Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000285

Physical Location & Seq

Genomic Coordinates Forward (+)

5559104 .. 5561520

Gene Structure 2417 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g09550.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

ATGGCTAGCAGCAAAACCAGCTTTCGACTTCTTTTACCTGTTTTCCTCATTTCGTTAACTGTATCTGTTCCCTTAAGAGCCAGTTTGACCAACTCTGGTGCAAAAAATTTCAGTATGGCTTGCTTTGAGGAGGAGCGGAAAGCCCTTCTTGAATTCAAACGCAGCCTTGGTGATTCTTTACCCGGACTTTCATCTTGGATAGGGGAAGACTGCTACAAGTGGACGAGCATACGGTGCAGCAACCAAACCAGCCATGTTATCCAGCTTGACCTTAGCAACATCTGTGGAGAGGGAAGTGATAATCCAGCACCTGATGCTCCCATGTCGGCATGCTTAGGTGGTGAGCTATCTGCTTCTTTAGTTAATCTAACAGCCTTAAACTACTTGGACTTGAGTGGCAATACTTTCAAAAGTATTCCCATCCCAAGTTTCATAGGTTCACTCCAGAAGTTGAGGTACCTTGACCTCTCCGACTCGGGTTTTGTAGGATTGTTCCCACCTCATCTTGGAAATCTTTTACAGTTGAGGACCCTAGACCTTTCAAAAAACTCAATCTCCGGTTCACTCCCAGCATCAATAGGAAATCTTATCAACCTGGAAACATTGGACCTATCCGAAAACAAAATATCTGGTCCACTTCCTGTGTCAGTAGGAAATCTGTCACATTTGAATATCCTAGACCTTTCCTTCAACATGATTAATGGTCTCATTCCAAAGAGTATTGGACAACTTAGAGAATTAGGTTTCCTGAATCTCTGGTCTAATCAATGGGAAGGCATCATAAGTGAGAGTCATTTTGAAAACCTCACAAGATTGTCTAATCTTCAATTATCATCGAAGTCTCTGGTTTTCAACTTCAGTCAAGAGTGGACTCCTTCCTTCAGTGCACCTTTCATCAGTATCAGTATCCGTGATTGCAAATTTCTGGGTGCATTCGTTAATCTGGAAAACAACTCCTTGGAGGGTTCCATTCCACTTTGCCCAAATGTATCATACCTATACTTGGGAAACAATAGATTTTCAAGATCAATTCCATTGAACATTGGCCAGGAGATGTCATCACTGTATAGCCTAGACCTTTCTAGGAATAATCTAAGTGGTAGCATTCCCCATTCACTAACTACATTGCCAATGTTGGGCTCTATTGATCTCTCAAGGAACTTTTTATCCGGAAGTATCCCCAAGGATTGGCAAGGTTCAAAAGGAATGTCGACTATAGATCTTTCCAATAACAATCTATCTGGTCAAATTCCACCAAGTTTGTGCTCTCAGCAACCTTCACTTTTCTGGTTGAGATTAAGTAATAATAATCTTTCTGGGGAGCTTGGACCGTCCTTGCAAAACTGTCGAAACTTGTACACACTCGATCTTGGAGGGAACCAGTTCTCCGGAACCATACCAGAGTGGATTGGAGAAGACCTACATTCCTTGGGAATTTTACTTCTTGGAGAGAACAAGTTCTTGGGTAGTATACCTCGACAACTGTGCACTCTCGATTCTCTTCATGTCTTAGACCTGTCTCAAAATAATCTATCAGGATCTGTCCCAATATGCCTAGGTAATTTGACGCAGTTGACAAAGTTAAGTGGCATGCCTCAGCCATTTCCTTCTGGTATGGATCTATGGCATATTGATTTGGATCCGAAAGGCGTAGAATATGAATACACTACTATTCTACCCCTTGTAAACACCATCGATCTCTCAAGCAACATGATATCCGGCAATATACCAGAAGAGATGAGAAACCTATCCAACTTGGGTTGCTTGAATTTATCTCGGAATCTATTGACAGGAAAGATACCGGAGGATATTGGAAGCTTACAAAGGTTACAGGCACTTGATCTTTCCTGTAACAATCTTCAGGGTCCAATTCCTAAAAGCATGACCTTTATGACTTCGCTGAGCAAACTGAACTTGTCTGGGGCAATCCCATCCGCTAACCAATTCCAAACCTTCAATGATCCAACTTTATTTGAAGGAAATCTGGGTCTCTGTGGCGCTCCGTTGACAACTCAGTGCTCATCATCCCCTGATGGGAATCCAGAAGTTAAAGAAGATGCAGGCGATGAAGATGAAGAAGGGTCTGGAAAGATATGGTTCTATGCAAGCACTTCGATGGGGTTCATTATGGGATTTTGGGTTGTTTTTGGCAGTTTGGTGCTAAAGAAGTCATGGAGACACGTCTATTTCAAGTTTGTCGACGACATGAAAGATAGGCTCATTTTGGTAGTCACACGGAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010232 GO:0010233 GO:0010305 GO:0014070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

748

Amino Acids

81.57

Weight (kDa)

5.13

Isoelectric Point (pI)

38.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	150 - 209	6.2e-08	Leucine rich repeat
LRR_14	PF23598	168 - 386	1.6e-18	Leucine-rich repeat region
LRR_4	PF12799	174 - 209	2.8e-06	Leucine Rich repeats (2 copies)
LRR_8	PF13855	198 - 256	1.7e-06	Leucine rich repeat
LRR_8	PF13855	328 - 387	6.3e-07	Leucine rich repeat
LRR_14	PF23598	576 - 640	9.1e-06	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47885
fragaria_vesca	FvH4_3g09550 FvH4_4g32560
malus_domestica	MD01G1172200.v1.1
rosa_chinensis	RchiOBHm_Chr1g0353911 RchiOBHm_Chr1g0354141 RchiOBHm_Chr1g0354151 RchiOBHm_Chr1g0354161 RchiOBHm_Chr1g0354191 RchiOBHm_Chr1g0354201 RchiOBHm_Chr1g0354221 RchiOBHm_Chr1g0354271 RchiOBHm_Chr1g0354301 RchiOBHm_Chr1g0354321 RchiOBHm_Chr1g0354371 RchiOBHm_Chr1g0354401 RchiOBHm_Chr1g0354411 RchiOBHm_Chr1g0354451 RchiOBHm_Chr1g0354551 RchiOBHm_Chr1g0359231 RchiOBHm_Chr3g0470501 RchiOBHm_Chr4g0440611 RchiOBHm_Chr4g0440631 RchiOBHm_Chr4g0441421 RchiOBHm_Chr4g0441431 RchiOBHm_Chr5g0015191 RchiOBHm_Chr5g0022441 RchiOBHm_Chr7g0207081
rosa_laevigata	RLG00000009355 RLG00000009356 RLG00000023813 RLG00000024262 RLG00000028199 RLG00000028200 RLG00000028204 RLG00000028209 RLG00000028211 RLG00000028214 RLG00000028216 RLG00000028220 RLG00000028221 RLG00000028223 RLG00000028224 RLG00000028886 RLG00000029706 RLG00000032176
rosa_multiflora	Rmu_co8366321.1_g000001 Rmu_sc0001926.1_g000008 Rmu_sc0001926.1_g000009 Rmu_sc0002115.1_g000006 Rmu_sc0002115.1_g000007 Rmu_sc0002209.1_g000020 Rmu_sc0002737.1_g000005 Rmu_sc0002737.1_g000009 Rmu_sc0002737.1_g000015 Rmu_sc0002737.1_g000016 Rmu_sc0002737.1_g000018 Rmu_sc0002930.1_g000003 Rmu_sc0002930.1_g000005 Rmu_sc0003292.1_g000004 Rmu_sc0003360.1_g000004 Rmu_sc0003360.1_g000005 Rmu_sc0003381.1_g000013 Rmu_sc0004299.1_g000001 Rmu_sc0007159.1_g000001 Rmu_sc0007159.1_g000007 Rmu_sc0009777.1_g000002 Rmu_sc0010755.1_g000002 Rmu_sc0012353.1_g000001 Rmu_sc0012562.1_g000003 Rmu_sc0012562.1_g000004 Rmu_sc0012562.1_g000006 Rmu_sc0012562.1_g000013 Rmu_sc0012562.1_g000021 Rmu_sc0015525.1_g000001 Rmu_sc0015525.1_g000005 Rmu_sc0018378.1_g000001 Rmu_sc0022127.1_g000002 Rmu_sc0022144.1_g000002 Rmu_sc0035791.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056680 Rroxscaffold_1G00061360 Rroxscaffold_3G00236900 Rroxscaffold_4G00300940 Rroxscaffold_4G00301040 Rroxscaffold_4G00301050 Rroxscaffold_4G00301070 Rroxscaffold_4G00301100 Rroxscaffold_4G00301110 Rroxscaffold_4G00301930 Rroxscaffold_4G00301940 Rroxscaffold_4G00301950 Rroxscaffold_7G00202690
rosa_rugosa	Rorug01G0242000 Rorug01G0242100 Rorug01G0242200 Rorug01G0242300 Rorug01G0242700 Rorug01G0242900 Rorug01G0243000 Rorug03G0109600 Rorug03G0109700 Rorug04G0327000 Rorug04G0333500 Rorug04G0333600 Rorug05G0024600 RorugPtG0003000
rosa_samantha	Rh1AG253200 Rh1AG253400 Rh1BG225200 Rh1CG177100 Rh1CG234500 Rh1CG237000 Rh1DG252000 Rh1DG252400 Rh1DG252900 Rh3CG085900 Rh4BG399300 Rh4DG391900
rosa_wichuraiana	Rw1G015760 Rw1G022030 Rw1G022100 Rw1G022120 Rw1G022230 Rw5G010290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	456
AccB1I	GGYRCC	1 cut(s)	456
AccB7I	CCANNNNNTGG	1 cut(s)	1188
AccBSI	CCGCTC	1 cut(s)	136
AccI	GTMKAC	3 cut(s)	1211, 1471, 2199
AccIII	TCCGGA	2 cut(s)	1169, 1388
AciI	CCGC	2 cut(s)	136, 1935
AclWI	GGATC	5 cut(s)	1546, 1626, 1634, 1647, 1955
AcoI	YGGCCR	1 cut(s)	1045
AcsI	RAATTY	6 cut(s)	106, 152, 920, 1248, 1434, 1768
AcuI	CTGAAG	3 cut(s)	841, 865, 1844
AfaI	GTAC	2 cut(s)	458, 1358
AfiI	CCNNNNNNNGG	5 cut(s)	506, 1003, 1136, 1188, 2034
AflII	CTTAAG	1 cut(s)	73
AflIII	ACRYGT	1 cut(s)	2179
AjiI	CACGTC	1 cut(s)	2182
AjnI	CCWGG	2 cut(s)	594, 1047
AjuI	GAANNNNNNNTTGG	2 cut(s)	1445, 1477
AloI	GAACNNNNNNTCC	4 cut(s)	1151, 1183, 1370, 1402
AluBI	AGCT	5 cut(s)	21, 265, 346, 1324, 1818
AluI	AGCT	5 cut(s)	21, 265, 346, 1324, 1818
Alw21I	GWGCWC	4 cut(s)	889, 1268, 1490, 2021
Alw26I	GTCTC	5 cut(s)	710, 846, 1524, 1994, 2170
Alw44I	GTGCAC	2 cut(s)	885, 1486
AlwI	GGATC	5 cut(s)	1546, 1626, 1634, 1647, 1955
AlwNI	CAGNNNCTG	2 cut(s)	311, 1541
Ama87I	CYCGRG	1 cut(s)	475
Aor13HI	TCCGGA	2 cut(s)	1169, 1388
AoxI	GGCC	1 cut(s)	1045
ApaLI	GTGCAC	2 cut(s)	885, 1486
ApeKI	GCWGC	3 cut(s)	9, 162, 237
ApoI	RAATTY	6 cut(s)	106, 152, 920, 1248, 1434, 1768
ArsI	GACNNNNNNTTYG	4 cut(s)	464, 496, 1193, 1225
AseI	ATTAAT	1 cut(s)	699
Asp700I	GAANNNNTTC	2 cut(s)	1382, 1457
Asp718I	GGTACC	1 cut(s)	456
AspA2I	CCTAGG	1 cut(s)	1555
AspLEI	GCGC	1 cut(s)	2000
AspS9I	GGNCC	5 cut(s)	528, 607, 632, 1328, 1865
AsuC2I	CCSGG	1 cut(s)	183
AsuHPI	GGTGA	2 cut(s)	182, 353
AsuNHI	GCTAGC	1 cut(s)	5
AvaI	CYCGRG	1 cut(s)	475
AvaII	GGWCC	5 cut(s)	528, 607, 632, 1328, 1865
AvrII	CCTAGG	1 cut(s)	1555
BaeGI	GKGCMC	2 cut(s)	889, 1490
BalI	TGGCCA	1 cut(s)	1047
BamHI	GGATCC	1 cut(s)	1639
BanI	GGYRCC	1 cut(s)	456
BanII	GRGCYC	1 cut(s)	1142
BarI	GAAGNNNNNNTAC	2 cut(s)	440, 472
BbsI	GAAGAC	2 cut(s)	213, 1422
Bbv12I	GWGCWC	4 cut(s)	889, 1268, 1490, 2021
BbvCI	CCTCAGC	1 cut(s)	1596
BbvI	GCAGC	3 cut(s)	21, 174, 249
BccI	CCATC	5 cut(s)	428, 1700, 1939, 2027, 2110
BcgI	CGANNNNNNTGC	6 cut(s)	1328, 1362, 1467, 1501, 2094, 2128
BciT130I	CCWGG	2 cut(s)	596, 1049
BciVI	GTATCC	2 cut(s)	917, 1187
BcnI	CCSGG	1 cut(s)	183
BcoDI	GTCTC	5 cut(s)	710, 846, 1524, 1994, 2170
BfaI	CTAG	6 cut(s)	6, 533, 677, 1073, 1083, 1556
BfmI	CTRYAG	1 cut(s)	1215
BfoI	RGCGCY	1 cut(s)	2001
BfrI	CTTAAG	1 cut(s)	73
BfuI	GTATCC	2 cut(s)	917, 1187
BglII	AGATCT	1 cut(s)	1219
BisI	GCNGC	3 cut(s)	10, 163, 238
BlnI	CCTAGG	1 cut(s)	1555
BlpI	GCTNAGC	1 cut(s)	1901
BlsI	GCNGC	3 cut(s)	11, 164, 239
Bme1390I	CCNGG	3 cut(s)	183, 596, 1049
Bme18I	GGWCC	5 cut(s)	528, 607, 632, 1328, 1865
BmeT110I	CYCGRG	1 cut(s)	475
BmgBI	CACGTC	1 cut(s)	2182
BmgT120I	GGNCC	5 cut(s)	528, 607, 632, 1328, 1865
BmiI	GGNNCC	7 cut(s)	458, 530, 967, 1379, 1393, 1641, 1866
BmrFI	CCNGG	3 cut(s)	183, 596, 1049
BmsI	GCATC	4 cut(s)	304, 581, 786, 2047
BmtI	GCTAGC	1 cut(s)	9
BpiI	GAAGAC	2 cut(s)	213, 1422
BpmI	CTGGAG	1 cut(s)	428
Bpu10I	CCTNAGC	3 cut(s)	272, 334, 1596
Bpu1102I	GCTNAGC	1 cut(s)	1901
BpuEI	CTTGAG	3 cut(s)	412, 1138, 1687
BpuMI	CCSGG	1 cut(s)	183
Bsa29I	ATCGAT	1 cut(s)	1695
BsaBI	GATNNNNATC	2 cut(s)	1638, 2037
BsaI	GGTCTC	2 cut(s)	710, 1994
BsaJI	CCNNGG	5 cut(s)	166, 957, 1182, 1428, 1555
BsaWI	WCCGGW	4 cut(s)	557, 1169, 1388, 1801
BsaXI	ACNNNNNCTCC	4 cut(s)	539, 569, 1370, 1400
Bsc4I	CCNNNNNNNGG	5 cut(s)	506, 1003, 1136, 1188, 2034
Bse1I	ACTGG	2 cut(s)	81, 1381
Bse3DI	GCAATG	1 cut(s)	1124
Bse8I	GATNNNNATC	2 cut(s)	1638, 2037
BseAI	TCCGGA	2 cut(s)	1169, 1388
BseBI	CCWGG	2 cut(s)	596, 1049
BseCI	ATCGAT	1 cut(s)	1695
BseDI	CCNNGG	5 cut(s)	166, 957, 1182, 1428, 1555
BseGI	GGATG	3 cut(s)	420, 1931, 2024
BseJI	GATNNNNATC	2 cut(s)	1638, 2037
BseLI	CCNNNNNNNGG	5 cut(s)	506, 1003, 1136, 1188, 2034
BseMI	GCAATG	1 cut(s)	1124
BseMII	CTCAG	4 cut(s)	1283, 1610, 1892, 2027
BseNI	ACTGG	2 cut(s)	81, 1381
BseRI	GAGGAG	2 cut(s)	143, 146
BseSI	GKGCMC	2 cut(s)	889, 1490
BseXI	GCAGC	3 cut(s)	21, 174, 249
BseYI	CCCAGC	1 cut(s)	568
BsgI	GTGCAG	1 cut(s)	256
BshFI	GGCC	1 cut(s)	1047
BshNI	GGYRCC	1 cut(s)	456
BshVI	ATCGAT	1 cut(s)	1695
BsiHKAI	GWGCWC	4 cut(s)	889, 1268, 1490, 2021
BsiHKCI	CYCGRG	1 cut(s)	475
BsiSI	CCGG	6 cut(s)	183, 558, 1170, 1389, 1719, 1802
BslFI	GGGAC	1 cut(s)	1529
BslI	CCNNNNNNNGG	5 cut(s)	506, 1003, 1136, 1188, 2034
BsmAI	GTCTC	5 cut(s)	710, 846, 1524, 1994, 2170
BsmFI	GGGAC	1 cut(s)	1529
BsmI	GAATGC	2 cut(s)	932, 1104
BsnI	GGCC	1 cut(s)	1047
Bso31I	GGTCTC	2 cut(s)	710, 1994
BsoBI	CYCGRG	1 cut(s)	475
Bsp1286I	GDGCHC	5 cut(s)	889, 1142, 1268, 1490, 2021
Bsp13I	TCCGGA	2 cut(s)	1169, 1388
Bsp1407I	TGTACA	1 cut(s)	1356
Bsp1720I	GCTNAGC	1 cut(s)	1901
BspACI	CCGC	2 cut(s)	136, 1935
BspANI	GGCC	1 cut(s)	1047
BspCNI	CTCAG	4 cut(s)	1282, 1609, 1893, 2026
BspDI	ATCGAT	1 cut(s)	1695
BspEI	TCCGGA	2 cut(s)	1169, 1388
BspLI	GGNNCC	7 cut(s)	458, 530, 967, 1379, 1393, 1641, 1866
BspOI	GCTAGC	1 cut(s)	9
BspPI	GGATC	5 cut(s)	1546, 1626, 1634, 1647, 1955
BspT107I	GGYRCC	1 cut(s)	456
BspTI	CTTAAG	1 cut(s)	73
BspTNI	GGTCTC	2 cut(s)	710, 1994
BsrBI	CCGCTC	1 cut(s)	136
BsrDI	GCAATG	1 cut(s)	1124
BsrGI	TGTACA	1 cut(s)	1356
BsrI	ACTGG	2 cut(s)	81, 1381
BssECI	CCNNGG	5 cut(s)	166, 957, 1182, 1428, 1555
BssNAI	GTATAC	1 cut(s)	1472
BssT1I	CCWWGG	5 cut(s)	166, 957, 1182, 1428, 1555
Bst1107I	GTATAC	1 cut(s)	1472
Bst2UI	CCWGG	2 cut(s)	596, 1049
Bst4CI	ACNGT	7 cut(s)	61, 234, 522, 1065, 1332, 1346, 1485
Bst6I	CTCTTC	2 cut(s)	1506, 1728
BstAFI	CTTAAG	1 cut(s)	73
BstAPI	GCANNNNNTGC	2 cut(s)	234, 314
BstAUI	TGTACA	1 cut(s)	1356
BstC8I	GCNNGC	6 cut(s)	7, 121, 331, 1592, 2062, 2107
BstDEI	CTNAG	9 cut(s)	272, 334, 731, 1094, 1269, 1510, 1596, 1901, 2013
BstF5I	GGATG	3 cut(s)	420, 1931, 2024
BstH2I	RGCGCY	1 cut(s)	2001
BstHHI	GCGC	1 cut(s)	2000
BstMAI	GTCTC	5 cut(s)	710, 846, 1524, 1994, 2170
BstMWI	GCNNNNNNNGC	3 cut(s)	18, 234, 314
BstNI	CCWGG	2 cut(s)	596, 1049
BstNSI	RCATGY	2 cut(s)	333, 1594
BstSCI	CCNGG	3 cut(s)	181, 594, 1047
BstSFI	CTRYAG	1 cut(s)	1215
BstSLI	GKGCMC	2 cut(s)	889, 1490
BstV1I	GCAGC	3 cut(s)	21, 174, 249
BstV2I	GAAGAC	2 cut(s)	213, 1422
BstX2I	RGATCY	4 cut(s)	1219, 1538, 1618, 1639
BstYI	RGATCY	4 cut(s)	1219, 1538, 1618, 1639
BstZ17I	GTATAC	1 cut(s)	1472
Bsu15I	ATCGAT	1 cut(s)	1695
BsuI	GTATCC	2 cut(s)	917, 1187
BsuRI	GGCC	1 cut(s)	1047
BsuTUI	ATCGAT	1 cut(s)	1695
BtgZI	GCGATG	1 cut(s)	2079
BtrI	CACGTC	1 cut(s)	2182
BtsCI	GGATG	3 cut(s)	420, 1931, 2024
BtsIMutI	CAGTG	3 cut(s)	889, 1061, 2021
Cac8I	GCNNGC	6 cut(s)	7, 121, 331, 1592, 2062, 2107
CaiI	CAGNNNCTG	2 cut(s)	311, 1541
CfoI	GCGC	1 cut(s)	2000
Cfr13I	GGNCC	5 cut(s)	528, 607, 632, 1328, 1865
ClaI	ATCGAT	1 cut(s)	1695
CseI	GACGC	1 cut(s)	1576
Csp6I	GTAC	2 cut(s)	457, 1357
CspCI	CAANNNNNGTGG	4 cut(s)	265, 300, 1242, 1277
CviQI	GTAC	2 cut(s)	457, 1357
DdeI	CTNAG	9 cut(s)	272, 334, 731, 1094, 1269, 1510, 1596, 1901, 2013
EaeI	YGGCCR	1 cut(s)	1045
Eam1104I	CTCTTC	2 cut(s)	1506, 1728
EarI	CTCTTC	2 cut(s)	1506, 1728
Eco130I	CCWWGG	5 cut(s)	166, 957, 1182, 1428, 1555
Eco24I	GRGCYC	1 cut(s)	1142
Eco31I	GGTCTC	2 cut(s)	710, 1994
Eco32I	GATATC	1 cut(s)	1716
Eco47I	GGWCC	5 cut(s)	528, 607, 632, 1328, 1865
Eco57I	CTGAAG	3 cut(s)	841, 865, 1844
Eco88I	CYCGRG	1 cut(s)	475
EcoO109I	RGGNCCY	1 cut(s)	528
EcoRI	GAATTC	1 cut(s)	152
EcoRII	CCWGG	2 cut(s)	594, 1047
EcoRV	GATATC	1 cut(s)	1716
EcoT14I	CCWWGG	5 cut(s)	166, 957, 1182, 1428, 1555
EcoT38I	GRGCYC	1 cut(s)	1142
ErhI	CCWWGG	5 cut(s)	166, 957, 1182, 1428, 1555
FalI	AAGNNNNNCTT	2 cut(s)	132, 164
FaqI	GGGAC	1 cut(s)	1529
FblI	GTMKAC	3 cut(s)	1211, 1471, 2199
Fnu4HI	GCNGC	3 cut(s)	10, 163, 238
FokI	GGATG	3 cut(s)	407, 1918, 2011
FriOI	GRGCYC	1 cut(s)	1142
Fsp4HI	GCNGC	3 cut(s)	10, 163, 238
FspBI	CTAG	6 cut(s)	6, 533, 677, 1073, 1083, 1556
GlaI	GCGC	1 cut(s)	1999
GluI	GCNGC	3 cut(s)	10, 163, 238
GsaI	CCCAGC	1 cut(s)	572
GsuI	CTGGAG	1 cut(s)	428
HaeII	RGCGCY	1 cut(s)	2001
HaeIII	GGCC	1 cut(s)	1047
HapII	CCGG	6 cut(s)	183, 558, 1170, 1389, 1719, 1802
HgaI	GACGC	1 cut(s)	1576
HhaI	GCGC	1 cut(s)	2000
Hin6I	GCGC	1 cut(s)	1998
HinP1I	GCGC	1 cut(s)	1998
HincII	GTYRAC	5 cut(s)	57, 1212, 1575, 2007, 2200
HindII	GTYRAC	5 cut(s)	57, 1212, 1575, 2007, 2200
HindIII	AAGCTT	1 cut(s)	1816
HinfI	GANTC	8 cut(s)	173, 473, 751, 790, 871, 1496, 1780, 2038
HpaI	GTTAAC	1 cut(s)	57
HpaII	CCGG	6 cut(s)	183, 558, 1170, 1389, 1719, 1802
HphI	GGTGA	2 cut(s)	182, 353
Hpy188I	TCNGA	4 cut(s)	472, 616, 1644, 1779
Hpy99I	CGWCG	1 cut(s)	2204
HpyCH4III	ACNGT	7 cut(s)	61, 234, 522, 1065, 1332, 1346, 1485
HpyCH4IV	ACGT	1 cut(s)	2181
HpyCH4V	TGCA	9 cut(s)	101, 237, 887, 918, 932, 1339, 1488, 2060, 2105
HpyF10VI	GCNNNNNNNGC	3 cut(s)	18, 234, 314
HpyF3I	CTNAG	9 cut(s)	272, 334, 731, 1094, 1269, 1510, 1596, 1901, 2013
HpySE526I	ACGT	1 cut(s)	2181
HspAI	GCGC	1 cut(s)	1998
Kpn2I	TCCGGA	2 cut(s)	1169, 1388
KpnI	GGTACC	1 cut(s)	460
KspAI	GTTAAC	1 cut(s)	57
LmnI	GCTCC	4 cut(s)	133, 322, 1321, 2005
Lsp1109I	GCAGC	3 cut(s)	21, 174, 249
LweI	GCATC	4 cut(s)	304, 581, 786, 2047
MaeI	CTAG	6 cut(s)	6, 533, 677, 1073, 1083, 1556
MaeII	ACGT	1 cut(s)	2181
MaeIII	GTNAC	4 cut(s)	660, 1827, 1850, 2230
MbiI	CCGCTC	1 cut(s)	136
MboII	GAAGA	9 cut(s)	218, 815, 1427, 1493, 1745, 1850, 2066, 2081, 2087
MflI	RGATCY	4 cut(s)	1219, 1538, 1618, 1639
MhlI	GDGCHC	5 cut(s)	889, 1142, 1268, 1490, 2021
MlsI	TGGCCA	1 cut(s)	1047
MluNI	TGGCCA	1 cut(s)	1047
MlyI	GAGTC	3 cut(s)	467, 799, 865
MmeI	TCCRAC	3 cut(s)	495, 1776, 1988
Mox20I	TGGCCA	1 cut(s)	1047
MroI	TCCGGA	2 cut(s)	1169, 1388
MroXI	GAANNNNTTC	2 cut(s)	1382, 1457
MscI	TGGCCA	1 cut(s)	1047
MseI	TTAA	9 cut(s)	56, 74, 363, 377, 699, 939, 1298, 1583, 2049
MslI	CAYNNNNRTG	1 cut(s)	2114
Msp20I	TGGCCA	1 cut(s)	1047
MspCI	CTTAAG	1 cut(s)	73
MspI	CCGG	6 cut(s)	183, 558, 1170, 1389, 1719, 1802
MspR9I	CCNGG	3 cut(s)	183, 596, 1049
Mva1269I	GAATGC	2 cut(s)	932, 1104
MvaI	CCWGG	2 cut(s)	596, 1049
MwoI	GCNNNNNNNGC	3 cut(s)	18, 234, 314
NciI	CCSGG	1 cut(s)	183
NheI	GCTAGC	1 cut(s)	5
NlaIV	GGNNCC	7 cut(s)	458, 530, 967, 1379, 1393, 1641, 1866
NmuCI	GTSAC	2 cut(s)	660, 2230
NspI	RCATGY	2 cut(s)	333, 1594
PaeI	GCATGC	2 cut(s)	333, 1594
PctI	GAATGC	2 cut(s)	932, 1104
PdmI	GAANNNNTTC	2 cut(s)	1382, 1457
PfeI	GAWTC	5 cut(s)	173, 751, 1496, 1780, 2038
PflMI	CCANNNNNTGG	1 cut(s)	1188
PkrI	GCNGC	3 cut(s)	11, 164, 239
PleI	GAGTC	3 cut(s)	467, 798, 865
PpsI	GAGTC	3 cut(s)	467, 798, 865
PpuMI	RGGWCCY	1 cut(s)	528
PshBI	ATTAAT	1 cut(s)	699
Psp5II	RGGWCCY	1 cut(s)	528
Psp6I	CCWGG	2 cut(s)	594, 1047
PspFI	CCCAGC	1 cut(s)	568
PspGI	CCWGG	2 cut(s)	594, 1047
PspN4I	GGNNCC	7 cut(s)	458, 530, 967, 1379, 1393, 1641, 1866
PspPI	GGNCC	5 cut(s)	528, 607, 632, 1328, 1865
PspPPI	RGGWCCY	1 cut(s)	528
PstNI	CAGNNNCTG	2 cut(s)	311, 1541
PsuI	RGATCY	4 cut(s)	1219, 1538, 1618, 1639
RsaI	GTAC	2 cut(s)	458, 1358
RsaNI	GTAC	2 cut(s)	457, 1357
RseI	CAYNNNNRTG	1 cut(s)	2114
SalI	GTCGAC	2 cut(s)	1210, 2198
SaqAI	TTAA	9 cut(s)	56, 74, 363, 377, 699, 939, 1298, 1583, 2049
SatI	GCNGC	3 cut(s)	10, 163, 238
Sau96I	GGNCC	5 cut(s)	528, 607, 632, 1328, 1865
SchI	GAGTC	3 cut(s)	467, 799, 865
ScrFI	CCNGG	3 cut(s)	183, 596, 1049
SduI	GDGCHC	5 cut(s)	889, 1142, 1268, 1490, 2021
SfaNI	GCATC	4 cut(s)	304, 581, 786, 2047
SfcI	CTRYAG	1 cut(s)	1215
SinI	GGWCC	5 cut(s)	528, 607, 632, 1328, 1865
SmiMI	CAYNNNNRTG	1 cut(s)	2114
SmlI	CTYRAG	4 cut(s)	73, 391, 1153, 1702
SmoI	CTYRAG	4 cut(s)	73, 391, 1153, 1702
SphI	GCATGC	2 cut(s)	333, 1594
SsiI	CCGC	2 cut(s)	136, 1935
SspMI	CTAG	6 cut(s)	6, 533, 677, 1073, 1083, 1556
StyD4I	CCNGG	3 cut(s)	181, 594, 1047
StyI	CCWWGG	5 cut(s)	166, 957, 1182, 1428, 1555
TaaI	ACNGT	7 cut(s)	61, 234, 522, 1065, 1332, 1346, 1485
TaiI	ACGT	1 cut(s)	2184
TatI	WGTACW	1 cut(s)	1356
TfiI	GAWTC	5 cut(s)	173, 751, 1496, 1780, 2038
Tru1I	TTAA	9 cut(s)	56, 74, 363, 377, 699, 939, 1298, 1583, 2049
Tru9I	TTAA	9 cut(s)	56, 74, 363, 377, 699, 939, 1298, 1583, 2049
TscAI	CASTG	3 cut(s)	889, 1068, 2021
TseFI	GTSAC	2 cut(s)	660, 2230
TseI	GCWGC	3 cut(s)	9, 162, 237
Tsp45I	GTSAC	2 cut(s)	660, 2230
TspDTI	ATGAA	9 cut(s)	180, 421, 883, 1493, 1674, 2082, 2088, 2113, 2222
TspGWI	ACGGA	2 cut(s)	899, 1992
TspRI	CASTG	3 cut(s)	889, 1068, 2021
Van91I	CCANNNNNTGG	1 cut(s)	1188
Vha464I	CTTAAG	1 cut(s)	73
VneI	GTGCAC	2 cut(s)	885, 1486
VpaK11BI	GGWCC	5 cut(s)	528, 607, 632, 1328, 1865
VspI	ATTAAT	1 cut(s)	699
XapI	RAATTY	6 cut(s)	106, 152, 920, 1248, 1434, 1768
XceI	RCATGY	2 cut(s)	333, 1594
XmaJI	CCTAGG	1 cut(s)	1555
XmiI	GTMKAC	3 cut(s)	1211, 1471, 2199
XmnI	GAANNNNTTC	2 cut(s)	1382, 1457
XspI	CTAG	6 cut(s)	6, 533, 677, 1073, 1083, 1556

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.