Rmu_sc0010755.1_g000002

Receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010755.1
Physical Location & Seq
Reverse (-)
3468 .. 3887
420 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010755.1_g000002.1.cds

Sequence Viewer

Length: 420 bp
atgaccgatatgactttgctgagcaaattgaacttgtcatataacgacttgtctgggccaatcccatctgctaaccaattccaaaccttcaatgatccaactttatttgaaggaaacttgggactttgtggcactccattgccaactcagtgctcatcatcccctgatgggaatccagaagttaaagaagatgcaggtgaagatgaagaagggtctggaaagatatggttctatgtaagcactacgatgggattcattctgggattttgggctgtttttggcagtttagtgctaaagaggtcatggagacatgcctatttcaagtttgtcgacgacatgaaagataggctaattctggtaatcacactgaaatgcatggcttgtctacgcagaatgactgaacaagaaagacaaacgtga

Protein Analysis

139

Amino Acids

15.66

Weight (kDa)

4.93

Isoelectric Point (pI)

43.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000285)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47885
fragaria_vesca FvH4_3g09550 FvH4_4g32560
malus_domestica MD01G1172200.v1.1
rosa_chinensis RchiOBHm_Chr1g0353911 RchiOBHm_Chr1g0354141 RchiOBHm_Chr1g0354151 RchiOBHm_Chr1g0354161 RchiOBHm_Chr1g0354191 RchiOBHm_Chr1g0354201 RchiOBHm_Chr1g0354221 RchiOBHm_Chr1g0354271 RchiOBHm_Chr1g0354301 RchiOBHm_Chr1g0354321 RchiOBHm_Chr1g0354371 RchiOBHm_Chr1g0354401 RchiOBHm_Chr1g0354411 RchiOBHm_Chr1g0354451 RchiOBHm_Chr1g0354551 RchiOBHm_Chr1g0359231 RchiOBHm_Chr3g0470501 RchiOBHm_Chr4g0440611 RchiOBHm_Chr4g0440631 RchiOBHm_Chr4g0441421 RchiOBHm_Chr4g0441431 RchiOBHm_Chr5g0015191 RchiOBHm_Chr5g0022441 RchiOBHm_Chr7g0207081
rosa_laevigata RLG00000009355 RLG00000009356 RLG00000023813 RLG00000024262 RLG00000028199 RLG00000028200 RLG00000028204 RLG00000028209 RLG00000028211 RLG00000028214 RLG00000028216 RLG00000028220 RLG00000028221 RLG00000028223 RLG00000028224 RLG00000028886 RLG00000029706 RLG00000032176
rosa_multiflora Rmu_co8366321.1_g000001 Rmu_sc0001926.1_g000008 Rmu_sc0001926.1_g000009 Rmu_sc0002115.1_g000006 Rmu_sc0002115.1_g000007 Rmu_sc0002209.1_g000020 Rmu_sc0002737.1_g000005 Rmu_sc0002737.1_g000009 Rmu_sc0002737.1_g000015 Rmu_sc0002737.1_g000016 Rmu_sc0002737.1_g000018 Rmu_sc0002930.1_g000003 Rmu_sc0002930.1_g000005 Rmu_sc0003292.1_g000004 Rmu_sc0003360.1_g000004 Rmu_sc0003360.1_g000005 Rmu_sc0003381.1_g000013 Rmu_sc0004299.1_g000001 Rmu_sc0007159.1_g000001 Rmu_sc0007159.1_g000007 Rmu_sc0009777.1_g000002 Rmu_sc0010755.1_g000002 Rmu_sc0012353.1_g000001 Rmu_sc0012562.1_g000003 Rmu_sc0012562.1_g000004 Rmu_sc0012562.1_g000006 Rmu_sc0012562.1_g000013 Rmu_sc0012562.1_g000021 Rmu_sc0015525.1_g000001 Rmu_sc0015525.1_g000005 Rmu_sc0018378.1_g000001 Rmu_sc0022127.1_g000002 Rmu_sc0022144.1_g000002 Rmu_sc0035791.1_g000001
rosa_roxburghii Rroxscaffold_1G00056680 Rroxscaffold_1G00061360 Rroxscaffold_3G00236900 Rroxscaffold_4G00300940 Rroxscaffold_4G00301040 Rroxscaffold_4G00301050 Rroxscaffold_4G00301070 Rroxscaffold_4G00301100 Rroxscaffold_4G00301110 Rroxscaffold_4G00301930 Rroxscaffold_4G00301940 Rroxscaffold_4G00301950 Rroxscaffold_7G00202690
rosa_rugosa Rorug01G0242000 Rorug01G0242100 Rorug01G0242200 Rorug01G0242300 Rorug01G0242700 Rorug01G0242900 Rorug01G0243000 Rorug03G0109600 Rorug03G0109700 Rorug04G0327000 Rorug04G0333500 Rorug04G0333600 Rorug05G0024600 RorugPtG0003000
rosa_samantha Rh1AG253200 Rh1AG253400 Rh1BG225200 Rh1CG177100 Rh1CG234500 Rh1CG237000 Rh1DG252000 Rh1DG252400 Rh1DG252900 Rh3CG085900 Rh4BG399300 Rh4DG391900
rosa_wichuraiana Rw1G015760 Rw1G022030 Rw1G022100 Rw1G022120 Rw1G022230 Rw5G010290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 185
Acc36I ACCTGC 1 cut(s) 185
AccI GTMKAC 2 cut(s) 330, 385
AclWI GGATC 1 cut(s) 89
AfiI CCNNNNNNNGG 1 cut(s) 168
AgsI TTSAA 4 cut(s) 31, 91, 110, 322
Alw21I GWGCWC 1 cut(s) 155
Alw26I GTCTC 1 cut(s) 301
AlwI GGATC 1 cut(s) 89
AoxI GGCC 1 cut(s) 56
AspS9I GGNCC 1 cut(s) 56
AsuHPI GGTGA 1 cut(s) 209
Bbv12I GWGCWC 1 cut(s) 155
BccI CCATC 3 cut(s) 73, 161, 241
BcoDI GTCTC 1 cut(s) 301
BfuAI ACCTGC 1 cut(s) 185
BlpI GCTNAGC 1 cut(s) 20
BmgT120I GGNCC 1 cut(s) 56
BmsI GCATC 1 cut(s) 181
Bpu1102I GCTNAGC 1 cut(s) 20
BsaBI GATNNNNATC 1 cut(s) 171
Bsc4I CCNNNNNNNGG 1 cut(s) 168
Bse3DI GCAATG 1 cut(s) 137
Bse8I GATNNNNATC 1 cut(s) 171
BseGI GGATG 1 cut(s) 158
BseJI GATNNNNATC 1 cut(s) 171
BseLI CCNNNNNNNGG 1 cut(s) 168
BseMI GCAATG 1 cut(s) 137
BseMII CTCAG 2 cut(s) 11, 161
BshFI GGCC 1 cut(s) 58
BsiHKAI GWGCWC 1 cut(s) 155
BslFI GGGAC 1 cut(s) 135
BslI CCNNNNNNNGG 1 cut(s) 168
BsmAI GTCTC 1 cut(s) 301
BsmFI GGGAC 1 cut(s) 135
BsnI GGCC 1 cut(s) 58
Bsp1286I GDGCHC 1 cut(s) 155
Bsp143I GATC 1 cut(s) 94
Bsp1720I GCTNAGC 1 cut(s) 20
BspANI GGCC 1 cut(s) 58
BspCNI CTCAG 2 cut(s) 12, 160
BspMI ACCTGC 1 cut(s) 185
BspPI GGATC 1 cut(s) 89
BsrDI GCAATG 1 cut(s) 137
BssMI GATC 1 cut(s) 94
BstDEI CTNAG 2 cut(s) 20, 147
BstF5I GGATG 1 cut(s) 158
BstKTI GATC 1 cut(s) 97
BstMAI GTCTC 1 cut(s) 301
BstMBI GATC 1 cut(s) 94
BstNSI RCATGY 1 cut(s) 314
BsuRI GGCC 1 cut(s) 58
BtsCI GGATG 1 cut(s) 158
BtsIMutI CAGTG 2 cut(s) 155, 365
BveI ACCTGC 1 cut(s) 185
Cfr13I GGNCC 1 cut(s) 56
CviAII CATG 4 cut(s) 303, 311, 337, 376
CviJI RGCY 4 cut(s) 58, 272, 349, 380
CviKI_1 RGCY 4 cut(s) 58, 272, 349, 380
DdeI CTNAG 2 cut(s) 20, 147
DpnI GATC 1 cut(s) 96
DpnII GATC 1 cut(s) 94
EcoT22I ATGCAT 1 cut(s) 377
FaeI CATG 4 cut(s) 306, 314, 340, 379
FaiI YATR 9 cut(s) 11, 40, 42, 226, 234, 304, 312, 338, 377
FaqI GGGAC 1 cut(s) 135
FatI CATG 4 cut(s) 302, 310, 336, 375
FblI GTMKAC 2 cut(s) 330, 385
FokI GGATG 1 cut(s) 145
HaeIII GGCC 1 cut(s) 58
Hin1II CATG 4 cut(s) 306, 314, 340, 379
HincII GTYRAC 1 cut(s) 331
HindII GTYRAC 1 cut(s) 331
HinfI GANTC 2 cut(s) 172, 252
HphI GGTGA 1 cut(s) 209
Hpy166II GTNNAC 2 cut(s) 331, 386
Hpy188III TCNNGA 2 cut(s) 176, 216
Hpy8I GTNNAC 2 cut(s) 331, 386
Hpy99I CGWCG 1 cut(s) 335
HpyAV CCTTC 3 cut(s) 97, 104, 203
HpyCH4IV ACGT 1 cut(s) 416
HpyCH4V TGCA 2 cut(s) 194, 375
HpyF3I CTNAG 2 cut(s) 20, 147
HpySE526I ACGT 1 cut(s) 416
Hsp92II CATG 4 cut(s) 306, 314, 340, 379
Kzo9I GATC 1 cut(s) 94
LpnPI CCDG 7 cut(s) 39, 177, 180, 189, 201, 245, 341
LweI GCATC 1 cut(s) 181
MaeII ACGT 1 cut(s) 416
MalI GATC 1 cut(s) 96
MboI GATC 1 cut(s) 94
MboII GAAGA 3 cut(s) 200, 212, 218
MhlI GDGCHC 1 cut(s) 155
MluCI AATT 3 cut(s) 26, 77, 351
MmeI TCCRAC 1 cut(s) 122
MnlI CCTC 1 cut(s) 291
Mph1103I ATGCAT 1 cut(s) 377
MseI TTAA 1 cut(s) 183
MslI CAYNNNNRTG 2 cut(s) 245, 370
NdeII GATC 1 cut(s) 94
NlaIII CATG 4 cut(s) 306, 314, 340, 379
NsiI ATGCAT 1 cut(s) 377
NspI RCATGY 1 cut(s) 314
PaqCI CACCTGC 1 cut(s) 185
PfeI GAWTC 2 cut(s) 172, 252
PspPI GGNCC 1 cut(s) 56
RseI CAYNNNNRTG 2 cut(s) 245, 370
SalI GTCGAC 1 cut(s) 329
SaqAI TTAA 1 cut(s) 183
Sau3AI GATC 1 cut(s) 94
Sau96I GGNCC 1 cut(s) 56
SduI GDGCHC 1 cut(s) 155
SetI ASST 4 cut(s) 89, 199, 302, 419
SfaNI GCATC 1 cut(s) 181
SmiMI CAYNNNNRTG 2 cut(s) 245, 370
Sse9I AATT 3 cut(s) 26, 77, 351
TaiI ACGT 1 cut(s) 419
TaqI TCGA 1 cut(s) 330
TaqII GACCGA 1 cut(s) 20
TasI AATT 3 cut(s) 26, 77, 351
TfiI GAWTC 2 cut(s) 172, 252
Tru1I TTAA 1 cut(s) 183
Tru9I TTAA 1 cut(s) 183
TscAI CASTG 2 cut(s) 155, 372
TspDTI ATGAA 3 cut(s) 219, 244, 353
TspRI CASTG 2 cut(s) 155, 372
XceI RCATGY 1 cut(s) 314
XmiI GTMKAC 2 cut(s) 330, 385
Zsp2I ATGCAT 1 cut(s) 377
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.