Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012562.1

Orthogroup ID

OG0000285

Physical Location & Seq

Genomic Coordinates Reverse (-)

50402 .. 52903

Gene Structure 2502 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012562.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2502 bp

atggcttgccacaaagtagcagctgcttcctttcaacttctttctcttgttagtttccttcttttcttaaatccatattcttctattttccttgaagccacaacaatatttgccaactccaatactgctgatgatgagaggtccaatgcagcttgcattgaggaagagaggaaggccctccttgaattcaagcaaggtcttcaagatcctttgtttgagcttcattcttgggttggcaaagactgctgcaactggcatggcatagtctgcaacaaccaaacaggtaacatcatcgagcttcatcttttggatacacaaatctccggtacactttcaatgtcaataggcagtctttcagatttggagaccttgattcttttcaacaattcgttctctggcccacttccgatatcaatcgaaaatctttcacatctgcagaccttgaacctttctttcaatttcatctccggtccacttccgatatcgatcggaaatctttcaaatttgcagaacttggacctttctgaaaactcaatctccggtccacttccaacatcaattggacatctttcaaatttgcagaccttgaacctttcccaaaactcaatctccggtccatttccgatatcgatcagaaatctttcaaatttgcaggagctgcgcctcagacaaaatgcaatctcaggtccacttccaacatggataggaaatctgccacatttacagttgctggaccttgcctacaactcaaaaatgaacggaactattccagaaagcattggacaacttagagagttaaagcacttggatctctatggttgttcatgggaaggctttacatccgaaaatcattttcagaacactagcagattggaatcgttttttctatccagcgaggcatctaactctttggttttcaacgtcagtcatgactggattcctatcttcaatcttatagatctcgggatctgggattgtaaactaatggatactgcttttccagtgtggctcaaaagtcaaaaattcctccagtacttaattcttcagggagtcggaatttcagatacaatacccgattggttttggagattttcaccattccttgagggtgtgatcttatctcataaccagttaagagaaaaccttcccaagtctgtgagttctactcttcaatacgtttttttgaataataacagtttggtaggttcccttccactttggccaaatgtaacactactaagcttggcgagcaatagattttcagggcctattcctttgaacattggccacgagatgtcaaaattgcaagtcctaagtctttctagaaataatctaactggtagttttcccccttccttgagtaaaatgaggtcattggtgagtcttgatctctcaagaaattatttctccggcaacattcctagggattggatgcgtttgcaagatttaaaggtcatagacttttcaaataacaatctctcgggtcagattccaagctctatgtgctcccaactaccatcactcaaatggttgagattaagcaacaacaatctttctgggaatcttgagtcgtctttgcaaacttgcagaaatctctctgcacttgatctgacaggaaacaacttttccggcaccataccagattgtattggagaaaaccttcataaattgtcttatttacttctaaaagccaacaagttcacaggaagtattccttatcaattatgcaatctctcctcccttcaggttttagacctttcccaaaataatatatctggctacattcctgcatgtctttgtggtttgaaacaaatgacaacaggagatggcttgcgcagcgactggatgatgaacttgaggtcatcgtctgatcctaggcatatcgacttaaatgtgaaaggagtagaatatgaatatattgatgatgtcataggactcattacaaagtttgacctgtcaagtaataatctatggggagaaataccagaagaggtgaaaaatctcatggctttgggtagcttgaacttatcccataaccatttgacaggaaagataccagagggtattggaaacttacatgagttagaagcacttgacctctctagtaaccatctttggggtttaattccttcaagcatgacctctatgacttcactaagcaaattaaatttgtcattcaacaacttctctgggccaatcccatcagccaaccaattccccaccttcgatccaacctcatttgaaggaaactcggggctttgtggacctccattgctaacccattgcagctcagtgtcccataatgatccggctgcgaaggttgatgaagatgaagaagataagtatggaaaattatggttctatgcaagcacaacattggggttcattgtaggattttgggttgtttttggaagtttggtgataaagaggtcatggagacttgcttacttccagtttcttgacaatatgaaagacaagctttgcttctgtttttggaagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010232 GO:0010233 GO:0010305 GO:0014070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

833

Amino Acids

92.66

Weight (kDa)

5.45

Isoelectric Point (pI)

40.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47885
fragaria_vesca	FvH4_3g09550 FvH4_4g32560
malus_domestica	MD01G1172200.v1.1
rosa_chinensis	RchiOBHm_Chr1g0353911 RchiOBHm_Chr1g0354141 RchiOBHm_Chr1g0354151 RchiOBHm_Chr1g0354161 RchiOBHm_Chr1g0354191 RchiOBHm_Chr1g0354201 RchiOBHm_Chr1g0354221 RchiOBHm_Chr1g0354271 RchiOBHm_Chr1g0354301 RchiOBHm_Chr1g0354321 RchiOBHm_Chr1g0354371 RchiOBHm_Chr1g0354401 RchiOBHm_Chr1g0354411 RchiOBHm_Chr1g0354451 RchiOBHm_Chr1g0354551 RchiOBHm_Chr1g0359231 RchiOBHm_Chr3g0470501 RchiOBHm_Chr4g0440611 RchiOBHm_Chr4g0440631 RchiOBHm_Chr4g0441421 RchiOBHm_Chr4g0441431 RchiOBHm_Chr5g0015191 RchiOBHm_Chr5g0022441 RchiOBHm_Chr7g0207081
rosa_laevigata	RLG00000009355 RLG00000009356 RLG00000023813 RLG00000024262 RLG00000028199 RLG00000028200 RLG00000028204 RLG00000028209 RLG00000028211 RLG00000028214 RLG00000028216 RLG00000028220 RLG00000028221 RLG00000028223 RLG00000028224 RLG00000028886 RLG00000029706 RLG00000032176
rosa_multiflora	Rmu_co8366321.1_g000001 Rmu_sc0001926.1_g000008 Rmu_sc0001926.1_g000009 Rmu_sc0002115.1_g000006 Rmu_sc0002115.1_g000007 Rmu_sc0002209.1_g000020 Rmu_sc0002737.1_g000005 Rmu_sc0002737.1_g000009 Rmu_sc0002737.1_g000015 Rmu_sc0002737.1_g000016 Rmu_sc0002737.1_g000018 Rmu_sc0002930.1_g000003 Rmu_sc0002930.1_g000005 Rmu_sc0003292.1_g000004 Rmu_sc0003360.1_g000004 Rmu_sc0003360.1_g000005 Rmu_sc0003381.1_g000013 Rmu_sc0004299.1_g000001 Rmu_sc0007159.1_g000001 Rmu_sc0007159.1_g000007 Rmu_sc0009777.1_g000002 Rmu_sc0010755.1_g000002 Rmu_sc0012353.1_g000001 Rmu_sc0012562.1_g000003 Rmu_sc0012562.1_g000004 Rmu_sc0012562.1_g000006 Rmu_sc0012562.1_g000013 Rmu_sc0012562.1_g000021 Rmu_sc0015525.1_g000001 Rmu_sc0015525.1_g000005 Rmu_sc0018378.1_g000001 Rmu_sc0022127.1_g000002 Rmu_sc0022144.1_g000002 Rmu_sc0035791.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056680 Rroxscaffold_1G00061360 Rroxscaffold_3G00236900 Rroxscaffold_4G00300940 Rroxscaffold_4G00301040 Rroxscaffold_4G00301050 Rroxscaffold_4G00301070 Rroxscaffold_4G00301100 Rroxscaffold_4G00301110 Rroxscaffold_4G00301930 Rroxscaffold_4G00301940 Rroxscaffold_4G00301950 Rroxscaffold_7G00202690
rosa_rugosa	Rorug01G0242000 Rorug01G0242100 Rorug01G0242200 Rorug01G0242300 Rorug01G0242700 Rorug01G0242900 Rorug01G0243000 Rorug03G0109600 Rorug03G0109700 Rorug04G0327000 Rorug04G0333500 Rorug04G0333600 Rorug05G0024600 RorugPtG0003000
rosa_samantha	Rh1AG253200 Rh1AG253400 Rh1BG225200 Rh1CG177100 Rh1CG234500 Rh1CG237000 Rh1DG252000 Rh1DG252400 Rh1DG252900 Rh3CG085900 Rh4BG399300 Rh4DG391900
rosa_wichuraiana	Rw1G015760 Rw1G022030 Rw1G022100 Rw1G022120 Rw1G022230 Rw5G010290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1835
AccB1I	GGYRCC	1 cut(s)	1631
AclWI	GGATC	6 cut(s)	200, 816, 974, 1865, 2222, 2300
AcoI	YGGCCR	2 cut(s)	1220, 1285
AcsI	RAATTY	7 cut(s)	185, 502, 574, 646, 1022, 1056, 2167
AcuI	CTGAAG	2 cut(s)	1028, 1727
AfaI	GTAC	2 cut(s)	328, 1034
AfiI	CCNNNNNNNGG	1 cut(s)	2116
Alw21I	GWGCWC	1 cut(s)	1508
Alw26I	GTCTC	2 cut(s)	359, 2431
AlwI	GGATC	6 cut(s)	200, 816, 974, 1865, 2222, 2300
AlwNI	CAGNNNCTG	3 cut(s)	658, 730, 1842
Ama87I	CYCGRG	3 cut(s)	962, 1480, 2251
AoxI	GGCC	6 cut(s)	174, 397, 1220, 1265, 1285, 2192
ApeKI	GCWGC	8 cut(s)	20, 23, 149, 246, 658, 1836, 2286, 2312
ApoI	RAATTY	7 cut(s)	185, 502, 574, 646, 1022, 1056, 2167
Asp700I	GAANNNNTTC	4 cut(s)	496, 640, 1143, 1659
AspA2I	CCTAGG	2 cut(s)	1421, 1874
AspLEI	GCGC	2 cut(s)	663, 1836
AsuHPI	GGTGA	4 cut(s)	1086, 1390, 2005, 2431
AvaI	CYCGRG	3 cut(s)	962, 1480, 2251
AvaII	GGWCC	8 cut(s)	141, 470, 517, 542, 614, 686, 733, 2264
AvrII	CCTAGG	2 cut(s)	1421, 1874
BalI	TGGCCA	2 cut(s)	1222, 1287
BanI	GGYRCC	1 cut(s)	1631
BarI	GAAGNNNNNNTAC	2 cut(s)	1194, 1226
BauI	CACGAG	1 cut(s)	1289
BbsI	GAAGAC	1 cut(s)	191
Bbv12I	GWGCWC	1 cut(s)	1508
BbvI	GCAGC	8 cut(s)	10, 32, 161, 233, 645, 1848, 2298, 2299
BccI	CCATC	4 cut(s)	1525, 1820, 2118, 2209
BciVI	GTATCC	2 cut(s)	304, 982
BcoDI	GTCTC	2 cut(s)	359, 2431
BfaI	CTAG	5 cut(s)	864, 1323, 1422, 1875, 2103
BfmI	CTRYAG	1 cut(s)	434
BfuI	GTATCC	2 cut(s)	304, 982
BglII	AGATCT	1 cut(s)	958
BisI	GCNGC	8 cut(s)	21, 24, 150, 247, 659, 1837, 2287, 2313
BlnI	CCTAGG	2 cut(s)	1421, 1874
BlsI	GCNGC	8 cut(s)	22, 25, 151, 248, 660, 1838, 2288, 2314
BmcAI	AGTACT	1 cut(s)	1034
Bme18I	GGWCC	8 cut(s)	141, 470, 517, 542, 614, 686, 733, 2264
BmeT110I	CYCGRG	3 cut(s)	962, 1480, 2251
BmiI	GGNNCC	2 cut(s)	1207, 1633
BmsI	GCATC	2 cut(s)	908, 1422
BpiI	GAAGAC	1 cut(s)	191
BplI	GAGNNNNNCTC	2 cut(s)	1150, 1182
BpmI	CTGGAG	1 cut(s)	1013
BpuEI	CTTGAG	5 cut(s)	1124, 1378, 1378, 1586, 1876
Bsa29I	ATCGAT	2 cut(s)	485, 629
BsaBI	GATNNNNATC	5 cut(s)	413, 485, 629, 874, 941
BsaI	GGTCTC	1 cut(s)	359
BsaJI	CCNNGG	2 cut(s)	1421, 1874
BsaWI	WCCGGW	4 cut(s)	323, 467, 539, 611
BsaXI	ACNNNNNCTCC	4 cut(s)	521, 551, 593, 623
Bsc4I	CCNNNNNNNGG	1 cut(s)	2116
Bse1I	ACTGG	8 cut(s)	257, 938, 1001, 1030, 1129, 1342, 1847, 2452
Bse3DI	GCAATG	2 cut(s)	2270, 2281
Bse8I	GATNNNNATC	5 cut(s)	413, 485, 629, 874, 941
BseCI	ATCGAT	2 cut(s)	485, 629
BseDI	CCNNGG	2 cut(s)	1421, 1874
BseGI	GGATG	3 cut(s)	839, 1437, 1851
BseJI	GATNNNNATC	5 cut(s)	413, 485, 629, 874, 941
BseLI	CCNNNNNNNGG	1 cut(s)	2116
BseMI	GCAATG	2 cut(s)	2270, 2281
BseMII	CTCAG	3 cut(s)	679, 696, 2304
BseNI	ACTGG	8 cut(s)	257, 938, 1001, 1030, 1129, 1342, 1847, 2452
BseRI	GAGGAG	1 cut(s)	1726
BseXI	GCAGC	8 cut(s)	10, 32, 161, 233, 645, 1848, 2298, 2299
BsgI	GTGCAG	1 cut(s)	1584
Bsh1285I	CGRYCG	1 cut(s)	489
BshFI	GGCC	6 cut(s)	176, 399, 1222, 1267, 1287, 2194
BshNI	GGYRCC	1 cut(s)	1631
BshVI	ATCGAT	2 cut(s)	485, 629
BsiEI	CGRYCG	1 cut(s)	489
BsiHKAI	GWGCWC	1 cut(s)	1508
BsiHKCI	CYCGRG	3 cut(s)	962, 1480, 2251
BsiSI	CCGG	7 cut(s)	324, 468, 540, 612, 1410, 1629, 2309
BslFI	GGGAC	1 cut(s)	2281
BslI	CCNNNNNNNGG	1 cut(s)	2116
BsmAI	GTCTC	2 cut(s)	359, 2431
BsmFI	GGGAC	1 cut(s)	2281
BsnI	GGCC	6 cut(s)	176, 399, 1222, 1267, 1287, 2194
Bso31I	GGTCTC	1 cut(s)	359
BsoBI	CYCGRG	3 cut(s)	962, 1480, 2251
Bsp1286I	GDGCHC	1 cut(s)	1508
BspANI	GGCC	6 cut(s)	176, 399, 1222, 1267, 1287, 2194
BspCNI	CTCAG	3 cut(s)	678, 695, 2303
BspDI	ATCGAT	2 cut(s)	485, 629
BspHI	TCATGA	1 cut(s)	928
BspLI	GGNNCC	2 cut(s)	1207, 1633
BspMAI	CTGCAG	1 cut(s)	438
BspPI	GGATC	6 cut(s)	200, 816, 974, 1865, 2222, 2300
BspT107I	GGYRCC	1 cut(s)	1631
BspTNI	GGTCTC	1 cut(s)	359
BsrDI	GCAATG	2 cut(s)	2270, 2281
BsrI	ACTGG	8 cut(s)	257, 938, 1001, 1030, 1129, 1342, 1847, 2452
BssECI	CCNNGG	2 cut(s)	1421, 1874
BssSI	CACGAG	1 cut(s)	1289
BssT1I	CCWWGG	2 cut(s)	1421, 1874
Bst2BI	CACGAG	1 cut(s)	1289
Bst4CI	ACNGT	2 cut(s)	726, 1196
Bst6I	CTCTTC	3 cut(s)	159, 1173, 1983
BstAPI	GCANNNNNTGC	3 cut(s)	243, 267, 658
BstC8I	GCNNGC	5 cut(s)	7, 154, 1249, 1832, 2368
BstDEI	CTNAG	7 cut(s)	665, 682, 788, 1238, 1313, 2156, 2290
BstF5I	GGATG	3 cut(s)	839, 1437, 1851
BstHHI	GCGC	2 cut(s)	663, 1836
BstMAI	GTCTC	2 cut(s)	359, 2431
BstMCI	CGRYCG	1 cut(s)	489
BstMWI	GCNNNNNNNGC	6 cut(s)	243, 267, 658, 1248, 1503, 1836
BstNSI	RCATGY	1 cut(s)	1794
BstSFI	CTRYAG	1 cut(s)	434
BstV1I	GCAGC	8 cut(s)	10, 32, 161, 233, 645, 1848, 2298, 2299
BstV2I	GAAGAC	1 cut(s)	191
BstX2I	RGATCY	4 cut(s)	205, 808, 958, 966
BstYI	RGATCY	4 cut(s)	205, 808, 958, 966
Bsu15I	ATCGAT	2 cut(s)	485, 629
BsuI	GTATCC	2 cut(s)	304, 982
BsuRI	GGCC	6 cut(s)	176, 399, 1222, 1267, 1287, 2194
BsuTUI	ATCGAT	2 cut(s)	485, 629
BtsCI	GGATG	3 cut(s)	839, 1437, 1851
BtsIMutI	CAGTG	2 cut(s)	1008, 2298
Cac8I	GCNNGC	5 cut(s)	7, 154, 1249, 1832, 2368
CaiI	CAGNNNCTG	3 cut(s)	658, 730, 1842
CciI	TCATGA	1 cut(s)	928
CfoI	GCGC	2 cut(s)	663, 1836
ClaI	ATCGAT	2 cut(s)	485, 629
Csp6I	GTAC	2 cut(s)	327, 1033
CviAII	CATG	9 cut(s)	257, 699, 825, 929, 1791, 2005, 2078, 2137, 2433
CviQI	GTAC	2 cut(s)	327, 1033
DdeI	CTNAG	7 cut(s)	665, 682, 788, 1238, 1313, 2156, 2290
DraI	TTTAAA	1 cut(s)	1449
EaeI	YGGCCR	2 cut(s)	1220, 1285
Eam1104I	CTCTTC	3 cut(s)	159, 1173, 1983
EarI	CTCTTC	3 cut(s)	159, 1173, 1983
Eco130I	CCWWGG	2 cut(s)	1421, 1874
Eco31I	GGTCTC	1 cut(s)	359
Eco32I	GATATC	3 cut(s)	411, 483, 627
Eco47I	GGWCC	8 cut(s)	141, 470, 517, 542, 614, 686, 733, 2264
Eco57I	CTGAAG	2 cut(s)	1028, 1727
Eco88I	CYCGRG	3 cut(s)	962, 1480, 2251
EcoO109I	RGGNCCY	2 cut(s)	175, 1265
EcoRI	GAATTC	1 cut(s)	185
EcoRV	GATATC	3 cut(s)	411, 483, 627
EcoT14I	CCWWGG	2 cut(s)	1421, 1874
ErhI	CCWWGG	2 cut(s)	1421, 1874
FaeI	CATG	9 cut(s)	260, 702, 828, 932, 1794, 2008, 2081, 2140, 2436
FalI	AAGNNNNNCTT	6 cut(s)	1699, 1731, 2463, 2495, 2468, 2500
FaqI	GGGAC	1 cut(s)	2281
FatI	CATG	9 cut(s)	256, 698, 824, 928, 1790, 2004, 2077, 2136, 2432
Fnu4HI	GCNGC	8 cut(s)	21, 24, 150, 247, 659, 1837, 2287, 2313
FokI	GGATG	3 cut(s)	826, 1444, 1858
Fsp4HI	GCNGC	8 cut(s)	21, 24, 150, 247, 659, 1837, 2287, 2313
FspBI	CTAG	5 cut(s)	864, 1323, 1422, 1875, 2103
FspI	TGCGCA	1 cut(s)	1835
GlaI	GCGC	2 cut(s)	662, 1835
GluI	GCNGC	8 cut(s)	21, 24, 150, 247, 659, 1837, 2287, 2313
GsuI	CTGGAG	1 cut(s)	1013
HaeIII	GGCC	6 cut(s)	176, 399, 1222, 1267, 1287, 2194
HapII	CCGG	7 cut(s)	324, 468, 540, 612, 1410, 1629, 2309
HhaI	GCGC	2 cut(s)	663, 1836
Hin1II	CATG	9 cut(s)	260, 702, 828, 932, 1794, 2008, 2081, 2140, 2436
Hin6I	GCGC	2 cut(s)	661, 1834
HinP1I	GCGC	2 cut(s)	661, 1834
HindIII	AAGCTT	2 cut(s)	1240, 2477
HinfI	GANTC	9 cut(s)	373, 875, 937, 1050, 1381, 1489, 1561, 1568, 1935
HpaII	CCGG	7 cut(s)	324, 468, 540, 612, 1410, 1629, 2309
HphI	GGTGA	4 cut(s)	1086, 1390, 2005, 2431
Hpy166II	GTNNAC	7 cut(s)	329, 473, 545, 689, 980, 1701, 2264
Hpy188III	TCNNGA	9 cut(s)	203, 770, 929, 964, 1323, 1385, 1395, 1565, 2459
Hpy8I	GTNNAC	7 cut(s)	329, 473, 545, 689, 980, 1701, 2264
HpyCH4III	ACNGT	2 cut(s)	726, 1196
HpyCH4IV	ACGT	2 cut(s)	921, 1176
HpyF10VI	GCNNNNNNNGC	6 cut(s)	243, 267, 658, 1248, 1503, 1836
HpyF3I	CTNAG	7 cut(s)	665, 682, 788, 1238, 1313, 2156, 2290
HpySE526I	ACGT	2 cut(s)	921, 1176
Hsp92II	CATG	9 cut(s)	260, 702, 828, 932, 1794, 2008, 2081, 2140, 2436
HspAI	GCGC	2 cut(s)	661, 1834
LmnI	GCTCC	2 cut(s)	655, 1511
Lsp1109I	GCAGC	8 cut(s)	10, 32, 161, 233, 645, 1848, 2298, 2299
LweI	GCATC	2 cut(s)	908, 1422
MaeI	CTAG	5 cut(s)	864, 1323, 1422, 1875, 2103
MaeII	ACGT	2 cut(s)	921, 1176
MaeIII	GTNAC	3 cut(s)	284, 1228, 2105
MfeI	CAATTG	1 cut(s)	558
MflI	RGATCY	4 cut(s)	205, 808, 958, 966
MhlI	GDGCHC	1 cut(s)	1508
MlsI	TGGCCA	2 cut(s)	1222, 1287
MluNI	TGGCCA	2 cut(s)	1222, 1287
MlyI	GAGTC	4 cut(s)	1059, 1390, 1577, 1929
MmeI	TCCRAC	4 cut(s)	575, 719, 1033, 2255
Mox20I	TGGCCA	2 cut(s)	1222, 1287
MroXI	GAANNNNTTC	4 cut(s)	496, 640, 1143, 1659
MscI	TGGCCA	2 cut(s)	1222, 1287
MseI	TTAA	9 cut(s)	68, 797, 1037, 1133, 1448, 1538, 1889, 2123, 2165
MslI	CAYNNNNRTG	1 cut(s)	1525
Msp20I	TGGCCA	2 cut(s)	1222, 1287
MspA1I	CMGCKG	1 cut(s)	23
MspI	CCGG	7 cut(s)	324, 468, 540, 612, 1410, 1629, 2309
MunI	CAATTG	1 cut(s)	558
MwoI	GCNNNNNNNGC	6 cut(s)	243, 267, 658, 1248, 1503, 1836
NlaIII	CATG	9 cut(s)	260, 702, 828, 932, 1794, 2008, 2081, 2140, 2436
NlaIV	GGNNCC	2 cut(s)	1207, 1633
NsbI	TGCGCA	1 cut(s)	1835
NspI	RCATGY	1 cut(s)	1794
PagI	TCATGA	1 cut(s)	928
PdmI	GAANNNNTTC	4 cut(s)	496, 640, 1143, 1659
PfeI	GAWTC	5 cut(s)	373, 875, 937, 1489, 1561
PkrI	GCNGC	8 cut(s)	22, 25, 151, 248, 660, 1838, 2288, 2314
Ple19I	CGATCG	1 cut(s)	489
PleI	GAGTC	4 cut(s)	1058, 1389, 1576, 1929
PpsI	GAGTC	4 cut(s)	1058, 1389, 1576, 1929
PspN4I	GGNNCC	2 cut(s)	1207, 1633
PstI	CTGCAG	1 cut(s)	438
PstNI	CAGNNNCTG	3 cut(s)	658, 730, 1842
PsuI	RGATCY	4 cut(s)	205, 808, 958, 966
PvuI	CGATCG	1 cut(s)	489
PvuII	CAGCTG	1 cut(s)	23
RsaI	GTAC	2 cut(s)	328, 1034
RsaNI	GTAC	2 cut(s)	327, 1033
RseI	CAYNNNNRTG	1 cut(s)	1525
SaqAI	TTAA	9 cut(s)	68, 797, 1037, 1133, 1448, 1538, 1889, 2123, 2165
SatI	GCNGC	8 cut(s)	21, 24, 150, 247, 659, 1837, 2287, 2313
ScaI	AGTACT	1 cut(s)	1034
SchI	GAGTC	4 cut(s)	1059, 1390, 1577, 1929
SduI	GDGCHC	1 cut(s)	1508
SfaNI	GCATC	2 cut(s)	908, 1422
SfcI	CTRYAG	1 cut(s)	434
SinI	GGWCC	8 cut(s)	141, 470, 517, 542, 614, 686, 733, 2264
SmiMI	CAYNNNNRTG	1 cut(s)	1525
SmlI	CTYRAG	5 cut(s)	1103, 1357, 1393, 1565, 1855
SmoI	CTYRAG	5 cut(s)	1103, 1357, 1393, 1565, 1855
SspI	AATATT	1 cut(s)	108
SspMI	CTAG	5 cut(s)	864, 1323, 1422, 1875, 2103
StyI	CCWWGG	2 cut(s)	1421, 1874
TaaI	ACNGT	2 cut(s)	726, 1196
TaiI	ACGT	2 cut(s)	924, 1179
TaqI	TCGA	6 cut(s)	294, 417, 485, 629, 1884, 2226
TatI	WGTACW	1 cut(s)	1032
TfiI	GAWTC	5 cut(s)	373, 875, 937, 1489, 1561
Tru1I	TTAA	9 cut(s)	68, 797, 1037, 1133, 1448, 1538, 1889, 2123, 2165
Tru9I	TTAA	9 cut(s)	68, 797, 1037, 1133, 1448, 1538, 1889, 2123, 2165
TscAI	CASTG	2 cut(s)	1008, 2298
TseI	GCWGC	8 cut(s)	20, 23, 149, 246, 658, 1836, 2286, 2312
TspGWI	ACGGA	1 cut(s)	774
TspRI	CASTG	2 cut(s)	1008, 2298
VpaK11BI	GGWCC	8 cut(s)	141, 470, 517, 542, 614, 686, 733, 2264
XapI	RAATTY	7 cut(s)	185, 502, 574, 646, 1022, 1056, 2167
XbaI	TCTAGA	1 cut(s)	1322
XceI	RCATGY	1 cut(s)	1794
XcmI	CCANNNNNNNNNTGG	2 cut(s)	696, 1524
XmaJI	CCTAGG	2 cut(s)	1421, 1874
XmnI	GAANNNNTTC	4 cut(s)	496, 640, 1143, 1659
XspI	CTAG	5 cut(s)	864, 1323, 1422, 1875, 2103
ZrmI	AGTACT	1 cut(s)	1034

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.