Prupe.2G291000_v2.0.a1

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000325
Physical Location & Seq
Forward (+)
28476326 .. 28480734
4409 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G291000.1

Sequence Viewer

Length: 2682 bp
ATGGAAAGGGAGGATGATGATTTTGGTAGTCTTCATGAGGATAGCATGGATGTCGGACTTCAAGCAACAAATAGGTTGGACTTGAATGTAGAGCAGGACTCCCGCAGCCCAAAAGTTGTCTATGTCAACGGCACTCAGTCTAATCCTCCCTCCATAGGTGCAGACAGTAAAGATTCAGTCTTAGAAGTTGGTACAGAGTTTGAGTCTGATGAACATGCCTACAAATCTTACAATAAATATGCCAGGTTGGTGGGTTTTAATGTTAGGAAAGACTGGGTAAATAGGAGTAAGGTACATGGTCAGGTGGTATCTAGGAAGTTCACTTGTTCTAAAGAGGGGTATCGGCGGAAGGACAAAAGAGATGTTAATGTAAAGAAACATCGAAAGGAAACAAGAACTGGTTGCTTGGCTCATATGATCATCACCCGTCAACCTGATGGTAAATATCGGGTTACACAATTTGAAGAACAACACAATCATGGCAATGTAAATTCAAGTATTGCTCAAGCATTGCCAGAACAACACAATCATGACAATGTAAATCTAAGTATTGCTCAAGCATTGCCAGAACAAAGAGAATGCACTGTTCCTGAAGCTGCTGATGCTGACTCGGTAAAAGAGTTAGGATCATTGTCAAAATCGGCACTAGACTCGATGAATAGAGGGTTTAGGGTAAGGGAATCTGTTGATAGTTTTGCCTTAGATTTTGAAAATTATCTTCAATCTGAAAGGACTCGAGATATGAAGGAAGGAGAGGTGGGACGTTTGCTGCATTACTTTCAAAGGCAGCACTTTGAAAACCCATCGTTCTTTTACGCAATACAGGTTGATACTGATGATAAAGTGAGTAACATACTTTGGGCTGATGATAATATGGTATCAGATTATGACCATTTTGGGGATGTGGTTTGTCTAGACACGGTTTGCAGAGCAGACAAGAATTGCCTGCCATTTGTACAGTTTGTAGGAGTAAATAATCATAAACAGGTAGTTATCTTTTCTGCTGCACTGTTGTATGATGACACTGTTCAATCTTATAAGTGGCTATTTCAAACTTTTGTGGAGTCGATGTCCGGGAAGAAACCAAAGGCCATTCTTACCGATCAAGATGCAGCAATTGTTGAGGCAATCAATTCAGTTTTACCTGAAACAGACCATCGGATATGCACATGGCAAATGTGCCAGAATGCTCTCAAGCACCTTAACCACATAGTAAAAGATACCGAATCTTTTGCCAATGATTTCAAGAGCTGTATATATGACGAAAAAGATGAAGATGGGTTTGTGTATGCTTGGGGGAATATGCTGGATAATTATGGTCTTCAGCAGAATGACTGGTTAAAATGGATGTTTAGGGAACGAGAGAAATGGGCTGTGGTATATGGCAGGAATACTTTTTTTGTTGACAGAAAAGGCTCACATCTGGTTGAAAGTTTGTTTCATGATTTGAGAAATTACCTATACTCTGACCTAGATGTGCTTGATTTTGTTAAGTATTTCGAAAGGTTGGTAGATGAGCAACGTTACAAAGAAATAGAAGCCAATGATGAAATGAACCGCTGCATGCCAAGACTAATGGGGAATGTGATTTTACTAAAGCATGCAAGTGATGTTTACACTCCAAGGGCATTTGAAGTGTTCCAGCGAGGATATGAGAAGTGTTTGAATATTGTTGTTAACCAATGCAGTGAGAATGGGCCATTGTTCGAGTACAAAACCAACATATTTGGTAAAAGTAGAGAACACACCGTTACATTCAACTCTTCTGATGACGCAGTTATTTGCAGCTGCAAGAAATTTGACTCTGTTGGGTTTCTATGTAGCCATGCTCTTAAAGTACTTGATCACATGAATATAAAGGTTGTCCCCTCCAAATATATCTTGAAGAGATGGACAAAAAATGCAAGGTTAGGGAGTGCAAGAGAGAATGATGTGTCCTCCATCAGGGATAACCCAAAGCTTGTTGTGGCAAGCCGTTACAAAAATATGTGCGGCCGAATTATTATGTTATCAGCCAAGGCTTCTGCATCTGAGGAAGCATTTCAATTTGCTGTTGGACAACTTGATGAAGTGATGGAAGGTGTGGAGAAAATCTTGACATTAAAACCTCAGGATGCTCAAGCTTTCACCTCAAGTAGCACCGCAAATGCTTCTGATAGTGAACGTGCAGTGGTTTTTCCAGATGGAAATGCAATTGAAGATCAGGATGACAGTGTAGTAAAAGGAGCAAAGGAAAAAGAGACGGCTGTTTTTGACAAAGGTCAATTAACAAATGTGAATGGTGAATTCTCTAGTACAAAAAGAATTCAGAATGTAGATACATCCCTACAAAACACTGATTCCTGCATTTCGAGTCCGTCTTTGTATGTTTCACCTGAAGGGACAACAGCAAATCCCATTATGCAGGGTTTATACAATTTTGAAGCGAATCAGGTGGTCCAGTGTATGTACCAACAAGATAATCTGGTGCTGGAAGAGCATTCCAATCCTAACATGTATCAACCACTCAACTTCTTTTCTAACCAACACGATTCACCTGGCCATTCTCAACTACTACAGGAACCTCTGATCAATGGCACATACCAAGAGCCCGTATCAAGCACCCCTGAATTGAGGCAGGCAATGGATCTCGATGTCCAACATCCACATTCATCTTCATTCTTGCTTTTGGATCGTGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

894

Amino Acids

101.82

Weight (kDa)

5.35

Isoelectric Point (pI)

38.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000325)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g24391 FvH4_2g38071 FvH4_3g07131 FvH4_3g22481 FvH4_4g15809 FvH4_5g37230 FvH4_7g25201 FvH4_7g29092 FvH4_7g29093
malus_domestica MD01G1197600.v1.1 MD17G1186900.v1.1
prunus_persica Prupe.1G227400_v2.0.a1 Prupe.2G291000_v2.0.a1 Prupe.4G268600_v2.0.a1 Prupe.5G094100_v2.0.a1
pyrus_communis pycom01g20780 pycom17g19620
rosa_chinensis RchiOBHm_Chr1g0376821 RchiOBHm_Chr5g0061941 RchiOBHm_Chr5g0078991 RchiOBHm_Chr6g0276821 RchiOBHm_Chr7g0191321
rosa_laevigata RLG00000007883 RLG00000008804 RLG00000010632 RLG00000026567 RLG00000035244 RLG00000036018 RLG00000036909
rosa_multiflora Rmu_sc0001036.1_g000026 Rmu_sc0001556.1_g000021 Rmu_sc0001974.1_g000022 Rmu_sc0002113.1_g000006 Rmu_sc0002572.1_g000008 Rmu_sc0004808.1_g000011 Rmu_sc0005117.1_g000017 Rmu_sc0005319.1_g000016 Rmu_sc0008432.1_g000005 Rmu_sc0010475.1_g000001 Rmu_sc0015522.1_g000003 Rmu_ssc0000066.1_g000009 Rmu_ssc0000400.1_g000102 Rmu_ssc0000400.1_g000103
rosa_roxburghii Rroxscaffold_1G00071290 Rroxscaffold_2G00141280 Rroxscaffold_3G00233790 Rroxscaffold_4G00297530 Rroxscaffold_5G00368860 Rroxscaffold_5G00386220 Rroxscaffold_7G00159400
rosa_rugosa Rorug01G0146800.1 Rorug01G0162100.1 Rorug01G0162200.1 Rorug01G0398600 Rorug01G0398700 Rorug02G0344200 Rorug02G0344300 Rorug02G0344400 Rorug03G0046200 Rorug03G0153200 Rorug04G0182500 Rorug04G0182600 Rorug05G0257700 Rorug05G0386400 Rorug05G0386400 Rorug05G0386500 Rorug05G0460900.1 Rorug05G0467000 Rorug07G0110400
rosa_samantha Rh1AG183500 Rh1AG416000 Rh1BG023600 Rh1BG145400 Rh1BG145500 Rh1BG278800 Rh1BG375400 Rh1CG389200 Rh1DG166300 Rh1DG176900 Rh1DG309900 Rh1DG406000 Rh2BG439100 Rh2BG502200 Rh2CG314800 Rh2CG517400 Rh2CG532000 Rh2DG449100 Rh3BG109900 Rh3CG230400 Rh3CG246600 Rh3CG289400 Rh3CG289500 Rh3DG120600 Rh4AG144400 Rh4AG408200 Rh4BG419300 Rh4CG101900 Rh4CG151000 Rh4CG226900 Rh4DG235400 Rh5AG265900 Rh5AG375200 Rh5CG559600 Rh5DG218200 Rh6AG074500 Rh6BG291800 Rh6CG292800 Rh6DG284900
rosa_wichuraiana Rw0G013240 Rw1G036490 Rw5G024920 Rw5G030730 Rw5G033710 Rw6G033840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1038
AciI CCGC 5 cut(s) 103, 346, 1558, 1992, 2142
AclI AACGTT 1 cut(s) 1522
AclWI GGATC 3 cut(s) 634, 2634, 2679
AcoI YGGCCR 2 cut(s) 1993, 2539
AcsI RAATTY 4 cut(s) 490, 1796, 2285, 2304
AcuI CTGAAG 3 cut(s) 612, 1307, 2397
AfaI GTAC 7 cut(s) 193, 294, 957, 1712, 1839, 2296, 2450
AfiI CCNNNNNNNGG 3 cut(s) 155, 898, 1944
AflIII ACRYGT 1 cut(s) 2493
AjnI CCWGG 2 cut(s) 242, 2536
AluBI AGCT 5 cut(s) 596, 1251, 1788, 1960, 2123
AluI AGCT 5 cut(s) 596, 1251, 1788, 1960, 2123
Alw26I GTCTC 1 cut(s) 2234
AlwI GGATC 3 cut(s) 634, 2634, 2679
Ama87I CYCGRG 1 cut(s) 735
AoxI GGCC 4 cut(s) 1089, 1697, 1993, 2539
ApeKI GCWGC 9 cut(s) 105, 596, 769, 787, 1004, 1112, 1560, 1785, 1788
ApoI RAATTY 4 cut(s) 490, 1796, 2285, 2304
Asp700I GAANNNNTTC 1 cut(s) 2040
AspS9I GGNCC 2 cut(s) 1697, 2437
AsuC2I CCSGG 1 cut(s) 1075
AsuHPI GGTGA 5 cut(s) 415, 2119, 2294, 2364, 2526
AsuII TTCGAA 1 cut(s) 1500
AvaI CYCGRG 1 cut(s) 735
AvaII GGWCC 1 cut(s) 2437
AxyI CCTNAGG 1 cut(s) 2109
BalI TGGCCA 1 cut(s) 2541
BanII GRGCYC 1 cut(s) 2592
BbsI GAAGAC 2 cut(s) 23, 1313
BbvI GCAGC 9 cut(s) 117, 583, 756, 799, 991, 1124, 1547, 1775, 1797
BccI CCATC 8 cut(s) 431, 811, 1164, 1271, 1884, 1949, 2068, 2177
BceAI ACGGC 3 cut(s) 145, 1959, 2259
BcgI CGANNNNNNTGC 8 cut(s) 34, 68, 633, 667, 1091, 1125, 1214, 1248
BciT130I CCWGG 2 cut(s) 244, 2538
BclI TGATCA 3 cut(s) 417, 1843, 2568
BcnI CCSGG 1 cut(s) 1075
BcoDI GTCTC 1 cut(s) 2234
BfaI CTAG 5 cut(s) 312, 647, 914, 1472, 2292
BfmI CTRYAG 1 cut(s) 2555
BmcAI AGTACT 1 cut(s) 1839
Bme1390I CCNGG 3 cut(s) 244, 1075, 2538
Bme18I GGWCC 1 cut(s) 2437
BmeT110I CYCGRG 1 cut(s) 735
BmgT120I GGNCC 2 cut(s) 1697, 2437
BmiI GGNNCC 1 cut(s) 2562
BmrFI CCNGG 3 cut(s) 244, 1075, 2538
BmrI ACTGGG 1 cut(s) 283
BmsI GCATC 4 cut(s) 592, 1099, 2036, 2104
BmuI ACTGGG 1 cut(s) 283
BoxI GACNNNNGTC 1 cut(s) 2259
BpiI GAAGAC 2 cut(s) 23, 1313
BplI GAGNNNNNCTC 2 cut(s) 83, 115
Bpu14I TTCGAA 1 cut(s) 1500
BpuEI CTTGAG 5 cut(s) 489, 540, 1178, 2103, 2116
BpuMI CCSGG 1 cut(s) 1075
BsaJI CCNNGG 2 cut(s) 1622, 2016
BsaXI ACNNNNNCTCC 2 cut(s) 1055, 1085
Bsc4I CCNNNNNNNGG 3 cut(s) 155, 898, 1944
Bse1I ACTGG 4 cut(s) 278, 403, 1340, 2440
Bse21I CCTNAGG 1 cut(s) 2109
Bse3DI GCAATG 4 cut(s) 490, 509, 560, 2628
BseBI CCWGG 2 cut(s) 244, 2538
BseDI CCNNGG 2 cut(s) 1622, 2016
BseGI GGATG 8 cut(s) 19, 55, 907, 1353, 2119, 2212, 2321, 2641
BseLI CCNNNNNNNGG 3 cut(s) 155, 898, 1944
BseMI GCAATG 4 cut(s) 490, 509, 560, 2628
BseMII CTCAG 3 cut(s) 149, 2022, 2123
BseNI ACTGG 4 cut(s) 278, 403, 1340, 2440
BseX3I CGGCCG 1 cut(s) 1993
BseXI GCAGC 9 cut(s) 117, 583, 756, 799, 991, 1124, 1547, 1775, 1797
BsgI GTGCAG 3 cut(s) 180, 990, 2187
Bsh1285I CGRYCG 1 cut(s) 1996
BshFI GGCC 4 cut(s) 1091, 1699, 1995, 2541
BsiEI CGRYCG 1 cut(s) 1996
BsiHKCI CYCGRG 1 cut(s) 735
BsiSI CCGG 1 cut(s) 1074
BslFI GGGAC 3 cut(s) 774, 1850, 2395
BslI CCNNNNNNNGG 3 cut(s) 155, 898, 1944
BsmAI GTCTC 1 cut(s) 2234
BsmBI CGTCTC 1 cut(s) 2234
BsmFI GGGAC 3 cut(s) 774, 1850, 2395
BsmI GAATGC 3 cut(s) 584, 1192, 2479
BsnI GGCC 4 cut(s) 1091, 1699, 1995, 2541
BsoBI CYCGRG 1 cut(s) 735
Bsp119I TTCGAA 1 cut(s) 1500
Bsp1286I GDGCHC 1 cut(s) 2592
Bsp1407I TGTACA 1 cut(s) 955
Bsp143I GATC 8 cut(s) 417, 626, 1102, 1843, 2200, 2568, 2626, 2671
BspACI CCGC 5 cut(s) 103, 346, 1558, 1992, 2142
BspANI GGCC 4 cut(s) 1091, 1699, 1995, 2541
BspCNI CTCAG 3 cut(s) 148, 2023, 2122
BspHI TCATGA 3 cut(s) 34, 529, 1441
BspLI GGNNCC 1 cut(s) 2562
BspPI GGATC 3 cut(s) 634, 2634, 2679
BspQI GCTCTTC 1 cut(s) 2469
BspT104I TTCGAA 1 cut(s) 1500
BsrDI GCAATG 4 cut(s) 490, 509, 560, 2628
BsrGI TGTACA 1 cut(s) 955
BsrI ACTGG 4 cut(s) 278, 403, 1340, 2440
BssECI CCNNGG 2 cut(s) 1622, 2016
BssMI GATC 8 cut(s) 417, 626, 1102, 1843, 2200, 2568, 2626, 2671
BssT1I CCWWGG 2 cut(s) 1622, 2016
Bst2UI CCWGG 2 cut(s) 244, 2538
Bst4CI ACNGT 8 cut(s) 167, 586, 922, 960, 1011, 1027, 1750, 2213
Bst6I CTCTTC 3 cut(s) 1768, 1880, 2469
BstAUI TGTACA 1 cut(s) 955
BstBI TTCGAA 1 cut(s) 1500
BstC8I GCNNGC 5 cut(s) 947, 1565, 1602, 1972, 2619
BstDEI CTNAG 6 cut(s) 135, 181, 545, 700, 2031, 2109
BstENI CCTNNNNNAGG 1 cut(s) 1942
BstF5I GGATG 8 cut(s) 19, 55, 907, 1353, 2119, 2212, 2321, 2641
BstKTI GATC 8 cut(s) 420, 629, 1105, 1846, 2203, 2571, 2629, 2674
BstMAI GTCTC 1 cut(s) 2234
BstMBI GATC 8 cut(s) 417, 626, 1102, 1843, 2200, 2568, 2626, 2671
BstMCI CGRYCG 1 cut(s) 1996
BstMWI GCNNNNNNNGC 2 cut(s) 602, 2476
BstNI CCWGG 2 cut(s) 244, 2538
BstNSI RCATGY 4 cut(s) 218, 1567, 1604, 2497
BstPAI GACNNNNGTC 1 cut(s) 2259
BstSCI CCNGG 3 cut(s) 242, 1073, 2536
BstSFI CTRYAG 1 cut(s) 2555
BstV1I GCAGC 9 cut(s) 117, 583, 756, 799, 991, 1124, 1547, 1775, 1797
BstV2I GAAGAC 2 cut(s) 23, 1313
BstX2I RGATCY 1 cut(s) 2626
BstXI CCANNNNNNTGG 1 cut(s) 250
BstYI RGATCY 1 cut(s) 2626
BstZI CGGCCG 1 cut(s) 1993
Bsu36I CCTNAGG 1 cut(s) 2109
BsuRI GGCC 4 cut(s) 1091, 1699, 1995, 2541
BtsCI GGATG 8 cut(s) 19, 55, 907, 1353, 2119, 2212, 2321, 2641
BtsI GCAGTG 2 cut(s) 1693, 2175
BtsIMutI CAGTG 8 cut(s) 582, 1007, 1023, 1693, 2175, 2218, 2334, 2447
Cac8I GCNNGC 5 cut(s) 947, 1565, 1602, 1972, 2619
CciI TCATGA 3 cut(s) 34, 529, 1441
Cfr13I GGNCC 2 cut(s) 1697, 2437
CseI GACGC 1 cut(s) 1781
Csp6I GTAC 7 cut(s) 192, 293, 956, 1711, 1838, 2295, 2449
CviQI GTAC 7 cut(s) 192, 293, 956, 1711, 1838, 2295, 2449
DdeI CTNAG 6 cut(s) 135, 181, 545, 700, 2031, 2109
DpnI GATC 8 cut(s) 419, 628, 1104, 1845, 2202, 2570, 2628, 2673
DpnII GATC 8 cut(s) 417, 626, 1102, 1843, 2200, 2568, 2626, 2671
EaeI YGGCCR 2 cut(s) 1993, 2539
EagI CGGCCG 1 cut(s) 1993
Eam1104I CTCTTC 3 cut(s) 1768, 1880, 2469
EarI CTCTTC 3 cut(s) 1768, 1880, 2469
EciI GGCGGA 1 cut(s) 361
EclXI CGGCCG 1 cut(s) 1993
Eco130I CCWWGG 2 cut(s) 1622, 2016
Eco24I GRGCYC 1 cut(s) 2592
Eco47I GGWCC 1 cut(s) 2437
Eco52I CGGCCG 1 cut(s) 1993
Eco57I CTGAAG 3 cut(s) 612, 1307, 2397
Eco81I CCTNAGG 1 cut(s) 2109
Eco88I CYCGRG 1 cut(s) 735
EcoNI CCTNNNNNAGG 1 cut(s) 1942
EcoRI GAATTC 2 cut(s) 2285, 2304
EcoRII CCWGG 2 cut(s) 242, 2536
EcoT14I CCWWGG 2 cut(s) 1622, 2016
EcoT38I GRGCYC 1 cut(s) 2592
ErhI CCWWGG 2 cut(s) 1622, 2016
Esp3I CGTCTC 1 cut(s) 2234
FaqI GGGAC 3 cut(s) 774, 1850, 2395
FauI CCCGC 1 cut(s) 110
FauNDI CATATG 1 cut(s) 414
FbaI TGATCA 3 cut(s) 417, 1843, 2568
FokI GGATG 8 cut(s) 26, 62, 914, 1360, 2126, 2219, 2308, 2628
FriOI GRGCYC 1 cut(s) 2592
FspBI CTAG 5 cut(s) 312, 647, 914, 1472, 2292
HaeIII GGCC 4 cut(s) 1091, 1699, 1995, 2541
HapII CCGG 1 cut(s) 1074
HgaI GACGC 1 cut(s) 1781
HincII GTYRAC 4 cut(s) 127, 431, 1405, 1678
HindII GTYRAC 4 cut(s) 127, 431, 1405, 1678
HindIII AAGCTT 2 cut(s) 1958, 2121
HpaI GTTAAC 1 cut(s) 1678
HpaII CCGG 1 cut(s) 1074
HphI GGTGA 5 cut(s) 415, 2119, 2294, 2364, 2526
Hpy166II GTNNAC 7 cut(s) 127, 321, 431, 1405, 1615, 1678, 2162
Hpy8I GTNNAC 7 cut(s) 127, 321, 431, 1405, 1615, 1678, 2162
HpyAV CCTTC 5 cut(s) 343, 739, 743, 2072, 2372
HpyCH4III ACNGT 8 cut(s) 167, 586, 922, 960, 1011, 1027, 1750, 2213
HpyCH4IV ACGT 3 cut(s) 763, 1522, 2164
HpyF10VI GCNNNNNNNGC 2 cut(s) 602, 2476
HpyF3I CTNAG 6 cut(s) 135, 181, 545, 700, 2031, 2109
HpySE526I ACGT 3 cut(s) 763, 1522, 2164
Ksp22I TGATCA 3 cut(s) 417, 1843, 2568
KspAI GTTAAC 1 cut(s) 1678
Kzo9I GATC 8 cut(s) 417, 626, 1102, 1843, 2200, 2568, 2626, 2671
LguI GCTCTTC 1 cut(s) 2469
LmnI GCTCC 1 cut(s) 2225
Lsp1109I GCAGC 9 cut(s) 117, 583, 756, 799, 991, 1124, 1547, 1775, 1797
LweI GCATC 4 cut(s) 592, 1099, 2036, 2104
MaeI CTAG 5 cut(s) 312, 647, 914, 1472, 2292
MaeII ACGT 3 cut(s) 763, 1522, 2164
MaeIII GTNAC 5 cut(s) 451, 848, 1523, 1750, 1976
MalI GATC 8 cut(s) 419, 628, 1104, 1845, 2202, 2570, 2628, 2673
MboI GATC 8 cut(s) 417, 626, 1102, 1843, 2200, 2568, 2626, 2671
MfeI CAATTG 2 cut(s) 1116, 2193
MflI RGATCY 1 cut(s) 2626
MhlI GDGCHC 1 cut(s) 2592
MlsI TGGCCA 1 cut(s) 2541
MluNI TGGCCA 1 cut(s) 2541
MlyI GAGTC 8 cut(s) 92, 212, 602, 644, 727, 1073, 1796, 2362
MmeI TCCRAC 4 cut(s) 34, 57, 2035, 2662
Mox20I TGGCCA 1 cut(s) 2541
MroXI GAANNNNTTC 1 cut(s) 2040
MscI TGGCCA 1 cut(s) 2541
MseI TTAA 9 cut(s) 258, 366, 1203, 1340, 1491, 1677, 1833, 2102, 2267
MslI CAYNNNNRTG 5 cut(s) 477, 483, 528, 534, 1605
Msp20I TGGCCA 1 cut(s) 2541
MspA1I CMGCKG 2 cut(s) 1560, 1788
MspI CCGG 1 cut(s) 1074
MspR9I CCNGG 3 cut(s) 244, 1075, 2538
MunI CAATTG 2 cut(s) 1116, 2193
Mva1269I GAATGC 3 cut(s) 584, 1192, 2479
MvaI CCWGG 2 cut(s) 244, 2538
MwoI GCNNNNNNNGC 2 cut(s) 602, 2476
NciI CCSGG 1 cut(s) 1075
NdeI CATATG 1 cut(s) 414
NdeII GATC 8 cut(s) 417, 626, 1102, 1843, 2200, 2568, 2626, 2671
NlaIV GGNNCC 1 cut(s) 2562
NspI RCATGY 4 cut(s) 218, 1567, 1604, 2497
NspV TTCGAA 1 cut(s) 1500
PaeI GCATGC 2 cut(s) 1567, 1604
PaeR7I CTCGAG 1 cut(s) 735
PagI TCATGA 3 cut(s) 34, 529, 1441
PciI ACATGT 1 cut(s) 2493
PciSI GCTCTTC 1 cut(s) 2469
PctI GAATGC 3 cut(s) 584, 1192, 2479
PdmI GAANNNNTTC 1 cut(s) 2040
PfeI GAWTC 6 cut(s) 173, 680, 1226, 2339, 2428, 2531
PfoI TCCNGGA 1 cut(s) 1073
PleI GAGTC 8 cut(s) 92, 211, 602, 644, 727, 1072, 1796, 2361
PpsI GAGTC 8 cut(s) 92, 211, 602, 644, 727, 1072, 1796, 2361
PscI ACATGT 1 cut(s) 2493
PshAI GACNNNNGTC 1 cut(s) 2259
PsiI TTATAA 1 cut(s) 1038
Psp1406I AACGTT 1 cut(s) 1522
Psp6I CCWGG 2 cut(s) 242, 2536
PspGI CCWGG 2 cut(s) 242, 2536
PspN4I GGNNCC 1 cut(s) 2562
PspPI GGNCC 2 cut(s) 1697, 2437
PsuI RGATCY 1 cut(s) 2626
PvuII CAGCTG 1 cut(s) 1788
RsaI GTAC 7 cut(s) 193, 294, 957, 1712, 1839, 2296, 2450
RsaNI GTAC 7 cut(s) 192, 293, 956, 1711, 1838, 2295, 2449
RseI CAYNNNNRTG 5 cut(s) 477, 483, 528, 534, 1605
SapI GCTCTTC 1 cut(s) 2469
SaqAI TTAA 9 cut(s) 258, 366, 1203, 1340, 1491, 1677, 1833, 2102, 2267
Sau3AI GATC 8 cut(s) 417, 626, 1102, 1843, 2200, 2568, 2626, 2671
Sau96I GGNCC 2 cut(s) 1697, 2437
ScaI AGTACT 1 cut(s) 1839
SchI GAGTC 8 cut(s) 92, 212, 602, 644, 727, 1073, 1796, 2362
ScrFI CCNGG 3 cut(s) 244, 1075, 2538
SduI GDGCHC 1 cut(s) 2592
SfaNI GCATC 4 cut(s) 592, 1099, 2036, 2104
SfcI CTRYAG 1 cut(s) 2555
Sfr274I CTCGAG 1 cut(s) 735
SfuI TTCGAA 1 cut(s) 1500
SinI GGWCC 1 cut(s) 2437
SlaI CTCGAG 1 cut(s) 735
SmiMI CAYNNNNRTG 5 cut(s) 477, 483, 528, 534, 1605
SmlI CTYRAG 6 cut(s) 504, 555, 735, 1193, 2118, 2131
SmoI CTYRAG 6 cut(s) 504, 555, 735, 1193, 2118, 2131
SphI GCATGC 2 cut(s) 1567, 1604
SsiI CCGC 5 cut(s) 103, 346, 1558, 1992, 2142
SspI AATATT 1 cut(s) 1669
SspMI CTAG 5 cut(s) 312, 647, 914, 1472, 2292
StyD4I CCNGG 3 cut(s) 242, 1073, 2536
StyI CCWWGG 2 cut(s) 1622, 2016
TaaI ACNGT 8 cut(s) 167, 586, 922, 960, 1011, 1027, 1750, 2213
TaiI ACGT 3 cut(s) 766, 1525, 2167
TaqI TCGA 8 cut(s) 382, 653, 736, 1067, 1500, 1707, 2351, 2631
TatI WGTACW 4 cut(s) 955, 1710, 1837, 2294
TauI GCSGC 1 cut(s) 1995
TfiI GAWTC 6 cut(s) 173, 680, 1226, 2339, 2428, 2531
Tru1I TTAA 9 cut(s) 258, 366, 1203, 1340, 1491, 1677, 1833, 2102, 2267
Tru9I TTAA 9 cut(s) 258, 366, 1203, 1340, 1491, 1677, 1833, 2102, 2267
TscAI CASTG 8 cut(s) 589, 1014, 1030, 1693, 2175, 2218, 2341, 2447
TseI GCWGC 9 cut(s) 105, 596, 769, 787, 1004, 1112, 1560, 1785, 1788
TspGWI ACGGA 1 cut(s) 2346
TspRI CASTG 8 cut(s) 589, 1014, 1030, 1693, 2175, 2218, 2341, 2447
VpaK11BI GGWCC 1 cut(s) 2437
XagI CCTNNNNNAGG 1 cut(s) 1942
XapI RAATTY 4 cut(s) 490, 1796, 2285, 2304
XbaI TCTAGA 1 cut(s) 913
XceI RCATGY 4 cut(s) 218, 1567, 1604, 2497
XhoI CTCGAG 1 cut(s) 735
XmnI GAANNNNTTC 1 cut(s) 2040
XspI CTAG 5 cut(s) 312, 647, 914, 1472, 2292
ZrmI AGTACT 1 cut(s) 1839
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.