Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000285

Physical Location & Seq

Genomic Coordinates Forward (+)

21454965 .. 21457603

Gene Structure 2639 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00301070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGGCTTGCCACAAACTAGCAGCTGCTTCCTTTCAACTTCTTTCTCTTGTTAGTTTCCTTCTTTTCATAAGTCCATATTCTTCTGTTTTCCTTGAAGCCACAACAATATTTGCTAACTCCAATACTGTCGATGATAAGAGGTCCAATGTGGCTTGCATTGAGGAAGAGAGGAAGGCCCTCCTTGAATTCAAGCAAGGTCTTCAAGATCCTTTGCTTGCTCTTCATTCTTGGGTTGGCAAAGACTGCTGCAACTGGCATGGCATAGTCTGCAACAACCAAACAGTACCTGTTCCTCAGAGGAATCCAATCTCAGGTCCACTTCCAACATGGATAGGAAATCTGCCACATTTACAGGAGCTGGACCTTTCCTACAACTCAAAAATGAATGGAACTATTCCAGAAAGCATTGGACAACTTAGAGAGTTAAAGAGATTGTTTCTCGATGGTTGTTCATGGGAAGGCTCTATATCTGAAAATCATTTTCAGAACACTAGATTGGAAGTTTTTTATTTATCCAGCGAGGCATCTAACTCTTTGGTGTTTAACGTTAGTCATGACTGGATTCCTATCTTCAACCTCACAACTCTTGGTATCAGTGATTGTAAACTAATAGATACTGCTTTTCCAGTGTGGCTCAGAGGTCAAAAGTTCCTCGAGTACTTAGATCTTGAGAGAGTCGGAATTTCAGATACAATACCCAATTGGTTTTGGAGATTTTCACCATTCCTTTATCATGTGAGGTTATCTCATAACCAGTTAATAGGAAACCTTCCTAAGTCTCCGAGTTCTCCTCTTGAAGAAGTTTATTTCAATAATAACAGTTTGGTAGGTTCCCTTCCACTTTGGCCATATGTAACACATCTAAGCTTGGCAAGCAATAGATTTTCAGGGCCTATTCCTTTGAACATTGGCCACGAGATGTCAGAGTTGCAAGTCCTACGTCTTTCTAGAAATAATCTAACTGGTAGTTTTCCTCCTTCCTTGAGTAAAATGAAGTCATTGGAGATTCTTGATCTCTCAAGGAATTATTTCTCCGGAAATATTCCTAGGGATTGGACGGGTTTGCAAGATTTGATGATCATAGACTTTTCAAATAACAATCTATCCGGCGGAATCCCAAGCTGCATGTGCTCCCAACTACCATCACTGAAATGGTTGAGATTAAGCAACAACAATCTATGTGGGGATCTTCAGTTGTCCTTGCAAGATTGTGGAACACTGTTTACACTTGATCTAACAGGAAACAAATTCTCCGGCAACATACCAAAATGGGTAGGAGAAAACCTCCATTCGTTGTCCTATTTACTTCTAGGAGCCAACAAGTTCACAGGAAACATTCCTCATCGAATATGCGATCTCTCCTCTCTTCAGGTTTTAGACCTTTCCCAAAATAATATATCTGGCTCTATTCCTTCATGTCTTGGTGGTTTGAAACAAATGACAACAGGAGATGGCTTGCTTAGCAACTGGATGGAGAACATGACATTCTATGGGCCTGTTTATGATCCTATGCATATCGACTTAAATGTGAAAGGAGTAGAATATGAATATATTGCTGATATCATAGGACTCATTAAAAAGATTGACCTGTCAAGTAATAATCTATGGGGAGAAATACCAGAAGAGGTCAAAAATCTCATGGCTTTGGGTAGCTTGAACTTATCCCATAACCATTTGACAGGAAAGATACCAGAGGGTATCGGAAGCTTACATGAGTTAGAAGCACTTGACCTCTCCAGTAACCATCTTTGGGGTTTAATTCCTTCAAGCATGACCTCTCTGACTTCACTAAGCAAATTGAATTTGTCATTCAACAACTTCTCTGGGCCAATCCCATCAGCCAACCAATTCCCCACCTTCGATCCAACCTCATTTGAAGGAAACTCCGGACTTTGTGGACCTCCATTGCCAACCCAATGCAACTCAGCGTCCCATAATGATCCAGCTGAGAAGGTTAAGGAAGATGAAGAAGATAAGGAAGGTGAAGAAGATAAGGATGGAAAATTATGGTTCTATGCAAGCACCGCATTGGGGTTCATTGTAGGATTTTGGGTTGTTTTCGGAAGTTTGGTGCTAAAGAGGTCATGGAGACATGCTTACTTCCAGTTTCTTGACAATATGAAACAAGATTTGCTTCTGTTTTTGGACGTGACTCGTGTATCGAGGAGTTTAAGGGCTTGGAAGATGGTTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010232 GO:0010233 GO:0010305 GO:0014070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

731

Amino Acids

81.72

Weight (kDa)

5.42

Isoelectric Point (pI)

44.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	54 - 91	8.8e-11	Leucine rich repeat N-terminal domain
LRR_8	PF13855	108 - 150	9.5e-06	Leucine rich repeat
LRR_8	PF13855	284 - 343	1.9e-07	Leucine rich repeat
LRR_4	PF12799	309 - 344	2.7e-06	Leucine Rich repeats (2 copies)
LRR_8	PF13855	353 - 393	5.4e-06	Leucine rich repeat
LRR_14	PF23598	398 - 481	5.3e-07	Leucine-rich repeat region
LRR_8	PF13855	407 - 466	1e-05	Leucine rich repeat
LRR_8	PF13855	526 - 583	9.5e-08	Leucine rich repeat
LRR_14	PF23598	537 - 602	2.8e-06	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

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Publication-ready

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Orthologous Genes (Group: OG0000285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47885
fragaria_vesca	FvH4_3g09550 FvH4_4g32560
malus_domestica	MD01G1172200.v1.1
rosa_chinensis	RchiOBHm_Chr1g0353911 RchiOBHm_Chr1g0354141 RchiOBHm_Chr1g0354151 RchiOBHm_Chr1g0354161 RchiOBHm_Chr1g0354191 RchiOBHm_Chr1g0354201 RchiOBHm_Chr1g0354221 RchiOBHm_Chr1g0354271 RchiOBHm_Chr1g0354301 RchiOBHm_Chr1g0354321 RchiOBHm_Chr1g0354371 RchiOBHm_Chr1g0354401 RchiOBHm_Chr1g0354411 RchiOBHm_Chr1g0354451 RchiOBHm_Chr1g0354551 RchiOBHm_Chr1g0359231 RchiOBHm_Chr3g0470501 RchiOBHm_Chr4g0440611 RchiOBHm_Chr4g0440631 RchiOBHm_Chr4g0441421 RchiOBHm_Chr4g0441431 RchiOBHm_Chr5g0015191 RchiOBHm_Chr5g0022441 RchiOBHm_Chr7g0207081
rosa_laevigata	RLG00000009355 RLG00000009356 RLG00000023813 RLG00000024262 RLG00000028199 RLG00000028200 RLG00000028204 RLG00000028209 RLG00000028211 RLG00000028214 RLG00000028216 RLG00000028220 RLG00000028221 RLG00000028223 RLG00000028224 RLG00000028886 RLG00000029706 RLG00000032176
rosa_multiflora	Rmu_co8366321.1_g000001 Rmu_sc0001926.1_g000008 Rmu_sc0001926.1_g000009 Rmu_sc0002115.1_g000006 Rmu_sc0002115.1_g000007 Rmu_sc0002209.1_g000020 Rmu_sc0002737.1_g000005 Rmu_sc0002737.1_g000009 Rmu_sc0002737.1_g000015 Rmu_sc0002737.1_g000016 Rmu_sc0002737.1_g000018 Rmu_sc0002930.1_g000003 Rmu_sc0002930.1_g000005 Rmu_sc0003292.1_g000004 Rmu_sc0003360.1_g000004 Rmu_sc0003360.1_g000005 Rmu_sc0003381.1_g000013 Rmu_sc0004299.1_g000001 Rmu_sc0007159.1_g000001 Rmu_sc0007159.1_g000007 Rmu_sc0009777.1_g000002 Rmu_sc0010755.1_g000002 Rmu_sc0012353.1_g000001 Rmu_sc0012562.1_g000003 Rmu_sc0012562.1_g000004 Rmu_sc0012562.1_g000006 Rmu_sc0012562.1_g000013 Rmu_sc0012562.1_g000021 Rmu_sc0015525.1_g000001 Rmu_sc0015525.1_g000005 Rmu_sc0018378.1_g000001 Rmu_sc0022127.1_g000002 Rmu_sc0022144.1_g000002 Rmu_sc0035791.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056680 Rroxscaffold_1G00061360 Rroxscaffold_3G00236900 Rroxscaffold_4G00300940 Rroxscaffold_4G00301040 Rroxscaffold_4G00301050 Rroxscaffold_4G00301070 Rroxscaffold_4G00301100 Rroxscaffold_4G00301110 Rroxscaffold_4G00301930 Rroxscaffold_4G00301940 Rroxscaffold_4G00301950 Rroxscaffold_7G00202690
rosa_rugosa	Rorug01G0242000 Rorug01G0242100 Rorug01G0242200 Rorug01G0242300 Rorug01G0242700 Rorug01G0242900 Rorug01G0243000 Rorug03G0109600 Rorug03G0109700 Rorug04G0327000 Rorug04G0333500 Rorug04G0333600 Rorug05G0024600 RorugPtG0003000
rosa_samantha	Rh1AG253200 Rh1AG253400 Rh1BG225200 Rh1CG177100 Rh1CG234500 Rh1CG237000 Rh1DG252000 Rh1DG252400 Rh1DG252900 Rh3CG085900 Rh4BG399300 Rh4DG391900
rosa_wichuraiana	Rw1G015760 Rw1G022030 Rw1G022100 Rw1G022120 Rw1G022230 Rw5G010290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccIII	TCCGGA	2 cut(s)	1034, 1886
AciI	CCGC	2 cut(s)	1110, 2025
AclI	AACGTT	1 cut(s)	546
AclWI	GGATC	5 cut(s)	200, 1194, 1499, 1856, 1934
AcoI	YGGCCR	2 cut(s)	845, 910
AcsI	RAATTY	4 cut(s)	185, 681, 1247, 1801
AcuI	CTGAAG	2 cut(s)	1175, 1352
AfaI	GTAC	2 cut(s)	285, 659
AfiI	CCNNNNNNNGG	3 cut(s)	311, 1750, 2031
AjiI	CACGTC	1 cut(s)	2149
AjuI	GAANNNNNNNTTGG	2 cut(s)	479, 511
AluBI	AGCT	7 cut(s)	23, 358, 867, 1122, 1653, 1707, 1946
AluI	AGCT	7 cut(s)	23, 358, 867, 1122, 1653, 1707, 1946
Alw21I	GWGCWC	1 cut(s)	1133
Alw26I	GTCTC	2 cut(s)	783, 2083
AlwI	GGATC	5 cut(s)	200, 1194, 1499, 1856, 1934
AlwNI	CAGNNNCTG	2 cut(s)	287, 358
Ama87I	CYCGRG	1 cut(s)	653
Aor13HI	TCCGGA	2 cut(s)	1034, 1886
AoxI	GGCC	6 cut(s)	174, 845, 890, 910, 1493, 1826
ApeKI	GCWGC	4 cut(s)	20, 23, 246, 1122
ApoI	RAATTY	4 cut(s)	185, 681, 1247, 1801
Asp700I	GAANNNNTTC	1 cut(s)	1028
AspA2I	CCTAGG	1 cut(s)	1046
AspS9I	GGNCC	8 cut(s)	141, 175, 314, 361, 890, 1493, 1826, 1898
AsuHPI	GGTGA	2 cut(s)	711, 1994
AvaI	CYCGRG	1 cut(s)	653
AvaII	GGWCC	4 cut(s)	141, 314, 361, 1898
AvrII	CCTAGG	1 cut(s)	1046
BaeI	ACNNNNGTAYC	2 cut(s)	2142, 2175
BalI	TGGCCA	2 cut(s)	847, 912
BarI	GAAGNNNNNNTAC	2 cut(s)	819, 851
BauI	CACGAG	2 cut(s)	914, 2154
BbsI	GAAGAC	1 cut(s)	191
Bbv12I	GWGCWC	1 cut(s)	1133
BbvI	GCAGC	4 cut(s)	10, 32, 233, 1109
BccI	CCATC	8 cut(s)	437, 1150, 1445, 1465, 1752, 1843, 1991, 2179
BclI	TGATCA	1 cut(s)	1077
BcoDI	GTCTC	2 cut(s)	783, 2083
BfaI	CTAG	5 cut(s)	17, 492, 948, 1047, 1310
BglII	AGATCT	1 cut(s)	664
BisI	GCNGC	4 cut(s)	21, 24, 247, 1123
BlnI	CCTAGG	1 cut(s)	1046
BlpI	GCTNAGC	1 cut(s)	1460
BlsI	GCNGC	4 cut(s)	22, 25, 248, 1124
BmcAI	AGTACT	1 cut(s)	659
Bme18I	GGWCC	4 cut(s)	141, 314, 361, 1898
BmeT110I	CYCGRG	1 cut(s)	653
BmgBI	CACGTC	1 cut(s)	2149
BmgT120I	GGNCC	8 cut(s)	141, 175, 314, 361, 890, 1493, 1826, 1898
BmiI	GGNNCC	2 cut(s)	832, 1315
BmsI	GCATC	1 cut(s)	533
BpiI	GAAGAC	1 cut(s)	191
BplI	GAGNNNNNCTC	6 cut(s)	730, 762, 775, 807, 1269, 1301
BpmI	CTGGAG	1 cut(s)	1720
Bpu1102I	GCTNAGC	1 cut(s)	1460
BpuEI	CTTGAG	3 cut(s)	689, 1003, 1003
BsaBI	GATNNNNATC	1 cut(s)	566
BsaJI	CCNNGG	1 cut(s)	1046
BsaWI	WCCGGW	2 cut(s)	1034, 1886
BsaXI	ACNNNNNCTCC	2 cut(s)	1235, 1265
Bsc4I	CCNNNNNNNGG	3 cut(s)	311, 1750, 2031
Bse1I	ACTGG	8 cut(s)	257, 563, 626, 754, 967, 1472, 1737, 2104
Bse3DI	GCAATG	1 cut(s)	1904
Bse8I	GATNNNNATC	1 cut(s)	566
BseAI	TCCGGA	2 cut(s)	1034, 1886
BseDI	CCNNGG	1 cut(s)	1046
BseGI	GGATG	2 cut(s)	1476, 2002
BseJI	GATNNNNATC	1 cut(s)	566
BseLI	CCNNNNNNNGG	3 cut(s)	311, 1750, 2031
BseMI	GCAATG	1 cut(s)	1904
BseMII	CTCAG	5 cut(s)	308, 324, 649, 1938, 1938
BseNI	ACTGG	8 cut(s)	257, 563, 626, 754, 967, 1472, 1737, 2104
BseRI	GAGGAG	3 cut(s)	780, 1351, 2179
BseXI	GCAGC	4 cut(s)	10, 32, 233, 1109
BshFI	GGCC	6 cut(s)	176, 847, 892, 912, 1495, 1828
BsiHKAI	GWGCWC	1 cut(s)	1133
BsiHKCI	CYCGRG	1 cut(s)	653
BsiSI	CCGG	4 cut(s)	1035, 1107, 1254, 1887
BslFI	GGGAC	1 cut(s)	1915
BslI	CCNNNNNNNGG	3 cut(s)	311, 1750, 2031
BsmAI	GTCTC	2 cut(s)	783, 2083
BsmFI	GGGAC	1 cut(s)	1915
BsnI	GGCC	6 cut(s)	176, 847, 892, 912, 1495, 1828
BsoBI	CYCGRG	1 cut(s)	653
Bsp1286I	GDGCHC	1 cut(s)	1133
Bsp13I	TCCGGA	2 cut(s)	1034, 1886
Bsp1720I	GCTNAGC	1 cut(s)	1460
BspACI	CCGC	2 cut(s)	1110, 2025
BspANI	GGCC	6 cut(s)	176, 847, 892, 912, 1495, 1828
BspCNI	CTCAG	5 cut(s)	307, 323, 648, 1937, 1939
BspEI	TCCGGA	2 cut(s)	1034, 1886
BspHI	TCATGA	1 cut(s)	553
BspLI	GGNNCC	2 cut(s)	832, 1315
BspPI	GGATC	5 cut(s)	200, 1194, 1499, 1856, 1934
BspQI	GCTCTTC	1 cut(s)	225
BsrDI	GCAATG	1 cut(s)	1904
BsrI	ACTGG	8 cut(s)	257, 563, 626, 754, 967, 1472, 1737, 2104
BssECI	CCNNGG	1 cut(s)	1046
BssSI	CACGAG	2 cut(s)	914, 2154
BssT1I	CCWWGG	1 cut(s)	1046
Bst2BI	CACGAG	2 cut(s)	914, 2154
Bst4CI	ACNGT	4 cut(s)	127, 283, 821, 1221
Bst6I	CTCTTC	4 cut(s)	159, 225, 1371, 1617
BstAPI	GCANNNNNTGC	2 cut(s)	243, 267
BstC8I	GCNNGC	6 cut(s)	7, 154, 216, 874, 1457, 2020
BstF5I	GGATG	2 cut(s)	1476, 2002
BstMAI	GTCTC	2 cut(s)	783, 2083
BstMWI	GCNNNNNNNGC	6 cut(s)	243, 267, 873, 1128, 1461, 2024
BstNSI	RCATGY	2 cut(s)	1129, 2096
BstV1I	GCAGC	4 cut(s)	10, 32, 233, 1109
BstV2I	GAAGAC	1 cut(s)	191
BstX2I	RGATCY	3 cut(s)	205, 664, 1186
BstYI	RGATCY	3 cut(s)	205, 664, 1186
BsuRI	GGCC	6 cut(s)	176, 847, 892, 912, 1495, 1828
BtrI	CACGTC	1 cut(s)	2149
BtsCI	GGATG	2 cut(s)	1476, 2002
BtsIMutI	CAGTG	4 cut(s)	601, 633, 1145, 1217
Cac8I	GCNNGC	6 cut(s)	7, 154, 216, 874, 1457, 2020
CaiI	CAGNNNCTG	2 cut(s)	287, 358
CciI	TCATGA	1 cut(s)	553
Cfr13I	GGNCC	8 cut(s)	141, 175, 314, 361, 890, 1493, 1826, 1898
CseI	GACGC	1 cut(s)	1917
Csp6I	GTAC	2 cut(s)	284, 658
CspCI	CAANNNNNGTGG	2 cut(s)	1162, 1197
CviQI	GTAC	2 cut(s)	284, 658
EaeI	YGGCCR	2 cut(s)	845, 910
Eam1104I	CTCTTC	4 cut(s)	159, 225, 1371, 1617
EarI	CTCTTC	4 cut(s)	159, 225, 1371, 1617
EciI	GGCGGA	1 cut(s)	1125
Eco130I	CCWWGG	1 cut(s)	1046
Eco32I	GATATC	1 cut(s)	1561
Eco47I	GGWCC	4 cut(s)	141, 314, 361, 1898
Eco57I	CTGAAG	2 cut(s)	1175, 1352
Eco88I	CYCGRG	1 cut(s)	653
EcoO109I	RGGNCCY	2 cut(s)	175, 890
EcoRI	GAATTC	1 cut(s)	185
EcoRV	GATATC	1 cut(s)	1561
EcoT14I	CCWWGG	1 cut(s)	1046
EcoT22I	ATGCAT	1 cut(s)	1515
ErhI	CCWWGG	1 cut(s)	1046
FalI	AAGNNNNNCTT	2 cut(s)	2118, 2150
FaqI	GGGAC	1 cut(s)	1915
FauNDI	CATATG	1 cut(s)	850
FbaI	TGATCA	1 cut(s)	1077
Fnu4HI	GCNGC	4 cut(s)	21, 24, 247, 1123
FokI	GGATG	2 cut(s)	1483, 2009
Fsp4HI	GCNGC	4 cut(s)	21, 24, 247, 1123
FspBI	CTAG	5 cut(s)	17, 492, 948, 1047, 1310
GluI	GCNGC	4 cut(s)	21, 24, 247, 1123
GsuI	CTGGAG	1 cut(s)	1720
HaeIII	GGCC	6 cut(s)	176, 847, 892, 912, 1495, 1828
HapII	CCGG	4 cut(s)	1035, 1107, 1254, 1887
HgaI	GACGC	1 cut(s)	1917
HindIII	AAGCTT	2 cut(s)	865, 1705
HinfI	GANTC	7 cut(s)	301, 562, 675, 1006, 1113, 1569, 2152
HpaII	CCGG	4 cut(s)	1035, 1107, 1254, 1887
HphI	GGTGA	2 cut(s)	711, 1994
Hpy166II	GTNNAC	5 cut(s)	317, 605, 1224, 1326, 1898
Hpy8I	GTNNAC	5 cut(s)	317, 605, 1224, 1326, 1898
HpyCH4III	ACNGT	4 cut(s)	127, 283, 821, 1221
HpyCH4IV	ACGT	3 cut(s)	546, 940, 2148
HpyF10VI	GCNNNNNNNGC	6 cut(s)	243, 267, 873, 1128, 1461, 2024
HpySE526I	ACGT	3 cut(s)	546, 940, 2148
Kpn2I	TCCGGA	2 cut(s)	1034, 1886
Ksp22I	TGATCA	1 cut(s)	1077
LguI	GCTCTTC	1 cut(s)	225
LmnI	GCTCC	3 cut(s)	355, 1136, 1313
Lsp1109I	GCAGC	4 cut(s)	10, 32, 233, 1109
LweI	GCATC	1 cut(s)	533
MaeI	CTAG	5 cut(s)	17, 492, 948, 1047, 1310
MaeII	ACGT	3 cut(s)	546, 940, 2148
MaeIII	GTNAC	3 cut(s)	853, 1739, 2149
MfeI	CAATTG	1 cut(s)	700
MflI	RGATCY	3 cut(s)	205, 664, 1186
MhlI	GDGCHC	1 cut(s)	1133
MlsI	TGGCCA	2 cut(s)	847, 912
MluNI	TGGCCA	2 cut(s)	847, 912
MlyI	GAGTC	3 cut(s)	684, 1563, 2146
MmeI	TCCRAC	3 cut(s)	347, 658, 1889
Mox20I	TGGCCA	2 cut(s)	847, 912
Mph1103I	ATGCAT	1 cut(s)	1515
MroI	TCCGGA	2 cut(s)	1034, 1886
MroXI	GAANNNNTTC	1 cut(s)	1028
MscI	TGGCCA	2 cut(s)	847, 912
MseI	TTAA	9 cut(s)	425, 543, 758, 1163, 1523, 1575, 1757, 1956, 2171
MslI	CAYNNNNRTG	1 cut(s)	1150
Msp20I	TGGCCA	2 cut(s)	847, 912
MspA1I	CMGCKG	2 cut(s)	23, 1946
MspI	CCGG	4 cut(s)	1035, 1107, 1254, 1887
MunI	CAATTG	1 cut(s)	700
MwoI	GCNNNNNNNGC	6 cut(s)	243, 267, 873, 1128, 1461, 2024
NdeI	CATATG	1 cut(s)	850
NlaIV	GGNNCC	2 cut(s)	832, 1315
NmuCI	GTSAC	1 cut(s)	2149
NsiI	ATGCAT	1 cut(s)	1515
NspI	RCATGY	2 cut(s)	1129, 2096
PaeR7I	CTCGAG	1 cut(s)	653
PagI	TCATGA	1 cut(s)	553
PciSI	GCTCTTC	1 cut(s)	225
PdmI	GAANNNNTTC	1 cut(s)	1028
PfeI	GAWTC	4 cut(s)	301, 562, 1006, 1113
PkrI	GCNGC	4 cut(s)	22, 25, 248, 1124
PleI	GAGTC	3 cut(s)	683, 1563, 2146
PpsI	GAGTC	3 cut(s)	683, 1563, 2146
Psp1406I	AACGTT	1 cut(s)	546
PspN4I	GGNNCC	2 cut(s)	832, 1315
PspPI	GGNCC	8 cut(s)	141, 175, 314, 361, 890, 1493, 1826, 1898
PspXI	VCTCGAGB	1 cut(s)	653
PsrI	GAACNNNNNNTAC	2 cut(s)	1207, 1239
PstNI	CAGNNNCTG	2 cut(s)	287, 358
PsuI	RGATCY	3 cut(s)	205, 664, 1186
PvuII	CAGCTG	2 cut(s)	23, 1946
RsaI	GTAC	2 cut(s)	285, 659
RsaNI	GTAC	2 cut(s)	284, 658
RseI	CAYNNNNRTG	1 cut(s)	1150
SapI	GCTCTTC	1 cut(s)	225
SaqAI	TTAA	9 cut(s)	425, 543, 758, 1163, 1523, 1575, 1757, 1956, 2171
SatI	GCNGC	4 cut(s)	21, 24, 247, 1123
Sau96I	GGNCC	8 cut(s)	141, 175, 314, 361, 890, 1493, 1826, 1898
ScaI	AGTACT	1 cut(s)	659
SchI	GAGTC	3 cut(s)	684, 1563, 2146
SduI	GDGCHC	1 cut(s)	1133
SfaNI	GCATC	1 cut(s)	533
Sfr274I	CTCGAG	1 cut(s)	653
SinI	GGWCC	4 cut(s)	141, 314, 361, 1898
SlaI	CTCGAG	1 cut(s)	653
SmiMI	CAYNNNNRTG	1 cut(s)	1150
SmlI	CTYRAG	4 cut(s)	653, 668, 982, 1018
SmoI	CTYRAG	4 cut(s)	653, 668, 982, 1018
SsiI	CCGC	2 cut(s)	1110, 2025
SspI	AATATT	2 cut(s)	108, 1042
SspMI	CTAG	5 cut(s)	17, 492, 948, 1047, 1310
StyI	CCWWGG	1 cut(s)	1046
TaaI	ACNGT	4 cut(s)	127, 283, 821, 1221
TaiI	ACGT	3 cut(s)	549, 943, 2151
TaqI	TCGA	7 cut(s)	129, 441, 654, 1345, 1518, 1860, 2162
TatI	WGTACW	1 cut(s)	657
TfiI	GAWTC	4 cut(s)	301, 562, 1006, 1113
Tru1I	TTAA	9 cut(s)	425, 543, 758, 1163, 1523, 1575, 1757, 1956, 2171
Tru9I	TTAA	9 cut(s)	425, 543, 758, 1163, 1523, 1575, 1757, 1956, 2171
TscAI	CASTG	4 cut(s)	601, 633, 1152, 1224
TseFI	GTSAC	1 cut(s)	2149
TseI	GCWGC	4 cut(s)	20, 23, 246, 1122
Tsp45I	GTSAC	1 cut(s)	2149
TspRI	CASTG	4 cut(s)	601, 633, 1152, 1224
VpaK11BI	GGWCC	4 cut(s)	141, 314, 361, 1898
XapI	RAATTY	4 cut(s)	185, 681, 1247, 1801
XbaI	TCTAGA	1 cut(s)	947
XceI	RCATGY	2 cut(s)	1129, 2096
XcmI	CCANNNNNNNNNTGG	2 cut(s)	324, 1149
XhoI	CTCGAG	1 cut(s)	653
XmaJI	CCTAGG	1 cut(s)	1046
XmnI	GAANNNNTTC	1 cut(s)	1028
XspI	CTAG	5 cut(s)	17, 492, 948, 1047, 1310
ZrmI	AGTACT	1 cut(s)	659
Zsp2I	ATGCAT	1 cut(s)	1515

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.