Rorug03G0046200

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000325
Physical Location & Seq
Forward (+)
3558415 .. 3563684
5270 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0046200.1

Sequence Viewer

Length: 1605 bp
ATGACTCTCAGCAGTATTCCGTTGGCTACGTCGGATCTTCAAATCGGTCATGGAGCTCGAAGAAATTCGACACTAATCTGTGCGCCGGTAATGGGGGAATCAGTTGATCAGATGCTGCGTCAATTGCAACAGGCAAAGGAACTTGGTGCTGACCTTGTTGAGATTCGGTTGGACTACATTAAGAACTTCAGTCCAAGACAAGATCTCGAAACTTTGATTAAGCGCAGCCCTTTGCCAACACTCGTCACTTACAGGCCAAAATGGGAAGGTGGTGAGTATGAAGGAGATGAAAATAAGCGACAAGAGGCACTCATTTTAGCCCTGGAATTGGGAGCGGATTATATTGATGTTGAACTAAAGGTAGCAAATGACTTCTACAGTTCTATTCAAGGGAAGAAGCCAGAAAAGGTCAAAATCATAGTTTCTTCCCACAACTATGAGAATACTCCATCTGCTGAGGAAATTGGCAATCTTGTTGCAACGATACAAGCCACTGGAGCTGACATAGTCAAGGTCGCAACAACTGCCTTGGACATAACGGACAATGCAAGAATATTTCAAGTGCTAGCGCGTTCTCAAGTCCCAATGATAGGACTTTTGATGGGTGAGAAGGGTTTGATCTCTCGTGTACTTAGTGCAAAATATGGGTCATATGTCACATTTGGTACACTAGAGGCAGGTGAGGTATCAGCTCCTGGCCAGCCAACTGTAACGGATCTGTTGGAGTTATACAATTTTAGGCAGATTGGAGCCGATACCAAAGTACATGGTGTGATAGGAAATCCTATTGGTCACAGCAAAAGTCCTCATCTTTACAATGCAGCATTTAAAGCAAATAACTTCAATGGAATTTATTTGCCATTGCTGGTTGATAGCGTTGCAAACTTTATCAACACCTATAACTCCCCTGATTGGGTTGGATACAGTTACACAATTCCTCACAAAGAAGCTGGATTCAAATGTTGTGATGAGATCGATCCTAATGCCCTGGCAATAGGAGCTATTAGTTGCATGATCAGGAACCCAACTGATGGGAAGTTAAAGGGCTATAATGTTGACTATCTTGGAGCAATTGCAGCTATTGAGGAAGGACTTCGAGGATTAGGATTGAACGGTTCAAGTAATGGATCTGGTTCCCCATTAGCTGGTAGGTTATTTGTGGTCATGGGAGCTGGTGGTGCTGGAAAGGCACTTGCATATGGTGGAAAACAAAAGGGAGCAAGAGTTGTCGTTGCCAATCGCTCATTTGACAAAGCCAAGATACTTGCCGACAAAGTTGGAGGAGAAGCTATTACTCTTGCTGAGTTGGCAAACTTCCATCCAGAGGATGGTATGGTTCTTGTAAATACCACATCTGTTGGAATGAAACCAAGAACTGATCAAACACCCATCCCAAAGGAAGCTCTGAAGAACTACTGTTTGGTATTTGATGCCATTTATACACCTAAATGGACCAGACTCTTGACCGAAGCACAAGAGTCTGGAGCAGCTGTGGTTTTTGGGACAGAAATGTTCCTTAACCAAGCATTTGTACAGGTCGAAAAGTTTTCTGGTATACCTGCAAATAAGCAACTGATCAGGGATACATTGGCAAGAAACACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

534

Amino Acids

57.64

Weight (kDa)

6.07

Isoelectric Point (pI)

25.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DHquinase_I PF01487 27 - 244 7e-70 Type I 3-dehydroquinase
Shikimate_dh_N PF08501 258 - 336 1.1e-20 Shikimate dehydrogenase substrate binding domain
Shikimate_DH PF01488 383 - 452 3.8e-06 Shikimate / quinate 5-dehydrogenase
SDH_C PF18317 501 - 530 5.8e-06 Shikimate 5'-dehydrogenase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000325)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g24391 FvH4_2g38071 FvH4_3g07131 FvH4_3g22481 FvH4_4g15809 FvH4_5g37230 FvH4_7g25201 FvH4_7g29092 FvH4_7g29093
malus_domestica MD01G1197600.v1.1 MD17G1186900.v1.1
prunus_persica Prupe.1G227400_v2.0.a1 Prupe.2G291000_v2.0.a1 Prupe.4G268600_v2.0.a1 Prupe.5G094100_v2.0.a1
pyrus_communis pycom01g20780 pycom17g19620
rosa_chinensis RchiOBHm_Chr1g0376821 RchiOBHm_Chr5g0061941 RchiOBHm_Chr5g0078991 RchiOBHm_Chr6g0276821 RchiOBHm_Chr7g0191321
rosa_laevigata RLG00000007883 RLG00000008804 RLG00000010632 RLG00000026567 RLG00000035244 RLG00000036018 RLG00000036909
rosa_multiflora Rmu_sc0001036.1_g000026 Rmu_sc0001556.1_g000021 Rmu_sc0001974.1_g000022 Rmu_sc0002113.1_g000006 Rmu_sc0002572.1_g000008 Rmu_sc0004808.1_g000011 Rmu_sc0005117.1_g000017 Rmu_sc0005319.1_g000016 Rmu_sc0008432.1_g000005 Rmu_sc0010475.1_g000001 Rmu_sc0015522.1_g000003 Rmu_ssc0000066.1_g000009 Rmu_ssc0000400.1_g000102 Rmu_ssc0000400.1_g000103
rosa_roxburghii Rroxscaffold_1G00071290 Rroxscaffold_2G00141280 Rroxscaffold_3G00233790 Rroxscaffold_4G00297530 Rroxscaffold_5G00368860 Rroxscaffold_5G00386220 Rroxscaffold_7G00159400
rosa_rugosa Rorug01G0146800.1 Rorug01G0162100.1 Rorug01G0162200.1 Rorug01G0398600 Rorug01G0398700 Rorug02G0344200 Rorug02G0344300 Rorug02G0344400 Rorug03G0046200 Rorug03G0153200 Rorug04G0182500 Rorug04G0182600 Rorug05G0257700 Rorug05G0386400 Rorug05G0386400 Rorug05G0386500 Rorug05G0460900.1 Rorug05G0467000 Rorug07G0110400
rosa_samantha Rh1AG183500 Rh1AG416000 Rh1BG023600 Rh1BG145400 Rh1BG145500 Rh1BG278800 Rh1BG375400 Rh1CG389200 Rh1DG166300 Rh1DG176900 Rh1DG309900 Rh1DG406000 Rh2BG439100 Rh2BG502200 Rh2CG314800 Rh2CG517400 Rh2CG532000 Rh2DG449100 Rh3BG109900 Rh3CG230400 Rh3CG246600 Rh3CG289400 Rh3CG289500 Rh3DG120600 Rh4AG144400 Rh4AG408200 Rh4BG419300 Rh4CG101900 Rh4CG151000 Rh4CG226900 Rh4DG235400 Rh5AG265900 Rh5AG375200 Rh5CG559600 Rh5DG218200 Rh6AG074500 Rh6BG291800 Rh6CG292800 Rh6DG284900
rosa_wichuraiana Rw0G013240 Rw1G036490 Rw5G024920 Rw5G030730 Rw5G033710 Rw6G033840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 668
Acc36I ACCTGC 2 cut(s) 668, 1567
AccB7I CCANNNNNTGG 3 cut(s) 1031, 1145, 1328
AccBSI CCGCTC 1 cut(s) 335
AccI GTMKAC 1 cut(s) 1555
AccII CGCG 1 cut(s) 571
AciI CCGC 1 cut(s) 335
AclWI GGATC 4 cut(s) 42, 723, 971, 1135
AcoI YGGCCR 1 cut(s) 697
AcsI RAATTY 2 cut(s) 64, 849
AcuI CTGAAG 2 cut(s) 172, 1427
AfaI GTAC 4 cut(s) 630, 667, 765, 1533
AfiI CCNNNNNNNGG 9 cut(s) 92, 328, 590, 912, 913, 1031, 1145, 1324, 1328
AgsI TTSAA 8 cut(s) 41, 353, 389, 560, 844, 958, 1111, 1119
AjnI CCWGG 3 cut(s) 321, 694, 987
AjuI GAANNNNNNNTTGG 2 cut(s) 1403, 1435
Alw21I GWGCWC 1 cut(s) 58
AlwI GGATC 4 cut(s) 42, 723, 971, 1135
AlwNI CAGNNNCTG 2 cut(s) 115, 695
AoxI GGCC 2 cut(s) 254, 697
ApeKI GCWGC 5 cut(s) 115, 225, 821, 1076, 1487
ApoI RAATTY 2 cut(s) 64, 849
ArsI GACNNNNNNTTYG 2 cut(s) 632, 664
Asp700I GAANNNNTTC 2 cut(s) 64, 1092
AspLEI GCGC 3 cut(s) 85, 225, 571
AspS9I GGNCC 1 cut(s) 1452
AsuHPI GGTGA 3 cut(s) 284, 617, 692
AsuNHI GCTAGC 1 cut(s) 565
AvaII GGWCC 1 cut(s) 1452
BaeI ACNNNNGTAYC 2 cut(s) 747, 780
BalI TGGCCA 1 cut(s) 699
BanII GRGCYC 1 cut(s) 58
BauI CACGAG 1 cut(s) 624
Bbv12I GWGCWC 1 cut(s) 58
BbvCI CCTCAGC 1 cut(s) 456
BbvI GCAGC 5 cut(s) 102, 237, 833, 1088, 1499
BccI CCATC 6 cut(s) 457, 595, 1025, 1322, 1326, 1397
BcgI CGANNNNNNTGC 2 cut(s) 965, 999
BciT130I CCWGG 3 cut(s) 323, 696, 989
BciVI GTATCC 2 cut(s) 914, 1576
BclI TGATCA 4 cut(s) 106, 1014, 1378, 1575
BfaI CTAG 2 cut(s) 566, 671
BfmI CTRYAG 1 cut(s) 376
BfuAI ACCTGC 2 cut(s) 668, 1567
BfuI GTATCC 2 cut(s) 914, 1576
BglII AGATCT 1 cut(s) 202
BisI GCNGC 5 cut(s) 116, 226, 822, 1077, 1488
BlsI GCNGC 5 cut(s) 117, 227, 823, 1078, 1489
Bme1390I CCNGG 3 cut(s) 323, 696, 989
Bme18I GGWCC 1 cut(s) 1452
BmgT120I GGNCC 1 cut(s) 1452
BmiI GGNNCC 3 cut(s) 751, 1022, 1135
BmrFI CCNGG 3 cut(s) 323, 696, 989
BmsI GCATC 2 cut(s) 102, 1420
BmtI GCTAGC 1 cut(s) 569
BpmI CTGGAG 2 cut(s) 516, 1503
Bpu10I CCTNAGC 1 cut(s) 456
BpuEI CTTGAG 1 cut(s) 561
Bsa29I ATCGAT 1 cut(s) 975
BsaJI CCNNGG 3 cut(s) 321, 528, 987
BsaXI ACNNNNNCTCC 4 cut(s) 1209, 1239, 1476, 1506
Bsc4I CCNNNNNNNGG 9 cut(s) 92, 328, 590, 912, 913, 1031, 1145, 1324, 1328
Bse118I RCCGGY 1 cut(s) 85
Bse1I ACTGG 1 cut(s) 499
Bse3DI GCAATG 1 cut(s) 860
BseBI CCWGG 3 cut(s) 323, 696, 989
BseCI ATCGAT 1 cut(s) 975
BseDI CCNNGG 3 cut(s) 321, 528, 987
BseGI GGATG 3 cut(s) 1318, 1333, 1389
BseLI CCNNNNNNNGG 9 cut(s) 92, 328, 590, 912, 913, 1031, 1145, 1324, 1328
BseMI GCAATG 1 cut(s) 860
BseMII CTCAG 3 cut(s) 22, 447, 1293
BseNI ACTGG 1 cut(s) 499
BseRI GAGGAG 1 cut(s) 1296
BseXI GCAGC 5 cut(s) 102, 237, 833, 1088, 1499
Bsh1236I CGCG 1 cut(s) 571
BshFI GGCC 2 cut(s) 256, 699
BshVI ATCGAT 1 cut(s) 975
BsiHKAI GWGCWC 1 cut(s) 58
BsiSI CCGG 1 cut(s) 86
BslFI GGGAC 2 cut(s) 566, 1516
BslI CCNNNNNNNGG 9 cut(s) 92, 328, 590, 912, 913, 1031, 1145, 1324, 1328
BsmFI GGGAC 2 cut(s) 566, 1516
BsnI GGCC 2 cut(s) 256, 699
Bsp1286I GDGCHC 1 cut(s) 58
Bsp1407I TGTACA 1 cut(s) 1531
BspACI CCGC 1 cut(s) 335
BspANI GGCC 2 cut(s) 256, 699
BspCNI CTCAG 3 cut(s) 21, 448, 1294
BspDI ATCGAT 1 cut(s) 975
BspFNI CGCG 1 cut(s) 571
BspLI GGNNCC 3 cut(s) 751, 1022, 1135
BspMI ACCTGC 2 cut(s) 668, 1567
BspOI GCTAGC 1 cut(s) 569
BspPI GGATC 4 cut(s) 42, 723, 971, 1135
BsrBI CCGCTC 1 cut(s) 335
BsrDI GCAATG 1 cut(s) 860
BsrFI RCCGGY 1 cut(s) 85
BsrGI TGTACA 1 cut(s) 1531
BsrI ACTGG 1 cut(s) 499
BssAI RCCGGY 1 cut(s) 85
BssECI CCNNGG 3 cut(s) 321, 528, 987
BssNAI GTATAC 1 cut(s) 1556
BssSI CACGAG 1 cut(s) 624
BssT1I CCWWGG 1 cut(s) 528
Bst1107I GTATAC 1 cut(s) 1556
Bst2BI CACGAG 1 cut(s) 624
Bst2UI CCWGG 3 cut(s) 323, 696, 989
Bst4CI ACNGT 5 cut(s) 380, 709, 926, 1115, 1418
BstAPI GCANNNNNTGC 1 cut(s) 524
BstAUI TGTACA 1 cut(s) 1531
BstC8I GCNNGC 2 cut(s) 567, 701
BstDEI CTNAG 4 cut(s) 8, 456, 632, 1302
BstF5I GGATG 3 cut(s) 1318, 1333, 1389
BstFNI CGCG 1 cut(s) 571
BstHHI GCGC 3 cut(s) 85, 225, 571
BstMWI GCNNNNNNNGC 9 cut(s) 124, 497, 524, 830, 998, 1076, 1178, 1187, 1307
BstNI CCWGG 3 cut(s) 323, 696, 989
BstSCI CCNGG 3 cut(s) 321, 694, 987
BstSFI CTRYAG 1 cut(s) 376
BstUI CGCG 1 cut(s) 571
BstV1I GCAGC 5 cut(s) 102, 237, 833, 1088, 1499
BstX2I RGATCY 4 cut(s) 34, 202, 715, 1127
BstYI RGATCY 4 cut(s) 34, 202, 715, 1127
BstZ17I GTATAC 1 cut(s) 1556
Bsu15I ATCGAT 1 cut(s) 975
BsuI GTATCC 2 cut(s) 914, 1576
BsuRI GGCC 2 cut(s) 256, 699
BsuTUI ATCGAT 1 cut(s) 975
BtsCI GGATG 3 cut(s) 1318, 1333, 1389
BtsIMutI CAGTG 1 cut(s) 492
BveI ACCTGC 2 cut(s) 668, 1567
Cac8I GCNNGC 2 cut(s) 567, 701
CaiI CAGNNNCTG 2 cut(s) 115, 695
CfoI GCGC 3 cut(s) 85, 225, 571
Cfr10I RCCGGY 1 cut(s) 85
Cfr13I GGNCC 1 cut(s) 1452
ClaI ATCGAT 1 cut(s) 975
CseI GACGC 1 cut(s) 107
Csp6I GTAC 4 cut(s) 629, 666, 764, 1532
CspCI CAANNNNNGTGG 2 cut(s) 1339, 1374
CviAII CATG 5 cut(s) 50, 767, 1012, 1165, 1602
CviQI GTAC 4 cut(s) 629, 666, 764, 1532
DdeI CTNAG 4 cut(s) 8, 456, 632, 1302
DraI TTTAAA 1 cut(s) 829
EaeI YGGCCR 1 cut(s) 697
Ecl136II GAGCTC 1 cut(s) 56
Eco130I CCWWGG 1 cut(s) 528
Eco24I GRGCYC 1 cut(s) 58
Eco47I GGWCC 1 cut(s) 1452
Eco53kI GAGCTC 1 cut(s) 56
Eco57I CTGAAG 2 cut(s) 172, 1427
EcoICRI GAGCTC 1 cut(s) 56
EcoRII CCWGG 3 cut(s) 321, 694, 987
EcoT14I CCWWGG 1 cut(s) 528
EcoT38I GRGCYC 1 cut(s) 58
ErhI CCWWGG 1 cut(s) 528
FaeI CATG 5 cut(s) 53, 770, 1015, 1168, 1605
FaqI GGGAC 2 cut(s) 566, 1516
FatI CATG 5 cut(s) 49, 766, 1011, 1164, 1601
FauNDI CATATG 2 cut(s) 652, 1198
FbaI TGATCA 4 cut(s) 106, 1014, 1378, 1575
FblI GTMKAC 1 cut(s) 1555
Fnu4HI GCNGC 5 cut(s) 116, 226, 822, 1077, 1488
FokI GGATG 3 cut(s) 1305, 1340, 1376
FriOI GRGCYC 1 cut(s) 58
Fsp4HI GCNGC 5 cut(s) 116, 226, 822, 1077, 1488
FspBI CTAG 2 cut(s) 566, 671
GlaI GCGC 3 cut(s) 84, 224, 570
GluI GCNGC 5 cut(s) 116, 226, 822, 1077, 1488
GsuI CTGGAG 2 cut(s) 516, 1503
HaeIII GGCC 2 cut(s) 256, 699
HapII CCGG 1 cut(s) 86
HgaI GACGC 1 cut(s) 107
HhaI GCGC 3 cut(s) 85, 225, 571
Hin1II CATG 5 cut(s) 53, 770, 1015, 1168, 1605
Hin6I GCGC 3 cut(s) 83, 223, 569
HinP1I GCGC 3 cut(s) 83, 223, 569
HincII GTYRAC 1 cut(s) 1057
HindII GTYRAC 1 cut(s) 1057
HinfI GANTC 6 cut(s) 4, 98, 163, 954, 1458, 1478
HpaII CCGG 1 cut(s) 86
HphI GGTGA 3 cut(s) 284, 617, 692
Hpy166II GTNNAC 4 cut(s) 629, 668, 1057, 1556
Hpy188I TCNGA 3 cut(s) 34, 111, 1407
Hpy188III TCNNGA 5 cut(s) 206, 1018, 1322, 1462, 1482
Hpy8I GTNNAC 4 cut(s) 629, 668, 1057, 1556
Hpy99I CGWCG 1 cut(s) 34
HpyAV CCTTC 4 cut(s) 260, 275, 604, 1082
HpyCH4III ACNGT 5 cut(s) 380, 709, 926, 1115, 1418
HpyCH4IV ACGT 1 cut(s) 29
HpyF10VI GCNNNNNNNGC 9 cut(s) 124, 497, 524, 830, 998, 1076, 1178, 1187, 1307
HpyF3I CTNAG 4 cut(s) 8, 456, 632, 1302
HpySE526I ACGT 1 cut(s) 29
Hsp92II CATG 5 cut(s) 53, 770, 1015, 1168, 1605
HspAI GCGC 3 cut(s) 83, 223, 569
Ksp22I TGATCA 4 cut(s) 106, 1014, 1378, 1575
Lsp1109I GCAGC 5 cut(s) 102, 237, 833, 1088, 1499
LweI GCATC 2 cut(s) 102, 1420
MaeI CTAG 2 cut(s) 566, 671
MaeII ACGT 1 cut(s) 29
MaeIII GTNAC 5 cut(s) 244, 655, 709, 791, 926
MbiI CCGCTC 1 cut(s) 335
MboII GAAGA 5 cut(s) 29, 72, 406, 417, 1420
MfeI CAATTG 2 cut(s) 122, 1071
MflI RGATCY 4 cut(s) 34, 202, 715, 1127
MhlI GDGCHC 1 cut(s) 58
MlsI TGGCCA 1 cut(s) 699
MluCI AATT 8 cut(s) 64, 122, 326, 462, 733, 849, 933, 1071
MluNI TGGCCA 1 cut(s) 699
MlyI GAGTC 2 cut(s) 1452, 1487
MmeI TCCRAC 6 cut(s) 12, 150, 702, 898, 1258, 1339
Mox20I TGGCCA 1 cut(s) 699
MroXI GAANNNNTTC 2 cut(s) 64, 1092
MscI TGGCCA 1 cut(s) 699
MseI TTAA 5 cut(s) 180, 219, 828, 1040, 1518
MslI CAYNNNNRTG 2 cut(s) 435, 1447
Msp20I TGGCCA 1 cut(s) 699
MspA1I CMGCKG 1 cut(s) 1490
MspI CCGG 1 cut(s) 86
MspR9I CCNGG 3 cut(s) 323, 696, 989
MunI CAATTG 2 cut(s) 122, 1071
MvaI CCWGG 3 cut(s) 323, 696, 989
MvnI CGCG 1 cut(s) 571
MwoI GCNNNNNNNGC 9 cut(s) 124, 497, 524, 830, 998, 1076, 1178, 1187, 1307
NdeI CATATG 2 cut(s) 652, 1198
NheI GCTAGC 1 cut(s) 565
NlaIII CATG 5 cut(s) 53, 770, 1015, 1168, 1605
NlaIV GGNNCC 3 cut(s) 751, 1022, 1135
NmuCI GTSAC 3 cut(s) 244, 655, 791
PaqCI CACCTGC 1 cut(s) 668
PdmI GAANNNNTTC 2 cut(s) 64, 1092
PfeI GAWTC 3 cut(s) 98, 163, 954
PflFI GACNNNGTC 1 cut(s) 506
PflMI CCANNNNNTGG 3 cut(s) 1031, 1145, 1328
PkrI GCNGC 5 cut(s) 117, 227, 823, 1078, 1489
PleI GAGTC 2 cut(s) 1452, 1486
PpsI GAGTC 2 cut(s) 1452, 1486
Psp124BI GAGCTC 1 cut(s) 58
Psp6I CCWGG 3 cut(s) 321, 694, 987
PspGI CCWGG 3 cut(s) 321, 694, 987
PspN4I GGNNCC 3 cut(s) 751, 1022, 1135
PspPI GGNCC 1 cut(s) 1452
PstNI CAGNNNCTG 2 cut(s) 115, 695
PsuI RGATCY 4 cut(s) 34, 202, 715, 1127
PsyI GACNNNGTC 1 cut(s) 506
PvuII CAGCTG 1 cut(s) 1490
RsaI GTAC 4 cut(s) 630, 667, 765, 1533
RsaNI GTAC 4 cut(s) 629, 666, 764, 1532
RseI CAYNNNNRTG 2 cut(s) 435, 1447
SacI GAGCTC 1 cut(s) 58
SaqAI TTAA 5 cut(s) 180, 219, 828, 1040, 1518
SatI GCNGC 5 cut(s) 116, 226, 822, 1077, 1488
Sau96I GGNCC 1 cut(s) 1452
SchI GAGTC 2 cut(s) 1452, 1487
ScrFI CCNGG 3 cut(s) 323, 696, 989
SduI GDGCHC 1 cut(s) 58
SfaNI GCATC 2 cut(s) 102, 1420
SfcI CTRYAG 1 cut(s) 376
SinI GGWCC 1 cut(s) 1452
SmiMI CAYNNNNRTG 2 cut(s) 435, 1447
SmlI CTYRAG 1 cut(s) 576
SmoI CTYRAG 1 cut(s) 576
Sse9I AATT 8 cut(s) 64, 122, 326, 462, 733, 849, 933, 1071
SsiI CCGC 1 cut(s) 335
SspI AATATT 1 cut(s) 555
SspMI CTAG 2 cut(s) 566, 671
SstI GAGCTC 1 cut(s) 58
StyD4I CCNGG 3 cut(s) 321, 694, 987
StyI CCWWGG 1 cut(s) 528
TaaI ACNGT 5 cut(s) 380, 709, 926, 1115, 1418
TaiI ACGT 1 cut(s) 32
TaqI TCGA 6 cut(s) 58, 68, 207, 975, 1096, 1539
TaqII GACCGA 2 cut(s) 35, 1481
TasI AATT 8 cut(s) 64, 122, 326, 462, 733, 849, 933, 1071
TatI WGTACW 3 cut(s) 628, 763, 1531
TfiI GAWTC 3 cut(s) 98, 163, 954
Tru1I TTAA 5 cut(s) 180, 219, 828, 1040, 1518
Tru9I TTAA 5 cut(s) 180, 219, 828, 1040, 1518
TscAI CASTG 1 cut(s) 499
TseFI GTSAC 3 cut(s) 244, 655, 791
TseI GCWGC 5 cut(s) 115, 225, 821, 1076, 1487
Tsp45I GTSAC 3 cut(s) 244, 655, 791
TspDTI ATGAA 3 cut(s) 294, 303, 1379
TspGWI ACGGA 3 cut(s) 9, 554, 728
TspRI CASTG 1 cut(s) 499
Tth111I GACNNNGTC 1 cut(s) 506
Van91I CCANNNNNTGG 3 cut(s) 1031, 1145, 1328
VpaK11BI GGWCC 1 cut(s) 1452
XapI RAATTY 2 cut(s) 64, 849
XcmI CCANNNNNNNNNTGG 1 cut(s) 1325
XmiI GTMKAC 1 cut(s) 1555
XmnI GAANNNNTTC 2 cut(s) 64, 1092
XspI CTAG 2 cut(s) 566, 671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.