: 2640 bp
ATGGAACGTGAAATTCCTATGATATCGAACTCAAACAGCTTATCAACACCGGATGTGGAAGGTACAGGTAGTGGTGATTGTCAAATATCTAGCACATCAGATTTTGAAAATGGTACAGACTTGAATGGTTTCATAGAAGTTGAAAGCAATGAAGAAGAGTCAGAAGAAGACACAAGACCTAGTGAAAAGGCTGATTCAATCCATTCCAGAATGTGTCAAGAACTGATTCCCGTAGTTAGTATGGAGTTTGCAACAGAAGATGATGCATTGGCCTTTTACAATCGTTATGCATATAGATTTGGTTTCGGTACTAGATTAAGTATATCACATACATCTTCCAGTGGCTTACTGAGGGATAGACTTTTTGTTTGCTCGGCTGAAGGTAAACGTGGAAAAGACAAGCGAAATCTGTATGTCAAATCTCATCGTGCTGAGACCAGATTTGGTTGTAGAGCAAGGATGAAAATTAAGTATGATCTGAAGTCTGGAAAGTATACTGTTGTGGAATTTTTTGCTGATCATACTCATGTGACTTCAACTCCTAGCAAGACCCATCGTTTTAGGTCTCATAGGAAAATCTCTATTGCTCAAAATGTTCAAGCTGATATGGCTGAAGCTTCAGGACTCAATCCGAAAGAAACTCTTGAGCTATTGAGTCGACAAGCAGGTGGACGTGAGCATTTGGGATTTATTCCAGAAGATTATAGGAATTATTTACGTTCAAAGCGAACAAGAGAAATGAAGTGTGGGGATACCGGTGGTGTTCTGGAATATCTACAAAGAATGCAATTGAATAATCCTAGTTTTACTTATGCTATACAAGTTGATGCGAATGAGTTGATAACCAATATCTTCTGGGCTGATGCAAAGATGAAGGTAGACTATGATTACTTTGGTGATGTAGTATGTTTTGATACCACCTACAGGAAAAACAAAGAAGGAAGGCCATTTGCGATGTTTGTTGGAGTGAATAATCATAAGCAAACACTTATATTTGGTGCTGCATTGTTATATGATGAGACTGCTGAAACTTTCATGTGGTTGTTTGATACCTTTGCAAATACAATGTCTGGGAAGAAACCAAAGAGCATATTGACAGACCAAGATGCTGCAATGGCTAAAGCCTTAGCTTCCCAATGGCCAGAAACACACCATCGACTATGCATTTGGCACATATATCAAAACGCAGCTAAGCATCTTAAAAGTGTCTTTGAGAAGTTTAATGATTTTGCTGAAGACTTTAGCAGTATCATATATGATTATGAAGATGTTGAAGACTTCTTAATTGCTTGGAAGAAGATGCTTGAAAAGTACAATCTTCAAGAAAATACATGGTTAGGCCGGCTATTTGATTTGAAGGAGAAATGGGCTTTAGTTTATGGGCGAGAAACATTCTGTGCAGATATTACCACTACCCAACGCAGCGAAAGCATGAATAATGTTGTTAAAAAGTATGTGAGTTACAAGTATGATTTGCTGCGATTTTTTCGTCACTTTCAGAGATTGGTTGATGATCGTCGTTATAATGAGTTAGTAGCTGATTTCAAAGCAAGTCAGACCACCCCTGCATTGTCATTCCCAGTGAAAATATTAAGGAAGGCAACAAAGGTGTACACACCAGCAGTGTTTAAATGGTTCCAAGTTGAGTTATGTAAAGCTCATGATTGCACCTTGAGGTTATTCAGTGAAATTGGAACAATGCACATATATGAAGTTACCGCTCATGGAAAGCGTTTCCACCATATTGTAACATATGACTCAGCCGATAATACTATCTCATGCAGCTGCAAGAAGTTTGAGTTTTCTGGAATTTTGTGCTCACATGCTTTGAAGGTTCTGTCGACAAATAATGTGAAGACCATTCCTAGCCAATACATCTCAAAGAGATGGACAAAGGATATTAGAGATCAAATGCCAAAGGTGTCATGTCCAAATGCGAATGAAGATGACTCAAATGCAAAAATAGCAAGTCGTTACAGAGAATTGGCTCGATTACATACTGAACTTGCAACAGTTGCTGCTGAATCTGATGAAGCTTATGAAATTACTGTGGTGGCCCTTCACAAGACATTAGTTGATGTTAAGGCATCTTTAAAGAAGAAGACCAGTCAAGAAGCACCAAAAGCTACCTCACCGATCAACAATAGTGCACTTGAGGTTATTACTAATGATATTGATGATCATAGGGTGAGAGGAATCAAGGTTAAAGAAAGAATTGTTCGGAAGGAGGATTCTATAAGACCAAAGAATGCTTTGGAAAAGCTCTTAGGAAGTAAAAGGCATAGGAAAGAAGTAAATACTTCACCCAGACACCAGAAGGAACCAGAATTAAATCATACCAATGAGAACTCCACATGTGTTCCTACTACACTAGTTGATTCCACAAGTGTTCATGCTTCACAAAATTTAGTGAATGAACAGGAGGTCAATGTTACAACGTCTGGTATGGACATATGCATTAAAGATAGAGTTTTACCTCAACAATTACATTTTCTTCAGCATGTGCATCAGAATCCTCAATCTACCATGCATGCTACAATGGAGCAGTACATGAAGCATAATCATGGAGCTCAATATTCAGAGGTGACATTCTTTAGCTTTGGTGTTGTCAACTTGCTTTCTGAAGCTAACTATGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

880

Amino Acids

100.8

Weight (kDa)

7.61

Isoelectric Point (pI)

36.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 92 - 177 5.3e-18 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 270 - 383 1.7e-13 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 301 - 395 1.1e-30 MULE transposase domain
SWIM PF04434 588 - 615 1.9e-08 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000325)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g24391 FvH4_2g38071 FvH4_3g07131 FvH4_3g22481 FvH4_4g15809 FvH4_5g37230 FvH4_7g25201 FvH4_7g29092 FvH4_7g29093
malus_domestica MD01G1197600.v1.1 MD17G1186900.v1.1
prunus_persica Prupe.1G227400_v2.0.a1 Prupe.2G291000_v2.0.a1 Prupe.4G268600_v2.0.a1 Prupe.5G094100_v2.0.a1
pyrus_communis pycom01g20780 pycom17g19620
rosa_chinensis RchiOBHm_Chr1g0376821 RchiOBHm_Chr5g0061941 RchiOBHm_Chr5g0078991 RchiOBHm_Chr6g0276821 RchiOBHm_Chr7g0191321
rosa_laevigata RLG00000007883 RLG00000008804 RLG00000010632 RLG00000026567 RLG00000035244 RLG00000036018 RLG00000036909
rosa_multiflora Rmu_sc0001036.1_g000026 Rmu_sc0001556.1_g000021 Rmu_sc0001974.1_g000022 Rmu_sc0002113.1_g000006 Rmu_sc0002572.1_g000008 Rmu_sc0004808.1_g000011 Rmu_sc0005117.1_g000017 Rmu_sc0005319.1_g000016 Rmu_sc0008432.1_g000005 Rmu_sc0010475.1_g000001 Rmu_sc0015522.1_g000003 Rmu_ssc0000066.1_g000009 Rmu_ssc0000400.1_g000102 Rmu_ssc0000400.1_g000103
rosa_roxburghii Rroxscaffold_1G00071290 Rroxscaffold_2G00141280 Rroxscaffold_3G00233790 Rroxscaffold_4G00297530 Rroxscaffold_5G00368860 Rroxscaffold_5G00386220 Rroxscaffold_7G00159400
rosa_rugosa Rorug01G0146800.1 Rorug01G0162100.1 Rorug01G0162200.1 Rorug01G0398600 Rorug01G0398700 Rorug02G0344200 Rorug02G0344300 Rorug02G0344400 Rorug03G0046200 Rorug03G0153200 Rorug04G0182500 Rorug04G0182600 Rorug05G0257700 Rorug05G0386400 Rorug05G0386400 Rorug05G0386500 Rorug05G0460900.1 Rorug05G0467000 Rorug07G0110400
rosa_samantha Rh1AG183500 Rh1AG416000 Rh1BG023600 Rh1BG145400 Rh1BG145500 Rh1BG278800 Rh1BG375400 Rh1CG389200 Rh1DG166300 Rh1DG176900 Rh1DG309900 Rh1DG406000 Rh2BG439100 Rh2BG502200 Rh2CG314800 Rh2CG517400 Rh2CG532000 Rh2DG449100 Rh3BG109900 Rh3CG230400 Rh3CG246600 Rh3CG289400 Rh3CG289500 Rh3DG120600 Rh4AG144400 Rh4AG408200 Rh4BG419300 Rh4CG101900 Rh4CG151000 Rh4CG226900 Rh4DG235400 Rh5AG265900 Rh5AG375200 Rh5CG559600 Rh5DG218200 Rh6AG074500 Rh6BG291800 Rh6CG292800 Rh6DG284900
rosa_wichuraiana Rw0G013240 Rw1G036490 Rw5G024920 Rw5G030730 Rw5G033710 Rw6G033840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1524
AarI CACCTGC 1 cut(s) 656
Acc36I ACCTGC 1 cut(s) 656
AccBSI CCGCTC 1 cut(s) 1721
AccI GTMKAC 4 cut(s) 494, 658, 879, 1841
AciI CCGC 1 cut(s) 1719
AcoI YGGCCR 1 cut(s) 1139
AcsI RAATTY 4 cut(s) 12, 506, 1809, 2404
AcuI CTGAAG 6 cut(s) 399, 500, 603, 633, 1254, 2480
AfaI GTAC 6 cut(s) 64, 115, 310, 1313, 1613, 2549
AfiI CCNNNNNNNGG 1 cut(s) 924
AflIII ACRYGT 1 cut(s) 2354
AgeI ACCGGT 1 cut(s) 755
AhlI ACTAGT 1 cut(s) 2371
AjiI CACGTC 1 cut(s) 674
Alw21I GWGCWC 3 cut(s) 1820, 2152, 2572
Alw26I GTCTC 3 cut(s) 428, 570, 1013
Alw44I GTGCAC 1 cut(s) 2148
AlwNI CAGNNNCTG 1 cut(s) 2018
AoxI GGCC 5 cut(s) 270, 944, 1139, 1339, 2055
ApaLI GTGCAC 1 cut(s) 2148
ApeKI GCWGC 8 cut(s) 1001, 1109, 1187, 1422, 1477, 1782, 1785, 2018
ApoI RAATTY 4 cut(s) 12, 506, 1809, 2404
ArsI GACNNNNNNTTYG 6 cut(s) 351, 383, 1052, 1084, 1149, 1181
AsiGI ACCGGT 1 cut(s) 755
Asp700I GAANNNNTTC 2 cut(s) 128, 225
AspS9I GGNCC 1 cut(s) 2056
AsuHPI GGTGA 6 cut(s) 86, 908, 2124, 2200, 2295, 2596
BaeGI GKGCMC 1 cut(s) 2152
BalI TGGCCA 1 cut(s) 1141
BanII GRGCYC 1 cut(s) 2572
BbsI GAAGAC 5 cut(s) 174, 1242, 1281, 1862, 2108
Bbv12I GWGCWC 3 cut(s) 1820, 2152, 2572
BbvI GCAGC 8 cut(s) 988, 1096, 1199, 1434, 1464, 1772, 1794, 2005
BccI CCATC 3 cut(s) 561, 1161, 1881
BciVI GTATCC 1 cut(s) 745
BclI TGATCA 2 cut(s) 517, 2179
BcoDI GTCTC 3 cut(s) 428, 570, 1013
BcuI ACTAGT 1 cut(s) 2371
BfaI CTAG 7 cut(s) 90, 180, 312, 543, 801, 1866, 2372
BfmI CTRYAG 1 cut(s) 922
BfuAI ACCTGC 1 cut(s) 656
BfuI GTATCC 1 cut(s) 745
BisI GCNGC 8 cut(s) 1002, 1110, 1188, 1423, 1478, 1783, 1786, 2019
BlpI GCTNAGC 1 cut(s) 1191
BlsI GCNGC 8 cut(s) 1003, 1111, 1189, 1424, 1479, 1784, 1787, 2020
BmgBI CACGTC 1 cut(s) 674
BmgT120I GGNCC 1 cut(s) 2056
BmiI GGNNCC 2 cut(s) 1637, 2322
BmrI ACTGGG 1 cut(s) 1574
BmsI GCATC 8 cut(s) 253, 817, 853, 1096, 1204, 1290, 2096, 2515
BmuI ACTGGG 1 cut(s) 1574
BpiI GAAGAC 5 cut(s) 174, 1242, 1281, 1862, 2108
Bpu10I CCTNAGC 1 cut(s) 1126
Bpu1102I GCTNAGC 1 cut(s) 1191
BpuEI CTTGAG 3 cut(s) 665, 1693, 2174
BsaI GGTCTC 2 cut(s) 428, 570
BsaWI WCCGGW 2 cut(s) 49, 755
BsaXI ACNNNNNCTCC 2 cut(s) 523, 553
Bsc4I CCNNNNNNNGG 1 cut(s) 924
Bse118I RCCGGY 2 cut(s) 755, 1341
Bse1I ACTGG 3 cut(s) 339, 1580, 2106
Bse3DI GCAATG 2 cut(s) 154, 1119
BseGI GGATG 2 cut(s) 58, 465
BseLI CCNNNNNNNGG 1 cut(s) 924
BseMI GCAATG 2 cut(s) 154, 1119
BseMII CTCAG 3 cut(s) 341, 423, 1773
BseNI ACTGG 3 cut(s) 339, 1580, 2106
BseSI GKGCMC 1 cut(s) 2152
BseXI GCAGC 8 cut(s) 988, 1096, 1199, 1434, 1464, 1772, 1794, 2005
BsgI GTGCAG 1 cut(s) 1419
BshFI GGCC 5 cut(s) 272, 946, 1141, 1341, 2057
BshTI ACCGGT 1 cut(s) 755
BsiHKAI GWGCWC 3 cut(s) 1820, 2152, 2572
BsiSI CCGG 3 cut(s) 50, 756, 1342
BslI CCNNNNNNNGG 1 cut(s) 924
BsmAI GTCTC 3 cut(s) 428, 570, 1013
BsmI GAATGC 2 cut(s) 789, 2254
BsnI GGCC 5 cut(s) 272, 946, 1141, 1341, 2057
Bso31I GGTCTC 2 cut(s) 428, 570
Bsp1286I GDGCHC 3 cut(s) 1820, 2152, 2572
Bsp1407I TGTACA 1 cut(s) 1611
Bsp143I GATC 6 cut(s) 475, 517, 1513, 1906, 2136, 2179
Bsp1720I GCTNAGC 1 cut(s) 1191
BspACI CCGC 1 cut(s) 1719
BspANI GGCC 5 cut(s) 272, 946, 1141, 1341, 2057
BspCNI CTCAG 3 cut(s) 342, 424, 1772
BspHI TCATGA 1 cut(s) 1660
BspLI GGNNCC 2 cut(s) 1637, 2322
BspMI ACCTGC 1 cut(s) 656
BspTNI GGTCTC 2 cut(s) 428, 570
BsrBI CCGCTC 1 cut(s) 1721
BsrDI GCAATG 2 cut(s) 154, 1119
BsrFI RCCGGY 2 cut(s) 755, 1341
BsrGI TGTACA 1 cut(s) 1611
BsrI ACTGG 3 cut(s) 339, 1580, 2106
BssAI RCCGGY 2 cut(s) 755, 1341
BssMI GATC 6 cut(s) 475, 517, 1513, 1906, 2136, 2179
BssNAI GTATAC 1 cut(s) 495
Bst1107I GTATAC 1 cut(s) 495
Bst4CI ACNGT 3 cut(s) 499, 2014, 2050
Bst6I CTCTTC 1 cut(s) 150
BstAPI GCANNNNNTGC 1 cut(s) 2015
BstAUI TGTACA 1 cut(s) 1611
BstC8I GCNNGC 2 cut(s) 1343, 2532
BstDEI CTNAG 6 cut(s) 350, 432, 1126, 1191, 1759, 2266
BstF5I GGATG 2 cut(s) 58, 465
BstKTI GATC 6 cut(s) 478, 520, 1516, 1909, 2139, 2182
BstMAI GTCTC 3 cut(s) 428, 570, 1013
BstMBI GATC 6 cut(s) 475, 517, 1513, 1906, 2136, 2179
BstMWI GCNNNNNNNGC 7 cut(s) 608, 1115, 1428, 1964, 2015, 2123, 2633
BstNSI RCATGY 4 cut(s) 1826, 2358, 2504, 2534
BstSFI CTRYAG 1 cut(s) 922
BstSLI GKGCMC 1 cut(s) 2152
BstV1I GCAGC 8 cut(s) 988, 1096, 1199, 1434, 1464, 1772, 1794, 2005
BstV2I GAAGAC 5 cut(s) 174, 1242, 1281, 1862, 2108
BstZ17I GTATAC 1 cut(s) 495
BsuI GTATCC 1 cut(s) 745
BsuRI GGCC 5 cut(s) 272, 946, 1141, 1341, 2057
BtgZI GCGATG 1 cut(s) 968
BtrI CACGTC 1 cut(s) 674
BtsCI GGATG 2 cut(s) 58, 465
BtsI GCAGTG 1 cut(s) 1629
BtsIMutI CAGTG 4 cut(s) 346, 1587, 1629, 1690
BveI ACCTGC 1 cut(s) 656
Cac8I GCNNGC 2 cut(s) 1343, 2532
CaiI CAGNNNCTG 1 cut(s) 2018
CciI TCATGA 1 cut(s) 1660
Cfr10I RCCGGY 2 cut(s) 755, 1341
Cfr13I GGNCC 1 cut(s) 2056
Csp6I GTAC 6 cut(s) 63, 114, 309, 1312, 1612, 2548
CspAI ACCGGT 1 cut(s) 755
CviQI GTAC 6 cut(s) 63, 114, 309, 1312, 1612, 2548
DdeI CTNAG 6 cut(s) 350, 432, 1126, 1191, 1759, 2266
DpnI GATC 6 cut(s) 477, 519, 1515, 1908, 2138, 2181
DpnII GATC 6 cut(s) 475, 517, 1513, 1906, 2136, 2179
DraI TTTAAA 2 cut(s) 1630, 2094
EaeI YGGCCR 1 cut(s) 1139
Eam1104I CTCTTC 1 cut(s) 150
EarI CTCTTC 1 cut(s) 150
Ecl136II GAGCTC 1 cut(s) 2570
Eco24I GRGCYC 1 cut(s) 2572
Eco31I GGTCTC 2 cut(s) 428, 570
Eco32I GATATC 1 cut(s) 24
Eco53kI GAGCTC 1 cut(s) 2570
Eco57I CTGAAG 6 cut(s) 399, 500, 603, 633, 1254, 2480
EcoICRI GAGCTC 1 cut(s) 2570
EcoRV GATATC 1 cut(s) 24
EcoT22I ATGCAT 6 cut(s) 268, 292, 1166, 2459, 2532, 2638
EcoT38I GRGCYC 1 cut(s) 2572
FalI AAGNNNNNCTT 2 cut(s) 627, 659
FauNDI CATATG 2 cut(s) 1753, 2453
FbaI TGATCA 2 cut(s) 517, 2179
FblI GTMKAC 4 cut(s) 494, 658, 879, 1841
Fnu4HI GCNGC 8 cut(s) 1002, 1110, 1188, 1423, 1478, 1783, 1786, 2019
FokI GGATG 2 cut(s) 65, 472
FriOI GRGCYC 1 cut(s) 2572
Fsp4HI GCNGC 8 cut(s) 1002, 1110, 1188, 1423, 1478, 1783, 1786, 2019
FspBI CTAG 7 cut(s) 90, 180, 312, 543, 801, 1866, 2372
GluI GCNGC 8 cut(s) 1002, 1110, 1188, 1423, 1478, 1783, 1786, 2019
HaeIII GGCC 5 cut(s) 272, 946, 1141, 1341, 2057
HapII CCGG 3 cut(s) 50, 756, 1342
HincII GTYRAC 3 cut(s) 659, 1842, 2611
HindII GTYRAC 3 cut(s) 659, 1842, 2611
HindIII AAGCTT 2 cut(s) 615, 2034
HpaII CCGG 3 cut(s) 50, 756, 1342
HphI GGTGA 6 cut(s) 86, 908, 2124, 2200, 2295, 2596
Hpy99I CGWCG 1 cut(s) 1521
HpyCH4III ACNGT 3 cut(s) 499, 2014, 2050
HpyCH4IV ACGT 5 cut(s) 7, 388, 673, 718, 2438
HpyF10VI GCNNNNNNNGC 7 cut(s) 608, 1115, 1428, 1964, 2015, 2123, 2633
HpyF3I CTNAG 6 cut(s) 350, 432, 1126, 1191, 1759, 2266
HpySE526I ACGT 5 cut(s) 7, 388, 673, 718, 2438
KroI GCCGGC 1 cut(s) 1341
KroNI GCCGGC 1 cut(s) 1343
Ksp22I TGATCA 2 cut(s) 517, 2179
Kzo9I GATC 6 cut(s) 475, 517, 1513, 1906, 2136, 2179
LmnI GCTCC 2 cut(s) 2542, 2567
Lsp1109I GCAGC 8 cut(s) 988, 1096, 1199, 1434, 1464, 1772, 1794, 2005
LweI GCATC 8 cut(s) 253, 817, 853, 1096, 1204, 1290, 2096, 2515
MaeI CTAG 7 cut(s) 90, 180, 312, 543, 801, 1866, 2372
MaeII ACGT 5 cut(s) 7, 388, 673, 718, 2438
MaeIII GTNAC 8 cut(s) 529, 1460, 1490, 1714, 1747, 1973, 2431, 2584
MalI GATC 6 cut(s) 477, 519, 1515, 1908, 2138, 2181
MbiI CCGCTC 1 cut(s) 1721
MboI GATC 6 cut(s) 475, 517, 1513, 1906, 2136, 2179
MfeI CAATTG 1 cut(s) 788
MhlI GDGCHC 3 cut(s) 1820, 2152, 2572
MlsI TGGCCA 1 cut(s) 1141
MluNI TGGCCA 1 cut(s) 1141
MlyI GAGTC 5 cut(s) 167, 618, 664, 1751, 1943
MmeI TCCRAC 1 cut(s) 943
Mox20I TGGCCA 1 cut(s) 1141
Mph1103I ATGCAT 6 cut(s) 268, 292, 1166, 2459, 2532, 2638
MroNI GCCGGC 1 cut(s) 1341
MroXI GAANNNNTTC 2 cut(s) 128, 225
MscI TGGCCA 1 cut(s) 1141
MslI CAYNNNNRTG 4 cut(s) 525, 1707, 2340, 2562
Msp20I TGGCCA 1 cut(s) 1141
MspA1I CMGCKG 1 cut(s) 1785
MspI CCGG 3 cut(s) 50, 756, 1342
MunI CAATTG 1 cut(s) 788
Mva1269I GAATGC 2 cut(s) 789, 2254
MwoI GCNNNNNNNGC 7 cut(s) 608, 1115, 1428, 1964, 2015, 2123, 2633
NaeI GCCGGC 1 cut(s) 1343
NdeI CATATG 2 cut(s) 1753, 2453
NdeII GATC 6 cut(s) 475, 517, 1513, 1906, 2136, 2179
NgoMIV GCCGGC 1 cut(s) 1341
NlaIV GGNNCC 2 cut(s) 1637, 2322
NmeAIII GCCGAG 1 cut(s) 353
NmuCI GTSAC 3 cut(s) 529, 1490, 2584
NsiI ATGCAT 6 cut(s) 268, 292, 1166, 2459, 2532, 2638
NspI RCATGY 4 cut(s) 1826, 2358, 2504, 2534
PaeI GCATGC 1 cut(s) 2534
PagI TCATGA 1 cut(s) 1660
PaqCI CACCTGC 1 cut(s) 656
PciI ACATGT 1 cut(s) 2354
PcsI WCGNNNNNNNCGW 1 cut(s) 724
PctI GAATGC 2 cut(s) 789, 2254
PdiI GCCGGC 1 cut(s) 1343
PdmI GAANNNNTTC 2 cut(s) 128, 225
PfeI GAWTC 7 cut(s) 194, 226, 2024, 2196, 2231, 2378, 2512
PinAI ACCGGT 1 cut(s) 755
PkrI GCNGC 8 cut(s) 1003, 1111, 1189, 1424, 1479, 1784, 1787, 2020
PleI GAGTC 5 cut(s) 166, 618, 663, 1751, 1943
PpsI GAGTC 5 cut(s) 166, 618, 663, 1751, 1943
PscI ACATGT 1 cut(s) 2354
PsiI TTATAA 1 cut(s) 1524
Psp124BI GAGCTC 1 cut(s) 2572
PspN4I GGNNCC 2 cut(s) 1637, 2322
PspPI GGNCC 1 cut(s) 2056
PstNI CAGNNNCTG 1 cut(s) 2018
PvuII CAGCTG 1 cut(s) 1785
RsaI GTAC 6 cut(s) 64, 115, 310, 1313, 1613, 2549
RsaNI GTAC 6 cut(s) 63, 114, 309, 1312, 1612, 2548
RseI CAYNNNNRTG 4 cut(s) 525, 1707, 2340, 2562
SacI GAGCTC 1 cut(s) 2572
SalI GTCGAC 2 cut(s) 657, 1840
SatI GCNGC 8 cut(s) 1002, 1110, 1188, 1423, 1478, 1783, 1786, 2019
Sau3AI GATC 6 cut(s) 475, 517, 1513, 1906, 2136, 2179
Sau96I GGNCC 1 cut(s) 2056
SchI GAGTC 5 cut(s) 167, 618, 664, 1751, 1943
SduI GDGCHC 3 cut(s) 1820, 2152, 2572
SfaNI GCATC 8 cut(s) 253, 817, 853, 1096, 1204, 1290, 2096, 2515
SfcI CTRYAG 1 cut(s) 922
SmiMI CAYNNNNRTG 4 cut(s) 525, 1707, 2340, 2562
SmlI CTYRAG 3 cut(s) 644, 1672, 2153
SmoI CTYRAG 3 cut(s) 644, 1672, 2153
SpeI ACTAGT 1 cut(s) 2371
SphI GCATGC 1 cut(s) 2534
SsiI CCGC 1 cut(s) 1719
SspI AATATT 2 cut(s) 1590, 2576
SspMI CTAG 7 cut(s) 90, 180, 312, 543, 801, 1866, 2372
SstI GAGCTC 1 cut(s) 2572
TaaI ACNGT 3 cut(s) 499, 2014, 2050
TaiI ACGT 5 cut(s) 10, 391, 676, 721, 2441
TaqI TCGA 5 cut(s) 26, 658, 1156, 1841, 1990
TatI WGTACW 3 cut(s) 1311, 1611, 2547
TfiI GAWTC 7 cut(s) 194, 226, 2024, 2196, 2231, 2378, 2512
TscAI CASTG 4 cut(s) 346, 1587, 1629, 1690
TseFI GTSAC 3 cut(s) 529, 1490, 2584
TseI GCWGC 8 cut(s) 1001, 1109, 1187, 1422, 1477, 1782, 1785, 2018
Tsp45I GTSAC 3 cut(s) 529, 1490, 2584
TspRI CASTG 4 cut(s) 346, 1587, 1629, 1690
VneI GTGCAC 1 cut(s) 2148
XapI RAATTY 4 cut(s) 12, 506, 1809, 2404
XceI RCATGY 4 cut(s) 1826, 2358, 2504, 2534
XmiI GTMKAC 4 cut(s) 494, 658, 879, 1841
XmnI GAANNNNTTC 2 cut(s) 128, 225
XspI CTAG 7 cut(s) 90, 180, 312, 543, 801, 1866, 2372
Zsp2I ATGCAT 6 cut(s) 268, 292, 1166, 2459, 2532, 2638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.