Rh4AG408200

protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Forward (+)
70861202 .. 70866192
4991 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG408200.1

Sequence Viewer

Length: 2220 bp
ATGGATACCCAGAATTGTACGAGCTTGGGCAATCAACTAATAAGTGATTCCGAGGACTTACAAGGTAAAGAGCAGTGTGATGATTCTCATTGTGAGCCTACTGATGATTTGCATGTAGTGAATGAAATTGAAAACAATGAAGAGGCAATTGAAGAGGTCATACTTGGAAAAGAGTTTATAGATGTTGAGAGTGCATATAAGTTCTATAAGAATTATGGTGGCAAACATGGATTCAATGTGAGGATAAGAAACAGTAGAAAAAACAATGAGAATTTTGTGACATGGGTGCATTATTGTTGTGCAAAAGAAGGTTTTCGAGAAAAGGACAAGCGTCGTACAAATGCATCTTATTCTCAACCAGTTACAAGATGTGGTTGTCAAGCGCATCTGACCATCCTACTGCAGAAGAATGGAAATTTCCAAGTTGTCTCATTTCAGACGAGTCATAATCATGCATTGATTAGTACTCCAATGAAGCATTTGCTTAAGGTCAATAGAAGTATATCTGAGGCACAAAAAGCACATGCAGATGATGCTGAACATTCTGGTTTCTCCATCAAAGCAACTGTGGAGTTGATGAGTACAGAAGTAGGAGGGCCAGAGAACCTTGGATTTTCACAGAAGGACTACATGAATTACATACATAGAAAGCGAATGTCTAAAATGGAAAAGGGAGATGCAGGTGCTGTATTGCAGTACTTTCAAAAGATGCAATCTGAGAATTCGTCATATTTTTATTCAATCCAACTTGATGAGGATGACATGATCACAAACATATTTTGGGCTGATGCTCGATCGGTAAGTGATTATAGTCTGTTTGGAGATGTGCTTTGTTTTGATACGACATACAGGACAAATGAATATGGTCGACCCTTTGCACCGTTTGTTGGGGTTAATCATCATAAGCAAACAACATTGTTTGGTGCAGCTTTGTTATATGATGAAACAACCGAATCTTTTATCTGGTTATTTGAGACATTCCTCTCTGCTATGTCTGGTAAGCACCCAATGACCATTCTTACTGATCAGTCTGCTGCCATGGCTAGAGCAATAAAAGAAGTTTTTCCAAAAGCTACTCATCGCTTATGTGTGTGGCATCTTTATCAAAATGCTGCTAAGAATCTCAGTCATGTCTTTCATGGATCTTCAGAATTTGTTGATGATTTTAGCAATTGCATGTATGACTATGAGTTTGAGCATGAGTGGCTATTAGCATGGAATGGACTTCTTGAGAAATATGGCCTCAAGGAAAACAAGTGGTTGAATAATTTATTTGAATTGCGGGAAAAATGGGCACTAGTGTATGGGAGACATACTTTCACTGCCGATATGAAAAGCACACAGCGAAGTGAATGCATGAATAATGTGCTTAAGAAATATTTGAAGCCAGAGCATAATCTTTTGCGGTTTTTCGAACATTATGAAAGAGTTTTGGCTGATCGAAGATATCAAGAGTTGATTGCTGAATATAAGATGATACAAACAACTCCTGTCTTGGCAGTAAGTGCACATATGTTGCAACATGGAGCAGAGGTCTATACTCCAGAGGTTTTCTTGCTGTTTCAGAAAGAATTTGTGAGAATTCATAATTATAGTACTTACAAGGTTGGTAAGTCTGGGATGACATCAGAGTATATAGTATCATATAGTTCTGAACATAATGAGCACTTGGTCAAATATGAAGCTTCAACACAAAATGTTAATTGTAGTTGTAAAAAGTTCACGTTTGTTGGGATTTTGTGTGCTCATGCACTAAAAGTGCTTGACAAGAAGAATGTGAAGAAGATTCCACCGCAATACATTTTAAAGCGATGGACAAGAGAAGCAAAAATTATGAGTATTACTAGTTATCATCCTACTGAGATTCATGGTAATCCTAAGGAGTCGATTGGCAGACGGTATGGCTACTTGTGCCGCACTTCTCGTGATATTTTAACTGTTGCAGCAGATGATGAAGAGTTAACGAGATATGCACATGAATGTTTGGTTGAGATGCTCAAAGGCTTAGAGTTAATAAAGAAAAATCGCACTGAGAAAGAGGGGAGAAGTTCTAGTGATAGCAGCGAAGTGAATGCTACTTTTGGTCAAAGTGAAGAGGTTGAGGGAATAGTTCAATCTAATGCTTGTGAAACAACAATTATCTGTGGAGTTAAAAGAAAAGCTACAATTGGCCGTCCACGTACCAGATTCAAAGACCCGGCTGAAAGAAAAAAAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

739

Amino Acids

85.28

Weight (kDa)

6.69

Isoelectric Point (pI)

43.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 67 - 154 1e-20 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 237 - 359 4.2e-12 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 276 - 370 4.9e-32 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000325)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g24391 FvH4_2g38071 FvH4_3g07131 FvH4_3g22481 FvH4_4g15809 FvH4_5g37230 FvH4_7g25201 FvH4_7g29092 FvH4_7g29093
malus_domestica MD01G1197600.v1.1 MD17G1186900.v1.1
prunus_persica Prupe.1G227400_v2.0.a1 Prupe.2G291000_v2.0.a1 Prupe.4G268600_v2.0.a1 Prupe.5G094100_v2.0.a1
pyrus_communis pycom01g20780 pycom17g19620
rosa_chinensis RchiOBHm_Chr1g0376821 RchiOBHm_Chr5g0061941 RchiOBHm_Chr5g0078991 RchiOBHm_Chr6g0276821 RchiOBHm_Chr7g0191321
rosa_laevigata RLG00000007883 RLG00000008804 RLG00000010632 RLG00000026567 RLG00000035244 RLG00000036018 RLG00000036909
rosa_multiflora Rmu_sc0001036.1_g000026 Rmu_sc0001556.1_g000021 Rmu_sc0001974.1_g000022 Rmu_sc0002113.1_g000006 Rmu_sc0002572.1_g000008 Rmu_sc0004808.1_g000011 Rmu_sc0005117.1_g000017 Rmu_sc0005319.1_g000016 Rmu_sc0008432.1_g000005 Rmu_sc0010475.1_g000001 Rmu_sc0015522.1_g000003 Rmu_ssc0000066.1_g000009 Rmu_ssc0000400.1_g000102 Rmu_ssc0000400.1_g000103
rosa_roxburghii Rroxscaffold_1G00071290 Rroxscaffold_2G00141280 Rroxscaffold_3G00233790 Rroxscaffold_4G00297530 Rroxscaffold_5G00368860 Rroxscaffold_5G00386220 Rroxscaffold_7G00159400
rosa_rugosa Rorug01G0146800.1 Rorug01G0162100.1 Rorug01G0162200.1 Rorug01G0398600 Rorug01G0398700 Rorug02G0344200 Rorug02G0344300 Rorug02G0344400 Rorug03G0046200 Rorug03G0153200 Rorug04G0182500 Rorug04G0182600 Rorug05G0257700 Rorug05G0386400 Rorug05G0386400 Rorug05G0386500 Rorug05G0460900.1 Rorug05G0467000 Rorug07G0110400
rosa_samantha Rh1AG183500 Rh1AG416000 Rh1BG023600 Rh1BG145400 Rh1BG145500 Rh1BG278800 Rh1BG375400 Rh1CG389200 Rh1DG166300 Rh1DG176900 Rh1DG309900 Rh1DG406000 Rh2BG439100 Rh2BG502200 Rh2CG314800 Rh2CG517400 Rh2CG532000 Rh2DG449100 Rh3BG109900 Rh3CG230400 Rh3CG246600 Rh3CG289400 Rh3CG289500 Rh3DG120600 Rh4AG144400 Rh4AG408200 Rh4BG419300 Rh4CG101900 Rh4CG151000 Rh4CG226900 Rh4DG235400 Rh5AG265900 Rh5AG375200 Rh5CG559600 Rh5DG218200 Rh6AG074500 Rh6BG291800 Rh6CG292800 Rh6DG284900
rosa_wichuraiana Rw0G013240 Rw1G036490 Rw5G024920 Rw5G030730 Rw5G033710 Rw6G033840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 671
Acc36I ACCTGC 1 cut(s) 671
AccI GTMKAC 1 cut(s) 868
AciI CCGC 4 cut(s) 1282, 1405, 1793, 1915
AclWI GGATC 1 cut(s) 1150
AcoI YGGCCR 1 cut(s) 2170
AcsI RAATTY 6 cut(s) 271, 415, 721, 1151, 1571, 1581
AcuI CTGAAG 1 cut(s) 1131
AfaI GTAC 7 cut(s) 19, 337, 466, 583, 698, 1597, 2182
AfiI CCNNNNNNNGG 1 cut(s) 887
AflII CTTAAG 2 cut(s) 485, 1370
AhlI ACTAGT 2 cut(s) 1297, 1844
AluBI AGCT 5 cut(s) 24, 929, 1073, 1685, 2162
AluI AGCT 5 cut(s) 24, 929, 1073, 1685, 2162
Alw21I GWGCWC 3 cut(s) 1510, 1668, 1747
Alw26I GTCTC 3 cut(s) 433, 968, 1303
Alw44I GTGCAC 1 cut(s) 1506
AlwI GGATC 1 cut(s) 1150
AlwNI CAGNNNCTG 1 cut(s) 686
AoxI GGCC 3 cut(s) 596, 1240, 2170
ApaLI GTGCAC 1 cut(s) 1506
ApeKI GCWGC 5 cut(s) 926, 1034, 1112, 1943, 2061
ApoI RAATTY 6 cut(s) 271, 415, 721, 1151, 1571, 1581
ArsI GACNNNNNNTTYG 2 cut(s) 1175, 1207
Asp700I GAANNNNTTC 2 cut(s) 312, 1062
AspLEI GCGC 1 cut(s) 385
AspS9I GGNCC 1 cut(s) 596
AsuC2I CCSGG 1 cut(s) 2198
AsuII TTCGAA 1 cut(s) 1413
AxyI CCTNAGG 1 cut(s) 1878
BaeGI GKGCMC 2 cut(s) 1297, 1510
BarI GAAGNNNNNNTAC 2 cut(s) 144, 176
BauI CACGAG 1 cut(s) 1923
Bbv12I GWGCWC 3 cut(s) 1510, 1668, 1747
BbvI GCAGC 5 cut(s) 938, 1021, 1099, 1955, 2073
BccI CCATC 3 cut(s) 401, 563, 1806
BceAI ACGGC 1 cut(s) 2157
BcgI CGANNNNNNTGC 4 cut(s) 1335, 1369, 2054, 2088
BclI TGATCA 2 cut(s) 765, 1024
BcnI CCSGG 1 cut(s) 2198
BcoDI GTCTC 3 cut(s) 433, 968, 1303
BcuI ACTAGT 2 cut(s) 1297, 1844
BfaI CTAG 4 cut(s) 1044, 1298, 1845, 2052
BfmI CTRYAG 1 cut(s) 401
BfrI CTTAAG 2 cut(s) 485, 1370
BfuAI ACCTGC 1 cut(s) 671
BisI GCNGC 6 cut(s) 927, 1035, 1113, 1915, 1944, 2062
BlsI GCNGC 6 cut(s) 928, 1036, 1114, 1916, 1945, 2063
BmcAI AGTACT 3 cut(s) 466, 698, 1597
Bme1390I CCNGG 1 cut(s) 2198
BmgT120I GGNCC 1 cut(s) 596
BmrFI CCNGG 1 cut(s) 2198
BmsI GCATC 8 cut(s) 353, 394, 523, 667, 699, 778, 1105, 1983
BoxI GACNNNNGTC 1 cut(s) 330
BpmI CTGGAG 1 cut(s) 1527
Bpu14I TTCGAA 1 cut(s) 1413
BpuEI CTTGAG 2 cut(s) 1229, 1250
BpuMI CCSGG 1 cut(s) 2198
BsaAI YACGTR 1 cut(s) 2180
BsaJI CCNNGG 3 cut(s) 51, 607, 1038
BsaXI ACNNNNNCTCC 2 cut(s) 1518, 1548
Bsc4I CCNNNNNNNGG 1 cut(s) 887
Bse1I ACTGG 1 cut(s) 359
Bse21I CCTNAGG 1 cut(s) 1878
BseDI CCNNGG 3 cut(s) 51, 607, 1038
BseGI GGATG 4 cut(s) 393, 763, 1626, 1852
BseLI CCNNNNNNNGG 1 cut(s) 887
BseMII CTCAG 5 cut(s) 498, 708, 1138, 1851, 2022
BseNI ACTGG 1 cut(s) 359
BseSI GKGCMC 2 cut(s) 1297, 1510
BseXI GCAGC 5 cut(s) 938, 1021, 1099, 1955, 2073
BsgI GTGCAG 1 cut(s) 945
Bsh1285I CGRYCG 1 cut(s) 797
BshFI GGCC 3 cut(s) 598, 1242, 2172
BsiEI CGRYCG 1 cut(s) 797
BsiHKAI GWGCWC 3 cut(s) 1510, 1668, 1747
BsiSI CCGG 1 cut(s) 2198
BslI CCNNNNNNNGG 1 cut(s) 887
BsmAI GTCTC 3 cut(s) 433, 968, 1303
BsmI GAATGC 2 cut(s) 1358, 2077
BsnI GGCC 3 cut(s) 598, 1242, 2172
Bsp119I TTCGAA 1 cut(s) 1413
Bsp1286I GDGCHC 4 cut(s) 1297, 1510, 1668, 1747
Bsp143I GATC 5 cut(s) 765, 794, 1024, 1142, 1438
Bsp19I CCATGG 1 cut(s) 1038
BspACI CCGC 4 cut(s) 1282, 1405, 1793, 1915
BspANI GGCC 3 cut(s) 598, 1242, 2172
BspCNI CTCAG 5 cut(s) 499, 709, 1137, 1852, 2023
BspMAI CTGCAG 1 cut(s) 405
BspMI ACCTGC 1 cut(s) 671
BspPI GGATC 1 cut(s) 1150
BspT104I TTCGAA 1 cut(s) 1413
BspTI CTTAAG 2 cut(s) 485, 1370
BsrI ACTGG 1 cut(s) 359
BssECI CCNNGG 3 cut(s) 51, 607, 1038
BssMI GATC 5 cut(s) 765, 794, 1024, 1142, 1438
BssSI CACGAG 1 cut(s) 1923
BssT1I CCWWGG 2 cut(s) 607, 1038
Bst2BI CACGAG 1 cut(s) 1923
Bst4CI ACNGT 5 cut(s) 254, 568, 882, 1899, 1939
Bst6I CTCTTC 4 cut(s) 135, 147, 1950, 2088
BstAFI CTTAAG 2 cut(s) 485, 1370
BstAPI GCANNNNNTGC 2 cut(s) 533, 1505
BstBAI YACGTR 1 cut(s) 2180
BstBI TTCGAA 1 cut(s) 1413
BstDEI CTNAG 8 cut(s) 507, 717, 1116, 1124, 1860, 1878, 2005, 2031
BstDSI CCRYGG 1 cut(s) 1038
BstF5I GGATG 4 cut(s) 393, 763, 1626, 1852
BstHHI GCGC 1 cut(s) 385
BstKTI GATC 5 cut(s) 768, 797, 1027, 1145, 1441
BstMAI GTCTC 3 cut(s) 433, 968, 1303
BstMBI GATC 5 cut(s) 765, 794, 1024, 1142, 1438
BstMCI CGRYCG 1 cut(s) 797
BstMWI GCNNNNNNNGC 6 cut(s) 518, 533, 1040, 1204, 1505, 1911
BstNSI RCATGY 3 cut(s) 116, 527, 1180
BstPAI GACNNNNGTC 1 cut(s) 330
BstSCI CCNGG 1 cut(s) 2196
BstSFI CTRYAG 1 cut(s) 401
BstSLI GKGCMC 2 cut(s) 1297, 1510
BstV1I GCAGC 5 cut(s) 938, 1021, 1099, 1955, 2073
BstX2I RGATCY 1 cut(s) 1142
BstYI RGATCY 1 cut(s) 1142
Bsu36I CCTNAGG 1 cut(s) 1878
BsuRI GGCC 3 cut(s) 598, 1242, 2172
BtgI CCRYGG 1 cut(s) 1038
BtgZI GCGATG 2 cut(s) 1064, 1825
BtsCI GGATG 4 cut(s) 393, 763, 1626, 1852
BtsI GCAGTG 2 cut(s) 80, 1320
BtsIMutI CAGTG 3 cut(s) 80, 1320, 2028
BveI ACCTGC 1 cut(s) 671
CaiI CAGNNNCTG 1 cut(s) 686
CfoI GCGC 1 cut(s) 385
Cfr13I GGNCC 1 cut(s) 596
CseI GACGC 1 cut(s) 320
Csp6I GTAC 7 cut(s) 18, 336, 465, 582, 697, 1596, 2181
CviQI GTAC 7 cut(s) 18, 336, 465, 582, 697, 1596, 2181
DdeI CTNAG 8 cut(s) 507, 717, 1116, 1124, 1860, 1878, 2005, 2031
DpnI GATC 5 cut(s) 767, 796, 1026, 1144, 1440
DpnII GATC 5 cut(s) 765, 794, 1024, 1142, 1438
DraI TTTAAA 1 cut(s) 1806
EaeI YGGCCR 1 cut(s) 2170
Eam1104I CTCTTC 4 cut(s) 135, 147, 1950, 2088
EarI CTCTTC 4 cut(s) 135, 147, 1950, 2088
Eco130I CCWWGG 2 cut(s) 607, 1038
Eco32I GATATC 1 cut(s) 1448
Eco57I CTGAAG 1 cut(s) 1131
Eco81I CCTNAGG 1 cut(s) 1878
EcoRI GAATTC 2 cut(s) 721, 1581
EcoRV GATATC 1 cut(s) 1448
EcoT14I CCWWGG 2 cut(s) 607, 1038
EcoT22I ATGCAT 3 cut(s) 346, 457, 1358
ErhI CCWWGG 2 cut(s) 607, 1038
FauI CCCGC 1 cut(s) 1275
FauNDI CATATG 1 cut(s) 1512
FbaI TGATCA 2 cut(s) 765, 1024
FblI GTMKAC 1 cut(s) 868
Fnu4HI GCNGC 6 cut(s) 927, 1035, 1113, 1915, 1944, 2062
FokI GGATG 4 cut(s) 380, 770, 1633, 1839
Fsp4HI GCNGC 6 cut(s) 927, 1035, 1113, 1915, 1944, 2062
FspBI CTAG 4 cut(s) 1044, 1298, 1845, 2052
GlaI GCGC 1 cut(s) 384
GluI GCNGC 6 cut(s) 927, 1035, 1113, 1915, 1944, 2062
GsuI CTGGAG 1 cut(s) 1527
HaeIII GGCC 3 cut(s) 598, 1242, 2172
HapII CCGG 1 cut(s) 2198
HgaI GACGC 1 cut(s) 320
HhaI GCGC 1 cut(s) 385
Hin6I GCGC 1 cut(s) 383
HinP1I GCGC 1 cut(s) 383
HincII GTYRAC 2 cut(s) 869, 1962
HindII GTYRAC 2 cut(s) 869, 1962
HindIII AAGCTT 1 cut(s) 1683
HpaI GTTAAC 1 cut(s) 1962
HpaII CCGG 1 cut(s) 2198
Hpy166II GTNNAC 5 cut(s) 869, 1508, 1722, 1962, 2177
Hpy188I TCNGA 9 cut(s) 52, 390, 438, 508, 718, 1150, 1566, 1630, 1654
Hpy188III TCNNGA 5 cut(s) 317, 1229, 1451, 1544, 1925
Hpy8I GTNNAC 5 cut(s) 869, 1508, 1722, 1962, 2177
Hpy99I CGWCG 1 cut(s) 336
HpyAV CCTTC 2 cut(s) 302, 616
HpyCH4III ACNGT 5 cut(s) 254, 568, 882, 1899, 1939
HpyCH4IV ACGT 2 cut(s) 1724, 2179
HpyF10VI GCNNNNNNNGC 6 cut(s) 518, 533, 1040, 1204, 1505, 1911
HpyF3I CTNAG 8 cut(s) 507, 717, 1116, 1124, 1860, 1878, 2005, 2031
HpySE526I ACGT 2 cut(s) 1724, 2179
HspAI GCGC 1 cut(s) 383
Ksp22I TGATCA 2 cut(s) 765, 1024
KspAI GTTAAC 1 cut(s) 1962
Kzo9I GATC 5 cut(s) 765, 794, 1024, 1142, 1438
LmnI GCTCC 1 cut(s) 1526
Lsp1109I GCAGC 5 cut(s) 938, 1021, 1099, 1955, 2073
LweI GCATC 8 cut(s) 353, 394, 523, 667, 699, 778, 1105, 1983
MaeI CTAG 4 cut(s) 1044, 1298, 1845, 2052
MaeII ACGT 2 cut(s) 1724, 2179
MaeIII GTNAC 2 cut(s) 277, 361
MalI GATC 5 cut(s) 767, 796, 1026, 1144, 1440
MboI GATC 5 cut(s) 765, 794, 1024, 1142, 1438
MfeI CAATTG 3 cut(s) 147, 1171, 2166
MflI RGATCY 1 cut(s) 1142
MhlI GDGCHC 4 cut(s) 1297, 1510, 1668, 1747
MlyI GAGTC 2 cut(s) 451, 1892
MmeI TCCRAC 1 cut(s) 769
Mph1103I ATGCAT 3 cut(s) 346, 457, 1358
MroXI GAANNNNTTC 2 cut(s) 312, 1062
MseI TTAA 9 cut(s) 486, 894, 1371, 1701, 1805, 1934, 1961, 2012, 2151
MslI CAYNNNNRTG 3 cut(s) 450, 528, 1978
MspCI CTTAAG 2 cut(s) 485, 1370
MspI CCGG 1 cut(s) 2198
MspR9I CCNGG 1 cut(s) 2198
MunI CAATTG 3 cut(s) 147, 1171, 2166
Mva1269I GAATGC 2 cut(s) 1358, 2077
MwoI GCNNNNNNNGC 6 cut(s) 518, 533, 1040, 1204, 1505, 1911
NciI CCSGG 1 cut(s) 2198
NcoI CCATGG 1 cut(s) 1038
NdeI CATATG 1 cut(s) 1512
NdeII GATC 5 cut(s) 765, 794, 1024, 1142, 1438
NmuCI GTSAC 1 cut(s) 277
NsiI ATGCAT 3 cut(s) 346, 457, 1358
NspI RCATGY 3 cut(s) 116, 527, 1180
NspV TTCGAA 1 cut(s) 1413
PaqCI CACCTGC 1 cut(s) 671
PctI GAATGC 2 cut(s) 1358, 2077
PdmI GAANNNNTTC 2 cut(s) 312, 1062
PfeI GAWTC 8 cut(s) 47, 83, 231, 953, 1120, 1786, 1864, 2187
PkrI GCNGC 6 cut(s) 928, 1036, 1114, 1916, 1945, 2063
Ple19I CGATCG 1 cut(s) 797
PleI GAGTC 2 cut(s) 450, 1891
PpsI GAGTC 2 cut(s) 450, 1891
Ppu21I YACGTR 1 cut(s) 2180
PshAI GACNNNNGTC 1 cut(s) 330
PspPI GGNCC 1 cut(s) 596
PstI CTGCAG 1 cut(s) 405
PstNI CAGNNNCTG 1 cut(s) 686
PsuI RGATCY 1 cut(s) 1142
PvuI CGATCG 1 cut(s) 797
RsaI GTAC 7 cut(s) 19, 337, 466, 583, 698, 1597, 2182
RsaNI GTAC 7 cut(s) 18, 336, 465, 582, 697, 1596, 2181
RseI CAYNNNNRTG 3 cut(s) 450, 528, 1978
SalI GTCGAC 1 cut(s) 867
SaqAI TTAA 9 cut(s) 486, 894, 1371, 1701, 1805, 1934, 1961, 2012, 2151
SatI GCNGC 6 cut(s) 927, 1035, 1113, 1915, 1944, 2062
Sau3AI GATC 5 cut(s) 765, 794, 1024, 1142, 1438
Sau96I GGNCC 1 cut(s) 596
ScaI AGTACT 3 cut(s) 466, 698, 1597
SchI GAGTC 2 cut(s) 451, 1892
ScrFI CCNGG 1 cut(s) 2198
SduI GDGCHC 4 cut(s) 1297, 1510, 1668, 1747
SfaNI GCATC 8 cut(s) 353, 394, 523, 667, 699, 778, 1105, 1983
SfcI CTRYAG 1 cut(s) 401
SfuI TTCGAA 1 cut(s) 1413
SmiMI CAYNNNNRTG 3 cut(s) 450, 528, 1978
SmlI CTYRAG 4 cut(s) 485, 1229, 1244, 1370
SmoI CTYRAG 4 cut(s) 485, 1229, 1244, 1370
SpeI ACTAGT 2 cut(s) 1297, 1844
SsiI CCGC 4 cut(s) 1282, 1405, 1793, 1915
SspI AATATT 1 cut(s) 1379
SspMI CTAG 4 cut(s) 1044, 1298, 1845, 2052
StyD4I CCNGG 1 cut(s) 2196
StyI CCWWGG 2 cut(s) 607, 1038
TaaI ACNGT 5 cut(s) 254, 568, 882, 1899, 1939
TaiI ACGT 2 cut(s) 1727, 2182
TaqI TCGA 6 cut(s) 316, 793, 868, 1413, 1441, 1886
TatI WGTACW 4 cut(s) 464, 581, 696, 1595
TauI GCSGC 1 cut(s) 1917
TfiI GAWTC 8 cut(s) 47, 83, 231, 953, 1120, 1786, 1864, 2187
Tru1I TTAA 9 cut(s) 486, 894, 1371, 1701, 1805, 1934, 1961, 2012, 2151
Tru9I TTAA 9 cut(s) 486, 894, 1371, 1701, 1805, 1934, 1961, 2012, 2151
TscAI CASTG 3 cut(s) 80, 1327, 2035
TseFI GTSAC 1 cut(s) 277
TseI GCWGC 5 cut(s) 926, 1034, 1112, 1943, 2061
Tsp45I GTSAC 1 cut(s) 277
TspRI CASTG 3 cut(s) 80, 1327, 2035
Vha464I CTTAAG 2 cut(s) 485, 1370
VneI GTGCAC 1 cut(s) 1506
XapI RAATTY 6 cut(s) 271, 415, 721, 1151, 1571, 1581
XceI RCATGY 3 cut(s) 116, 527, 1180
XmiI GTMKAC 1 cut(s) 868
XmnI GAANNNNTTC 2 cut(s) 312, 1062
XspI CTAG 4 cut(s) 1044, 1298, 1845, 2052
ZrmI AGTACT 3 cut(s) 466, 698, 1597
Zsp2I ATGCAT 3 cut(s) 346, 457, 1358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.