Rorug01G0398700

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000325
Physical Location & Seq
Reverse (-)
50713088 .. 50719486
6399 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0398700.1

Sequence Viewer

Length: 2151 bp
ATGCTTCTTCGTCTTCTTCGTGCCTACATCAGCCGCGAAACCCTAGCCTCTCTCCTCAAACCCCTCAGACTAGTCCACCGCAAAGTCCGAACCTTTTTCCTCTTCTTCAAAATGTCCCAACCCACCTCTCCACAGTCCTCCGCCCCAACCCCTCCGCCATTCGACCCGACCCGGCCCTCCATACCCATCTCGTACCCGATCAAAACCCTCGAAGAGCTCGAATCCCGATCCTACTTCGACTCCTTCCACTACCCCTTTAACAAATCCTCCGTGGCTCTCCCATCTGGGCCGTCGGGTCTGCCCAATCGGCCCAGATTGCTCGTCTGCCATGACATGGCCGGTGGCTATGGAGATGATAGGTGGATCCAAGGAGGGACGAATCCGAATGCGTATTCGATATGGCACTGGTATTTGATTGATATCTTCATCTACTTTTCGCATAGTCTTGTGGCTCTTCCACCCCCTTGTTGGACTAACACGGCTCATAAGCATGGTGTTAAGGTGTTGGGGACTTTCATCACAGAATGGGAAGAAGGGAAACTTATATGCAACAAATTGCTGTCTACAAAAGAGTCTGTGGAGATGTATGCTGAGCGCTTGGTAGAGCTTGCTGTTGCTTTGGGCTTCGATGGATGGCTGATCAATATGGAAGTTGAATTGGAATTGGGCCAAATTCCTAATTTGAAAGCATTTGTCAGCCACTTAACCCAGAGAATGCATTCCTCAGTCCCTGGATCTTTAGTGATATGGTATGATAGTGTTACAACTGACGGTAAACTTAACTGGCAAGATCAACTAAATGAAAAGAATAAACCATTCTTTGATATATCTGACGGAATTTTCGTGAACTATACATGGAAGCAAAATTATCCGAAGCAATCAGCTGCTGTTGCAGGTGATAGAAAGTTTGATGTATATATGGGTATTGATGTATTTGGAAGGGGCACTTTCGGTGGCGGACAATGGAATGCAAGTGTTGCACTTGATATGCTGAAAAATGATGATGTGTCAGCTGCCATATTTGCTCCTGGATGGATCTATGAGACTAATCAACCACCGAACTTCCAGAATGCTCAGAATCATTGGTGGGCCCTTGTGGAAAAATCCTGGGGAATAACACAGAATTATCCTACTGTTCTACCATTCTATTCAAATTTTGATCAGGGTCATGGATACCATGTTTCTGTTGAAGGCGAGGAAGTATCAGATGCTTCTTGGTGTAACATTTCTTCCCAAAGTTTTCAGCCTTTGCTTCTGTTCACTGATAATTCAACTCCAGATGGTATTCAGGTCCATGTTGACTTCAGGGAAGCATCTTACAGTGGAGGAGGAAACATCACATTTAAAGGAAACCTTGAAGACAATGCTGATTTCACTGCAAGGCTCTTTCAAGGAGATCTTCTTTTGGGGGACTTGCCTCTTCACTTCGTATATTCAGTGAAATCGGAGAATAATTCTCGACTAGGCCTTTTTCTTAATTTTGTTTCTACTCTAAACAAAAAAAAGTCGGTACTTCTTGTATCCTGGAATTCGAACCAATTCTCAAGCAAATTTAGTACAGTGATTAGGACACGTCAACTTGAAAGACCAGGAACTGCCCCTGGATGGGTTATAGAGGAGAGTAGCATCAGAATGAAGGGATGCAGACTAACTGAAATACATGCGGTGTGCTACAGGTCAAAGCCTGAGTTTGATGAAAAGATACCGAAATCCAAAACTAGCCAAGATAATTCTTGTGCTCATAATTCTACGGAGTACTATGCAGTGCTTGGTCATATTTCAGTGAAATCTTGTGGACAAAATTCAGATTTTCCACCTTCCGATACGTGGCTTGTCCAAGGTCAATTCATCCAATGGACTACAGGATCTGAGGATTCCAAGTACCTTAGTCTTAAGATCGCTTGGAAATTGAAAGATGGGAATGATTCTGCATACTCAACCTATAACATTTATGTTGAGAAACTAGCAGAAGGAAAACCAAGAGGACACTCCTATCTTGGAGTGGCTAGAGTGGAAGCTTTTTATGTTTATGACCTGGCAGTTCCTTCTGACACTTCTACCATCAAGTTCATTATTCAAGTGTGTGGTGGTGATGGGAGTAGCCAGAAACTAGATGACTCTCCGGTTTTTCTGTTGGATACTGAAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

716

Amino Acids

80.61

Weight (kDa)

6.01

Isoelectric Point (pI)

42.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_85 PF03644 116 - 393 2.1e-102 Glycosyl hydrolase family 85
Ig_ENGASE1_C PF25529 603 - 714 6.8e-30 ENGASE1-like, C-terminal immunoglobulin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000325)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g24391 FvH4_2g38071 FvH4_3g07131 FvH4_3g22481 FvH4_4g15809 FvH4_5g37230 FvH4_7g25201 FvH4_7g29092 FvH4_7g29093
malus_domestica MD01G1197600.v1.1 MD17G1186900.v1.1
prunus_persica Prupe.1G227400_v2.0.a1 Prupe.2G291000_v2.0.a1 Prupe.4G268600_v2.0.a1 Prupe.5G094100_v2.0.a1
pyrus_communis pycom01g20780 pycom17g19620
rosa_chinensis RchiOBHm_Chr1g0376821 RchiOBHm_Chr5g0061941 RchiOBHm_Chr5g0078991 RchiOBHm_Chr6g0276821 RchiOBHm_Chr7g0191321
rosa_laevigata RLG00000007883 RLG00000008804 RLG00000010632 RLG00000026567 RLG00000035244 RLG00000036018 RLG00000036909
rosa_multiflora Rmu_sc0001036.1_g000026 Rmu_sc0001556.1_g000021 Rmu_sc0001974.1_g000022 Rmu_sc0002113.1_g000006 Rmu_sc0002572.1_g000008 Rmu_sc0004808.1_g000011 Rmu_sc0005117.1_g000017 Rmu_sc0005319.1_g000016 Rmu_sc0008432.1_g000005 Rmu_sc0010475.1_g000001 Rmu_sc0015522.1_g000003 Rmu_ssc0000066.1_g000009 Rmu_ssc0000400.1_g000102 Rmu_ssc0000400.1_g000103
rosa_roxburghii Rroxscaffold_1G00071290 Rroxscaffold_2G00141280 Rroxscaffold_3G00233790 Rroxscaffold_4G00297530 Rroxscaffold_5G00368860 Rroxscaffold_5G00386220 Rroxscaffold_7G00159400
rosa_rugosa Rorug01G0146800.1 Rorug01G0162100.1 Rorug01G0162200.1 Rorug01G0398600 Rorug01G0398700 Rorug02G0344200 Rorug02G0344300 Rorug02G0344400 Rorug03G0046200 Rorug03G0153200 Rorug04G0182500 Rorug04G0182600 Rorug05G0257700 Rorug05G0386400 Rorug05G0386400 Rorug05G0386500 Rorug05G0460900.1 Rorug05G0467000 Rorug07G0110400
rosa_samantha Rh1AG183500 Rh1AG416000 Rh1BG023600 Rh1BG145400 Rh1BG145500 Rh1BG278800 Rh1BG375400 Rh1CG389200 Rh1DG166300 Rh1DG176900 Rh1DG309900 Rh1DG406000 Rh2BG439100 Rh2BG502200 Rh2CG314800 Rh2CG517400 Rh2CG532000 Rh2DG449100 Rh3BG109900 Rh3CG230400 Rh3CG246600 Rh3CG289400 Rh3CG289500 Rh3DG120600 Rh4AG144400 Rh4AG408200 Rh4BG419300 Rh4CG101900 Rh4CG151000 Rh4CG226900 Rh4DG235400 Rh5AG265900 Rh5AG375200 Rh5CG559600 Rh5DG218200 Rh6AG074500 Rh6BG291800 Rh6CG292800 Rh6DG284900
rosa_wichuraiana Rw0G013240 Rw1G036490 Rw5G024920 Rw5G030730 Rw5G033710 Rw6G033840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 884
Acc36I ACCTGC 1 cut(s) 884
AccB7I CCANNNNNTGG 1 cut(s) 334
AccI GTMKAC 1 cut(s) 563
AccII CGCG 1 cut(s) 36
AciI CCGC 6 cut(s) 34, 79, 141, 155, 957, 1664
AclWI GGATC 6 cut(s) 222, 358, 371, 742, 1043, 1873
AcoI YGGCCR 1 cut(s) 336
AcsI RAATTY 6 cut(s) 672, 837, 1153, 1528, 1550, 1801
AcuI CTGAAG 1 cut(s) 1288
AfaI GTAC 5 cut(s) 194, 1512, 1558, 1757, 1883
AfeI AGCGCT 1 cut(s) 596
AfiI CCNNNNNNNGG 5 cut(s) 334, 468, 1605, 1606, 1827
AflII CTTAAG 1 cut(s) 1892
AflIII ACRYGT 1 cut(s) 1571
AhlI ACTAGT 1 cut(s) 70
AjiI CACGTC 1 cut(s) 1574
AjnI CCWGG 7 cut(s) 730, 1027, 1106, 1523, 1588, 1600, 2034
AluBI AGCT 6 cut(s) 217, 607, 884, 1013, 2018, 2147
AluI AGCT 6 cut(s) 217, 607, 884, 1013, 2018, 2147
Alw21I GWGCWC 2 cut(s) 219, 1741
Alw26I GTCTC 1 cut(s) 1037
AlwI GGATC 6 cut(s) 222, 358, 371, 742, 1043, 1873
AlwNI CAGNNNCTG 4 cut(s) 731, 887, 1595, 1868
Aor51HI AGCGCT 1 cut(s) 596
AoxI GGCC 7 cut(s) 173, 287, 308, 336, 667, 1089, 1465
ApaI GGGCCC 1 cut(s) 1093
ApeKI GCWGC 2 cut(s) 884, 1013
ApoI RAATTY 6 cut(s) 672, 837, 1153, 1528, 1550, 1801
ArsI GACNNNNNNTTYG 2 cut(s) 824, 856
Asp700I GAANNNNTTC 2 cut(s) 718, 1538
AspLEI GCGC 1 cut(s) 597
AspS9I GGNCC 7 cut(s) 174, 287, 309, 667, 1089, 1090, 1291
AsuC2I CCSGG 1 cut(s) 172
AsuHPI GGTGA 2 cut(s) 908, 2102
AsuII TTCGAA 1 cut(s) 1532
AvaII GGWCC 1 cut(s) 1291
BaeGI GKGCMC 2 cut(s) 947, 1093
BamHI GGATCC 1 cut(s) 363
BanII GRGCYC 2 cut(s) 219, 1093
BarI GAAGNNNNNNTAC 2 cut(s) 1213, 1245
BbsI GAAGAC 2 cut(s) 5, 1365
Bbv12I GWGCWC 2 cut(s) 219, 1741
BbvI GCAGC 2 cut(s) 871, 1000
BceAI ACGGC 2 cut(s) 274, 495
BciT130I CCWGG 7 cut(s) 732, 1029, 1108, 1525, 1590, 1602, 2036
BciVI GTATCC 3 cut(s) 1166, 1531, 2131
BclI TGATCA 2 cut(s) 639, 1159
BcnI CCSGG 1 cut(s) 172
BcoDI GTCTC 1 cut(s) 1037
BcuI ACTAGT 1 cut(s) 70
BfaI CTAG 7 cut(s) 44, 71, 1463, 1719, 1964, 2007, 2111
BfmI CTRYAG 2 cut(s) 1672, 1860
BfoI RGCGCY 1 cut(s) 598
BfrI CTTAAG 1 cut(s) 1892
BfuAI ACCTGC 1 cut(s) 884
BfuI GTATCC 3 cut(s) 1166, 1531, 2131
BglI GCCNNNNNGGC 1 cut(s) 307
BglII AGATCT 1 cut(s) 1396
BisI GCNGC 3 cut(s) 34, 885, 1014
BlpI GCTNAGC 1 cut(s) 591
BlsI GCNGC 3 cut(s) 35, 886, 1015
BmcAI AGTACT 1 cut(s) 1757
Bme1390I CCNGG 8 cut(s) 172, 732, 1029, 1108, 1525, 1590, 1602, 2036
Bme18I GGWCC 1 cut(s) 1291
BmgBI CACGTC 1 cut(s) 1574
BmgT120I GGNCC 7 cut(s) 174, 287, 309, 667, 1089, 1090, 1291
BmiI GGNNCC 2 cut(s) 365, 1091
BmrFI CCNGG 8 cut(s) 172, 732, 1029, 1108, 1525, 1590, 1602, 2036
BmsI GCATC 4 cut(s) 1198, 1322, 1631, 1635
BpiI GAAGAC 2 cut(s) 5, 1365
BpmI CTGGAG 1 cut(s) 1260
Bpu1102I GCTNAGC 1 cut(s) 591
Bpu14I TTCGAA 1 cut(s) 1532
BpuEI CTTGAG 1 cut(s) 1528
BpuMI CCSGG 1 cut(s) 172
BsaAI YACGTR 1 cut(s) 1827
BsaBI GATNNNNATC 1 cut(s) 419
BsaJI CCNNGG 6 cut(s) 270, 367, 730, 1107, 1600, 1837
BsaWI WCCGGW 1 cut(s) 2122
BsaXI ACNNNNNCTCC 4 cut(s) 224, 251, 254, 281
Bsc4I CCNNNNNNNGG 5 cut(s) 334, 468, 1605, 1606, 1827
Bse118I RCCGGY 1 cut(s) 338
Bse1I ACTGG 2 cut(s) 410, 788
Bse8I GATNNNNATC 1 cut(s) 419
BseBI CCWGG 7 cut(s) 732, 1029, 1108, 1525, 1590, 1602, 2036
BseDI CCNNGG 6 cut(s) 270, 367, 730, 1107, 1600, 1837
BseGI GGATG 5 cut(s) 638, 1037, 1610, 1646, 1848
BseJI GATNNNNATC 1 cut(s) 419
BseLI CCNNNNNNNGG 5 cut(s) 334, 468, 1605, 1606, 1827
BseMII CTCAG 6 cut(s) 79, 582, 738, 1088, 1677, 1860
BseNI ACTGG 2 cut(s) 410, 788
BseRI GAGGAG 3 cut(s) 44, 1341, 1631
BseSI GKGCMC 2 cut(s) 947, 1093
BseXI GCAGC 2 cut(s) 871, 1000
Bsh1236I CGCG 1 cut(s) 36
BshFI GGCC 7 cut(s) 175, 289, 310, 338, 669, 1091, 1467
BsiHKAI GWGCWC 2 cut(s) 219, 1741
BsiSI CCGG 3 cut(s) 172, 339, 2123
BslFI GGGAC 5 cut(s) 100, 388, 523, 713, 1424
BslI CCNNNNNNNGG 5 cut(s) 334, 468, 1605, 1606, 1827
BsmAI GTCTC 1 cut(s) 1037
BsmFI GGGAC 5 cut(s) 100, 388, 523, 713, 1424
BsmI GAATGC 5 cut(s) 391, 718, 720, 973, 1075
BsnI GGCC 7 cut(s) 175, 289, 310, 338, 669, 1091, 1467
Bsp119I TTCGAA 1 cut(s) 1532
Bsp120I GGGCCC 1 cut(s) 1089
Bsp1286I GDGCHC 4 cut(s) 219, 947, 1093, 1741
Bsp1720I GCTNAGC 1 cut(s) 591
BspACI CCGC 6 cut(s) 34, 79, 141, 155, 957, 1664
BspANI GGCC 7 cut(s) 175, 289, 310, 338, 669, 1091, 1467
BspCNI CTCAG 6 cut(s) 78, 583, 737, 1087, 1678, 1861
BspFNI CGCG 1 cut(s) 36
BspLI GGNNCC 2 cut(s) 365, 1091
BspMI ACCTGC 1 cut(s) 884
BspPI GGATC 6 cut(s) 222, 358, 371, 742, 1043, 1873
BspQI GCTCTTC 2 cut(s) 207, 459
BspT104I TTCGAA 1 cut(s) 1532
BspTI CTTAAG 1 cut(s) 1892
BsrFI RCCGGY 1 cut(s) 338
BsrI ACTGG 2 cut(s) 410, 788
BssAI RCCGGY 1 cut(s) 338
BssECI CCNNGG 6 cut(s) 270, 367, 730, 1107, 1600, 1837
BssT1I CCWWGG 2 cut(s) 367, 1837
Bst2UI CCWGG 7 cut(s) 732, 1029, 1108, 1525, 1590, 1602, 2036
Bst4CI ACNGT 5 cut(s) 135, 773, 1135, 1322, 1561
Bst6I CTCTTC 4 cut(s) 107, 207, 459, 1425
BstAFI CTTAAG 1 cut(s) 1892
BstAPI GCANNNNNTGC 1 cut(s) 977
BstBAI YACGTR 1 cut(s) 1827
BstBI TTCGAA 1 cut(s) 1532
BstC8I GCNNGC 1 cut(s) 609
BstDEI CTNAG 7 cut(s) 65, 591, 724, 1074, 1686, 1869, 1886
BstDSI CCRYGG 1 cut(s) 270
BstF5I GGATG 5 cut(s) 638, 1037, 1610, 1646, 1848
BstFNI CGCG 1 cut(s) 36
BstH2I RGCGCY 1 cut(s) 598
BstHHI GCGC 1 cut(s) 597
BstMAI GTCTC 1 cut(s) 1037
BstMWI GCNNNNNNNGC 5 cut(s) 307, 316, 890, 977, 1022
BstNI CCWGG 7 cut(s) 732, 1029, 1108, 1525, 1590, 1602, 2036
BstNSI RCATGY 1 cut(s) 1664
BstSCI CCNGG 8 cut(s) 170, 730, 1027, 1106, 1523, 1588, 1600, 2034
BstSFI CTRYAG 2 cut(s) 1672, 1860
BstSLI GKGCMC 2 cut(s) 947, 1093
BstUI CGCG 1 cut(s) 36
BstV1I GCAGC 2 cut(s) 871, 1000
BstV2I GAAGAC 2 cut(s) 5, 1365
BstX2I RGATCY 5 cut(s) 363, 734, 1035, 1396, 1865
BstYI RGATCY 5 cut(s) 363, 734, 1035, 1396, 1865
BsuI GTATCC 3 cut(s) 1166, 1531, 2131
BsuRI GGCC 7 cut(s) 175, 289, 310, 338, 669, 1091, 1467
BtgI CCRYGG 1 cut(s) 270
BtrI CACGTC 1 cut(s) 1574
BtsCI GGATG 5 cut(s) 638, 1037, 1610, 1646, 1848
BtsI GCAGTG 2 cut(s) 1374, 1770
BtsIMutI CAGTG 8 cut(s) 403, 1260, 1327, 1374, 1443, 1566, 1770, 1788
BveI ACCTGC 1 cut(s) 884
Cac8I GCNNGC 1 cut(s) 609
CaiI CAGNNNCTG 4 cut(s) 731, 887, 1595, 1868
CfoI GCGC 1 cut(s) 597
Cfr10I RCCGGY 1 cut(s) 338
Cfr13I GGNCC 7 cut(s) 174, 287, 309, 667, 1089, 1090, 1291
Csp6I GTAC 5 cut(s) 193, 1511, 1557, 1756, 1882
CviAII CATG 8 cut(s) 329, 334, 491, 855, 1169, 1178, 1295, 1661
CviQI GTAC 5 cut(s) 193, 1511, 1557, 1756, 1882
DdeI CTNAG 7 cut(s) 65, 591, 724, 1074, 1686, 1869, 1886
DraI TTTAAA 1 cut(s) 1345
EaeI YGGCCR 1 cut(s) 336
Eam1104I CTCTTC 4 cut(s) 107, 207, 459, 1425
EarI CTCTTC 4 cut(s) 107, 207, 459, 1425
EciI GGCGGA 3 cut(s) 130, 144, 972
Ecl136II GAGCTC 1 cut(s) 217
Eco130I CCWWGG 2 cut(s) 367, 1837
Eco147I AGGCCT 1 cut(s) 1467
Eco24I GRGCYC 2 cut(s) 219, 1093
Eco32I GATATC 1 cut(s) 421
Eco47I GGWCC 1 cut(s) 1291
Eco47III AGCGCT 1 cut(s) 596
Eco53kI GAGCTC 1 cut(s) 217
Eco57I CTGAAG 1 cut(s) 1288
EcoICRI GAGCTC 1 cut(s) 217
EcoO109I RGGNCCY 1 cut(s) 1090
EcoRI GAATTC 1 cut(s) 1528
EcoRII CCWGG 7 cut(s) 730, 1027, 1106, 1523, 1588, 1600, 2034
EcoRV GATATC 1 cut(s) 421
EcoT14I CCWWGG 2 cut(s) 367, 1837
EcoT22I ATGCAT 1 cut(s) 720
EcoT38I GRGCYC 2 cut(s) 219, 1093
ErhI CCWWGG 2 cut(s) 367, 1837
FaeI CATG 8 cut(s) 332, 337, 494, 858, 1172, 1181, 1298, 1664
FalI AAGNNNNNCTT 8 cut(s) 525, 557, 931, 963, 1338, 1370, 1383, 1415
FaqI GGGAC 5 cut(s) 100, 388, 523, 713, 1424
FatI CATG 8 cut(s) 328, 333, 490, 854, 1168, 1177, 1294, 1660
FbaI TGATCA 2 cut(s) 639, 1159
FblI GTMKAC 1 cut(s) 563
Fnu4HI GCNGC 3 cut(s) 34, 885, 1014
FokI GGATG 5 cut(s) 645, 1044, 1617, 1653, 1835
FriOI GRGCYC 2 cut(s) 219, 1093
Fsp4HI GCNGC 3 cut(s) 34, 885, 1014
FspBI CTAG 7 cut(s) 44, 71, 1463, 1719, 1964, 2007, 2111
GlaI GCGC 1 cut(s) 596
GluI GCNGC 3 cut(s) 34, 885, 1014
GsuI CTGGAG 1 cut(s) 1260
HaeII RGCGCY 1 cut(s) 598
HaeIII GGCC 7 cut(s) 175, 289, 310, 338, 669, 1091, 1467
HapII CCGG 3 cut(s) 172, 339, 2123
HhaI GCGC 1 cut(s) 597
Hin1II CATG 8 cut(s) 332, 337, 494, 858, 1172, 1181, 1298, 1664
Hin6I GCGC 1 cut(s) 595
HinP1I GCGC 1 cut(s) 595
HincII GTYRAC 2 cut(s) 1300, 1577
HindII GTYRAC 2 cut(s) 1300, 1577
HindIII AAGCTT 2 cut(s) 2016, 2145
HinfI GANTC 8 cut(s) 221, 239, 379, 572, 1078, 1874, 1925, 2117
HpaII CCGG 3 cut(s) 172, 339, 2123
HphI GGTGA 2 cut(s) 908, 2102
Hpy166II GTNNAC 8 cut(s) 76, 564, 776, 847, 1260, 1300, 1577, 1796
Hpy188III TCNNGA 5 cut(s) 225, 844, 1066, 1277, 1458
Hpy8I GTNNAC 8 cut(s) 76, 564, 776, 847, 1260, 1300, 1577, 1796
Hpy99I CGWCG 1 cut(s) 295
HpyAV CCTTC 8 cut(s) 253, 527, 933, 1184, 1630, 1827, 1964, 2055
HpyCH4III ACNGT 5 cut(s) 135, 773, 1135, 1322, 1561
HpyCH4IV ACGT 2 cut(s) 1573, 1826
HpyCH4V TGCA 9 cut(s) 549, 718, 893, 971, 980, 1379, 1644, 1763, 1931
HpyF10VI GCNNNNNNNGC 5 cut(s) 307, 316, 890, 977, 1022
HpyF3I CTNAG 7 cut(s) 65, 591, 724, 1074, 1686, 1869, 1886
HpySE526I ACGT 2 cut(s) 1573, 1826
Hsp92II CATG 8 cut(s) 332, 337, 494, 858, 1172, 1181, 1298, 1664
HspAI GCGC 1 cut(s) 595
Ksp22I TGATCA 2 cut(s) 639, 1159
LguI GCTCTTC 2 cut(s) 207, 459
LmnI GCTCC 1 cut(s) 1030
Lsp1109I GCAGC 2 cut(s) 871, 1000
LweI GCATC 4 cut(s) 1198, 1322, 1631, 1635
MaeI CTAG 7 cut(s) 44, 71, 1463, 1719, 1964, 2007, 2111
MaeII ACGT 2 cut(s) 1573, 1826
MaeIII GTNAC 2 cut(s) 760, 1220
MflI RGATCY 5 cut(s) 363, 734, 1035, 1396, 1865
MhlI GDGCHC 4 cut(s) 219, 947, 1093, 1741
MlyI GAGTC 3 cut(s) 233, 581, 2111
MmeI TCCRAC 2 cut(s) 449, 2115
Mph1103I ATGCAT 1 cut(s) 720
MroXI GAANNNNTTC 2 cut(s) 718, 1538
MseI TTAA 7 cut(s) 258, 498, 704, 780, 1344, 1476, 1893
MslI CAYNNNNRTG 2 cut(s) 489, 1631
MspA1I CMGCKG 2 cut(s) 884, 1013
MspCI CTTAAG 1 cut(s) 1892
MspI CCGG 3 cut(s) 172, 339, 2123
MspR9I CCNGG 8 cut(s) 172, 732, 1029, 1108, 1525, 1590, 1602, 2036
Mva1269I GAATGC 5 cut(s) 391, 718, 720, 973, 1075
MvaI CCWGG 7 cut(s) 732, 1029, 1108, 1525, 1590, 1602, 2036
MvnI CGCG 1 cut(s) 36
MwoI GCNNNNNNNGC 5 cut(s) 307, 316, 890, 977, 1022
NciI CCSGG 1 cut(s) 172
NlaIII CATG 8 cut(s) 332, 337, 494, 858, 1172, 1181, 1298, 1664
NlaIV GGNNCC 2 cut(s) 365, 1091
NsiI ATGCAT 1 cut(s) 720
NspI RCATGY 1 cut(s) 1664
NspV TTCGAA 1 cut(s) 1532
PaqCI CACCTGC 1 cut(s) 884
PceI AGGCCT 1 cut(s) 1467
PciSI GCTCTTC 2 cut(s) 207, 459
PcsI WCGNNNNNNNCGW 3 cut(s) 16, 216, 840
PctI GAATGC 5 cut(s) 391, 718, 720, 973, 1075
PdmI GAANNNNTTC 2 cut(s) 718, 1538
PfeI GAWTC 5 cut(s) 221, 379, 1078, 1874, 1925
PflMI CCANNNNNTGG 1 cut(s) 334
PfoI TCCNGGA 2 cut(s) 1027, 1523
PkrI GCNGC 3 cut(s) 35, 886, 1015
PleI GAGTC 3 cut(s) 233, 580, 2111
PpsI GAGTC 3 cut(s) 233, 580, 2111
Ppu21I YACGTR 1 cut(s) 1827
Psp124BI GAGCTC 1 cut(s) 219
Psp6I CCWGG 7 cut(s) 730, 1027, 1106, 1523, 1588, 1600, 2034
PspGI CCWGG 7 cut(s) 730, 1027, 1106, 1523, 1588, 1600, 2034
PspN4I GGNNCC 2 cut(s) 365, 1091
PspOMI GGGCCC 1 cut(s) 1089
PspPI GGNCC 7 cut(s) 174, 287, 309, 667, 1089, 1090, 1291
PstNI CAGNNNCTG 4 cut(s) 731, 887, 1595, 1868
PsuI RGATCY 5 cut(s) 363, 734, 1035, 1396, 1865
PvuII CAGCTG 2 cut(s) 884, 1013
RsaI GTAC 5 cut(s) 194, 1512, 1558, 1757, 1883
RsaNI GTAC 5 cut(s) 193, 1511, 1557, 1756, 1882
RseI CAYNNNNRTG 2 cut(s) 489, 1631
SacI GAGCTC 1 cut(s) 219
SapI GCTCTTC 2 cut(s) 207, 459
SaqAI TTAA 7 cut(s) 258, 498, 704, 780, 1344, 1476, 1893
SatI GCNGC 3 cut(s) 34, 885, 1014
Sau96I GGNCC 7 cut(s) 174, 287, 309, 667, 1089, 1090, 1291
ScaI AGTACT 1 cut(s) 1757
SchI GAGTC 3 cut(s) 233, 581, 2111
ScrFI CCNGG 8 cut(s) 172, 732, 1029, 1108, 1525, 1590, 1602, 2036
SduI GDGCHC 4 cut(s) 219, 947, 1093, 1741
SfaNI GCATC 4 cut(s) 1198, 1322, 1631, 1635
SfcI CTRYAG 2 cut(s) 1672, 1860
SfuI TTCGAA 1 cut(s) 1532
SinI GGWCC 1 cut(s) 1291
SmiMI CAYNNNNRTG 2 cut(s) 489, 1631
SmlI CTYRAG 2 cut(s) 1543, 1892
SmoI CTYRAG 2 cut(s) 1543, 1892
SpeI ACTAGT 1 cut(s) 70
SseBI AGGCCT 1 cut(s) 1467
SsiI CCGC 6 cut(s) 34, 79, 141, 155, 957, 1664
SspMI CTAG 7 cut(s) 44, 71, 1463, 1719, 1964, 2007, 2111
SstI GAGCTC 1 cut(s) 219
StuI AGGCCT 1 cut(s) 1467
StyD4I CCNGG 8 cut(s) 170, 730, 1027, 1106, 1523, 1588, 1600, 2034
StyI CCWWGG 2 cut(s) 367, 1837
TaaI ACNGT 5 cut(s) 135, 773, 1135, 1322, 1561
TaiI ACGT 2 cut(s) 1576, 1829
TaqI TCGA 8 cut(s) 162, 210, 219, 237, 395, 627, 1459, 1532
TatI WGTACW 2 cut(s) 1556, 1755
TauI GCSGC 1 cut(s) 36
TfiI GAWTC 5 cut(s) 221, 379, 1078, 1874, 1925
Tru1I TTAA 7 cut(s) 258, 498, 704, 780, 1344, 1476, 1893
Tru9I TTAA 7 cut(s) 258, 498, 704, 780, 1344, 1476, 1893
TscAI CASTG 8 cut(s) 410, 1267, 1327, 1381, 1443, 1566, 1770, 1788
TseI GCWGC 2 cut(s) 884, 1013
TspDTI ATGAA 7 cut(s) 415, 505, 816, 1649, 1710, 1837, 2059
TspGWI ACGGA 3 cut(s) 259, 849, 1766
TspRI CASTG 8 cut(s) 410, 1267, 1327, 1381, 1443, 1566, 1770, 1788
Van91I CCANNNNNTGG 1 cut(s) 334
Vha464I CTTAAG 1 cut(s) 1892
VpaK11BI GGWCC 1 cut(s) 1291
XapI RAATTY 6 cut(s) 672, 837, 1153, 1528, 1550, 1801
XceI RCATGY 1 cut(s) 1664
XcmI CCANNNNNNNNNTGG 1 cut(s) 465
XmiI GTMKAC 1 cut(s) 563
XmnI GAANNNNTTC 2 cut(s) 718, 1538
XspI CTAG 7 cut(s) 44, 71, 1463, 1719, 1964, 2007, 2111
ZrmI AGTACT 1 cut(s) 1757
Zsp2I ATGCAT 1 cut(s) 720
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.