RLG00000024262

Belongs to the SKP1 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Forward (+)
33664975 .. 33669100
4126 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024262

Sequence Viewer

Length: 1365 bp
ATGTCGACTTCCGCAGCACCAGCAGAGAATACTAAGAAGATGTTCACCCTCATGAGCTCCGACGGCGAGTCATTCGAGTCGCAGACGATCAAGGGCATGATCGAGGACGACTGCACCGAGGGCGGCATTCCTCTCCCGAACGTGACCGGCGAGATCCTGGCCAAGGTCATCGAGGAGTTCGTGAAGGAGTTTGAGGCGGCCCAGAACGTGTTGTTCGATATGATTCTGGCGGCGAATTACTTGAACATTAAGGGCTTGTTGGATGCGACGTGTGAACATGTTGCGAGCATGATTAAGGGGAAGAGCCCGGAGGAGATCAGAAAAAAATTCCATATCAAGAATGATTACACTCCGGAGGAAGAGGAAGAGTCTTCGACCTCTCATACATGCAACACGTACAACTTCAACTCTTCATTACCTCAATGGCTATTCAACATTAGTACCCTTGTGACAATTAATCTTGCTAATTGTCACCTCGCTGGCTCCATTAGGGAAACTTCATGGGTAAATCTTTGCAGCTTGCAGAGTTTAGATCTATTTGGCAATTCCATTAGTGGAGGAATGGAGGAGTTTCTTCATTCTTTGTCTGGGCCCACTCCCAATGTCAATCGGAAATCTGTCACATTTGTCAATGCTAGACCTTTCGTTCAACGTGAGGAACAGCATTTCAGAGAGTATTGGATAGCTTGCAGAAATGTTTTCCTAGGAGCCAACATCTTCACTGGGAACATTCCTGAACAATTTTGTCAACTCCTTCTTAAGGTCTTAGACCTTTCTCCGAATAATATACTAGGTTCTATCTCTAAATGTCTTGGCAATCTTGAAGTCATGAAAGATGTGGGTATCATGTTTAAGTTACCACCCTCCTTCTGGCAACCACCACCGAGTGTATATTTGGAATTAATTCTGAAGGGAAAACTATATGAATATTCTGATCTAATAGGAAGAATACCAGAGAGTATTGGAAGCTTGAGCCGCTTAGAATCTCTTGACCTCTCGAGTAACCATCTTTGTGGTCCAATTCCTCTGAGCATGACTTCTATGACTTCATTGAGCATATTGAACTTATCATACAACAACTTGTCCGGGCCTATTCCATCAGCGAACCAATTCCAAACCTTCAATGACCCAAGCATATTTGAAGGAAACTTGGGACTTTGTGGGAACCCATTACCAATACAATGCTCAGCTTTCGACTATGGTGATGCACAAGTTAAAGAGAACACAGTTGAAGATGAAGATGGTTATGAAAATCTATGGTTCTATAAAAGCACAGGATTTGGATTCATTGTGGGATTCTGGGTTGTTTTTGGCAGTTTGGTGATTAAGAGGTCCTGGAGACATGCCTCTTTCCAGTTATCTTGA

Protein Analysis

455

Amino Acids

50.53

Weight (kDa)

4.88

Isoelectric Point (pI)

45.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Skp1_POZ PF03931 13 - 58 7.8e-14 Skp1 family, tetramerisation domain
Skp1 PF01466 84 - 123 3.9e-21 Skp1 family, dimerisation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000285)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47885
fragaria_vesca FvH4_3g09550 FvH4_4g32560
malus_domestica MD01G1172200.v1.1
rosa_chinensis RchiOBHm_Chr1g0353911 RchiOBHm_Chr1g0354141 RchiOBHm_Chr1g0354151 RchiOBHm_Chr1g0354161 RchiOBHm_Chr1g0354191 RchiOBHm_Chr1g0354201 RchiOBHm_Chr1g0354221 RchiOBHm_Chr1g0354271 RchiOBHm_Chr1g0354301 RchiOBHm_Chr1g0354321 RchiOBHm_Chr1g0354371 RchiOBHm_Chr1g0354401 RchiOBHm_Chr1g0354411 RchiOBHm_Chr1g0354451 RchiOBHm_Chr1g0354551 RchiOBHm_Chr1g0359231 RchiOBHm_Chr3g0470501 RchiOBHm_Chr4g0440611 RchiOBHm_Chr4g0440631 RchiOBHm_Chr4g0441421 RchiOBHm_Chr4g0441431 RchiOBHm_Chr5g0015191 RchiOBHm_Chr5g0022441 RchiOBHm_Chr7g0207081
rosa_laevigata RLG00000009355 RLG00000009356 RLG00000023813 RLG00000024262 RLG00000028199 RLG00000028200 RLG00000028204 RLG00000028209 RLG00000028211 RLG00000028214 RLG00000028216 RLG00000028220 RLG00000028221 RLG00000028223 RLG00000028224 RLG00000028886 RLG00000029706 RLG00000032176
rosa_multiflora Rmu_co8366321.1_g000001 Rmu_sc0001926.1_g000008 Rmu_sc0001926.1_g000009 Rmu_sc0002115.1_g000006 Rmu_sc0002115.1_g000007 Rmu_sc0002209.1_g000020 Rmu_sc0002737.1_g000005 Rmu_sc0002737.1_g000009 Rmu_sc0002737.1_g000015 Rmu_sc0002737.1_g000016 Rmu_sc0002737.1_g000018 Rmu_sc0002930.1_g000003 Rmu_sc0002930.1_g000005 Rmu_sc0003292.1_g000004 Rmu_sc0003360.1_g000004 Rmu_sc0003360.1_g000005 Rmu_sc0003381.1_g000013 Rmu_sc0004299.1_g000001 Rmu_sc0007159.1_g000001 Rmu_sc0007159.1_g000007 Rmu_sc0009777.1_g000002 Rmu_sc0010755.1_g000002 Rmu_sc0012353.1_g000001 Rmu_sc0012562.1_g000003 Rmu_sc0012562.1_g000004 Rmu_sc0012562.1_g000006 Rmu_sc0012562.1_g000013 Rmu_sc0012562.1_g000021 Rmu_sc0015525.1_g000001 Rmu_sc0015525.1_g000005 Rmu_sc0018378.1_g000001 Rmu_sc0022127.1_g000002 Rmu_sc0022144.1_g000002 Rmu_sc0035791.1_g000001
rosa_roxburghii Rroxscaffold_1G00056680 Rroxscaffold_1G00061360 Rroxscaffold_3G00236900 Rroxscaffold_4G00300940 Rroxscaffold_4G00301040 Rroxscaffold_4G00301050 Rroxscaffold_4G00301070 Rroxscaffold_4G00301100 Rroxscaffold_4G00301110 Rroxscaffold_4G00301930 Rroxscaffold_4G00301940 Rroxscaffold_4G00301950 Rroxscaffold_7G00202690
rosa_rugosa Rorug01G0242000 Rorug01G0242100 Rorug01G0242200 Rorug01G0242300 Rorug01G0242700 Rorug01G0242900 Rorug01G0243000 Rorug03G0109600 Rorug03G0109700 Rorug04G0327000 Rorug04G0333500 Rorug04G0333600 Rorug05G0024600 RorugPtG0003000
rosa_samantha Rh1AG253200 Rh1AG253400 Rh1BG225200 Rh1CG177100 Rh1CG234500 Rh1CG237000 Rh1DG252000 Rh1DG252400 Rh1DG252900 Rh3CG085900 Rh4BG399300 Rh4DG391900
rosa_wichuraiana Rw1G015760 Rw1G022030 Rw1G022100 Rw1G022120 Rw1G022230 Rw5G010290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 5
AccIII TCCGGA 1 cut(s) 352
AciI CCGC 5 cut(s) 12, 123, 197, 230, 976
AclWI GGATC 1 cut(s) 148
AcoI YGGCCR 1 cut(s) 159
AcsI RAATTY 1 cut(s) 326
AcuI CTGAAG 1 cut(s) 929
AdeI CACNNNGTG 1 cut(s) 887
AfaI GTAC 2 cut(s) 398, 442
AfiI CCNNNNNNNGG 3 cut(s) 163, 760, 870
AflII CTTAAG 1 cut(s) 758
AflIII ACRYGT 4 cut(s) 207, 269, 277, 393
AgsI TTSAA 9 cut(s) 244, 406, 433, 650, 824, 1063, 1123, 1142, 1232
AhdI GACNNNNNGTC 1 cut(s) 67
AjiI CACGTC 1 cut(s) 270
AjnI CCWGG 2 cut(s) 156, 1334
AluBI AGCT 5 cut(s) 57, 519, 686, 969, 1190
AluI AGCT 5 cut(s) 57, 519, 686, 969, 1190
Alw21I GWGCWC 1 cut(s) 59
Alw26I GTCTC 1 cut(s) 1333
AlwI GGATC 1 cut(s) 148
Ama87I CYCGRG 1 cut(s) 997
Aor13HI TCCGGA 1 cut(s) 352
AoxI GGCC 4 cut(s) 159, 198, 590, 1088
ApaI GGGCCC 1 cut(s) 594
ApeKI GCWGC 2 cut(s) 14, 516
ApoI RAATTY 1 cut(s) 326
AseI ATTAAT 2 cut(s) 456, 902
Asp700I GAANNNNTTC 3 cut(s) 41, 903, 1109
AspA2I CCTAGG 1 cut(s) 703
AspS9I GGNCC 6 cut(s) 199, 590, 591, 1016, 1088, 1332
AsuC2I CCSGG 2 cut(s) 308, 1087
AsuHPI GGTGA 4 cut(s) 37, 464, 1214, 1333
AvaI CYCGRG 1 cut(s) 997
AvaII GGWCC 2 cut(s) 1016, 1332
AvrII CCTAGG 1 cut(s) 703
BaeGI GKGCMC 1 cut(s) 594
BaeI ACNNNNGTAYC 2 cut(s) 424, 457
BalI TGGCCA 1 cut(s) 161
BanII GRGCYC 3 cut(s) 59, 308, 594
BbsI GAAGAC 1 cut(s) 363
Bbv12I GWGCWC 1 cut(s) 59
BbvI GCAGC 2 cut(s) 26, 528
BccI CCATC 3 cut(s) 1014, 1105, 1235
BceAI ACGGC 1 cut(s) 79
BciT130I CCWGG 2 cut(s) 158, 1336
BcnI CCSGG 2 cut(s) 308, 1087
BcoDI GTCTC 1 cut(s) 1333
BfaI CTAG 3 cut(s) 636, 704, 791
BfrI CTTAAG 1 cut(s) 758
BglII AGATCT 1 cut(s) 532
BisI GCNGC 6 cut(s) 15, 124, 198, 231, 517, 976
BlnI CCTAGG 1 cut(s) 703
BlpI GCTNAGC 1 cut(s) 1186
BlsI GCNGC 6 cut(s) 16, 125, 199, 232, 518, 977
Bme1390I CCNGG 4 cut(s) 158, 308, 1087, 1336
Bme18I GGWCC 2 cut(s) 1016, 1332
BmeRI GACNNNNNGTC 1 cut(s) 67
BmeT110I CYCGRG 1 cut(s) 997
BmgBI CACGTC 1 cut(s) 270
BmgT120I GGNCC 6 cut(s) 199, 590, 591, 1016, 1088, 1332
BmiI GGNNCC 4 cut(s) 484, 592, 709, 1166
BmrFI CCNGG 4 cut(s) 158, 308, 1087, 1336
BmrI ACTGGG 1 cut(s) 732
BmsI GCATC 2 cut(s) 253, 1195
BmuI ACTGGG 1 cut(s) 732
BpiI GAAGAC 1 cut(s) 363
BpmI CTGGAG 1 cut(s) 1357
Bpu1102I GCTNAGC 1 cut(s) 1186
BpuEI CTTGAG 1 cut(s) 991
BpuMI CCSGG 2 cut(s) 308, 1087
BsaAI YACGTR 1 cut(s) 396
BsaJI CCNNGG 3 cut(s) 117, 162, 703
BsaWI WCCGGW 1 cut(s) 352
Bsc4I CCNNNNNNNGG 3 cut(s) 163, 760, 870
Bse118I RCCGGY 1 cut(s) 146
Bse1I ACTGG 2 cut(s) 727, 1354
BseAI TCCGGA 1 cut(s) 352
BseBI CCWGG 2 cut(s) 158, 1336
BseDI CCNNGG 3 cut(s) 117, 162, 703
BseGI GGATG 1 cut(s) 268
BseLI CCNNNNNNNGG 3 cut(s) 163, 760, 870
BseMII CTCAG 2 cut(s) 1019, 1200
BseNI ACTGG 2 cut(s) 727, 1354
BseRI GAGGAG 3 cut(s) 188, 326, 581
BseSI GKGCMC 1 cut(s) 594
BseXI GCAGC 2 cut(s) 26, 528
BsgI GTGCAG 1 cut(s) 97
BshFI GGCC 4 cut(s) 161, 200, 592, 1090
BsiHKAI GWGCWC 1 cut(s) 59
BsiHKCI CYCGRG 1 cut(s) 997
BsiSI CCGG 4 cut(s) 147, 308, 353, 1086
BslFI GGGAC 1 cut(s) 1167
BslI CCNNNNNNNGG 3 cut(s) 163, 760, 870
BsmAI GTCTC 1 cut(s) 1333
BsmFI GGGAC 1 cut(s) 1167
BsmI GAATGC 1 cut(s) 126
BsnI GGCC 4 cut(s) 161, 200, 592, 1090
BsoBI CYCGRG 1 cut(s) 997
Bsp120I GGGCCC 1 cut(s) 590
Bsp1286I GDGCHC 3 cut(s) 59, 308, 594
Bsp13I TCCGGA 1 cut(s) 352
Bsp143I GATC 6 cut(s) 87, 99, 153, 315, 532, 934
Bsp1720I GCTNAGC 1 cut(s) 1186
BspACI CCGC 5 cut(s) 12, 123, 197, 230, 976
BspANI GGCC 4 cut(s) 161, 200, 592, 1090
BspCNI CTCAG 2 cut(s) 1020, 1199
BspEI TCCGGA 1 cut(s) 352
BspHI TCATGA 2 cut(s) 51, 828
BspLI GGNNCC 4 cut(s) 484, 592, 709, 1166
BspPI GGATC 1 cut(s) 148
BspQI GCTCTTC 1 cut(s) 296
BspTI CTTAAG 1 cut(s) 758
BsrFI RCCGGY 1 cut(s) 146
BsrI ACTGG 2 cut(s) 727, 1354
BssAI RCCGGY 1 cut(s) 146
BssECI CCNNGG 3 cut(s) 117, 162, 703
BssMI GATC 6 cut(s) 87, 99, 153, 315, 532, 934
BssT1I CCWWGG 2 cut(s) 162, 703
Bst2UI CCWGG 2 cut(s) 158, 1336
Bst4CI ACNGT 1 cut(s) 1228
Bst6I CTCTTC 4 cut(s) 296, 354, 360, 415
BstAFI CTTAAG 1 cut(s) 758
BstBAI YACGTR 1 cut(s) 396
BstC8I GCNNGC 4 cut(s) 286, 481, 521, 688
BstDEI CTNAG 5 cut(s) 33, 766, 979, 1028, 1186
BstENI CCTNNNNNAGG 2 cut(s) 161, 758
BstF5I GGATG 1 cut(s) 268
BstKTI GATC 6 cut(s) 90, 102, 156, 318, 535, 937
BstMAI GTCTC 1 cut(s) 1333
BstMBI GATC 6 cut(s) 87, 99, 153, 315, 532, 934
BstMWI GCNNNNNNNGC 4 cut(s) 20, 63, 120, 975
BstNI CCWGG 2 cut(s) 158, 1336
BstNSI RCATGY 3 cut(s) 281, 390, 1346
BstSCI CCNGG 4 cut(s) 156, 306, 1085, 1334
BstSLI GKGCMC 1 cut(s) 594
BstV1I GCAGC 2 cut(s) 26, 528
BstV2I GAAGAC 1 cut(s) 363
BstX2I RGATCY 2 cut(s) 153, 532
BstXI CCANNNNNNTGG 1 cut(s) 1013
BstYI RGATCY 2 cut(s) 153, 532
BsuRI GGCC 4 cut(s) 161, 200, 592, 1090
BtrI CACGTC 1 cut(s) 270
BtsCI GGATG 1 cut(s) 268
BtsIMutI CAGTG 1 cut(s) 720
Cac8I GCNNGC 4 cut(s) 286, 481, 521, 688
CciI TCATGA 2 cut(s) 51, 828
Cfr10I RCCGGY 1 cut(s) 146
Cfr13I GGNCC 6 cut(s) 199, 590, 591, 1016, 1088, 1332
Csp6I GTAC 2 cut(s) 397, 441
CviQI GTAC 2 cut(s) 397, 441
DdeI CTNAG 5 cut(s) 33, 766, 979, 1028, 1186
DpnI GATC 6 cut(s) 89, 101, 155, 317, 534, 936
DpnII GATC 6 cut(s) 87, 99, 153, 315, 532, 934
DraIII CACNNNGTG 1 cut(s) 887
DriI GACNNNNNGTC 1 cut(s) 67
EaeI YGGCCR 1 cut(s) 159
Eam1104I CTCTTC 4 cut(s) 296, 354, 360, 415
Eam1105I GACNNNNNGTC 1 cut(s) 67
EarI CTCTTC 4 cut(s) 296, 354, 360, 415
Ecl136II GAGCTC 1 cut(s) 57
Eco130I CCWWGG 2 cut(s) 162, 703
Eco24I GRGCYC 3 cut(s) 59, 308, 594
Eco47I GGWCC 2 cut(s) 1016, 1332
Eco53kI GAGCTC 1 cut(s) 57
Eco57I CTGAAG 1 cut(s) 929
Eco88I CYCGRG 1 cut(s) 997
EcoICRI GAGCTC 1 cut(s) 57
EcoNI CCTNNNNNAGG 2 cut(s) 161, 758
EcoO109I RGGNCCY 1 cut(s) 1332
EcoRII CCWGG 2 cut(s) 156, 1334
EcoT14I CCWWGG 2 cut(s) 162, 703
EcoT38I GRGCYC 3 cut(s) 59, 308, 594
ErhI CCWWGG 2 cut(s) 162, 703
FaqI GGGAC 1 cut(s) 1167
FblI GTMKAC 1 cut(s) 5
Fnu4HI GCNGC 6 cut(s) 15, 124, 198, 231, 517, 976
FokI GGATG 1 cut(s) 275
FriOI GRGCYC 3 cut(s) 59, 308, 594
Fsp4HI GCNGC 6 cut(s) 15, 124, 198, 231, 517, 976
FspBI CTAG 3 cut(s) 636, 704, 791
GluI GCNGC 6 cut(s) 15, 124, 198, 231, 517, 976
GsuI CTGGAG 1 cut(s) 1357
HaeIII GGCC 4 cut(s) 161, 200, 592, 1090
HapII CCGG 4 cut(s) 147, 308, 353, 1086
HincII GTYRAC 2 cut(s) 6, 749
HindII GTYRAC 2 cut(s) 6, 749
HindIII AAGCTT 1 cut(s) 967
HinfI GANTC 7 cut(s) 68, 77, 223, 368, 983, 1284, 1296
HpaII CCGG 4 cut(s) 147, 308, 353, 1086
HphI GGTGA 4 cut(s) 37, 464, 1214, 1333
Hpy166II GTNNAC 4 cut(s) 6, 45, 275, 749
Hpy188I TCNGA 8 cut(s) 61, 320, 612, 671, 780, 909, 934, 1029
Hpy8I GTNNAC 4 cut(s) 6, 45, 275, 749
Hpy99I CGWCG 2 cut(s) 65, 271
HpyAV CCTTC 6 cut(s) 178, 764, 877, 904, 1129, 1136
HpyCH4III ACNGT 1 cut(s) 1228
HpyCH4IV ACGT 5 cut(s) 141, 207, 269, 395, 652
HpyCH4V TGCA 6 cut(s) 114, 390, 516, 523, 690, 1208
HpyF10VI GCNNNNNNNGC 4 cut(s) 20, 63, 120, 975
HpyF3I CTNAG 5 cut(s) 33, 766, 979, 1028, 1186
HpySE526I ACGT 5 cut(s) 141, 207, 269, 395, 652
Kpn2I TCCGGA 1 cut(s) 352
Kzo9I GATC 6 cut(s) 87, 99, 153, 315, 532, 934
LguI GCTCTTC 1 cut(s) 296
LmnI GCTCC 3 cut(s) 62, 488, 707
Lsp1109I GCAGC 2 cut(s) 26, 528
LweI GCATC 2 cut(s) 253, 1195
MaeI CTAG 3 cut(s) 636, 704, 791
MaeII ACGT 5 cut(s) 141, 207, 269, 395, 652
MaeIII GTNAC 6 cut(s) 142, 448, 470, 619, 855, 1001
MalI GATC 6 cut(s) 89, 101, 155, 317, 534, 936
MboI GATC 6 cut(s) 87, 99, 153, 315, 532, 934
MflI RGATCY 2 cut(s) 153, 532
MhlI GDGCHC 3 cut(s) 59, 308, 594
MlsI TGGCCA 1 cut(s) 161
MluNI TGGCCA 1 cut(s) 161
MlyI GAGTC 3 cut(s) 77, 86, 377
MmeI TCCRAC 2 cut(s) 84, 240
Mox20I TGGCCA 1 cut(s) 161
MroI TCCGGA 1 cut(s) 352
MroXI GAANNNNTTC 3 cut(s) 41, 903, 1109
MscI TGGCCA 1 cut(s) 161
MseI TTAA 8 cut(s) 249, 294, 456, 759, 852, 902, 1215, 1326
MslI CAYNNNNRTG 2 cut(s) 50, 1011
Msp20I TGGCCA 1 cut(s) 161
MspCI CTTAAG 1 cut(s) 758
MspI CCGG 4 cut(s) 147, 308, 353, 1086
MspR9I CCNGG 4 cut(s) 158, 308, 1087, 1336
Mva1269I GAATGC 1 cut(s) 126
MvaI CCWGG 2 cut(s) 158, 1336
MwoI GCNNNNNNNGC 4 cut(s) 20, 63, 120, 975
NciI CCSGG 2 cut(s) 308, 1087
NdeII GATC 6 cut(s) 87, 99, 153, 315, 532, 934
NlaIV GGNNCC 4 cut(s) 484, 592, 709, 1166
NmuCI GTSAC 4 cut(s) 142, 448, 470, 619
NspI RCATGY 3 cut(s) 281, 390, 1346
PaeR7I CTCGAG 1 cut(s) 997
PagI TCATGA 2 cut(s) 51, 828
PciI ACATGT 1 cut(s) 277
PciSI GCTCTTC 1 cut(s) 296
PcsI WCGNNNNNNNCGW 4 cut(s) 114, 147, 177, 213
PctI GAATGC 1 cut(s) 126
PdmI GAANNNNTTC 3 cut(s) 41, 903, 1109
PfeI GAWTC 4 cut(s) 223, 983, 1284, 1296
PfoI TCCNGGA 1 cut(s) 1334
PkrI GCNGC 6 cut(s) 16, 125, 199, 232, 518, 977
PleI GAGTC 3 cut(s) 76, 85, 376
PpsI GAGTC 3 cut(s) 76, 85, 376
Ppu21I YACGTR 1 cut(s) 396
PpuMI RGGWCCY 1 cut(s) 1332
PscI ACATGT 1 cut(s) 277
PshBI ATTAAT 2 cut(s) 456, 902
Psp124BI GAGCTC 1 cut(s) 59
Psp5II RGGWCCY 1 cut(s) 1332
Psp6I CCWGG 2 cut(s) 156, 1334
PspGI CCWGG 2 cut(s) 156, 1334
PspN4I GGNNCC 4 cut(s) 484, 592, 709, 1166
PspOMI GGGCCC 1 cut(s) 590
PspPI GGNCC 6 cut(s) 199, 590, 591, 1016, 1088, 1332
PspPPI RGGWCCY 1 cut(s) 1332
PsrI GAACNNNNNNTAC 2 cut(s) 1055, 1087
PsuI RGATCY 2 cut(s) 153, 532
RsaI GTAC 2 cut(s) 398, 442
RsaNI GTAC 2 cut(s) 397, 441
RseI CAYNNNNRTG 2 cut(s) 50, 1011
SacI GAGCTC 1 cut(s) 59
SalI GTCGAC 1 cut(s) 4
SapI GCTCTTC 1 cut(s) 296
SaqAI TTAA 8 cut(s) 249, 294, 456, 759, 852, 902, 1215, 1326
SatI GCNGC 6 cut(s) 15, 124, 198, 231, 517, 976
Sau3AI GATC 6 cut(s) 87, 99, 153, 315, 532, 934
Sau96I GGNCC 6 cut(s) 199, 590, 591, 1016, 1088, 1332
SchI GAGTC 3 cut(s) 77, 86, 377
ScrFI CCNGG 4 cut(s) 158, 308, 1087, 1336
SduI GDGCHC 3 cut(s) 59, 308, 594
SfaNI GCATC 2 cut(s) 253, 1195
Sfr274I CTCGAG 1 cut(s) 997
SinI GGWCC 2 cut(s) 1016, 1332
SlaI CTCGAG 1 cut(s) 997
SmiMI CAYNNNNRTG 2 cut(s) 50, 1011
SmlI CTYRAG 3 cut(s) 758, 970, 997
SmoI CTYRAG 3 cut(s) 758, 970, 997
SsiI CCGC 5 cut(s) 12, 123, 197, 230, 976
SspI AATATT 1 cut(s) 929
SspMI CTAG 3 cut(s) 636, 704, 791
SstI GAGCTC 1 cut(s) 59
StyD4I CCNGG 4 cut(s) 156, 306, 1085, 1334
StyI CCWWGG 2 cut(s) 162, 703
TaaI ACNGT 1 cut(s) 1228
TaiI ACGT 5 cut(s) 144, 210, 272, 398, 655
TaqI TCGA 8 cut(s) 5, 75, 102, 171, 216, 374, 998, 1194
TauI GCSGC 4 cut(s) 126, 200, 233, 978
TfiI GAWTC 4 cut(s) 223, 983, 1284, 1296
Tru1I TTAA 8 cut(s) 249, 294, 456, 759, 852, 902, 1215, 1326
Tru9I TTAA 8 cut(s) 249, 294, 456, 759, 852, 902, 1215, 1326
TscAI CASTG 1 cut(s) 727
TseFI GTSAC 4 cut(s) 142, 448, 470, 619
TseI GCWGC 2 cut(s) 14, 516
Tsp45I GTSAC 4 cut(s) 142, 448, 470, 619
TspDTI ATGAA 9 cut(s) 402, 489, 566, 845, 939, 1038, 1251, 1263, 1276
TspRI CASTG 1 cut(s) 727
Vha464I CTTAAG 1 cut(s) 758
VpaK11BI GGWCC 2 cut(s) 1016, 1332
VspI ATTAAT 2 cut(s) 456, 902
XagI CCTNNNNNAGG 2 cut(s) 161, 758
XapI RAATTY 1 cut(s) 326
XceI RCATGY 3 cut(s) 281, 390, 1346
XcmI CCANNNNNNNNNTGG 1 cut(s) 867
XhoI CTCGAG 1 cut(s) 997
XmaJI CCTAGG 1 cut(s) 703
XmiI GTMKAC 1 cut(s) 5
XmnI GAANNNNTTC 3 cut(s) 41, 903, 1109
XspI CTAG 3 cut(s) 636, 704, 791
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.