RchiOBHm_Chr1g0376821

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000325
Physical Location & Seq
Forward (+)
64017260 .. 64021582
4323 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60043

Sequence Viewer

Length: 2574 bp
ATGGAAAGGGGGGAAGGCGATTTTATTAGTATTGTTGAGGAAAGCATAGATTTTGGAGTTGAAACAAACAACAGTTTGGACTTGAATGTAGAGCAGGATTGTCACAACCCGAAAATTGTTCATGGCAATGGCACTGTGTCCAATGTATCATCTACAAATGACCACAGTGTCGATGCAGTTGTGAAAGTTGGTACAGAGTTTGAGTCTGATGAGCATGCTTACAGGTGTTATAATAAGTATGCTAAGTTGGTGGGTTTCAATGTTCGGAAAGATTGGGTGAATAGGAGTAAGGTACATGGTCAGGTCGTGTCTAGGAAGTTCACTTGTTCTAAAGAGGGTTATCGGCGGAGGGATAAAAGGGATGTTACTGTAAAGAAACATCGAAAGGAAACTAGAACTGGTTGCCTGGCGCATATGGTCATTACTCGTCAACCTGATGGTAAATATCGGGTTTCACATATTGAAGAACAACACAATCATGACAATGTAAACGCAAGTACGGCTCAAGTGTTACCACTGCACAGGGAATCCAGTATTTCCCAAGCTGCTGATGCTGAACTGGTAGAAGGTACCAAAGATTTCAGAACACTGTCAAAATTGGCATCTGAATCGATGAATAGACGGTTTAGAGTAAGGGAATCTCTCAATAATGTTTCTATAGGTTATAACAATCATCTTCAATCTGAAAGGACCAGAGATATGAAGAAGGGAGAAGTTGGACGTTTGCTGCATTACTTTCAAAGGCAACATGTTGAAAACCCATCCTTTTTTTATGCATTACAGGTTGATACTGATGATAAAGTTTGTAACATCTTTTGGGCCGATGATAAGATGGTATCAGATTATGATTATTTTGGGGATTTGGTTTGTCTCGACACAATTTGCAGAGCAGACAAGAATTGTCTCCCATTTGTACAGTTTATAGGAGTAAACCATCACAAACAGGTGCTGATCTTTGCTGCCGCACTTTTGTATGATGACACCATGGAATCTTATAAGTGGCTATTTCAAACCTTCTTGGAAGCAATGTCAGGGAAGAAACCAAGGACCATTCTAACTGATCAAGATGCAACAATTGTTGAGGCAATCGATTCAGTCTTACCAGAAACAGACCATTGTATATGCACATGGCAAATGTACGAAAATGCTCTCAAACACATTAGCCCCATGGTAAACGATACCGGGTCTTTTGCCAATGATTTCAAGAGATGTATATACGACCACAAAGATGAAGATGATTTTGTTTCTGCTTGGGGGGATATGCTAGATAAATATGGTCTTCAGCAGAATGACTGGTTAAAATGGATGTTTAGAGCACGAGAGAAATGGGCTGTGGTGAATGGTAGGAATACTATTTTTGTTGACAAAGGCACACATTTGGTCGAAAGTTTATTTAATGATCTGAGAAGTTACCTATACTCTGACACTACTGTGGTTCAATTCTTTAAGCATTTTGAAAGGGTCGTGGATGAGCAACGGTCCAAAGAAATAGAAGCTAGCGATGAAATGAATAGCTGTTTGCCAAGGCTAATGGGGAATGTGGTTATGTTAAAGCATGCAAGTACTGTATACACCTCAAGGGCATTTGAAGTATTTCAGCAAGGATATGAGAAGTGTTTAAATGTTGTTGTCAACCAATGTAGTGAGAATGGGTCATTGTTTGAGTACAGAGCTAAAACATTTGGGAAAACTCAAGAACACAGCGTCATATTCTGTTCCTCTGATGGTACAGTTATATGCAGTTGTAAGAAATTTGAGAGTGTTGGGTTTCTATGTAGCCATGCCCTTAAAGTGCTGGATCACAGGAATATAAAGGTACTCCCCGCCAATTATGTCTTGAAGAGATGGACAAAAGATGCAAGGTTAGGGATTGCAAGACCGAGTGATGTCTCCACCGTCAATGATAACCCTAAGCTTATTGTGGCTAGCCGTTACAAAGATCTTAGCCACAGAATTCTGATGTTGTCTACCAGGGCTTCTGAATCTGGGGAAGCATTTCAATACGCTGTTAGACAACTCGACCAAGTGATGGACGGGGTTGAGAAAATTTTGACATTAAAACCTGAGGATGCTCAAGCTGTCACGTCAAGCAGCACAGGTACAACTACTTCTGATAATGAGCATGCAGAAACTTTTCTTGATGAGAATGCTTTTGAGAATCAGGGTGAGAATGGAGTAGAAGGAGCAAACGAACAAGGGAGTGCTGTCCTCGACAGAGGTGAATTAATGAATGTAAATGGAAACTTCTCTAGCACAAACAGAATTCAGATTTCAGATGCATCCCCGCAAAGTAATCATTCCTACATTTCTTCGGAACCCTTAACCGGAAATCCCATTACACAGGGTTTGTACACTTTTGAAGAGAACCCTGTAGTCAATTGCACGTACGCGCAAGATAATGCCATCTTATTTCGACCTCCAAACATCTTTCCTAACCAACACGATTCACCTTCCCAGTTGCAATTGCTTCAGGAACCTCTTATCAATGGCACATACCAAGAACCCATATCTGAACTGAGGCAGGCAATGGATCTCGATCTCCACCCTCCACATTCACCTTCATTTTTGCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

857

Amino Acids

97.55

Weight (kDa)

5.65

Isoelectric Point (pI)

36.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 77 - 161 7.9e-23 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 257 - 370 2.1e-07 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 289 - 382 3.8e-23 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000325)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g24391 FvH4_2g38071 FvH4_3g07131 FvH4_3g22481 FvH4_4g15809 FvH4_5g37230 FvH4_7g25201 FvH4_7g29092 FvH4_7g29093
malus_domestica MD01G1197600.v1.1 MD17G1186900.v1.1
prunus_persica Prupe.1G227400_v2.0.a1 Prupe.2G291000_v2.0.a1 Prupe.4G268600_v2.0.a1 Prupe.5G094100_v2.0.a1
pyrus_communis pycom01g20780 pycom17g19620
rosa_chinensis RchiOBHm_Chr1g0376821 RchiOBHm_Chr5g0061941 RchiOBHm_Chr5g0078991 RchiOBHm_Chr6g0276821 RchiOBHm_Chr7g0191321
rosa_laevigata RLG00000007883 RLG00000008804 RLG00000010632 RLG00000026567 RLG00000035244 RLG00000036018 RLG00000036909
rosa_multiflora Rmu_sc0001036.1_g000026 Rmu_sc0001556.1_g000021 Rmu_sc0001974.1_g000022 Rmu_sc0002113.1_g000006 Rmu_sc0002572.1_g000008 Rmu_sc0004808.1_g000011 Rmu_sc0005117.1_g000017 Rmu_sc0005319.1_g000016 Rmu_sc0008432.1_g000005 Rmu_sc0010475.1_g000001 Rmu_sc0015522.1_g000003 Rmu_ssc0000066.1_g000009 Rmu_ssc0000400.1_g000102 Rmu_ssc0000400.1_g000103
rosa_roxburghii Rroxscaffold_1G00071290 Rroxscaffold_2G00141280 Rroxscaffold_3G00233790 Rroxscaffold_4G00297530 Rroxscaffold_5G00368860 Rroxscaffold_5G00386220 Rroxscaffold_7G00159400
rosa_rugosa Rorug01G0146800.1 Rorug01G0162100.1 Rorug01G0162200.1 Rorug01G0398600 Rorug01G0398700 Rorug02G0344200 Rorug02G0344300 Rorug02G0344400 Rorug03G0046200 Rorug03G0153200 Rorug04G0182500 Rorug04G0182600 Rorug05G0257700 Rorug05G0386400 Rorug05G0386400 Rorug05G0386500 Rorug05G0460900.1 Rorug05G0467000 Rorug07G0110400
rosa_samantha Rh1AG183500 Rh1AG416000 Rh1BG023600 Rh1BG145400 Rh1BG145500 Rh1BG278800 Rh1BG375400 Rh1CG389200 Rh1DG166300 Rh1DG176900 Rh1DG309900 Rh1DG406000 Rh2BG439100 Rh2BG502200 Rh2CG314800 Rh2CG517400 Rh2CG532000 Rh2DG449100 Rh3BG109900 Rh3CG230400 Rh3CG246600 Rh3CG289400 Rh3CG289500 Rh3DG120600 Rh4AG144400 Rh4AG408200 Rh4BG419300 Rh4CG101900 Rh4CG151000 Rh4CG226900 Rh4DG235400 Rh5AG265900 Rh5AG375200 Rh5CG559600 Rh5DG218200 Rh6AG074500 Rh6BG291800 Rh6CG292800 Rh6DG284900
rosa_wichuraiana Rw0G013240 Rw1G036490 Rw5G024920 Rw5G030730 Rw5G033710 Rw6G033840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 231, 666, 996
AasI GACNNNNNNGTC 1 cut(s) 167
Acc65I GGTACC 1 cut(s) 569
AccB1I GGYRCC 1 cut(s) 569
AccB7I CCANNNNNTGG 1 cut(s) 2029
AccI GTMKAC 2 cut(s) 1569, 1967
AccII CGCG 1 cut(s) 2390
AciI CCGC 4 cut(s) 346, 963, 1824, 2285
AclWI GGATC 2 cut(s) 1806, 2538
AcsI RAATTY 4 cut(s) 1751, 1953, 2046, 2262
AcuI CTGAAG 2 cut(s) 1265, 2453
AfiI CCNNNNNNNGG 2 cut(s) 2029, 2324
AflIII ACRYGT 1 cut(s) 748
AjiI CACGTC 1 cut(s) 2085
AjnI CCWGG 2 cut(s) 405, 1970
AleI CACNNNNGTG 1 cut(s) 1430
AluBI AGCT 6 cut(s) 545, 1496, 1515, 1673, 1915, 2078
AluI AGCT 6 cut(s) 545, 1496, 1515, 1673, 1915, 2078
Alw21I GWGCWC 1 cut(s) 1318
Alw26I GTCTC 3 cut(s) 875, 908, 1894
AlwI GGATC 2 cut(s) 1806, 2538
AlwNI CAGNNNCTG 1 cut(s) 949
AoxI GGCC 1 cut(s) 819
ApeKI GCWGC 4 cut(s) 545, 727, 959, 2091
ApoI RAATTY 4 cut(s) 1751, 1953, 2046, 2262
AseI ATTAAT 1 cut(s) 2225
Asp700I GAANNNNTTC 3 cut(s) 1593, 1995, 2133
Asp718I GGTACC 1 cut(s) 569
AspLEI GCGC 2 cut(s) 412, 2392
AspS9I GGNCC 4 cut(s) 690, 819, 1047, 1479
AsuC2I CCSGG 1 cut(s) 1183
AsuHPI GGTGA 6 cut(s) 289, 1348, 2177, 2231, 2439, 2547
AsuNHI GCTAGC 2 cut(s) 1496, 1925
AvaII GGWCC 3 cut(s) 690, 1047, 1479
AxyI CCTNAGG 1 cut(s) 2064
BanI GGYRCC 1 cut(s) 569
BarI GAAGNNNNNNTAC 2 cut(s) 2092, 2124
BauI CACGAG 1 cut(s) 1317
BbsI GAAGAC 1 cut(s) 1271
Bbv12I GWGCWC 1 cut(s) 1318
BbvI GCAGC 4 cut(s) 532, 714, 946, 2103
BccI CCATC 8 cut(s) 431, 769, 826, 942, 1718, 1839, 2023, 2411
BceAI ACGGC 2 cut(s) 516, 1914
BcgI CGANNNNNNTGC 2 cut(s) 591, 625
BciT130I CCWGG 2 cut(s) 407, 1972
BclI TGATCA 1 cut(s) 1060
BcnI CCSGG 1 cut(s) 1183
BcoDI GTCTC 3 cut(s) 875, 908, 1894
BfaI CTAG 6 cut(s) 312, 393, 1265, 1497, 1926, 2250
BfmI CTRYAG 2 cut(s) 657, 2370
BglII AGATCT 1 cut(s) 1939
BisI GCNGC 5 cut(s) 546, 728, 960, 963, 2092
BlsI GCNGC 5 cut(s) 547, 729, 961, 964, 2093
BmcAI AGTACT 1 cut(s) 1564
Bme1390I CCNGG 3 cut(s) 407, 1183, 1972
Bme18I GGWCC 3 cut(s) 690, 1047, 1479
BmgBI CACGTC 1 cut(s) 2085
BmgT120I GGNCC 4 cut(s) 690, 819, 1047, 1479
BmiI GGNNCC 3 cut(s) 571, 2316, 2475
BmrFI CCNGG 3 cut(s) 407, 1183, 1972
BmrI ACTGGG 1 cut(s) 2449
BmsI GCATC 8 cut(s) 163, 541, 611, 1057, 1846, 2059, 2266, 2288
BmtI GCTAGC 2 cut(s) 1500, 1929
BmuI ACTGGG 1 cut(s) 2449
BpiI GAAGAC 1 cut(s) 1271
Bpu10I CCTNAGC 1 cut(s) 1911
BpuEI CTTGAG 4 cut(s) 489, 1561, 1677, 2058
BpuMI CCSGG 1 cut(s) 1183
Bsa29I ATCGAT 2 cut(s) 611, 1089
BsaAI YACGTR 1 cut(s) 2385
BsaBI GATNNNNATC 1 cut(s) 2535
BsaJI CCNNGG 5 cut(s) 984, 1043, 1167, 1523, 1971
BsaWI WCCGGW 1 cut(s) 2324
Bsc4I CCNNNNNNNGG 2 cut(s) 2029, 2324
Bse1I ACTGG 5 cut(s) 403, 531, 564, 1298, 2455
Bse21I CCTNAGG 1 cut(s) 2064
Bse3DI GCAATG 3 cut(s) 133, 1032, 2532
Bse8I GATNNNNATC 1 cut(s) 2535
BseBI CCWGG 2 cut(s) 407, 1972
BseCI ATCGAT 2 cut(s) 611, 1089
BseDI CCNNGG 5 cut(s) 984, 1043, 1167, 1523, 1971
BseGI GGATG 6 cut(s) 367, 761, 1311, 1474, 2074, 2279
BseJI GATNNNNATC 1 cut(s) 2535
BseLI CCNNNNNNNGG 2 cut(s) 2029, 2324
BseMI GCAATG 3 cut(s) 133, 1032, 2532
BseMII CTCAG 3 cut(s) 1394, 2055, 2507
BseNI ACTGG 5 cut(s) 403, 531, 564, 1298, 2455
BseXI GCAGC 4 cut(s) 532, 714, 946, 2103
BsgI GTGCAG 1 cut(s) 503
Bsh1236I CGCG 1 cut(s) 2390
BshFI GGCC 1 cut(s) 821
BshNI GGYRCC 1 cut(s) 569
BshVI ATCGAT 2 cut(s) 611, 1089
BsiHKAI GWGCWC 1 cut(s) 1318
BsiSI CCGG 2 cut(s) 1182, 2325
BsiWI CGTACG 1 cut(s) 2385
BslI CCNNNNNNNGG 2 cut(s) 2029, 2324
BsmAI GTCTC 3 cut(s) 875, 908, 1894
BsmI GAATGC 1 cut(s) 2152
BsnI GGCC 1 cut(s) 821
Bsp1286I GDGCHC 1 cut(s) 1318
Bsp1407I TGTACA 2 cut(s) 913, 2349
Bsp143I GATC 7 cut(s) 951, 1060, 1399, 1798, 1939, 2530, 2536
Bsp19I CCATGG 2 cut(s) 984, 1167
BspACI CCGC 4 cut(s) 346, 963, 1824, 2285
BspANI GGCC 1 cut(s) 821
BspCNI CTCAG 3 cut(s) 1395, 2056, 2508
BspDI ATCGAT 2 cut(s) 611, 1089
BspFNI CGCG 1 cut(s) 2390
BspHI TCATGA 1 cut(s) 478
BspLI GGNNCC 3 cut(s) 571, 2316, 2475
BspOI GCTAGC 2 cut(s) 1500, 1929
BspPI GGATC 2 cut(s) 1806, 2538
BspT107I GGYRCC 1 cut(s) 569
BsrDI GCAATG 3 cut(s) 133, 1032, 2532
BsrGI TGTACA 2 cut(s) 913, 2349
BsrI ACTGG 5 cut(s) 403, 531, 564, 1298, 2455
BssECI CCNNGG 5 cut(s) 984, 1043, 1167, 1523, 1971
BssMI GATC 7 cut(s) 951, 1060, 1399, 1798, 1939, 2530, 2536
BssNAI GTATAC 1 cut(s) 1570
BssSI CACGAG 1 cut(s) 1317
BssT1I CCWWGG 4 cut(s) 984, 1043, 1167, 1523
Bst1107I GTATAC 1 cut(s) 1570
Bst2BI CACGAG 1 cut(s) 1317
Bst2UI CCWGG 2 cut(s) 407, 1972
Bst6I CTCTTC 2 cut(s) 1835, 2355
BstAUI TGTACA 2 cut(s) 913, 2349
BstBAI YACGTR 1 cut(s) 2385
BstC8I GCNNGC 6 cut(s) 216, 1498, 1557, 1927, 2124, 2523
BstDEI CTNAG 6 cut(s) 243, 1403, 1911, 1943, 2064, 2516
BstDSI CCRYGG 2 cut(s) 984, 1167
BstF5I GGATG 6 cut(s) 367, 761, 1311, 1474, 2074, 2279
BstFNI CGCG 1 cut(s) 2390
BstHHI GCGC 2 cut(s) 412, 2392
BstKTI GATC 7 cut(s) 954, 1063, 1402, 1801, 1942, 2533, 2539
BstMAI GTCTC 3 cut(s) 875, 908, 1894
BstMBI GATC 7 cut(s) 951, 1060, 1399, 1798, 1939, 2530, 2536
BstMWI GCNNNNNNNGC 2 cut(s) 500, 551
BstNI CCWGG 2 cut(s) 407, 1972
BstNSI RCATGY 4 cut(s) 218, 752, 1559, 2126
BstSCI CCNGG 3 cut(s) 405, 1181, 1970
BstSFI CTRYAG 2 cut(s) 657, 2370
BstUI CGCG 1 cut(s) 2390
BstV1I GCAGC 4 cut(s) 532, 714, 946, 2103
BstV2I GAAGAC 1 cut(s) 1271
BstX2I RGATCY 2 cut(s) 1939, 2530
BstYI RGATCY 2 cut(s) 1939, 2530
BstZ17I GTATAC 1 cut(s) 1570
Bsu15I ATCGAT 2 cut(s) 611, 1089
Bsu36I CCTNAGG 1 cut(s) 2064
BsuRI GGCC 1 cut(s) 821
BsuTUI ATCGAT 2 cut(s) 611, 1089
BtgI CCRYGG 2 cut(s) 984, 1167
BtgZI GCGATG 1 cut(s) 1515
BtrI CACGTC 1 cut(s) 2085
BtsCI GGATG 6 cut(s) 367, 761, 1311, 1474, 2074, 2279
BtsI GCAGTG 1 cut(s) 515
BtsIMutI CAGTG 4 cut(s) 132, 172, 515, 587
Cac8I GCNNGC 6 cut(s) 216, 1498, 1557, 1927, 2124, 2523
CaiI CAGNNNCTG 1 cut(s) 949
CciI TCATGA 1 cut(s) 478
CfoI GCGC 2 cut(s) 412, 2392
Cfr13I GGNCC 4 cut(s) 690, 819, 1047, 1479
ClaI ATCGAT 2 cut(s) 611, 1089
CseI GACGC 1 cut(s) 1693
DdeI CTNAG 6 cut(s) 243, 1403, 1911, 1943, 2064, 2516
DpnI GATC 7 cut(s) 953, 1062, 1401, 1800, 1941, 2532, 2538
DpnII GATC 7 cut(s) 951, 1060, 1399, 1798, 1939, 2530, 2536
DraI TTTAAA 1 cut(s) 1620
DrdI GACNNNNNNGTC 1 cut(s) 167
DseDI GACNNNNNNGTC 1 cut(s) 167
Eam1104I CTCTTC 2 cut(s) 1835, 2355
EarI CTCTTC 2 cut(s) 1835, 2355
EciI GGCGGA 1 cut(s) 361
Eco130I CCWWGG 4 cut(s) 984, 1043, 1167, 1523
Eco47I GGWCC 3 cut(s) 690, 1047, 1479
Eco57I CTGAAG 2 cut(s) 1265, 2453
Eco81I CCTNAGG 1 cut(s) 2064
EcoRI GAATTC 2 cut(s) 1953, 2262
EcoRII CCWGG 2 cut(s) 405, 1970
EcoT14I CCWWGG 4 cut(s) 984, 1043, 1167, 1523
EcoT22I ATGCAT 2 cut(s) 778, 2281
ErhI CCWWGG 4 cut(s) 984, 1043, 1167, 1523
FauI CCCGC 2 cut(s) 1831, 2292
FauNDI CATATG 1 cut(s) 414
FbaI TGATCA 1 cut(s) 1060
FblI GTMKAC 2 cut(s) 1569, 1967
Fnu4HI GCNGC 5 cut(s) 546, 728, 960, 963, 2092
FokI GGATG 6 cut(s) 374, 748, 1318, 1481, 2081, 2266
Fsp4HI GCNGC 5 cut(s) 546, 728, 960, 963, 2092
FspBI CTAG 6 cut(s) 312, 393, 1265, 1497, 1926, 2250
GlaI GCGC 2 cut(s) 411, 2391
GluI GCNGC 5 cut(s) 546, 728, 960, 963, 2092
HaeIII GGCC 1 cut(s) 821
HapII CCGG 2 cut(s) 1182, 2325
HgaI GACGC 1 cut(s) 1693
HhaI GCGC 2 cut(s) 412, 2392
Hin6I GCGC 2 cut(s) 410, 2390
HinP1I GCGC 2 cut(s) 410, 2390
HincII GTYRAC 3 cut(s) 431, 1363, 1633
HindII GTYRAC 3 cut(s) 431, 1363, 1633
HindIII AAGCTT 1 cut(s) 1913
HinfI GANTC 9 cut(s) 203, 527, 608, 638, 989, 1091, 1982, 2158, 2444
HpaII CCGG 2 cut(s) 1182, 2325
HphI GGTGA 6 cut(s) 289, 1348, 2177, 2231, 2439, 2547
Hpy188III TCNNGA 9 cut(s) 479, 872, 1064, 1204, 1694, 1837, 2138, 2471, 2534
HpyAV CCTTC 7 cut(s) 8, 560, 700, 1024, 2174, 2460, 2568
HpyCH4IV ACGT 3 cut(s) 721, 2084, 2384
HpyF10VI GCNNNNNNNGC 2 cut(s) 500, 551
HpyF3I CTNAG 6 cut(s) 243, 1403, 1911, 1943, 2064, 2516
HpySE526I ACGT 3 cut(s) 721, 2084, 2384
HspAI GCGC 2 cut(s) 410, 2390
KpnI GGTACC 1 cut(s) 573
Ksp22I TGATCA 1 cut(s) 1060
Kzo9I GATC 7 cut(s) 951, 1060, 1399, 1798, 1939, 2530, 2536
LmnI GCTCC 1 cut(s) 2183
Lsp1109I GCAGC 4 cut(s) 532, 714, 946, 2103
LweI GCATC 8 cut(s) 163, 541, 611, 1057, 1846, 2059, 2266, 2288
MaeI CTAG 6 cut(s) 312, 393, 1265, 1497, 1926, 2250
MaeII ACGT 3 cut(s) 721, 2084, 2384
MaeIII GTNAC 7 cut(s) 101, 364, 510, 806, 1409, 1931, 2080
MalI GATC 7 cut(s) 953, 1062, 1401, 1800, 1941, 2532, 2538
MboI GATC 7 cut(s) 951, 1060, 1399, 1798, 1939, 2530, 2536
MboII GAAGA 9 cut(s) 476, 668, 715, 1048, 1244, 1271, 1852, 2301, 2372
MfeI CAATTG 3 cut(s) 1074, 2377, 2462
MflI RGATCY 2 cut(s) 1939, 2530
MhlI GDGCHC 1 cut(s) 1318
MlyI GAGTC 1 cut(s) 212
MmeI TCCRAC 1 cut(s) 697
Mph1103I ATGCAT 2 cut(s) 778, 2281
MroXI GAANNNNTTC 3 cut(s) 1593, 1995, 2133
MseI TTAA 9 cut(s) 1298, 1395, 1446, 1550, 1619, 1788, 2057, 2225, 2321
MslI CAYNNNNRTG 5 cut(s) 126, 477, 483, 1227, 1430
MspI CCGG 2 cut(s) 1182, 2325
MspR9I CCNGG 3 cut(s) 407, 1183, 1972
MunI CAATTG 3 cut(s) 1074, 2377, 2462
Mva1269I GAATGC 1 cut(s) 2152
MvaI CCWGG 2 cut(s) 407, 1972
MvnI CGCG 1 cut(s) 2390
MwoI GCNNNNNNNGC 2 cut(s) 500, 551
NciI CCSGG 1 cut(s) 1183
NcoI CCATGG 2 cut(s) 984, 1167
NdeI CATATG 1 cut(s) 414
NdeII GATC 7 cut(s) 951, 1060, 1399, 1798, 1939, 2530, 2536
NheI GCTAGC 2 cut(s) 1496, 1925
NlaIV GGNNCC 3 cut(s) 571, 2316, 2475
NmuCI GTSAC 2 cut(s) 101, 2080
NsiI ATGCAT 2 cut(s) 778, 2281
NspI RCATGY 4 cut(s) 218, 752, 1559, 2126
OliI CACNNNNGTG 1 cut(s) 1430
PaeI GCATGC 3 cut(s) 218, 1559, 2126
PagI TCATGA 1 cut(s) 478
PciI ACATGT 1 cut(s) 748
PctI GAATGC 1 cut(s) 2152
PdmI GAANNNNTTC 3 cut(s) 1593, 1995, 2133
PfeI GAWTC 8 cut(s) 527, 608, 638, 989, 1091, 1982, 2158, 2444
Pfl23II CGTACG 1 cut(s) 2385
PflMI CCANNNNNTGG 1 cut(s) 2029
PkrI GCNGC 5 cut(s) 547, 729, 961, 964, 2093
PleI GAGTC 1 cut(s) 211
PpsI GAGTC 1 cut(s) 211
Ppu21I YACGTR 1 cut(s) 2385
PscI ACATGT 1 cut(s) 748
PshBI ATTAAT 1 cut(s) 2225
PsiI TTATAA 3 cut(s) 231, 666, 996
Psp6I CCWGG 2 cut(s) 405, 1970
PspGI CCWGG 2 cut(s) 405, 1970
PspLI CGTACG 1 cut(s) 2385
PspN4I GGNNCC 3 cut(s) 571, 2316, 2475
PspPI GGNCC 4 cut(s) 690, 819, 1047, 1479
PstNI CAGNNNCTG 1 cut(s) 949
PsuI RGATCY 2 cut(s) 1939, 2530
RseI CAYNNNNRTG 5 cut(s) 126, 477, 483, 1227, 1430
SaqAI TTAA 9 cut(s) 1298, 1395, 1446, 1550, 1619, 1788, 2057, 2225, 2321
SatI GCNGC 5 cut(s) 546, 728, 960, 963, 2092
Sau3AI GATC 7 cut(s) 951, 1060, 1399, 1798, 1939, 2530, 2536
Sau96I GGNCC 4 cut(s) 690, 819, 1047, 1479
ScaI AGTACT 1 cut(s) 1564
SchI GAGTC 1 cut(s) 212
ScrFI CCNGG 3 cut(s) 407, 1183, 1972
SduI GDGCHC 1 cut(s) 1318
SfaNI GCATC 8 cut(s) 163, 541, 611, 1057, 1846, 2059, 2266, 2288
SfcI CTRYAG 2 cut(s) 657, 2370
SinI GGWCC 3 cut(s) 690, 1047, 1479
SmiMI CAYNNNNRTG 5 cut(s) 126, 477, 483, 1227, 1430
SmlI CTYRAG 4 cut(s) 504, 1576, 1692, 2073
SmoI CTYRAG 4 cut(s) 504, 1576, 1692, 2073
SphI GCATGC 3 cut(s) 218, 1559, 2126
SsiI CCGC 4 cut(s) 346, 963, 1824, 2285
SspMI CTAG 6 cut(s) 312, 393, 1265, 1497, 1926, 2250
StyD4I CCNGG 3 cut(s) 405, 1181, 1970
StyI CCWWGG 4 cut(s) 984, 1043, 1167, 1523
TaiI ACGT 3 cut(s) 724, 2087, 2387
TaqII GACCGA 1 cut(s) 1894
TatI WGTACW 4 cut(s) 913, 1562, 1665, 2349
TauI GCSGC 1 cut(s) 965
TfiI GAWTC 8 cut(s) 527, 608, 638, 989, 1091, 1982, 2158, 2444
Tru1I TTAA 9 cut(s) 1298, 1395, 1446, 1550, 1619, 1788, 2057, 2225, 2321
Tru9I TTAA 9 cut(s) 1298, 1395, 1446, 1550, 1619, 1788, 2057, 2225, 2321
TscAI CASTG 4 cut(s) 139, 172, 522, 594
TseFI GTSAC 2 cut(s) 101, 2080
TseI GCWGC 4 cut(s) 545, 727, 959, 2091
Tsp45I GTSAC 2 cut(s) 101, 2080
TspDTI ATGAA 8 cut(s) 110, 629, 716, 1245, 1518, 1523, 2243, 2550
TspRI CASTG 4 cut(s) 139, 172, 522, 594
Van91I CCANNNNNTGG 1 cut(s) 2029
VpaK11BI GGWCC 3 cut(s) 690, 1047, 1479
VspI ATTAAT 1 cut(s) 2225
XapI RAATTY 4 cut(s) 1751, 1953, 2046, 2262
XceI RCATGY 4 cut(s) 218, 752, 1559, 2126
XmiI GTMKAC 2 cut(s) 1569, 1967
XmnI GAANNNNTTC 3 cut(s) 1593, 1995, 2133
XspI CTAG 6 cut(s) 312, 393, 1265, 1497, 1926, 2250
ZrmI AGTACT 1 cut(s) 1564
Zsp2I ATGCAT 2 cut(s) 778, 2281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.