Rh1BG278800

Protein FAR1-RELATED SEQUENCE 5-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Forward (+)
41543042 .. 41548145
5104 bp
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UTR
Exon/CDS
Intron
Rh1BG278800.1

Sequence Viewer

Length: 2238 bp
ATGGAGTTTAGTTCCGATGAGAGTGCATATAGAGCTTATGCTAAATATGGAGGAAAATCTGGTTTCAATGTGAGGAAACAACGCAGGACAAGAAACAAGAATGGTTTGGTTGTTAGGTTAGTTTATTGTTGCTCAAAAGAAGGTTACCGAAAGACCAAAACAAAGGGGGAAACATCTTATTCAGTACCAGTTACAAGGGTCGGTTGTAAAGCCCATATGAGTTGCTATCGTCAAAACAACGGAAAATTAAAGATTGTGTCGTTTGAGAGGAATCATAATCATGAGTTGATTAAAACACCTATGAAGCATATGTTAAAGATCAATAGAAGTTTCTCTAAAGCTCAAAAAGAGCATGCTGATGATGCTGAGATGTCAGGAATTTCAGCAAAAGCAACAGTTGAATTGATGAGTAGAGAAGTTGGAGGACGAGAGAATCTTGGTTTTATGGAAAAGGACTATCGGAATTACATACATCGAAAGCGAAGGGTGAAGATGGAAAAGGGAGATGCTGGAGCTATATTGCAATACTTCCAAAAAATGAAAGAGGATAATTCATCTTCTTTTTATTCAATGCAGCTTGATGAGGATGATATGATCACAAATATTTTTTGGGCAGATGAGCGTTCAATAAGTGATTATGGTCTTTTTGGGGATGTCGTTTGTTTTGACACAACTTATCAAACTAATGAATATGGTAGACCATTTGCTCCATTTGTTGGGGTCAATCATCATAAGCAAACAGTGGTGTTTGGTGCAGCTCTATTATATGACGAAACCATTGAGTCCTTTAAGTGGCTTTTTGAGACTTTTCTTGGAGCGATGTCTGGAAAGCAACCAAAGACCATACTTACAGACCAATCTGCAGCAATTGCTAGTGCAATAGCAGAAGTATTTCCTGTCACTTATCATAGACTATGTATTTGGCATATTTACCAAAATGCTGCAAAGAGATTGAGTCATGTGTTTCACGGATCACAACAATTTGCTCATGATTTTGGAAAGTGTGTATATGACTATGAGGATGAAGATGATTGGTTTTTAGCATCGAATAATATGCTCGAGAAGCACAATTTGAAGGAGGATAAATGGTTAAAGAATTTGTTTGATGTGAGAGAAAAATGGGCATTGGTATACGGGCGACATACTTTTACTGCAGATATGATGAGTACACAACGTAGTGAGAGTATGAATAATATTTTGAAAAAATACTTGAAGCCTAGTTATGACCTGTTGTGCTTCTTTGAACACTATGAGAGAGTTTTGGCTGATCGAAGATATGAAGAATTAATTGCTGACTTCAAGATGATGCAAACTTCTCCTGTGTTATCTGCTAACGTAGAGATGTTGCAACATGCAGAGGAGGTGTATACCCCAGAAGCTTTTAGACTCTTCCAGCAACAATACACAAGTATTGGTGATTATGTTGCTAATAAAGTTAGCAAGTCTGAGATGCAATATGAATACAAAGTATCTTATCGTGGTGTTGCTCGAGAGCATTTGGTAAAATTTGATGCTTCAATGCAAACAATAACTTGTAGTTGCATGAAGTTTAATTTTGTTGGGATTTTATGCCGTCATGCAATGAAAGTGTTGGATAGGAAGAATGTGAGAAGAATCCCTCCTACTTGCATATTAAATCGATGGAGTAAAGAAGCTAAGGCAAGGAGCATCACTAGTTATCATGGACCAAAGACTAATGAAAATCTGAAGCAGTCGATTGGAAAGCGATACAGCCATTTGTGTCGTAATTATCGTGAGATTGCATCCTTTGCCTCAGAACATGAGGAACTAACAAGGTATGCAAATGAATATGCCATTGAGTTGCTTAAAAATTTGGAAGAAAAGAAGAAGAAAGTGTTGAAAGAAGATGCATGGGTGATTCAAACATCAGATATTGGAGCTTTAGAAGGTGAAGTATCAAATGCACGTGGAGTTAAAAGAAAAGCTACTGTTGGACGACCACGCGGTCGTCATGGTAGATTTAAAGGTGTTCTTGAAGGGAAGAGTTGTAAAGCCACATCTAAAGCATCAACATCTCTAGCAAGTAAAGCCGCAGCAAAGAAACAACTATCCTTCCAGGAGTCCAATCTTAGTGCTGGTACCCAAGTATCAGTTTATGGCACAGGTCTAACTTTGCAGAACGACTTTTCTTTCACTCAAATGCTCCAGGAAATTTCAATGAATCATATTTGCTCTTCACAAAGCAATGAAGGAGGCAAAGAGCAGTCTGGAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

745

Amino Acids

85.66

Weight (kDa)

9.19

Isoelectric Point (pI)

40.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 13 - 97 5.5e-18 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 179 - 299 1.8e-10 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 219 - 313 1.4e-31 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000325)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g24391 FvH4_2g38071 FvH4_3g07131 FvH4_3g22481 FvH4_4g15809 FvH4_5g37230 FvH4_7g25201 FvH4_7g29092 FvH4_7g29093
malus_domestica MD01G1197600.v1.1 MD17G1186900.v1.1
prunus_persica Prupe.1G227400_v2.0.a1 Prupe.2G291000_v2.0.a1 Prupe.4G268600_v2.0.a1 Prupe.5G094100_v2.0.a1
pyrus_communis pycom01g20780 pycom17g19620
rosa_chinensis RchiOBHm_Chr1g0376821 RchiOBHm_Chr5g0061941 RchiOBHm_Chr5g0078991 RchiOBHm_Chr6g0276821 RchiOBHm_Chr7g0191321
rosa_laevigata RLG00000007883 RLG00000008804 RLG00000010632 RLG00000026567 RLG00000035244 RLG00000036018 RLG00000036909
rosa_multiflora Rmu_sc0001036.1_g000026 Rmu_sc0001556.1_g000021 Rmu_sc0001974.1_g000022 Rmu_sc0002113.1_g000006 Rmu_sc0002572.1_g000008 Rmu_sc0004808.1_g000011 Rmu_sc0005117.1_g000017 Rmu_sc0005319.1_g000016 Rmu_sc0008432.1_g000005 Rmu_sc0010475.1_g000001 Rmu_sc0015522.1_g000003 Rmu_ssc0000066.1_g000009 Rmu_ssc0000400.1_g000102 Rmu_ssc0000400.1_g000103
rosa_roxburghii Rroxscaffold_1G00071290 Rroxscaffold_2G00141280 Rroxscaffold_3G00233790 Rroxscaffold_4G00297530 Rroxscaffold_5G00368860 Rroxscaffold_5G00386220 Rroxscaffold_7G00159400
rosa_rugosa Rorug01G0146800.1 Rorug01G0162100.1 Rorug01G0162200.1 Rorug01G0398600 Rorug01G0398700 Rorug02G0344200 Rorug02G0344300 Rorug02G0344400 Rorug03G0046200 Rorug03G0153200 Rorug04G0182500 Rorug04G0182600 Rorug05G0257700 Rorug05G0386400 Rorug05G0386400 Rorug05G0386500 Rorug05G0460900.1 Rorug05G0467000 Rorug07G0110400
rosa_samantha Rh1AG183500 Rh1AG416000 Rh1BG023600 Rh1BG145400 Rh1BG145500 Rh1BG278800 Rh1BG375400 Rh1CG389200 Rh1DG166300 Rh1DG176900 Rh1DG309900 Rh1DG406000 Rh2BG439100 Rh2BG502200 Rh2CG314800 Rh2CG517400 Rh2CG532000 Rh2DG449100 Rh3BG109900 Rh3CG230400 Rh3CG246600 Rh3CG289400 Rh3CG289500 Rh3DG120600 Rh4AG144400 Rh4AG408200 Rh4BG419300 Rh4CG101900 Rh4CG151000 Rh4CG226900 Rh4DG235400 Rh5AG265900 Rh5AG375200 Rh5CG559600 Rh5DG218200 Rh6AG074500 Rh6BG291800 Rh6CG292800 Rh6DG284900
rosa_wichuraiana Rw0G013240 Rw1G036490 Rw5G024920 Rw5G030730 Rw5G033710 Rw6G033840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1965
Acc65I GGTACC 1 cut(s) 2099
AccB1I GGYRCC 1 cut(s) 2099
AccB7I CCANNNNNTGG 1 cut(s) 716
AccI GTMKAC 3 cut(s) 697, 1131, 1367
AccII CGCG 1 cut(s) 1965
AciI CCGC 2 cut(s) 1965, 2052
AclWI GGATC 1 cut(s) 979
AcsI RAATTY 5 cut(s) 378, 1096, 1505, 1831, 2172
AcuI CTGAAG 1 cut(s) 1727
AcvI CACGTG 1 cut(s) 1928
AfaI GTAC 3 cut(s) 186, 1168, 2101
AfiI CCNNNNNNNGG 2 cut(s) 716, 792
AhlI ACTAGT 1 cut(s) 1673
AjnI CCWGG 2 cut(s) 2076, 2166
AluBI AGCT 9 cut(s) 35, 341, 515, 577, 758, 1379, 1655, 1901, 1946
AluI AGCT 9 cut(s) 35, 341, 515, 577, 758, 1379, 1655, 1901, 1946
Alw26I GTCTC 1 cut(s) 797
AlwI GGATC 1 cut(s) 979
Ama87I CYCGRG 2 cut(s) 1058, 1488
ApeKI GCWGC 5 cut(s) 574, 755, 863, 941, 2054
ApoI RAATTY 5 cut(s) 378, 1096, 1505, 1831, 2172
ArsI GACNNNNNNTTYG 2 cut(s) 903, 935
AseI ATTAAT 1 cut(s) 1286
Asp700I GAANNNNTTC 1 cut(s) 891
Asp718I GGTACC 1 cut(s) 2099
AspS9I GGNCC 1 cut(s) 1685
AsuHPI GGTGA 4 cut(s) 499, 1427, 1888, 1922
AvaI CYCGRG 2 cut(s) 1058, 1488
AvaII GGWCC 1 cut(s) 1685
BaeI ACNNNNGTAYC 4 cut(s) 2091, 2091, 2124, 2124
BanI GGYRCC 1 cut(s) 2099
BbrPI CACGTG 1 cut(s) 1928
BbvI GCAGC 5 cut(s) 586, 767, 875, 928, 2066
BccI CCATC 2 cut(s) 487, 1635
BceAI ACGGC 1 cut(s) 1557
BcgI CGANNNNNNTGC 4 cut(s) 5, 39, 1036, 1070
BciT130I CCWGG 2 cut(s) 2078, 2168
BclI TGATCA 1 cut(s) 594
BcoDI GTCTC 1 cut(s) 797
BcuI ACTAGT 1 cut(s) 1673
BfaI CTAG 4 cut(s) 873, 1218, 1674, 2039
BfmI CTRYAG 2 cut(s) 861, 1152
BisI GCNGC 6 cut(s) 575, 756, 864, 942, 2052, 2055
BlsI GCNGC 6 cut(s) 576, 757, 865, 943, 2053, 2056
Bme1390I CCNGG 2 cut(s) 2078, 2168
Bme18I GGWCC 1 cut(s) 1685
BmeT110I CYCGRG 2 cut(s) 1058, 1488
BmgT120I GGNCC 1 cut(s) 1685
BmiI GGNNCC 1 cut(s) 2101
BmrFI CCNGG 2 cut(s) 2078, 2168
BpmI CTGGAG 2 cut(s) 531, 2150
Bpu10I CCTNAGC 1 cut(s) 1656
Bsa29I ATCGAT 1 cut(s) 1639
BsaAI YACGTR 1 cut(s) 1928
Bsc4I CCNNNNNNNGG 2 cut(s) 716, 792
Bse1I ACTGG 1 cut(s) 188
Bse3DI GCAATG 2 cut(s) 1587, 2212
BseBI CCWGG 2 cut(s) 2078, 2168
BseCI ATCGAT 1 cut(s) 1639
BseGI GGATG 4 cut(s) 592, 658, 1027, 1763
BseLI CCNNNNNNNGG 2 cut(s) 716, 792
BseMI GCAATG 2 cut(s) 1587, 2212
BseMII CTCAG 3 cut(s) 357, 1437, 1788
BseNI ACTGG 1 cut(s) 188
BseRI GAGGAG 1 cut(s) 1373
BseXI GCAGC 5 cut(s) 586, 767, 875, 928, 2066
BsgI GTGCAG 1 cut(s) 774
Bsh1236I CGCG 1 cut(s) 1965
Bsh1285I CGRYCG 1 cut(s) 1969
BshNI GGYRCC 1 cut(s) 2099
BshVI ATCGAT 1 cut(s) 1639
BsiEI CGRYCG 1 cut(s) 1969
BsiHKCI CYCGRG 2 cut(s) 1058, 1488
BslI CCNNNNNNNGG 2 cut(s) 716, 792
BsmAI GTCTC 1 cut(s) 797
BsoBI CYCGRG 2 cut(s) 1058, 1488
Bsp143I GATC 4 cut(s) 318, 594, 971, 1267
BspACI CCGC 2 cut(s) 1965, 2052
BspCNI CTCAG 3 cut(s) 358, 1438, 1787
BspDI ATCGAT 1 cut(s) 1639
BspFNI CGCG 1 cut(s) 1965
BspHI TCATGA 2 cut(s) 280, 988
BspLI GGNNCC 1 cut(s) 2101
BspMAI CTGCAG 2 cut(s) 865, 1156
BspPI GGATC 1 cut(s) 979
BspQI GCTCTTC 1 cut(s) 2200
BspT107I GGYRCC 1 cut(s) 2099
BsrDI GCAATG 2 cut(s) 1587, 2212
BsrI ACTGG 1 cut(s) 188
BssMI GATC 4 cut(s) 318, 594, 971, 1267
BssNAI GTATAC 2 cut(s) 1132, 1368
Bst1107I GTATAC 2 cut(s) 1132, 1368
Bst2UI CCWGG 2 cut(s) 2078, 2168
Bst4CI ACNGT 3 cut(s) 397, 742, 1951
Bst6I CTCTTC 3 cut(s) 1394, 1997, 2200
BstAPI GCANNNNNTGC 2 cut(s) 869, 1769
BstBAI YACGTR 1 cut(s) 1928
BstC8I GCNNGC 1 cut(s) 354
BstDEI CTNAG 5 cut(s) 366, 1446, 1656, 1774, 2090
BstEII GGTNACC 1 cut(s) 143
BstF5I GGATG 4 cut(s) 592, 658, 1027, 1763
BstFNI CGCG 1 cut(s) 1965
BstKTI GATC 4 cut(s) 321, 597, 974, 1270
BstMAI GTCTC 1 cut(s) 797
BstMBI GATC 4 cut(s) 318, 594, 971, 1267
BstMCI CGRYCG 1 cut(s) 1969
BstMWI GCNNNNNNNGC 6 cut(s) 32, 362, 869, 1063, 1769, 2048
BstNI CCWGG 2 cut(s) 2078, 2168
BstNSI RCATGY 2 cut(s) 356, 1355
BstPI GGTNACC 1 cut(s) 143
BstSCI CCNGG 2 cut(s) 2076, 2166
BstSFI CTRYAG 2 cut(s) 861, 1152
BstUI CGCG 1 cut(s) 1965
BstV1I GCAGC 5 cut(s) 586, 767, 875, 928, 2066
BstZ17I GTATAC 2 cut(s) 1132, 1368
Bsu15I ATCGAT 1 cut(s) 1639
BsuTUI ATCGAT 1 cut(s) 1639
BtgZI GCGATG 1 cut(s) 833
BtsCI GGATG 4 cut(s) 592, 658, 1027, 1763
BtsIMutI CAGTG 1 cut(s) 747
Cac8I GCNNGC 1 cut(s) 354
CciI TCATGA 2 cut(s) 280, 988
Cfr13I GGNCC 1 cut(s) 1685
ClaI ATCGAT 1 cut(s) 1639
Csp6I GTAC 3 cut(s) 185, 1167, 2100
CviQI GTAC 3 cut(s) 185, 1167, 2100
DdeI CTNAG 5 cut(s) 366, 1446, 1656, 1774, 2090
DpnI GATC 4 cut(s) 320, 596, 973, 1269
DpnII GATC 4 cut(s) 318, 594, 971, 1267
DraI TTTAAA 1 cut(s) 1984
DrdI GACNNNNNNGTC 1 cut(s) 1965
DseDI GACNNNNNNGTC 1 cut(s) 1965
Eam1104I CTCTTC 3 cut(s) 1394, 1997, 2200
EarI CTCTTC 3 cut(s) 1394, 1997, 2200
Eco47I GGWCC 1 cut(s) 1685
Eco57I CTGAAG 1 cut(s) 1727
Eco72I CACGTG 1 cut(s) 1928
Eco88I CYCGRG 2 cut(s) 1058, 1488
Eco91I GGTNACC 1 cut(s) 143
EcoO65I GGTNACC 1 cut(s) 143
EcoRII CCWGG 2 cut(s) 2076, 2166
EcoT22I ATGCAT 1 cut(s) 1873
FalI AAGNNNNNCTT 2 cut(s) 1977, 2009
FauNDI CATATG 2 cut(s) 216, 309
FbaI TGATCA 1 cut(s) 594
FblI GTMKAC 3 cut(s) 697, 1131, 1367
Fnu4HI GCNGC 6 cut(s) 575, 756, 864, 942, 2052, 2055
FokI GGATG 4 cut(s) 599, 665, 1034, 1750
Fsp4HI GCNGC 6 cut(s) 575, 756, 864, 942, 2052, 2055
FspBI CTAG 4 cut(s) 873, 1218, 1674, 2039
GluI GCNGC 6 cut(s) 575, 756, 864, 942, 2052, 2055
GsuI CTGGAG 2 cut(s) 531, 2150
HindIII AAGCTT 1 cut(s) 1377
HinfI GANTC 9 cut(s) 271, 433, 782, 955, 1386, 1614, 1879, 2081, 2182
HphI GGTGA 4 cut(s) 499, 1427, 1888, 1922
Hpy166II GTNNAC 4 cut(s) 698, 1132, 1169, 1368
Hpy188I TCNGA 6 cut(s) 16, 462, 1447, 1707, 1777, 1891
Hpy8I GTNNAC 4 cut(s) 698, 1132, 1169, 1368
HpyAV CCTTC 7 cut(s) 134, 477, 1069, 1901, 1991, 2083, 2204
HpyCH4III ACNGT 3 cut(s) 397, 742, 1951
HpyCH4IV ACGT 3 cut(s) 1174, 1335, 1927
HpyF10VI GCNNNNNNNGC 6 cut(s) 32, 362, 869, 1063, 1769, 2048
HpyF3I CTNAG 5 cut(s) 366, 1446, 1656, 1774, 2090
HpySE526I ACGT 3 cut(s) 1174, 1335, 1927
KpnI GGTACC 1 cut(s) 2103
Ksp22I TGATCA 1 cut(s) 594
Kzo9I GATC 4 cut(s) 318, 594, 971, 1267
LguI GCTCTTC 1 cut(s) 2200
LmnI GCTCC 6 cut(s) 512, 712, 815, 1665, 1898, 2169
Lsp1109I GCAGC 5 cut(s) 586, 767, 875, 928, 2066
MaeI CTAG 4 cut(s) 873, 1218, 1674, 2039
MaeII ACGT 3 cut(s) 1174, 1335, 1927
MaeIII GTNAC 3 cut(s) 143, 190, 898
MalI GATC 4 cut(s) 320, 596, 973, 1269
MboI GATC 4 cut(s) 318, 594, 971, 1267
MfeI CAATTG 1 cut(s) 867
MlyI GAGTC 4 cut(s) 791, 964, 1380, 2090
MmeI TCCRAC 3 cut(s) 400, 1572, 1933
Mph1103I ATGCAT 1 cut(s) 1873
MroXI GAANNNNTTC 1 cut(s) 891
MslI CAYNNNNRTG 3 cut(s) 279, 357, 2159
MspR9I CCNGG 2 cut(s) 2078, 2168
MunI CAATTG 1 cut(s) 867
MvaI CCWGG 2 cut(s) 2078, 2168
MvnI CGCG 1 cut(s) 1965
MwoI GCNNNNNNNGC 6 cut(s) 32, 362, 869, 1063, 1769, 2048
NdeI CATATG 2 cut(s) 216, 309
NdeII GATC 4 cut(s) 318, 594, 971, 1267
NlaIV GGNNCC 1 cut(s) 2101
NmuCI GTSAC 1 cut(s) 898
NsiI ATGCAT 1 cut(s) 1873
NspI RCATGY 2 cut(s) 356, 1355
PaeI GCATGC 1 cut(s) 356
PaeR7I CTCGAG 2 cut(s) 1058, 1488
PagI TCATGA 2 cut(s) 280, 988
PciSI GCTCTTC 1 cut(s) 2200
PcsI WCGNNNNNNNCGW 1 cut(s) 1750
PdmI GAANNNNTTC 1 cut(s) 891
PfeI GAWTC 5 cut(s) 271, 433, 1614, 1879, 2182
PflMI CCANNNNNTGG 1 cut(s) 716
PfoI TCCNGGA 2 cut(s) 2076, 2166
PkrI GCNGC 6 cut(s) 576, 757, 865, 943, 2053, 2056
PleI GAGTC 4 cut(s) 790, 963, 1380, 2089
PmaCI CACGTG 1 cut(s) 1928
PmlI CACGTG 1 cut(s) 1928
PpsI GAGTC 4 cut(s) 790, 963, 1380, 2089
Ppu21I YACGTR 1 cut(s) 1928
PshBI ATTAAT 1 cut(s) 1286
Psp6I CCWGG 2 cut(s) 2076, 2166
PspCI CACGTG 1 cut(s) 1928
PspEI GGTNACC 1 cut(s) 143
PspGI CCWGG 2 cut(s) 2076, 2166
PspN4I GGNNCC 1 cut(s) 2101
PspPI GGNCC 1 cut(s) 1685
PstI CTGCAG 2 cut(s) 865, 1156
RsaI GTAC 3 cut(s) 186, 1168, 2101
RsaNI GTAC 3 cut(s) 185, 1167, 2100
RseI CAYNNNNRTG 3 cut(s) 279, 357, 2159
SapI GCTCTTC 1 cut(s) 2200
SatI GCNGC 6 cut(s) 575, 756, 864, 942, 2052, 2055
Sau3AI GATC 4 cut(s) 318, 594, 971, 1267
Sau96I GGNCC 1 cut(s) 1685
SchI GAGTC 4 cut(s) 791, 964, 1380, 2090
ScrFI CCNGG 2 cut(s) 2078, 2168
SfcI CTRYAG 2 cut(s) 861, 1152
Sfr274I CTCGAG 2 cut(s) 1058, 1488
SinI GGWCC 1 cut(s) 1685
SlaI CTCGAG 2 cut(s) 1058, 1488
SmiMI CAYNNNNRTG 3 cut(s) 279, 357, 2159
SmlI CTYRAG 2 cut(s) 1058, 1488
SmoI CTYRAG 2 cut(s) 1058, 1488
SpeI ACTAGT 1 cut(s) 1673
SphI GCATGC 1 cut(s) 356
SsiI CCGC 2 cut(s) 1965, 2052
SspI AATATT 2 cut(s) 604, 1195
SspMI CTAG 4 cut(s) 873, 1218, 1674, 2039
StyD4I CCNGG 2 cut(s) 2076, 2166
TaaI ACNGT 3 cut(s) 397, 742, 1951
TaiI ACGT 3 cut(s) 1177, 1338, 1930
TaqI TCGA 7 cut(s) 475, 1046, 1059, 1270, 1489, 1639, 1715
TatI WGTACW 1 cut(s) 1166
TauI GCSGC 1 cut(s) 2054
TfiI GAWTC 5 cut(s) 271, 433, 1614, 1879, 2182
TscAI CASTG 1 cut(s) 747
TseFI GTSAC 1 cut(s) 898
TseI GCWGC 5 cut(s) 574, 755, 863, 941, 2054
Tsp45I GTSAC 1 cut(s) 898
TspGWI ACGGA 2 cut(s) 255, 984
TspRI CASTG 1 cut(s) 747
Van91I CCANNNNNTGG 1 cut(s) 716
VpaK11BI GGWCC 1 cut(s) 1685
VspI ATTAAT 1 cut(s) 1286
XapI RAATTY 5 cut(s) 378, 1096, 1505, 1831, 2172
XceI RCATGY 2 cut(s) 356, 1355
XhoI CTCGAG 2 cut(s) 1058, 1488
XmiI GTMKAC 3 cut(s) 697, 1131, 1367
XmnI GAANNNNTTC 1 cut(s) 891
XspI CTAG 4 cut(s) 873, 1218, 1674, 2039
Zsp2I ATGCAT 1 cut(s) 1873
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.