Rh3BG109900

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000325
Physical Location & Seq
Reverse (-)
8907394 .. 8913117
5724 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG109900.1

Sequence Viewer

Length: 1347 bp
ATGGAACATGGTCTATGCCCAGTAATTTTGGAAACTGATTGTTTGGTTTTGAAGCAACAATTGTGTCAGGAGAAGGTGCATAATACTTCTATTCTTGGAAGGTTATATGAGGAGCTCAAACAAGATTTCGTAGAGCCCCTACGGTGTTCGACGACCGAGCAGTGGCTGGTGCTGAAGCTCCGGGTCATCACCGCATCTCCTCCGCCGCTCGCAGAGCAGAGGATCGTGCCTCTCCCGGAGAAGGTCAAGAAGAGCCGCCGGGGACCGAGGTCCCGGAGCTCACAGTATAGCGGCGGCGTCACGTTTTATCGGAGGACCGGGGGATGGGAATCGCATATTTGGCCCCCGGTCATCGGTGTTCTAATCCAAACAGTTAGGCGGTATAAATTCTGGGTTTGGTGTTCTAATCCAAACAGTTCGATCATCAATTCTGGGTTAATGGATACCCAGAATTGTACGAGCTTGGGCAATCAACTAATAAGTGATTCCGAGGACTTACAAGTAAGTGCACATATGCTGCAACATGGAGCAGAGGTGTATACTCCAGAGGTTTTCTTGCTGTTTCAGAAAGAATTTGTGAGAATTCATAATTATAGTACTTACAAGGTTGTGCTTGACAAGAAGAATGTGAAGAAGATTCCACCGCAATACATTTTAAAGCGATGGACAAGACAAGCAAAAATTATGAGTATTACTAGTTATCATCCTACTGAGATTCATGGTAATCCTAAGGAGTCGATTGGCAGACGGTATGGCTACTTGTGCCGCACTTCTCGTGATATTTTAACTGTTGCAGCAGATGATGAAGAGTTAACGAGATATGCACATGAATGTTTGGTTGAGATGCTCAAAGGCTTAGAGTTAATAAAGAAAAATCGCACTGAGAAAGAGGGGAGAAGTTCTAGTGATAGCAGCGAAGTGAATGCTACTTTTGGTCAAAGTGAAGAGGTTGAGGGAATAGTTCAATCTAATGCTTGTGAAACAACAATTATCCGTGGAGTTAAAAGAAAAGCTACAATTGGCCGTCCACGTACCAGATTCAAAGACCCGGCTGAAAAAAAAAAGAGTAAAGTACCAAAGAAAAGCACAAAAGCTCCCACAAGAAGGAAAATACCCATGCATGAATTTGAAAGCATTTTGGTCAGTTCAGAAACACACCAAAATAGTGAACATGATGTTCAACTATCTGGTGTTTTGACTCAAGTGAGATTGGAACTTGGGACCTCGGACGTAGGGTGGATGCTGAGTAAAGAGGATCAGATTTTGGATGACAACCCTACTGAAGCTTATTTGCTTTTGGATACTGCTGAAGCTTATTCGTCTATAGAAGATTCAGTCAACAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

448

Amino Acids

51.09

Weight (kDa)

8.78

Isoelectric Point (pI)

56.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000325)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g24391 FvH4_2g38071 FvH4_3g07131 FvH4_3g22481 FvH4_4g15809 FvH4_5g37230 FvH4_7g25201 FvH4_7g29092 FvH4_7g29093
malus_domestica MD01G1197600.v1.1 MD17G1186900.v1.1
prunus_persica Prupe.1G227400_v2.0.a1 Prupe.2G291000_v2.0.a1 Prupe.4G268600_v2.0.a1 Prupe.5G094100_v2.0.a1
pyrus_communis pycom01g20780 pycom17g19620
rosa_chinensis RchiOBHm_Chr1g0376821 RchiOBHm_Chr5g0061941 RchiOBHm_Chr5g0078991 RchiOBHm_Chr6g0276821 RchiOBHm_Chr7g0191321
rosa_laevigata RLG00000007883 RLG00000008804 RLG00000010632 RLG00000026567 RLG00000035244 RLG00000036018 RLG00000036909
rosa_multiflora Rmu_sc0001036.1_g000026 Rmu_sc0001556.1_g000021 Rmu_sc0001974.1_g000022 Rmu_sc0002113.1_g000006 Rmu_sc0002572.1_g000008 Rmu_sc0004808.1_g000011 Rmu_sc0005117.1_g000017 Rmu_sc0005319.1_g000016 Rmu_sc0008432.1_g000005 Rmu_sc0010475.1_g000001 Rmu_sc0015522.1_g000003 Rmu_ssc0000066.1_g000009 Rmu_ssc0000400.1_g000102 Rmu_ssc0000400.1_g000103
rosa_roxburghii Rroxscaffold_1G00071290 Rroxscaffold_2G00141280 Rroxscaffold_3G00233790 Rroxscaffold_4G00297530 Rroxscaffold_5G00368860 Rroxscaffold_5G00386220 Rroxscaffold_7G00159400
rosa_rugosa Rorug01G0146800.1 Rorug01G0162100.1 Rorug01G0162200.1 Rorug01G0398600 Rorug01G0398700 Rorug02G0344200 Rorug02G0344300 Rorug02G0344400 Rorug03G0046200 Rorug03G0153200 Rorug04G0182500 Rorug04G0182600 Rorug05G0257700 Rorug05G0386400 Rorug05G0386400 Rorug05G0386500 Rorug05G0460900.1 Rorug05G0467000 Rorug07G0110400
rosa_samantha Rh1AG183500 Rh1AG416000 Rh1BG023600 Rh1BG145400 Rh1BG145500 Rh1BG278800 Rh1BG375400 Rh1CG389200 Rh1DG166300 Rh1DG176900 Rh1DG309900 Rh1DG406000 Rh2BG439100 Rh2BG502200 Rh2CG314800 Rh2CG517400 Rh2CG532000 Rh2DG449100 Rh3BG109900 Rh3CG230400 Rh3CG246600 Rh3CG289400 Rh3CG289500 Rh3DG120600 Rh4AG144400 Rh4AG408200 Rh4BG419300 Rh4CG101900 Rh4CG151000 Rh4CG226900 Rh4DG235400 Rh5AG265900 Rh5AG375200 Rh5CG559600 Rh5DG218200 Rh6AG074500 Rh6BG291800 Rh6CG292800 Rh6DG284900
rosa_wichuraiana Rw0G013240 Rw1G036490 Rw5G024920 Rw5G030730 Rw5G033710 Rw6G033840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 208
AccI GTMKAC 1 cut(s) 539
AciI CCGC 9 cut(s) 192, 203, 206, 256, 291, 294, 379, 644, 766
AclWI GGATC 2 cut(s) 230, 1263
AcoI YGGCCR 1 cut(s) 1021
AcsI RAATTY 4 cut(s) 386, 572, 582, 1124
AcuI CTGAAG 3 cut(s) 194, 1302, 1329
AcyI GRCGYC 1 cut(s) 297
AfaI GTAC 4 cut(s) 457, 598, 1033, 1074
AfiI CCNNNNNNNGG 5 cut(s) 162, 241, 324, 353, 1104
AgsI TTSAA 5 cut(s) 52, 965, 1042, 1130, 1181
AhlI ACTAGT 1 cut(s) 695
AluBI AGCT 8 cut(s) 115, 178, 279, 462, 1013, 1094, 1286, 1313
AluI AGCT 8 cut(s) 115, 178, 279, 462, 1013, 1094, 1286, 1313
Alw21I GWGCWC 3 cut(s) 117, 281, 511
Alw44I GTGCAC 1 cut(s) 507
AlwI GGATC 2 cut(s) 230, 1263
AlwNI CAGNNNCTG 1 cut(s) 166
AoxI GGCC 2 cut(s) 341, 1021
ApaLI GTGCAC 1 cut(s) 507
ApeKI GCWGC 3 cut(s) 517, 794, 912
ApoI RAATTY 4 cut(s) 386, 572, 582, 1124
AspS9I GGNCC 5 cut(s) 263, 270, 315, 342, 1221
AsuC2I CCSGG 7 cut(s) 182, 236, 260, 274, 319, 347, 1049
AsuHPI GGTGA 1 cut(s) 181
AvaII GGWCC 4 cut(s) 263, 270, 315, 1221
AxyI CCTNAGG 1 cut(s) 729
BaeGI GKGCMC 1 cut(s) 511
BanII GRGCYC 3 cut(s) 117, 138, 281
BauI CACGAG 1 cut(s) 774
Bbv12I GWGCWC 3 cut(s) 117, 281, 511
BbvI GCAGC 3 cut(s) 504, 806, 924
BccI CCATC 2 cut(s) 318, 657
BceAI ACGGC 1 cut(s) 1008
BcgI CGANNNNNNTGC 2 cut(s) 905, 939
BciVI GTATCC 2 cut(s) 436, 1294
BcnI CCSGG 7 cut(s) 182, 236, 260, 274, 319, 347, 1049
BcuI ACTAGT 1 cut(s) 695
BfaI CTAG 2 cut(s) 696, 903
BfmI CTRYAG 1 cut(s) 1323
BfuI GTATCC 2 cut(s) 436, 1294
BisI GCNGC 8 cut(s) 206, 256, 292, 295, 518, 766, 795, 913
BlsI GCNGC 8 cut(s) 207, 257, 293, 296, 519, 767, 796, 914
BmcAI AGTACT 1 cut(s) 598
Bme1390I CCNGG 7 cut(s) 182, 236, 260, 274, 319, 347, 1049
Bme18I GGWCC 4 cut(s) 263, 270, 315, 1221
BmgT120I GGNCC 5 cut(s) 263, 270, 315, 342, 1221
BmiI GGNNCC 4 cut(s) 264, 272, 344, 1222
BmrFI CCNGG 7 cut(s) 182, 236, 260, 274, 319, 347, 1049
BmrI ACTGGG 1 cut(s) 14
BmsI GCATC 3 cut(s) 203, 834, 1230
BmuI ACTGGG 1 cut(s) 14
BoxI GACNNNNGTC 1 cut(s) 268
BpmI CTGGAG 1 cut(s) 528
BpuEI CTTGAG 1 cut(s) 1185
BpuMI CCSGG 7 cut(s) 182, 236, 260, 274, 319, 347, 1049
BsaAI YACGTR 1 cut(s) 1031
BsaBI GATNNNNATC 1 cut(s) 328
BsaHI GRCGYC 1 cut(s) 297
BsaJI CCNNGG 7 cut(s) 259, 266, 318, 345, 489, 994, 1224
BsaXI ACNNNNNCTCC 6 cut(s) 181, 211, 519, 549, 1078, 1108
Bsc4I CCNNNNNNNGG 5 cut(s) 162, 241, 324, 353, 1104
Bse1I ACTGG 1 cut(s) 20
Bse21I CCTNAGG 1 cut(s) 729
Bse8I GATNNNNATC 1 cut(s) 328
BseDI CCNNGG 7 cut(s) 259, 266, 318, 345, 489, 994, 1224
BseGI GGATG 4 cut(s) 329, 703, 1245, 1273
BseJI GATNNNNATC 1 cut(s) 328
BseLI CCNNNNNNNGG 5 cut(s) 162, 241, 324, 353, 1104
BseMII CTCAG 3 cut(s) 702, 873, 1235
BseNI ACTGG 1 cut(s) 20
BseRI GAGGAG 2 cut(s) 125, 189
BseSI GKGCMC 1 cut(s) 511
BseXI GCAGC 3 cut(s) 504, 806, 924
Bsh1285I CGRYCG 1 cut(s) 156
BshFI GGCC 2 cut(s) 343, 1023
BsiEI CGRYCG 1 cut(s) 156
BsiHKAI GWGCWC 3 cut(s) 117, 281, 511
BsiSI CCGG 7 cut(s) 181, 236, 259, 274, 318, 347, 1049
BslFI GGGAC 3 cut(s) 256, 276, 1234
BslI CCNNNNNNNGG 5 cut(s) 162, 241, 324, 353, 1104
BsmFI GGGAC 3 cut(s) 256, 276, 1234
BsmI GAATGC 1 cut(s) 928
BsnI GGCC 2 cut(s) 343, 1023
Bsp1286I GDGCHC 4 cut(s) 117, 138, 281, 511
Bsp143I GATC 3 cut(s) 222, 420, 1255
BspACI CCGC 9 cut(s) 192, 203, 206, 256, 291, 294, 379, 644, 766
BspANI GGCC 2 cut(s) 343, 1023
BspCNI CTCAG 3 cut(s) 703, 874, 1236
BspLI GGNNCC 4 cut(s) 264, 272, 344, 1222
BspPI GGATC 2 cut(s) 230, 1263
BspQI GCTCTTC 1 cut(s) 245
BsrBI CCGCTC 1 cut(s) 208
BsrI ACTGG 1 cut(s) 20
BssECI CCNNGG 7 cut(s) 259, 266, 318, 345, 489, 994, 1224
BssMI GATC 3 cut(s) 222, 420, 1255
BssNAI GTATAC 1 cut(s) 540
BssNI GRCGYC 1 cut(s) 297
BssSI CACGAG 1 cut(s) 774
Bst1107I GTATAC 1 cut(s) 540
Bst2BI CACGAG 1 cut(s) 774
Bst4CI ACNGT 6 cut(s) 144, 285, 373, 416, 750, 790
Bst6I CTCTTC 3 cut(s) 245, 801, 939
BstACI GRCGYC 1 cut(s) 297
BstBAI YACGTR 1 cut(s) 1031
BstC8I GCNNGC 1 cut(s) 210
BstDEI CTNAG 5 cut(s) 711, 729, 856, 882, 1244
BstDSI CCRYGG 1 cut(s) 994
BstF5I GGATG 4 cut(s) 329, 703, 1245, 1273
BstKTI GATC 3 cut(s) 225, 423, 1258
BstMBI GATC 3 cut(s) 222, 420, 1255
BstMCI CGRYCG 1 cut(s) 156
BstMWI GCNNNNNNNGC 3 cut(s) 214, 340, 762
BstPAI GACNNNNGTC 1 cut(s) 268
BstSCI CCNGG 7 cut(s) 180, 234, 258, 272, 317, 345, 1047
BstSFI CTRYAG 1 cut(s) 1323
BstSLI GKGCMC 1 cut(s) 511
BstV1I GCAGC 3 cut(s) 504, 806, 924
BstZ17I GTATAC 1 cut(s) 540
Bsu36I CCTNAGG 1 cut(s) 729
BsuI GTATCC 2 cut(s) 436, 1294
BsuRI GGCC 2 cut(s) 343, 1023
BtgI CCRYGG 1 cut(s) 994
BtgZI GCGATG 1 cut(s) 676
BtsCI GGATG 4 cut(s) 329, 703, 1245, 1273
BtsI GCAGTG 1 cut(s) 167
BtsIMutI CAGTG 2 cut(s) 167, 879
Cac8I GCNNGC 1 cut(s) 210
CaiI CAGNNNCTG 1 cut(s) 166
Cfr13I GGNCC 5 cut(s) 263, 270, 315, 342, 1221
CseI GACGC 1 cut(s) 286
Csp6I GTAC 4 cut(s) 456, 597, 1032, 1073
CviAII CATG 7 cut(s) 8, 524, 719, 827, 1117, 1121, 1172
CviQI GTAC 4 cut(s) 456, 597, 1032, 1073
DdeI CTNAG 5 cut(s) 711, 729, 856, 882, 1244
DpnI GATC 3 cut(s) 224, 422, 1257
DpnII GATC 3 cut(s) 222, 420, 1255
DraI TTTAAA 1 cut(s) 657
EaeI YGGCCR 1 cut(s) 1021
Eam1104I CTCTTC 3 cut(s) 245, 801, 939
EarI CTCTTC 3 cut(s) 245, 801, 939
EciI GGCGGA 1 cut(s) 192
Ecl136II GAGCTC 2 cut(s) 115, 279
Eco24I GRGCYC 3 cut(s) 117, 138, 281
Eco47I GGWCC 4 cut(s) 263, 270, 315, 1221
Eco53kI GAGCTC 2 cut(s) 115, 279
Eco57I CTGAAG 3 cut(s) 194, 1302, 1329
Eco81I CCTNAGG 1 cut(s) 729
EcoICRI GAGCTC 2 cut(s) 115, 279
EcoO109I RGGNCCY 2 cut(s) 270, 1221
EcoRI GAATTC 1 cut(s) 582
EcoT22I ATGCAT 1 cut(s) 1122
EcoT38I GRGCYC 3 cut(s) 117, 138, 281
FaeI CATG 7 cut(s) 11, 527, 722, 830, 1120, 1124, 1175
FaqI GGGAC 3 cut(s) 256, 276, 1234
FatI CATG 7 cut(s) 7, 523, 718, 826, 1116, 1120, 1171
FauNDI CATATG 1 cut(s) 513
FblI GTMKAC 1 cut(s) 539
Fnu4HI GCNGC 8 cut(s) 206, 256, 292, 295, 518, 766, 795, 913
FokI GGATG 4 cut(s) 336, 690, 1252, 1280
FriOI GRGCYC 3 cut(s) 117, 138, 281
Fsp4HI GCNGC 8 cut(s) 206, 256, 292, 295, 518, 766, 795, 913
FspBI CTAG 2 cut(s) 696, 903
GluI GCNGC 8 cut(s) 206, 256, 292, 295, 518, 766, 795, 913
GsuI CTGGAG 1 cut(s) 528
HaeIII GGCC 2 cut(s) 343, 1023
HapII CCGG 7 cut(s) 181, 236, 259, 274, 318, 347, 1049
HgaI GACGC 1 cut(s) 286
Hin1I GRCGYC 1 cut(s) 297
Hin1II CATG 7 cut(s) 11, 527, 722, 830, 1120, 1124, 1175
HincII GTYRAC 2 cut(s) 813, 1339
HindII GTYRAC 2 cut(s) 813, 1339
HindIII AAGCTT 2 cut(s) 1284, 1311
HinfI GANTC 8 cut(s) 329, 485, 637, 715, 734, 1038, 1198, 1331
HpaI GTTAAC 1 cut(s) 813
HpaII CCGG 7 cut(s) 181, 236, 259, 274, 318, 347, 1049
HphI GGTGA 1 cut(s) 181
Hpy166II GTNNAC 6 cut(s) 509, 540, 813, 1028, 1169, 1339
Hpy188I TCNGA 6 cut(s) 312, 490, 567, 1150, 1228, 1260
Hpy188III TCNNGA 4 cut(s) 68, 247, 545, 776
Hpy8I GTNNAC 6 cut(s) 509, 540, 813, 1028, 1169, 1339
Hpy99I CGWCG 1 cut(s) 154
HpyAV CCTTC 4 cut(s) 67, 93, 235, 1098
HpyCH4III ACNGT 6 cut(s) 144, 285, 373, 416, 750, 790
HpyCH4IV ACGT 3 cut(s) 302, 1030, 1230
HpyCH4V TGCA 6 cut(s) 79, 509, 520, 794, 824, 1120
HpyF10VI GCNNNNNNNGC 3 cut(s) 214, 340, 762
HpyF3I CTNAG 5 cut(s) 711, 729, 856, 882, 1244
HpySE526I ACGT 3 cut(s) 302, 1030, 1230
Hsp92I GRCGYC 1 cut(s) 297
Hsp92II CATG 7 cut(s) 11, 527, 722, 830, 1120, 1124, 1175
KspAI GTTAAC 1 cut(s) 813
Kzo9I GATC 3 cut(s) 222, 420, 1255
LguI GCTCTTC 1 cut(s) 245
LmnI GCTCC 5 cut(s) 112, 183, 276, 527, 1099
Lsp1109I GCAGC 3 cut(s) 504, 806, 924
LweI GCATC 3 cut(s) 203, 834, 1230
MaeI CTAG 2 cut(s) 696, 903
MaeII ACGT 3 cut(s) 302, 1030, 1230
MaeIII GTNAC 1 cut(s) 298
MalI GATC 3 cut(s) 224, 422, 1257
MbiI CCGCTC 1 cut(s) 208
MboI GATC 3 cut(s) 222, 420, 1255
MboII GAAGA 7 cut(s) 262, 634, 643, 646, 818, 956, 1340
MfeI CAATTG 2 cut(s) 59, 1017
MhlI GDGCHC 4 cut(s) 117, 138, 281, 511
MlyI GAGTC 2 cut(s) 743, 1192
Mph1103I ATGCAT 1 cut(s) 1122
MseI TTAA 6 cut(s) 437, 656, 785, 812, 863, 1002
MslI CAYNNNNRTG 1 cut(s) 829
MspI CCGG 7 cut(s) 181, 236, 259, 274, 318, 347, 1049
MspR9I CCNGG 7 cut(s) 182, 236, 260, 274, 319, 347, 1049
MunI CAATTG 2 cut(s) 59, 1017
Mva1269I GAATGC 1 cut(s) 928
MwoI GCNNNNNNNGC 3 cut(s) 214, 340, 762
NciI CCSGG 7 cut(s) 182, 236, 260, 274, 319, 347, 1049
NdeI CATATG 1 cut(s) 513
NdeII GATC 3 cut(s) 222, 420, 1255
NlaIII CATG 7 cut(s) 11, 527, 722, 830, 1120, 1124, 1175
NlaIV GGNNCC 4 cut(s) 264, 272, 344, 1222
NmuCI GTSAC 1 cut(s) 298
NsiI ATGCAT 1 cut(s) 1122
PciSI GCTCTTC 1 cut(s) 245
PctI GAATGC 1 cut(s) 928
PfeI GAWTC 6 cut(s) 329, 485, 637, 715, 1038, 1331
PfoI TCCNGGA 2 cut(s) 234, 272
PkrI GCNGC 8 cut(s) 207, 257, 293, 296, 519, 767, 796, 914
PleI GAGTC 2 cut(s) 742, 1192
PpsI GAGTC 2 cut(s) 742, 1192
Ppu21I YACGTR 1 cut(s) 1031
PpuMI RGGWCCY 2 cut(s) 270, 1221
PshAI GACNNNNGTC 1 cut(s) 268
Psp124BI GAGCTC 2 cut(s) 117, 281
Psp5II RGGWCCY 2 cut(s) 270, 1221
PspN4I GGNNCC 4 cut(s) 264, 272, 344, 1222
PspPI GGNCC 5 cut(s) 263, 270, 315, 342, 1221
PspPPI RGGWCCY 2 cut(s) 270, 1221
PstNI CAGNNNCTG 1 cut(s) 166
RsaI GTAC 4 cut(s) 457, 598, 1033, 1074
RsaNI GTAC 4 cut(s) 456, 597, 1032, 1073
RseI CAYNNNNRTG 1 cut(s) 829
SacI GAGCTC 2 cut(s) 117, 281
SapI GCTCTTC 1 cut(s) 245
SaqAI TTAA 6 cut(s) 437, 656, 785, 812, 863, 1002
SatI GCNGC 8 cut(s) 206, 256, 292, 295, 518, 766, 795, 913
Sau3AI GATC 3 cut(s) 222, 420, 1255
Sau96I GGNCC 5 cut(s) 263, 270, 315, 342, 1221
ScaI AGTACT 1 cut(s) 598
SchI GAGTC 2 cut(s) 743, 1192
ScrFI CCNGG 7 cut(s) 182, 236, 260, 274, 319, 347, 1049
SduI GDGCHC 4 cut(s) 117, 138, 281, 511
SfaNI GCATC 3 cut(s) 203, 834, 1230
SfcI CTRYAG 1 cut(s) 1323
SinI GGWCC 4 cut(s) 263, 270, 315, 1221
SmiMI CAYNNNNRTG 1 cut(s) 829
SmlI CTYRAG 1 cut(s) 1200
SmoI CTYRAG 1 cut(s) 1200
SpeI ACTAGT 1 cut(s) 695
SsiI CCGC 9 cut(s) 192, 203, 206, 256, 291, 294, 379, 644, 766
SspMI CTAG 2 cut(s) 696, 903
SstI GAGCTC 2 cut(s) 117, 281
StyD4I CCNGG 7 cut(s) 180, 234, 258, 272, 317, 345, 1047
TaaI ACNGT 6 cut(s) 144, 285, 373, 416, 750, 790
TaiI ACGT 3 cut(s) 305, 1033, 1233
TaqI TCGA 3 cut(s) 149, 419, 737
TaqII GACCGA 2 cut(s) 170, 280
TatI WGTACW 1 cut(s) 596
TauI GCSGC 5 cut(s) 208, 258, 294, 297, 768
TfiI GAWTC 6 cut(s) 329, 485, 637, 715, 1038, 1331
Tru1I TTAA 6 cut(s) 437, 656, 785, 812, 863, 1002
Tru9I TTAA 6 cut(s) 437, 656, 785, 812, 863, 1002
TscAI CASTG 2 cut(s) 167, 886
TseFI GTSAC 1 cut(s) 298
TseI GCWGC 3 cut(s) 517, 794, 912
Tsp45I GTSAC 1 cut(s) 298
TspDTI ATGAA 5 cut(s) 575, 707, 819, 843, 1137
TspGWI ACGGA 1 cut(s) 983
TspRI CASTG 2 cut(s) 167, 886
VneI GTGCAC 1 cut(s) 507
VpaK11BI GGWCC 4 cut(s) 263, 270, 315, 1221
XapI RAATTY 4 cut(s) 386, 572, 582, 1124
XmiI GTMKAC 1 cut(s) 539
XspI CTAG 2 cut(s) 696, 903
ZrmI AGTACT 1 cut(s) 598
Zsp2I ATGCAT 1 cut(s) 1122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.