Rw1G036490

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000325
Physical Location & Seq
Forward (+)
64423758 .. 64426944
3187 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G036490.1

Sequence Viewer

Length: 2346 bp
ATGGAAAGGGGGGAAGGCGATTTTATTAGTATTGTTGAGGAAAGCATAGATTTTGGAGTTGAAACAAACGATAGTTTGGACTTGAATTTGGTGGGTTTCAATGTTCGGAAAGATTGGGTGAATAGGAGTAAGGTACATGGTCAGGGTTATCGGCGGAGGGATAAAAGGGATGTTACTGTAAAGAAACATCGAAAGGAAACTAGAACTGGTTGTCTGGCGCATATGGTCATTACTCGTCAACCTGATGGTAAATATCGGGTTTCACATATTGAAGAACAACACAATCATGACAATGTAAACGCAAGTATGGCTCAAGTATTACCACTGCACAGGGAATCCAGTATTTCCCAAGCTGCTGATGCTGAACTGGTAGAAGGTACCAAAGATTTCAGAACACTGTCAAAATTGGCATCTGAATCGATGAATAGACGGTTTAGAGTAAGGGAATCTCTCAATAATGTTTCTATAGGTTATAACAATCATCTTCAATCTGAAAGGACCAGAGATATGAAGAAGGGAGAAGTTGGACGTTTGCTGCATTACTTTCAAAGGCAACATGTTGAAAACCCATCCTTTTTTTATGCATTACAGGTTGATACTGATGATAAAGTTTGTAACATCTTTTGGGCCGATGATAAGATGGTATCAGATTATGTTTATTTTGGGGATTTGGTTTGTCTGGACACAATTTGCAGAGCAGACAAGAATTGTCTCCCATTTGTACAGTTTATAGGAGTAAACCATCACAAACAGGTGCTGATCTTTGCTGCCGCACTTTTGTATGATGACACCATGGAATCTTATAAGTGGCTATTTCAAACCTTCTTGGAAGCAATGTCAGGGAAGAAACCAAGGACCATTCTAACTGATCAAGATGCAACAATTGTTGAGGCAATCGATTCAGTCTTACCAGAAACAGACCATCGTATATGCACATGGCAAATGTACGAAAATGCTCTCAAACACATTAGCCCCATGAGATGTATATACGACCACAAAGATGAAGATGATTTTGTTTCTGCTTGGGGGGATATGCTAGATAAATATGGTCTTCAGCAGAATGACTGGTTAAAATGGATGTTTAGAGCACGAGAGAAATGGGCTGTGGTGAATGGTAGGAATACTATTTTTGTTGACAAAGGCACACATTTGGTCGAAAGTTTATTTAATGATCTGAGAAGTTACCTATACTCGGACACTACTGTGGTTCAATTCTTTAAGCATTTTGAAAGGGTCGTGGATGAGCAACGGTCCAAAGAAATAGAAGCTAGCGATGAAATGAATAGCTGTTTGCCAAGGCTAATGGGGAATGTGGTTATGTTAAAGCATGCAAGTACTGTATACACCTCAAGGGCATTTGAAGTATTTCAGCAAGGATATGAGAAGTGTTTAAATGTTGTTGTCAACCAATGTAGTGAGAATGGGTCATTGTTTGAGTACAGAGCTAAAACATTTGGGAAAACTCAAGAACACAGCATCATATTCTGTTCCTCTGATGTTACAGTTATATGCAGTTGTAAGAAATTTGAGAGTGTTGGGTTTCTATGTAGCCATGCCCTTAAAGTGCTGGATCACAGGAATATAAAGGTACTCCCCACCAAATATGTCTTGAAGAGATGGACAAAAGATGCAAGGTTAGGGATTGCAAGACCGAGTGATGTCTCCACCGTCAATGATAACCCTAAGCTTATTGTGGCTAGCCGTTACAAAGATCTTAGCCACAGAATTCTGATGTTGTCTACCAGGGCTTCTGAATCTGGGGAAGCATTTCAATACGCTGTTAGACAACTCGACCAAGTGATGGACGGGGTTGAGAAAATTTTGACATTAAAACCTGAGGATGCTCAAGCTGTCACGTCAAGCAGCACAGGTACAACTACTTCTGATAATGAGCATGCAGAAACTTTTCTAGATGAGAATGCTTTTGAGAATCAGGGTGAGAATGGAGTAGAAGGAGCAAACGAACAAGGGAGTGCTGTCCTCGACAGAGGTGAATTAATGAATGTAAATGGAAACTTCTCTAGCACAAACAGAATTCAGATTTCAGATGCATCCCCGCAAAGTAATCATTCCTACATTTCTTCGGAACCCTTAACCGGAAATCCCATTACACAGGGTTTGTACACTTTTGAAGAGAACCCTGTAGTCAATTGCACGTACGCGCAAGATAATGCCATCTTATTTCGACCTCCAAACATCTTTCCTAACCAACACGATTCACCTTCTCAGTTGCAATTGCTTCAGGAACCTCTTATCAACGGCACATACCAAGAACCCATATCTGAACTGAGGCAGGCAATGGACCTCGATCTCCACCCTCCACATTCACCTTCATTTTTGTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

781

Amino Acids

89.29

Weight (kDa)

5.69

Isoelectric Point (pI)

38.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 48 - 97 4.8e-10 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 193 - 306 4.7e-07 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 225 - 318 3.4e-23 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000325)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g24391 FvH4_2g38071 FvH4_3g07131 FvH4_3g22481 FvH4_4g15809 FvH4_5g37230 FvH4_7g25201 FvH4_7g29092 FvH4_7g29093
malus_domestica MD01G1197600.v1.1 MD17G1186900.v1.1
prunus_persica Prupe.1G227400_v2.0.a1 Prupe.2G291000_v2.0.a1 Prupe.4G268600_v2.0.a1 Prupe.5G094100_v2.0.a1
pyrus_communis pycom01g20780 pycom17g19620
rosa_chinensis RchiOBHm_Chr1g0376821 RchiOBHm_Chr5g0061941 RchiOBHm_Chr5g0078991 RchiOBHm_Chr6g0276821 RchiOBHm_Chr7g0191321
rosa_laevigata RLG00000007883 RLG00000008804 RLG00000010632 RLG00000026567 RLG00000035244 RLG00000036018 RLG00000036909
rosa_multiflora Rmu_sc0001036.1_g000026 Rmu_sc0001556.1_g000021 Rmu_sc0001974.1_g000022 Rmu_sc0002113.1_g000006 Rmu_sc0002572.1_g000008 Rmu_sc0004808.1_g000011 Rmu_sc0005117.1_g000017 Rmu_sc0005319.1_g000016 Rmu_sc0008432.1_g000005 Rmu_sc0010475.1_g000001 Rmu_sc0015522.1_g000003 Rmu_ssc0000066.1_g000009 Rmu_ssc0000400.1_g000102 Rmu_ssc0000400.1_g000103
rosa_roxburghii Rroxscaffold_1G00071290 Rroxscaffold_2G00141280 Rroxscaffold_3G00233790 Rroxscaffold_4G00297530 Rroxscaffold_5G00368860 Rroxscaffold_5G00386220 Rroxscaffold_7G00159400
rosa_rugosa Rorug01G0146800.1 Rorug01G0162100.1 Rorug01G0162200.1 Rorug01G0398600 Rorug01G0398700 Rorug02G0344200 Rorug02G0344300 Rorug02G0344400 Rorug03G0046200 Rorug03G0153200 Rorug04G0182500 Rorug04G0182600 Rorug05G0257700 Rorug05G0386400 Rorug05G0386400 Rorug05G0386500 Rorug05G0460900.1 Rorug05G0467000 Rorug07G0110400
rosa_samantha Rh1AG183500 Rh1AG416000 Rh1BG023600 Rh1BG145400 Rh1BG145500 Rh1BG278800 Rh1BG375400 Rh1CG389200 Rh1DG166300 Rh1DG176900 Rh1DG309900 Rh1DG406000 Rh2BG439100 Rh2BG502200 Rh2CG314800 Rh2CG517400 Rh2CG532000 Rh2DG449100 Rh3BG109900 Rh3CG230400 Rh3CG246600 Rh3CG289400 Rh3CG289500 Rh3DG120600 Rh4AG144400 Rh4AG408200 Rh4BG419300 Rh4CG101900 Rh4CG151000 Rh4CG226900 Rh4DG235400 Rh5AG265900 Rh5AG375200 Rh5CG559600 Rh5DG218200 Rh6AG074500 Rh6BG291800 Rh6CG292800 Rh6DG284900
rosa_wichuraiana Rw0G013240 Rw1G036490 Rw5G024920 Rw5G030730 Rw5G033710 Rw6G033840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 474, 804
Acc65I GGTACC 1 cut(s) 377
AccB1I GGYRCC 1 cut(s) 377
AccB7I CCANNNNNTGG 1 cut(s) 1801
AccI GTMKAC 2 cut(s) 1341, 1739
AccII CGCG 1 cut(s) 2162
AciI CCGC 3 cut(s) 154, 771, 2057
AclWI GGATC 1 cut(s) 1578
AcsI RAATTY 5 cut(s) 85, 1523, 1725, 1818, 2034
AcuI CTGAAG 2 cut(s) 1037, 2225
AfiI CCNNNNNNNGG 3 cut(s) 1192, 1801, 2096
AflIII ACRYGT 1 cut(s) 556
AjiI CACGTC 1 cut(s) 1857
AjnI CCWGG 1 cut(s) 1742
AleI CACNNNNGTG 1 cut(s) 1202
AluBI AGCT 6 cut(s) 353, 1268, 1287, 1445, 1687, 1850
AluI AGCT 6 cut(s) 353, 1268, 1287, 1445, 1687, 1850
Alw21I GWGCWC 1 cut(s) 1090
Alw26I GTCTC 2 cut(s) 716, 1666
AlwI GGATC 1 cut(s) 1578
AlwNI CAGNNNCTG 1 cut(s) 757
AoxI GGCC 1 cut(s) 627
ApeKI GCWGC 4 cut(s) 353, 535, 767, 1863
ApoI RAATTY 5 cut(s) 85, 1523, 1725, 1818, 2034
AseI ATTAAT 1 cut(s) 1997
Asp700I GAANNNNTTC 3 cut(s) 1365, 1767, 1905
Asp718I GGTACC 1 cut(s) 377
AspLEI GCGC 2 cut(s) 220, 2164
AspS9I GGNCC 5 cut(s) 498, 627, 855, 1251, 2302
AsuHPI GGTGA 6 cut(s) 130, 1120, 1949, 2003, 2211, 2319
AsuNHI GCTAGC 2 cut(s) 1268, 1697
AvaII GGWCC 4 cut(s) 498, 855, 1251, 2302
AxyI CCTNAGG 1 cut(s) 1836
BanI GGYRCC 1 cut(s) 377
BarI GAAGNNNNNNTAC 2 cut(s) 1864, 1896
BauI CACGAG 1 cut(s) 1089
BbsI GAAGAC 1 cut(s) 1043
Bbv12I GWGCWC 1 cut(s) 1090
BbvI GCAGC 4 cut(s) 340, 522, 754, 1875
BccI CCATC 8 cut(s) 239, 577, 634, 750, 930, 1611, 1795, 2183
BceAI ACGGC 2 cut(s) 1686, 2275
BcgI CGANNNNNNTGC 2 cut(s) 399, 433
BciT130I CCWGG 1 cut(s) 1744
BclI TGATCA 1 cut(s) 868
BcoDI GTCTC 2 cut(s) 716, 1666
BfaI CTAG 6 cut(s) 201, 1037, 1269, 1698, 1910, 2022
BfmI CTRYAG 2 cut(s) 465, 2142
BglII AGATCT 1 cut(s) 1711
BisI GCNGC 5 cut(s) 354, 536, 768, 771, 1864
BlsI GCNGC 5 cut(s) 355, 537, 769, 772, 1865
BmcAI AGTACT 1 cut(s) 1336
Bme1390I CCNGG 1 cut(s) 1744
Bme18I GGWCC 4 cut(s) 498, 855, 1251, 2302
BmgBI CACGTC 1 cut(s) 1857
BmgT120I GGNCC 5 cut(s) 498, 627, 855, 1251, 2302
BmiI GGNNCC 3 cut(s) 379, 2088, 2247
BmrFI CCNGG 1 cut(s) 1744
BmsI GCATC 8 cut(s) 349, 419, 865, 1485, 1618, 1831, 2038, 2060
BmtI GCTAGC 2 cut(s) 1272, 1701
BpiI GAAGAC 1 cut(s) 1043
Bpu10I CCTNAGC 1 cut(s) 1683
BpuEI CTTGAG 4 cut(s) 297, 1333, 1449, 1830
Bsa29I ATCGAT 2 cut(s) 419, 897
BsaAI YACGTR 1 cut(s) 2157
BsaJI CCNNGG 4 cut(s) 792, 851, 1295, 1743
BsaWI WCCGGW 1 cut(s) 2096
Bsc4I CCNNNNNNNGG 3 cut(s) 1192, 1801, 2096
Bse1I ACTGG 4 cut(s) 211, 339, 372, 1070
Bse21I CCTNAGG 1 cut(s) 1836
Bse3DI GCAATG 2 cut(s) 840, 2304
BseBI CCWGG 1 cut(s) 1744
BseCI ATCGAT 2 cut(s) 419, 897
BseDI CCNNGG 4 cut(s) 792, 851, 1295, 1743
BseGI GGATG 6 cut(s) 175, 569, 1083, 1246, 1846, 2051
BseLI CCNNNNNNNGG 3 cut(s) 1192, 1801, 2096
BseMI GCAATG 2 cut(s) 840, 2304
BseMII CTCAG 4 cut(s) 1166, 1827, 2240, 2279
BseNI ACTGG 4 cut(s) 211, 339, 372, 1070
BseXI GCAGC 4 cut(s) 340, 522, 754, 1875
BsgI GTGCAG 1 cut(s) 311
Bsh1236I CGCG 1 cut(s) 2162
BshFI GGCC 1 cut(s) 629
BshNI GGYRCC 1 cut(s) 377
BshVI ATCGAT 2 cut(s) 419, 897
BsiHKAI GWGCWC 1 cut(s) 1090
BsiSI CCGG 1 cut(s) 2097
BsiWI CGTACG 1 cut(s) 2157
BslI CCNNNNNNNGG 3 cut(s) 1192, 1801, 2096
BsmAI GTCTC 2 cut(s) 716, 1666
BsmI GAATGC 1 cut(s) 1924
BsnI GGCC 1 cut(s) 629
Bsp1286I GDGCHC 1 cut(s) 1090
Bsp1407I TGTACA 2 cut(s) 721, 2121
Bsp143I GATC 6 cut(s) 759, 868, 1171, 1570, 1711, 2308
Bsp19I CCATGG 1 cut(s) 792
BspACI CCGC 3 cut(s) 154, 771, 2057
BspANI GGCC 1 cut(s) 629
BspCNI CTCAG 4 cut(s) 1167, 1828, 2239, 2280
BspDI ATCGAT 2 cut(s) 419, 897
BspFNI CGCG 1 cut(s) 2162
BspHI TCATGA 1 cut(s) 286
BspLI GGNNCC 3 cut(s) 379, 2088, 2247
BspOI GCTAGC 2 cut(s) 1272, 1701
BspPI GGATC 1 cut(s) 1578
BspT107I GGYRCC 1 cut(s) 377
BsrDI GCAATG 2 cut(s) 840, 2304
BsrGI TGTACA 2 cut(s) 721, 2121
BsrI ACTGG 4 cut(s) 211, 339, 372, 1070
BssECI CCNNGG 4 cut(s) 792, 851, 1295, 1743
BssMI GATC 6 cut(s) 759, 868, 1171, 1570, 1711, 2308
BssNAI GTATAC 1 cut(s) 1342
BssSI CACGAG 1 cut(s) 1089
BssT1I CCWWGG 3 cut(s) 792, 851, 1295
Bst1107I GTATAC 1 cut(s) 1342
Bst2BI CACGAG 1 cut(s) 1089
Bst2UI CCWGG 1 cut(s) 1744
Bst4CI ACNGT 9 cut(s) 178, 399, 432, 726, 1204, 1251, 1339, 1504, 1669
Bst6I CTCTTC 2 cut(s) 1607, 2127
BstAUI TGTACA 2 cut(s) 721, 2121
BstBAI YACGTR 1 cut(s) 2157
BstC8I GCNNGC 5 cut(s) 1270, 1329, 1699, 1896, 2295
BstDEI CTNAG 6 cut(s) 1175, 1683, 1715, 1836, 2226, 2288
BstDSI CCRYGG 1 cut(s) 792
BstF5I GGATG 6 cut(s) 175, 569, 1083, 1246, 1846, 2051
BstFNI CGCG 1 cut(s) 2162
BstHHI GCGC 2 cut(s) 220, 2164
BstKTI GATC 6 cut(s) 762, 871, 1174, 1573, 1714, 2311
BstMAI GTCTC 2 cut(s) 716, 1666
BstMBI GATC 6 cut(s) 759, 868, 1171, 1570, 1711, 2308
BstMWI GCNNNNNNNGC 2 cut(s) 308, 359
BstNI CCWGG 1 cut(s) 1744
BstNSI RCATGY 3 cut(s) 560, 1331, 1898
BstSCI CCNGG 1 cut(s) 1742
BstSFI CTRYAG 2 cut(s) 465, 2142
BstUI CGCG 1 cut(s) 2162
BstV1I GCAGC 4 cut(s) 340, 522, 754, 1875
BstV2I GAAGAC 1 cut(s) 1043
BstX2I RGATCY 1 cut(s) 1711
BstYI RGATCY 1 cut(s) 1711
BstZ17I GTATAC 1 cut(s) 1342
Bsu15I ATCGAT 2 cut(s) 419, 897
Bsu36I CCTNAGG 1 cut(s) 1836
BsuRI GGCC 1 cut(s) 629
BsuTUI ATCGAT 2 cut(s) 419, 897
BtgI CCRYGG 1 cut(s) 792
BtgZI GCGATG 1 cut(s) 1287
BtrI CACGTC 1 cut(s) 1857
BtsCI GGATG 6 cut(s) 175, 569, 1083, 1246, 1846, 2051
BtsI GCAGTG 1 cut(s) 323
BtsIMutI CAGTG 2 cut(s) 323, 395
Cac8I GCNNGC 5 cut(s) 1270, 1329, 1699, 1896, 2295
CaiI CAGNNNCTG 1 cut(s) 757
CciI TCATGA 1 cut(s) 286
CfoI GCGC 2 cut(s) 220, 2164
Cfr13I GGNCC 5 cut(s) 498, 627, 855, 1251, 2302
ClaI ATCGAT 2 cut(s) 419, 897
CviAII CATG 9 cut(s) 137, 287, 557, 793, 936, 976, 1328, 1553, 1895
DdeI CTNAG 6 cut(s) 1175, 1683, 1715, 1836, 2226, 2288
DpnI GATC 6 cut(s) 761, 870, 1173, 1572, 1713, 2310
DpnII GATC 6 cut(s) 759, 868, 1171, 1570, 1711, 2308
DraI TTTAAA 1 cut(s) 1392
Eam1104I CTCTTC 2 cut(s) 1607, 2127
EarI CTCTTC 2 cut(s) 1607, 2127
EciI GGCGGA 1 cut(s) 169
Eco130I CCWWGG 3 cut(s) 792, 851, 1295
Eco47I GGWCC 4 cut(s) 498, 855, 1251, 2302
Eco57I CTGAAG 2 cut(s) 1037, 2225
Eco81I CCTNAGG 1 cut(s) 1836
EcoRI GAATTC 2 cut(s) 1725, 2034
EcoRII CCWGG 1 cut(s) 1742
EcoT14I CCWWGG 3 cut(s) 792, 851, 1295
EcoT22I ATGCAT 2 cut(s) 586, 2053
ErhI CCWWGG 3 cut(s) 792, 851, 1295
FaeI CATG 9 cut(s) 140, 290, 560, 796, 939, 979, 1331, 1556, 1898
FatI CATG 9 cut(s) 136, 286, 556, 792, 935, 975, 1327, 1552, 1894
FauI CCCGC 1 cut(s) 2064
FauNDI CATATG 1 cut(s) 222
FbaI TGATCA 1 cut(s) 868
FblI GTMKAC 2 cut(s) 1341, 1739
Fnu4HI GCNGC 5 cut(s) 354, 536, 768, 771, 1864
FokI GGATG 6 cut(s) 182, 556, 1090, 1253, 1853, 2038
Fsp4HI GCNGC 5 cut(s) 354, 536, 768, 771, 1864
FspBI CTAG 6 cut(s) 201, 1037, 1269, 1698, 1910, 2022
GlaI GCGC 2 cut(s) 219, 2163
GluI GCNGC 5 cut(s) 354, 536, 768, 771, 1864
HaeIII GGCC 1 cut(s) 629
HapII CCGG 1 cut(s) 2097
HhaI GCGC 2 cut(s) 220, 2164
Hin1II CATG 9 cut(s) 140, 290, 560, 796, 939, 979, 1331, 1556, 1898
Hin6I GCGC 2 cut(s) 218, 2162
HinP1I GCGC 2 cut(s) 218, 2162
HincII GTYRAC 3 cut(s) 239, 1135, 1405
HindII GTYRAC 3 cut(s) 239, 1135, 1405
HindIII AAGCTT 1 cut(s) 1685
HinfI GANTC 8 cut(s) 335, 416, 446, 797, 899, 1754, 1930, 2216
HpaII CCGG 1 cut(s) 2097
HphI GGTGA 6 cut(s) 130, 1120, 1949, 2003, 2211, 2319
Hpy166II GTNNAC 8 cut(s) 239, 298, 739, 1135, 1342, 1405, 1740, 2124
Hpy188III TCNNGA 7 cut(s) 287, 680, 872, 1466, 1609, 1910, 2243
Hpy8I GTNNAC 8 cut(s) 239, 298, 739, 1135, 1342, 1405, 1740, 2124
HpyAV CCTTC 7 cut(s) 8, 368, 508, 832, 1946, 2232, 2340
HpyCH4III ACNGT 9 cut(s) 178, 399, 432, 726, 1204, 1251, 1339, 1504, 1669
HpyCH4IV ACGT 3 cut(s) 529, 1856, 2156
HpyF10VI GCNNNNNNNGC 2 cut(s) 308, 359
HpyF3I CTNAG 6 cut(s) 1175, 1683, 1715, 1836, 2226, 2288
HpySE526I ACGT 3 cut(s) 529, 1856, 2156
Hsp92II CATG 9 cut(s) 140, 290, 560, 796, 939, 979, 1331, 1556, 1898
HspAI GCGC 2 cut(s) 218, 2162
KpnI GGTACC 1 cut(s) 381
Ksp22I TGATCA 1 cut(s) 868
Kzo9I GATC 6 cut(s) 759, 868, 1171, 1570, 1711, 2308
LmnI GCTCC 1 cut(s) 1955
Lsp1109I GCAGC 4 cut(s) 340, 522, 754, 1875
LweI GCATC 8 cut(s) 349, 419, 865, 1485, 1618, 1831, 2038, 2060
MaeI CTAG 6 cut(s) 201, 1037, 1269, 1698, 1910, 2022
MaeII ACGT 3 cut(s) 529, 1856, 2156
MaeIII GTNAC 6 cut(s) 172, 614, 1181, 1498, 1703, 1852
MalI GATC 6 cut(s) 761, 870, 1173, 1572, 1713, 2310
MboI GATC 6 cut(s) 759, 868, 1171, 1570, 1711, 2308
MboII GAAGA 9 cut(s) 284, 476, 523, 856, 1016, 1043, 1624, 2073, 2144
MfeI CAATTG 3 cut(s) 882, 2149, 2234
MflI RGATCY 1 cut(s) 1711
MhlI GDGCHC 1 cut(s) 1090
MmeI TCCRAC 1 cut(s) 505
Mph1103I ATGCAT 2 cut(s) 586, 2053
MroXI GAANNNNTTC 3 cut(s) 1365, 1767, 1905
MseI TTAA 9 cut(s) 1070, 1167, 1218, 1322, 1391, 1560, 1829, 1997, 2093
MslI CAYNNNNRTG 4 cut(s) 285, 291, 999, 1202
MspI CCGG 1 cut(s) 2097
MspR9I CCNGG 1 cut(s) 1744
MunI CAATTG 3 cut(s) 882, 2149, 2234
Mva1269I GAATGC 1 cut(s) 1924
MvaI CCWGG 1 cut(s) 1744
MvnI CGCG 1 cut(s) 2162
MwoI GCNNNNNNNGC 2 cut(s) 308, 359
NcoI CCATGG 1 cut(s) 792
NdeI CATATG 1 cut(s) 222
NdeII GATC 6 cut(s) 759, 868, 1171, 1570, 1711, 2308
NheI GCTAGC 2 cut(s) 1268, 1697
NlaIII CATG 9 cut(s) 140, 290, 560, 796, 939, 979, 1331, 1556, 1898
NlaIV GGNNCC 3 cut(s) 379, 2088, 2247
NmuCI GTSAC 1 cut(s) 1852
NsiI ATGCAT 2 cut(s) 586, 2053
NspI RCATGY 3 cut(s) 560, 1331, 1898
OliI CACNNNNGTG 1 cut(s) 1202
PaeI GCATGC 2 cut(s) 1331, 1898
PagI TCATGA 1 cut(s) 286
PciI ACATGT 1 cut(s) 556
PctI GAATGC 1 cut(s) 1924
PdmI GAANNNNTTC 3 cut(s) 1365, 1767, 1905
PfeI GAWTC 8 cut(s) 335, 416, 446, 797, 899, 1754, 1930, 2216
Pfl23II CGTACG 1 cut(s) 2157
PflMI CCANNNNNTGG 1 cut(s) 1801
PkrI GCNGC 5 cut(s) 355, 537, 769, 772, 1865
Ppu21I YACGTR 1 cut(s) 2157
PscI ACATGT 1 cut(s) 556
PshBI ATTAAT 1 cut(s) 1997
PsiI TTATAA 2 cut(s) 474, 804
Psp6I CCWGG 1 cut(s) 1742
PspGI CCWGG 1 cut(s) 1742
PspLI CGTACG 1 cut(s) 2157
PspN4I GGNNCC 3 cut(s) 379, 2088, 2247
PspPI GGNCC 5 cut(s) 498, 627, 855, 1251, 2302
PstNI CAGNNNCTG 1 cut(s) 757
PsuI RGATCY 1 cut(s) 1711
RseI CAYNNNNRTG 4 cut(s) 285, 291, 999, 1202
SaqAI TTAA 9 cut(s) 1070, 1167, 1218, 1322, 1391, 1560, 1829, 1997, 2093
SatI GCNGC 5 cut(s) 354, 536, 768, 771, 1864
Sau3AI GATC 6 cut(s) 759, 868, 1171, 1570, 1711, 2308
Sau96I GGNCC 5 cut(s) 498, 627, 855, 1251, 2302
ScaI AGTACT 1 cut(s) 1336
ScrFI CCNGG 1 cut(s) 1744
SduI GDGCHC 1 cut(s) 1090
SfaNI GCATC 8 cut(s) 349, 419, 865, 1485, 1618, 1831, 2038, 2060
SfcI CTRYAG 2 cut(s) 465, 2142
SinI GGWCC 4 cut(s) 498, 855, 1251, 2302
SmiMI CAYNNNNRTG 4 cut(s) 285, 291, 999, 1202
SmlI CTYRAG 4 cut(s) 312, 1348, 1464, 1845
SmoI CTYRAG 4 cut(s) 312, 1348, 1464, 1845
SphI GCATGC 2 cut(s) 1331, 1898
SsiI CCGC 3 cut(s) 154, 771, 2057
SspMI CTAG 6 cut(s) 201, 1037, 1269, 1698, 1910, 2022
StyD4I CCNGG 1 cut(s) 1742
StyI CCWWGG 3 cut(s) 792, 851, 1295
TaaI ACNGT 9 cut(s) 178, 399, 432, 726, 1204, 1251, 1339, 1504, 1669
TaiI ACGT 3 cut(s) 532, 1859, 2159
TaqI TCGA 8 cut(s) 190, 419, 897, 1155, 1791, 1983, 2185, 2307
TaqII GACCGA 1 cut(s) 1666
TatI WGTACW 4 cut(s) 721, 1334, 1437, 2121
TauI GCSGC 1 cut(s) 773
TfiI GAWTC 8 cut(s) 335, 416, 446, 797, 899, 1754, 1930, 2216
Tru1I TTAA 9 cut(s) 1070, 1167, 1218, 1322, 1391, 1560, 1829, 1997, 2093
Tru9I TTAA 9 cut(s) 1070, 1167, 1218, 1322, 1391, 1560, 1829, 1997, 2093
TscAI CASTG 2 cut(s) 330, 402
TseFI GTSAC 1 cut(s) 1852
TseI GCWGC 4 cut(s) 353, 535, 767, 1863
Tsp45I GTSAC 1 cut(s) 1852
TspDTI ATGAA 7 cut(s) 437, 524, 1017, 1290, 1295, 2015, 2322
TspRI CASTG 2 cut(s) 330, 402
Van91I CCANNNNNTGG 1 cut(s) 1801
VpaK11BI GGWCC 4 cut(s) 498, 855, 1251, 2302
VspI ATTAAT 1 cut(s) 1997
XapI RAATTY 5 cut(s) 85, 1523, 1725, 1818, 2034
XbaI TCTAGA 1 cut(s) 1909
XceI RCATGY 3 cut(s) 560, 1331, 1898
XmiI GTMKAC 2 cut(s) 1341, 1739
XmnI GAANNNNTTC 3 cut(s) 1365, 1767, 1905
XspI CTAG 6 cut(s) 201, 1037, 1269, 1698, 1910, 2022
ZrmI AGTACT 1 cut(s) 1336
Zsp2I ATGCAT 2 cut(s) 586, 2053
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.