Rh1DG309900

Protein FAR1-RELATED SEQUENCE 5-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Forward (+)
53708743 .. 53712103
3361 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG309900.1

Sequence Viewer

Length: 2547 bp
ATGGATACCATCTCTGACGAACAGACGCTTGGACAGGAGGTTACAAAGAATACAGAATGTATAAGTAATGAGTTATTAAGTGGTAGTGAAGTTGCTTTTCCAGATGAGAATGAATTCAGTTTGCAATGTAATGATGAGTTCAGTTTGCTGGGTGAGAGTGAAATCGATTTGCAAGGTGAGGAAGAAGATGATTTAGTAAGCGAAGATGAAGTTGATGTGCAACCTGAGGAGACTTTTCAATCAAGAAGTAATGATTCTTTTTTAAACTCAAATGAAGACAAAGAGAAGAAAGAAGAACTATATATCGGAATGGAGTTTAGTTCCGATGAGAGTGCATATAGAGCTTATGCTAAATATGGAGGAAAATCTGGTTTCAATGTGAGGAAACAACGCAGGACAAGAAACAAGAATGGTTTGGTTGTTAGGTTAGTTTATTGTTGCTCAAAAGAAGGTTACCGAAAGACCAAAACAAAGGGGGAAACATCTTATTCAGTACCAGTTACAAGGGTCGGTTGTAAAGCCCATATGAGTTGCTATCGTCAAAACAACGGAAAATTAAAGATTGTGTCGTTTGAGAGGAATCATAATCATGAGTTGATTAAAACACCTATGAAGCATATGTTAAAGATCAATAGAAGTTTCTCTAAAGCTCAAAAAGAGCATGCTGATGATGCTGAGATGTCAGGAATTTCAGCAAAAGCAACAGTTGAATTGATGAGTAGAGAAGTTGGAGGACGAGAGAATCTTGGTTTTATGGAAAAGGACTATCGGAATTACATACATCGAAAGCGAAGGGTGAAGATGGAAAAGGGAGATGCTGGAGCTATATTGCAATACTTCCAAAAAATGAAAGAGGATAATTCATCTTCTTTTTATTCAATGCAGCTTGATGAGGATGATATGATCACAAATATTTTTTGGGCAGATGAGCGTTCAATAAGTGATTATGGTCTTTTTGGGGATGTCGTTTGTTTTGACACAACTTATCAAACTAATGAATATGGTAGACCATTTGCTCCATTTGTTGGGGTCAATCATCATAAGCAAACAGTGGTGTTTGGTGCAGCTCTATTATATGACGAAACCATTGAGTCCTTTAAGTGGCTTTTTGAGACTTTTCTTGGAGCGATGTCTGGAAAGCAACCAAAGACCATACTTACAGACCAATCTGCAGCAATTGCTAGTGCAATAGCAGAAGTATTTCCTGTCACTTATCATAGACTATGTATTTGGCATATTTACCAAAATGCTGCAAAGAGATTGAGTCATGTGTTTCACGGATCACAACAATTTGCTCATGATTTTGGAAAGTGTGTATATGACTATGAGGATGAAGATGATTGGTTTTTAGCATCGAATAATATGCTCGAGAAGCACAATTTGAAGGAGGATAAATGGTTAAAGAATTTGTTTGATGTGAGAGAAAAATGGGCATTGGTATACGGGCGACATACTTTTACTGCAGATATGATGAGTACACAACGTAGTGAGAGTATGAATAATATTTTGAAAAAATACTTGAAGCCTAGTTATGACCTGTTGTGCTTCTTTGAACACTATGAGAGAGTTTTGGCTGATCGAAGATATGAAGAATTAATTGCTGACTTCAAGATGATGCAAACTTCTCCTGTGTTATCTGCTAACGTAGAGATGTTGCAACATGCAGAGGAGGTGTATACCCCAGAAGCTTTTAGACTCTTCCAGCAACAATACACAAGTATTGGTGATTATGTTGCTAATAAAGTTAGCAAGTCTGAGATGCAATATGAATACAAAGTATCTTATCGTGGTGTTGCTCGAGAGCATTTGGTAAAATTTGATGCTTCAATGCAAACAATAACTTGTAGTTGCATGAAGTTTAATTTTGTTGGGATTTTATGCCGTCATGCAATGAAAGTGTTGGATAGGAAGAATGTGAGAAGAATCCCTCCTACTTGCATATTAAATCGATGGAGTAAAGAAGCTAAGGCAAGGAGCATCACTAGTTATCATGGACCAAAGACTAATGAAAATCTGAAGCAGTCGATTGGAAAGCGATACAGCCATTTGTGTCGTAATTATCGTGAGATTGCATCCTTTGCCTCAGAACATGAGGAACTAACAAGGTATGCAAATGAATATGCCATTGAGTTGCTTAAAAATTTGGAAGAAAAGAAGAAGAAAGTGTTGAAAGAAGATGCATGGGTGATTCAAACATCAGATATTGGAGCTTTAGAAGGTGAAGTATCAAATGCACGTGGAGTTAAAAGAAAAGCTACTGTTGGACGACCACGCGGTCGTCATGGTAGATTTAAAGGTGTTCTTGAAGGGAAGAGTTGTAAAGCCACATCTAAAGCATCAACATCTCTAGCAAGTAAAGCCGCAGCAAAGAAACAACTATCCTTCCAGGAGTCCAATCTTAGTGCTGGTACCCAAGTATCAGTTTATGGCACAGGTCTAACTTTGCAGAACGACTTTTCTTTCACTCAAATGCTCCAGGAAATTTCAATGAATCATATTTGCTCTTCACAAAGCAATGAAGGAGGCAAAGAGCAGTCTGGAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

848

Amino Acids

97.29

Weight (kDa)

6.8

Isoelectric Point (pI)

43.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 116 - 200 6.6e-18 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 282 - 402 2.2e-10 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 322 - 416 1.7e-31 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000325)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g24391 FvH4_2g38071 FvH4_3g07131 FvH4_3g22481 FvH4_4g15809 FvH4_5g37230 FvH4_7g25201 FvH4_7g29092 FvH4_7g29093
malus_domestica MD01G1197600.v1.1 MD17G1186900.v1.1
prunus_persica Prupe.1G227400_v2.0.a1 Prupe.2G291000_v2.0.a1 Prupe.4G268600_v2.0.a1 Prupe.5G094100_v2.0.a1
pyrus_communis pycom01g20780 pycom17g19620
rosa_chinensis RchiOBHm_Chr1g0376821 RchiOBHm_Chr5g0061941 RchiOBHm_Chr5g0078991 RchiOBHm_Chr6g0276821 RchiOBHm_Chr7g0191321
rosa_laevigata RLG00000007883 RLG00000008804 RLG00000010632 RLG00000026567 RLG00000035244 RLG00000036018 RLG00000036909
rosa_multiflora Rmu_sc0001036.1_g000026 Rmu_sc0001556.1_g000021 Rmu_sc0001974.1_g000022 Rmu_sc0002113.1_g000006 Rmu_sc0002572.1_g000008 Rmu_sc0004808.1_g000011 Rmu_sc0005117.1_g000017 Rmu_sc0005319.1_g000016 Rmu_sc0008432.1_g000005 Rmu_sc0010475.1_g000001 Rmu_sc0015522.1_g000003 Rmu_ssc0000066.1_g000009 Rmu_ssc0000400.1_g000102 Rmu_ssc0000400.1_g000103
rosa_roxburghii Rroxscaffold_1G00071290 Rroxscaffold_2G00141280 Rroxscaffold_3G00233790 Rroxscaffold_4G00297530 Rroxscaffold_5G00368860 Rroxscaffold_5G00386220 Rroxscaffold_7G00159400
rosa_rugosa Rorug01G0146800.1 Rorug01G0162100.1 Rorug01G0162200.1 Rorug01G0398600 Rorug01G0398700 Rorug02G0344200 Rorug02G0344300 Rorug02G0344400 Rorug03G0046200 Rorug03G0153200 Rorug04G0182500 Rorug04G0182600 Rorug05G0257700 Rorug05G0386400 Rorug05G0386400 Rorug05G0386500 Rorug05G0460900.1 Rorug05G0467000 Rorug07G0110400
rosa_samantha Rh1AG183500 Rh1AG416000 Rh1BG023600 Rh1BG145400 Rh1BG145500 Rh1BG278800 Rh1BG375400 Rh1CG389200 Rh1DG166300 Rh1DG176900 Rh1DG309900 Rh1DG406000 Rh2BG439100 Rh2BG502200 Rh2CG314800 Rh2CG517400 Rh2CG532000 Rh2DG449100 Rh3BG109900 Rh3CG230400 Rh3CG246600 Rh3CG289400 Rh3CG289500 Rh3DG120600 Rh4AG144400 Rh4AG408200 Rh4BG419300 Rh4CG101900 Rh4CG151000 Rh4CG226900 Rh4DG235400 Rh5AG265900 Rh5AG375200 Rh5CG559600 Rh5DG218200 Rh6AG074500 Rh6BG291800 Rh6CG292800 Rh6DG284900
rosa_wichuraiana Rw0G013240 Rw1G036490 Rw5G024920 Rw5G030730 Rw5G033710 Rw6G033840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2274
Acc65I GGTACC 1 cut(s) 2408
AccB1I GGYRCC 1 cut(s) 2408
AccB7I CCANNNNNTGG 1 cut(s) 1025
AccI GTMKAC 3 cut(s) 1006, 1440, 1676
AccII CGCG 1 cut(s) 2274
AciI CCGC 2 cut(s) 2274, 2361
AclWI GGATC 1 cut(s) 1288
AcsI RAATTY 6 cut(s) 113, 687, 1405, 1814, 2140, 2481
AcuI CTGAAG 1 cut(s) 2036
AcvI CACGTG 1 cut(s) 2237
AfaI GTAC 3 cut(s) 495, 1477, 2410
AfiI CCNNNNNNNGG 2 cut(s) 1025, 1101
AhlI ACTAGT 1 cut(s) 1982
AjnI CCWGG 2 cut(s) 2385, 2475
AjuI GAANNNNNNNTTGG 2 cut(s) 12, 44
AluBI AGCT 9 cut(s) 344, 650, 824, 886, 1067, 1688, 1964, 2210, 2255
AluI AGCT 9 cut(s) 344, 650, 824, 886, 1067, 1688, 1964, 2210, 2255
Alw26I GTCTC 2 cut(s) 224, 1106
AlwI GGATC 1 cut(s) 1288
Ama87I CYCGRG 2 cut(s) 1367, 1797
ApeKI GCWGC 5 cut(s) 883, 1064, 1172, 1250, 2363
ApoI RAATTY 6 cut(s) 113, 687, 1405, 1814, 2140, 2481
ArsI GACNNNNNNTTYG 2 cut(s) 1212, 1244
AseI ATTAAT 1 cut(s) 1595
Asp700I GAANNNNTTC 2 cut(s) 113, 1200
Asp718I GGTACC 1 cut(s) 2408
AspS9I GGNCC 1 cut(s) 1994
AsuHPI GGTGA 6 cut(s) 164, 188, 808, 1736, 2197, 2231
AvaI CYCGRG 2 cut(s) 1367, 1797
AvaII GGWCC 1 cut(s) 1994
AxyI CCTNAGG 1 cut(s) 225
BaeI ACNNNNGTAYC 4 cut(s) 2400, 2400, 2433, 2433
BanI GGYRCC 1 cut(s) 2408
BbrPI CACGTG 1 cut(s) 2237
BbsI GAAGAC 1 cut(s) 282
BbvI GCAGC 5 cut(s) 895, 1076, 1184, 1237, 2375
BccI CCATC 3 cut(s) 17, 796, 1944
BceAI ACGGC 1 cut(s) 1866
BcgI CGANNNNNNTGC 4 cut(s) 314, 348, 1345, 1379
BciT130I CCWGG 2 cut(s) 2387, 2477
BclI TGATCA 1 cut(s) 903
BcoDI GTCTC 2 cut(s) 224, 1106
BcuI ACTAGT 1 cut(s) 1982
BfaI CTAG 4 cut(s) 1182, 1527, 1983, 2348
BfmI CTRYAG 2 cut(s) 1170, 1461
BisI GCNGC 6 cut(s) 884, 1065, 1173, 1251, 2361, 2364
BlsI GCNGC 6 cut(s) 885, 1066, 1174, 1252, 2362, 2365
Bme1390I CCNGG 2 cut(s) 2387, 2477
Bme18I GGWCC 1 cut(s) 1994
BmeT110I CYCGRG 2 cut(s) 1367, 1797
BmgT120I GGNCC 1 cut(s) 1994
BmiI GGNNCC 1 cut(s) 2410
BmrFI CCNGG 2 cut(s) 2387, 2477
BpiI GAAGAC 1 cut(s) 282
BpmI CTGGAG 2 cut(s) 840, 2459
Bpu10I CCTNAGC 1 cut(s) 1965
Bsa29I ATCGAT 2 cut(s) 165, 1948
BsaAI YACGTR 1 cut(s) 2237
Bsc4I CCNNNNNNNGG 2 cut(s) 1025, 1101
Bse1I ACTGG 1 cut(s) 497
Bse21I CCTNAGG 1 cut(s) 225
Bse3DI GCAATG 3 cut(s) 131, 1896, 2521
BseBI CCWGG 2 cut(s) 2387, 2477
BseCI ATCGAT 2 cut(s) 165, 1948
BseGI GGATG 4 cut(s) 901, 967, 1336, 2072
BseLI CCNNNNNNNGG 2 cut(s) 1025, 1101
BseMI GCAATG 3 cut(s) 131, 1896, 2521
BseMII CTCAG 4 cut(s) 216, 666, 1746, 2097
BseNI ACTGG 1 cut(s) 497
BseRI GAGGAG 2 cut(s) 242, 1682
BseXI GCAGC 5 cut(s) 895, 1076, 1184, 1237, 2375
BseYI CCCAGC 1 cut(s) 148
BsgI GTGCAG 1 cut(s) 1083
Bsh1236I CGCG 1 cut(s) 2274
Bsh1285I CGRYCG 1 cut(s) 2278
BshNI GGYRCC 1 cut(s) 2408
BshVI ATCGAT 2 cut(s) 165, 1948
BsiEI CGRYCG 1 cut(s) 2278
BsiHKCI CYCGRG 2 cut(s) 1367, 1797
BslI CCNNNNNNNGG 2 cut(s) 1025, 1101
BsmAI GTCTC 2 cut(s) 224, 1106
BsoBI CYCGRG 2 cut(s) 1367, 1797
Bsp143I GATC 4 cut(s) 627, 903, 1280, 1576
BspACI CCGC 2 cut(s) 2274, 2361
BspCNI CTCAG 4 cut(s) 217, 667, 1747, 2096
BspDI ATCGAT 2 cut(s) 165, 1948
BspFNI CGCG 1 cut(s) 2274
BspHI TCATGA 2 cut(s) 589, 1297
BspLI GGNNCC 1 cut(s) 2410
BspMAI CTGCAG 2 cut(s) 1174, 1465
BspPI GGATC 1 cut(s) 1288
BspQI GCTCTTC 1 cut(s) 2509
BspT107I GGYRCC 1 cut(s) 2408
BsrDI GCAATG 3 cut(s) 131, 1896, 2521
BsrI ACTGG 1 cut(s) 497
BssMI GATC 4 cut(s) 627, 903, 1280, 1576
BssNAI GTATAC 2 cut(s) 1441, 1677
Bst1107I GTATAC 2 cut(s) 1441, 1677
Bst2UI CCWGG 2 cut(s) 2387, 2477
Bst4CI ACNGT 3 cut(s) 706, 1051, 2260
Bst6I CTCTTC 3 cut(s) 1703, 2306, 2509
BstAPI GCANNNNNTGC 2 cut(s) 1178, 2078
BstBAI YACGTR 1 cut(s) 2237
BstC8I GCNNGC 1 cut(s) 663
BstDEI CTNAG 6 cut(s) 225, 675, 1755, 1965, 2083, 2399
BstEII GGTNACC 1 cut(s) 452
BstF5I GGATG 4 cut(s) 901, 967, 1336, 2072
BstFNI CGCG 1 cut(s) 2274
BstKTI GATC 4 cut(s) 630, 906, 1283, 1579
BstMAI GTCTC 2 cut(s) 224, 1106
BstMBI GATC 4 cut(s) 627, 903, 1280, 1576
BstMCI CGRYCG 1 cut(s) 2278
BstMWI GCNNNNNNNGC 6 cut(s) 341, 671, 1178, 1372, 2078, 2357
BstNI CCWGG 2 cut(s) 2387, 2477
BstNSI RCATGY 2 cut(s) 665, 1664
BstPI GGTNACC 1 cut(s) 452
BstSCI CCNGG 2 cut(s) 2385, 2475
BstSFI CTRYAG 2 cut(s) 1170, 1461
BstUI CGCG 1 cut(s) 2274
BstV1I GCAGC 5 cut(s) 895, 1076, 1184, 1237, 2375
BstV2I GAAGAC 1 cut(s) 282
BstZ17I GTATAC 2 cut(s) 1441, 1677
Bsu15I ATCGAT 2 cut(s) 165, 1948
Bsu36I CCTNAGG 1 cut(s) 225
BsuTUI ATCGAT 2 cut(s) 165, 1948
BtgZI GCGATG 1 cut(s) 1142
BtsCI GGATG 4 cut(s) 901, 967, 1336, 2072
BtsIMutI CAGTG 1 cut(s) 1056
Cac8I GCNNGC 1 cut(s) 663
CciI TCATGA 2 cut(s) 589, 1297
Cfr13I GGNCC 1 cut(s) 1994
ClaI ATCGAT 2 cut(s) 165, 1948
CseI GACGC 1 cut(s) 34
Csp6I GTAC 3 cut(s) 494, 1476, 2409
CviQI GTAC 3 cut(s) 494, 1476, 2409
DdeI CTNAG 6 cut(s) 225, 675, 1755, 1965, 2083, 2399
DpnI GATC 4 cut(s) 629, 905, 1282, 1578
DpnII GATC 4 cut(s) 627, 903, 1280, 1576
DraI TTTAAA 2 cut(s) 264, 2293
DrdI GACNNNNNNGTC 1 cut(s) 2274
DseDI GACNNNNNNGTC 1 cut(s) 2274
Eam1104I CTCTTC 3 cut(s) 1703, 2306, 2509
EarI CTCTTC 3 cut(s) 1703, 2306, 2509
Eco47I GGWCC 1 cut(s) 1994
Eco57I CTGAAG 1 cut(s) 2036
Eco72I CACGTG 1 cut(s) 2237
Eco81I CCTNAGG 1 cut(s) 225
Eco88I CYCGRG 2 cut(s) 1367, 1797
Eco91I GGTNACC 1 cut(s) 452
EcoO65I GGTNACC 1 cut(s) 452
EcoRI GAATTC 1 cut(s) 113
EcoRII CCWGG 2 cut(s) 2385, 2475
EcoT22I ATGCAT 1 cut(s) 2182
FalI AAGNNNNNCTT 2 cut(s) 2286, 2318
FauNDI CATATG 2 cut(s) 525, 618
FbaI TGATCA 1 cut(s) 903
FblI GTMKAC 3 cut(s) 1006, 1440, 1676
Fnu4HI GCNGC 6 cut(s) 884, 1065, 1173, 1251, 2361, 2364
FokI GGATG 4 cut(s) 908, 974, 1343, 2059
Fsp4HI GCNGC 6 cut(s) 884, 1065, 1173, 1251, 2361, 2364
FspBI CTAG 4 cut(s) 1182, 1527, 1983, 2348
GluI GCNGC 6 cut(s) 884, 1065, 1173, 1251, 2361, 2364
GsaI CCCAGC 1 cut(s) 152
GsuI CTGGAG 2 cut(s) 840, 2459
HgaI GACGC 1 cut(s) 34
HindIII AAGCTT 1 cut(s) 1686
HphI GGTGA 6 cut(s) 164, 188, 808, 1736, 2197, 2231
Hpy166II GTNNAC 4 cut(s) 1007, 1441, 1478, 1677
Hpy188I TCNGA 8 cut(s) 16, 308, 325, 771, 1756, 2016, 2086, 2200
Hpy8I GTNNAC 4 cut(s) 1007, 1441, 1478, 1677
HpyAV CCTTC 7 cut(s) 443, 786, 1378, 2210, 2300, 2392, 2513
HpyCH4III ACNGT 3 cut(s) 706, 1051, 2260
HpyCH4IV ACGT 3 cut(s) 1483, 1644, 2236
HpyF10VI GCNNNNNNNGC 6 cut(s) 341, 671, 1178, 1372, 2078, 2357
HpyF3I CTNAG 6 cut(s) 225, 675, 1755, 1965, 2083, 2399
HpySE526I ACGT 3 cut(s) 1483, 1644, 2236
KpnI GGTACC 1 cut(s) 2412
Ksp22I TGATCA 1 cut(s) 903
Kzo9I GATC 4 cut(s) 627, 903, 1280, 1576
LguI GCTCTTC 1 cut(s) 2509
LmnI GCTCC 6 cut(s) 821, 1021, 1124, 1974, 2207, 2478
Lsp1109I GCAGC 5 cut(s) 895, 1076, 1184, 1237, 2375
MaeI CTAG 4 cut(s) 1182, 1527, 1983, 2348
MaeII ACGT 3 cut(s) 1483, 1644, 2236
MaeIII GTNAC 4 cut(s) 40, 452, 499, 1207
MalI GATC 4 cut(s) 629, 905, 1282, 1578
MboI GATC 4 cut(s) 627, 903, 1280, 1576
MfeI CAATTG 1 cut(s) 1176
MlyI GAGTC 4 cut(s) 1100, 1273, 1689, 2399
MmeI TCCRAC 3 cut(s) 709, 1881, 2242
Mph1103I ATGCAT 1 cut(s) 2182
MroXI GAANNNNTTC 2 cut(s) 113, 1200
MslI CAYNNNNRTG 3 cut(s) 588, 666, 2468
MspR9I CCNGG 2 cut(s) 2387, 2477
MunI CAATTG 1 cut(s) 1176
MvaI CCWGG 2 cut(s) 2387, 2477
MvnI CGCG 1 cut(s) 2274
MwoI GCNNNNNNNGC 6 cut(s) 341, 671, 1178, 1372, 2078, 2357
NdeI CATATG 2 cut(s) 525, 618
NdeII GATC 4 cut(s) 627, 903, 1280, 1576
NlaIV GGNNCC 1 cut(s) 2410
NmuCI GTSAC 1 cut(s) 1207
NsiI ATGCAT 1 cut(s) 2182
NspI RCATGY 2 cut(s) 665, 1664
PaeI GCATGC 1 cut(s) 665
PaeR7I CTCGAG 2 cut(s) 1367, 1797
PagI TCATGA 2 cut(s) 589, 1297
PciSI GCTCTTC 1 cut(s) 2509
PcsI WCGNNNNNNNCGW 1 cut(s) 2059
PdmI GAANNNNTTC 2 cut(s) 113, 1200
PfeI GAWTC 6 cut(s) 254, 580, 742, 1923, 2188, 2491
PflMI CCANNNNNTGG 1 cut(s) 1025
PfoI TCCNGGA 2 cut(s) 2385, 2475
PkrI GCNGC 6 cut(s) 885, 1066, 1174, 1252, 2362, 2365
PleI GAGTC 4 cut(s) 1099, 1272, 1689, 2398
PmaCI CACGTG 1 cut(s) 2237
PmlI CACGTG 1 cut(s) 2237
PpsI GAGTC 4 cut(s) 1099, 1272, 1689, 2398
Ppu21I YACGTR 1 cut(s) 2237
PshBI ATTAAT 1 cut(s) 1595
Psp6I CCWGG 2 cut(s) 2385, 2475
PspCI CACGTG 1 cut(s) 2237
PspEI GGTNACC 1 cut(s) 452
PspFI CCCAGC 1 cut(s) 148
PspGI CCWGG 2 cut(s) 2385, 2475
PspN4I GGNNCC 1 cut(s) 2410
PspPI GGNCC 1 cut(s) 1994
PstI CTGCAG 2 cut(s) 1174, 1465
RsaI GTAC 3 cut(s) 495, 1477, 2410
RsaNI GTAC 3 cut(s) 494, 1476, 2409
RseI CAYNNNNRTG 3 cut(s) 588, 666, 2468
SapI GCTCTTC 1 cut(s) 2509
SatI GCNGC 6 cut(s) 884, 1065, 1173, 1251, 2361, 2364
Sau3AI GATC 4 cut(s) 627, 903, 1280, 1576
Sau96I GGNCC 1 cut(s) 1994
SchI GAGTC 4 cut(s) 1100, 1273, 1689, 2399
ScrFI CCNGG 2 cut(s) 2387, 2477
SfcI CTRYAG 2 cut(s) 1170, 1461
Sfr274I CTCGAG 2 cut(s) 1367, 1797
SinI GGWCC 1 cut(s) 1994
SlaI CTCGAG 2 cut(s) 1367, 1797
SmiMI CAYNNNNRTG 3 cut(s) 588, 666, 2468
SmlI CTYRAG 2 cut(s) 1367, 1797
SmoI CTYRAG 2 cut(s) 1367, 1797
SpeI ACTAGT 1 cut(s) 1982
SphI GCATGC 1 cut(s) 665
SsiI CCGC 2 cut(s) 2274, 2361
SspI AATATT 2 cut(s) 913, 1504
SspMI CTAG 4 cut(s) 1182, 1527, 1983, 2348
StyD4I CCNGG 2 cut(s) 2385, 2475
TaaI ACNGT 3 cut(s) 706, 1051, 2260
TaiI ACGT 3 cut(s) 1486, 1647, 2239
TaqI TCGA 8 cut(s) 165, 784, 1355, 1368, 1579, 1798, 1948, 2024
TatI WGTACW 1 cut(s) 1475
TauI GCSGC 1 cut(s) 2363
TfiI GAWTC 6 cut(s) 254, 580, 742, 1923, 2188, 2491
TscAI CASTG 1 cut(s) 1056
TseFI GTSAC 1 cut(s) 1207
TseI GCWGC 5 cut(s) 883, 1064, 1172, 1250, 2363
Tsp45I GTSAC 1 cut(s) 1207
TspGWI ACGGA 2 cut(s) 564, 1293
TspRI CASTG 1 cut(s) 1056
Van91I CCANNNNNTGG 1 cut(s) 1025
VpaK11BI GGWCC 1 cut(s) 1994
VspI ATTAAT 1 cut(s) 1595
XapI RAATTY 6 cut(s) 113, 687, 1405, 1814, 2140, 2481
XceI RCATGY 2 cut(s) 665, 1664
XhoI CTCGAG 2 cut(s) 1367, 1797
XmiI GTMKAC 3 cut(s) 1006, 1440, 1676
XmnI GAANNNNTTC 2 cut(s) 113, 1200
XspI CTAG 4 cut(s) 1182, 1527, 1983, 2348
Zsp2I ATGCAT 1 cut(s) 2182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.