RLG00000028211

Receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
20141572 .. 20145221
3650 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028211

Sequence Viewer

Length: 1155 bp
ATGAGCCCCGCATTTCCAGCATGGCTAAGAACTCAAGCATTCCTTACTACTATAAATCTCTCAAATGTTGGAATTTCGGACACAATACCTGATTGGTTTCCGAGAATTTCACCACTCCTTGAACAGGTGGATCTTTCTAAGAACCAGTTAAGGAGAAGGCTTCCTAAATCGGTAAATCCTCTTCTACAAAGGGTTTATTTGGATATCAACAGTTTGGAGGGTTCCCTCCCATTTTGGCCAAATGTAACGGATCTCACCTTGGCAAGCAATCGATTTTCAGGACCAATACCCTTGAACATTGGCAATCAGATGCCAATGTTGTCTAATCTAGATCTTTCAAGGAATAATATACAAGGTTCCATCCCTAGATGTCTTGGCAAGTTGGAAAAACTGACAAAAGTAGGTGGCCAAACCTTTGTCATTGCTATGCATATGGACTTAAATGTCAAAGGTGTAGAATATGAGTACACTTCTTATCTCGTAGAAATCATATACAAGATAGACCTATCAAGTAATAACCTATGGGGAGAAATACCAAAGGAAATAACAAATCTCACTGCCTTGGGTAGCTTGAATTTGTCACATAACCATTTGACTGGAAAGATACCAGATGATATCAGAAGTTTACATCTGTTAGAAGCTCTTGACCTCTCTAGTAACCATCTATGGGGTCCAATTCCTTCAAGCATGACCTCCATGACTTCACTAAGCAAATTGAATCTGTCACATAACAACTTTTCTGGGCCAATTCCATCAACCAACCAGTTCCTTACCTTCAACGATCCAACCTCATTTGGAGGAAACTCAGGGCTTTGTGGGCATCCATTGCCAACTGAATGCACCTCATCCTCCAACAATGATAAGGATCCGGAGTTTGAAGAAGATGAATGTGAAAAAATATGGTTGGGTGCTATCCGAATGGTATCTACCATCACATTCAGATGCTCCGCCACCATCACCACCTTTCTGAAAGCTGTTGAGCGTCAAGGTTGCCTTCGTAACACATGTGGTGGGCACTTGCTTGCAGGTTTGAGCTTGACTGCTCAGCCAGTTCGTAACAAGAACGATAAAGATCAAGAGAAAGGCCCAGAAGAACAAATTTGGATCTTCATCTTCCTCTTTAATGCTCTGGCTTTCGTTTGTGTTGGTTTGTAG

Protein Analysis

385

Amino Acids

42.62

Weight (kDa)

5.93

Isoelectric Point (pI)

40.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 165 - 222 1.1e-08 Leucine rich repeat
LRR_14 PF23598 177 - 242 6e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000285)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47885
fragaria_vesca FvH4_3g09550 FvH4_4g32560
malus_domestica MD01G1172200.v1.1
rosa_chinensis RchiOBHm_Chr1g0353911 RchiOBHm_Chr1g0354141 RchiOBHm_Chr1g0354151 RchiOBHm_Chr1g0354161 RchiOBHm_Chr1g0354191 RchiOBHm_Chr1g0354201 RchiOBHm_Chr1g0354221 RchiOBHm_Chr1g0354271 RchiOBHm_Chr1g0354301 RchiOBHm_Chr1g0354321 RchiOBHm_Chr1g0354371 RchiOBHm_Chr1g0354401 RchiOBHm_Chr1g0354411 RchiOBHm_Chr1g0354451 RchiOBHm_Chr1g0354551 RchiOBHm_Chr1g0359231 RchiOBHm_Chr3g0470501 RchiOBHm_Chr4g0440611 RchiOBHm_Chr4g0440631 RchiOBHm_Chr4g0441421 RchiOBHm_Chr4g0441431 RchiOBHm_Chr5g0015191 RchiOBHm_Chr5g0022441 RchiOBHm_Chr7g0207081
rosa_laevigata RLG00000009355 RLG00000009356 RLG00000023813 RLG00000024262 RLG00000028199 RLG00000028200 RLG00000028204 RLG00000028209 RLG00000028211 RLG00000028214 RLG00000028216 RLG00000028220 RLG00000028221 RLG00000028223 RLG00000028224 RLG00000028886 RLG00000029706 RLG00000032176
rosa_multiflora Rmu_co8366321.1_g000001 Rmu_sc0001926.1_g000008 Rmu_sc0001926.1_g000009 Rmu_sc0002115.1_g000006 Rmu_sc0002115.1_g000007 Rmu_sc0002209.1_g000020 Rmu_sc0002737.1_g000005 Rmu_sc0002737.1_g000009 Rmu_sc0002737.1_g000015 Rmu_sc0002737.1_g000016 Rmu_sc0002737.1_g000018 Rmu_sc0002930.1_g000003 Rmu_sc0002930.1_g000005 Rmu_sc0003292.1_g000004 Rmu_sc0003360.1_g000004 Rmu_sc0003360.1_g000005 Rmu_sc0003381.1_g000013 Rmu_sc0004299.1_g000001 Rmu_sc0007159.1_g000001 Rmu_sc0007159.1_g000007 Rmu_sc0009777.1_g000002 Rmu_sc0010755.1_g000002 Rmu_sc0012353.1_g000001 Rmu_sc0012562.1_g000003 Rmu_sc0012562.1_g000004 Rmu_sc0012562.1_g000006 Rmu_sc0012562.1_g000013 Rmu_sc0012562.1_g000021 Rmu_sc0015525.1_g000001 Rmu_sc0015525.1_g000005 Rmu_sc0018378.1_g000001 Rmu_sc0022127.1_g000002 Rmu_sc0022144.1_g000002 Rmu_sc0035791.1_g000001
rosa_roxburghii Rroxscaffold_1G00056680 Rroxscaffold_1G00061360 Rroxscaffold_3G00236900 Rroxscaffold_4G00300940 Rroxscaffold_4G00301040 Rroxscaffold_4G00301050 Rroxscaffold_4G00301070 Rroxscaffold_4G00301100 Rroxscaffold_4G00301110 Rroxscaffold_4G00301930 Rroxscaffold_4G00301940 Rroxscaffold_4G00301950 Rroxscaffold_7G00202690
rosa_rugosa Rorug01G0242000 Rorug01G0242100 Rorug01G0242200 Rorug01G0242300 Rorug01G0242700 Rorug01G0242900 Rorug01G0243000 Rorug03G0109600 Rorug03G0109700 Rorug04G0327000 Rorug04G0333500 Rorug04G0333600 Rorug05G0024600 RorugPtG0003000
rosa_samantha Rh1AG253200 Rh1AG253400 Rh1BG225200 Rh1CG177100 Rh1CG234500 Rh1CG237000 Rh1DG252000 Rh1DG252400 Rh1DG252900 Rh3CG085900 Rh4BG399300 Rh4DG391900
rosa_wichuraiana Rw1G015760 Rw1G022030 Rw1G022100 Rw1G022120 Rw1G022230 Rw5G010290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 443
Acc36I ACCTGC 1 cut(s) 1016
AccIII TCCGGA 1 cut(s) 868
AciI CCGC 2 cut(s) 9, 948
AclWI GGATC 6 cut(s) 138, 258, 776, 860, 873, 1112
AcoI YGGCCR 2 cut(s) 236, 406
AcsI RAATTY 4 cut(s) 72, 105, 574, 1098
AfaI GTAC 1 cut(s) 467
AfiI CCNNNNNNNGG 2 cut(s) 124, 667
AflIII ACRYGT 1 cut(s) 1004
AgsI TTSAA 8 cut(s) 122, 295, 339, 574, 684, 718, 778, 878
AluBI AGCT 4 cut(s) 570, 641, 974, 1035
AluI AGCT 4 cut(s) 570, 641, 974, 1035
AlwI GGATC 6 cut(s) 138, 258, 776, 860, 873, 1112
Aor13HI TCCGGA 1 cut(s) 868
AoxI GGCC 4 cut(s) 236, 406, 743, 1084
ApoI RAATTY 4 cut(s) 72, 105, 574, 1098
AspS9I GGNCC 4 cut(s) 281, 671, 743, 1085
AsuHPI GGTGA 3 cut(s) 102, 247, 949
AvaII GGWCC 2 cut(s) 281, 671
BaeGI GKGCMC 1 cut(s) 1017
BalI TGGCCA 2 cut(s) 238, 408
BamHI GGATCC 1 cut(s) 865
BanII GRGCYC 1 cut(s) 8
BarI GAAGNNNNNNTAC 2 cut(s) 165, 197
BccI CCATC 5 cut(s) 368, 669, 760, 938, 962
BfaI CTAG 3 cut(s) 329, 366, 654
BfuAI ACCTGC 1 cut(s) 1016
BglII AGATCT 1 cut(s) 331
BlpI GCTNAGC 1 cut(s) 1044
Bme18I GGWCC 2 cut(s) 281, 671
BmgT120I GGNCC 4 cut(s) 281, 671, 743, 1085
BmiI GGNNCC 4 cut(s) 223, 358, 672, 867
BmsI GCATC 3 cut(s) 300, 829, 932
Bpu1102I GCTNAGC 1 cut(s) 1044
BpuEI CTTGAG 1 cut(s) 18
Bsa29I ATCGAT 1 cut(s) 271
BsaBI GATNNNNATC 3 cut(s) 864, 1071, 1109
BsaJI CCNNGG 2 cut(s) 258, 561
BsaWI WCCGGW 1 cut(s) 868
Bsc4I CCNNNNNNNGG 2 cut(s) 124, 667
Bse1I ACTGG 4 cut(s) 145, 601, 763, 1049
Bse3DI GCAATG 2 cut(s) 420, 824
Bse8I GATNNNNATC 3 cut(s) 864, 1071, 1109
BseAI TCCGGA 1 cut(s) 868
BseCI ATCGAT 1 cut(s) 271
BseDI CCNNGG 2 cut(s) 258, 561
BseGI GGATG 3 cut(s) 360, 820, 845
BseJI GATNNNNATC 3 cut(s) 864, 1071, 1109
BseLI CCNNNNNNNGG 2 cut(s) 124, 667
BseMI GCAATG 2 cut(s) 420, 824
BseMII CTCAG 2 cut(s) 819, 1058
BseNI ACTGG 4 cut(s) 145, 601, 763, 1049
BseSI GKGCMC 1 cut(s) 1017
BshFI GGCC 4 cut(s) 238, 408, 745, 1086
BshVI ATCGAT 1 cut(s) 271
BsiSI CCGG 1 cut(s) 869
BslI CCNNNNNNNGG 2 cut(s) 124, 667
BsmI GAATGC 2 cut(s) 38, 842
BsnI GGCC 4 cut(s) 238, 408, 745, 1086
Bsp1286I GDGCHC 2 cut(s) 8, 1017
Bsp13I TCCGGA 1 cut(s) 868
Bsp143I GATC 7 cut(s) 130, 250, 331, 781, 865, 1072, 1104
Bsp1720I GCTNAGC 1 cut(s) 1044
BspACI CCGC 2 cut(s) 9, 948
BspANI GGCC 4 cut(s) 238, 408, 745, 1086
BspCNI CTCAG 2 cut(s) 818, 1057
BspDI ATCGAT 1 cut(s) 271
BspEI TCCGGA 1 cut(s) 868
BspLI GGNNCC 4 cut(s) 223, 358, 672, 867
BspMI ACCTGC 1 cut(s) 1016
BspPI GGATC 6 cut(s) 138, 258, 776, 860, 873, 1112
BsrDI GCAATG 2 cut(s) 420, 824
BsrI ACTGG 4 cut(s) 145, 601, 763, 1049
BssECI CCNNGG 2 cut(s) 258, 561
BssMI GATC 7 cut(s) 130, 250, 331, 781, 865, 1072, 1104
BssT1I CCWWGG 2 cut(s) 258, 561
Bst4CI ACNGT 1 cut(s) 212
Bst6I CTCTTC 1 cut(s) 186
BstAPI GCANNNNNTGC 1 cut(s) 826
BstC8I GCNNGC 2 cut(s) 265, 1023
BstDEI CTNAG 5 cut(s) 26, 138, 707, 805, 1044
BstENI CCTNNNNNAGG 1 cut(s) 122
BstF5I GGATG 3 cut(s) 360, 820, 845
BstKTI GATC 7 cut(s) 133, 253, 334, 784, 868, 1075, 1107
BstMBI GATC 7 cut(s) 130, 250, 331, 781, 865, 1072, 1104
BstMWI GCNNNNNNNGC 3 cut(s) 17, 817, 826
BstNSI RCATGY 1 cut(s) 1008
BstSLI GKGCMC 1 cut(s) 1017
BstX2I RGATCY 5 cut(s) 130, 250, 331, 865, 1104
BstXI CCANNNNNNTGG 1 cut(s) 596
BstYI RGATCY 5 cut(s) 130, 250, 331, 865, 1104
Bsu15I ATCGAT 1 cut(s) 271
BsuRI GGCC 4 cut(s) 238, 408, 745, 1086
BsuTUI ATCGAT 1 cut(s) 271
BtsCI GGATG 3 cut(s) 360, 820, 845
BtsI GCAGTG 1 cut(s) 555
BtsIMutI CAGTG 1 cut(s) 555
BveI ACCTGC 1 cut(s) 1016
Cac8I GCNNGC 2 cut(s) 265, 1023
Cfr13I GGNCC 4 cut(s) 281, 671, 743, 1085
ClaI ATCGAT 1 cut(s) 271
CseI GACGC 1 cut(s) 971
Csp6I GTAC 1 cut(s) 466
CviAII CATG 4 cut(s) 21, 688, 697, 1005
CviQI GTAC 1 cut(s) 466
DdeI CTNAG 5 cut(s) 26, 138, 707, 805, 1044
DpnI GATC 7 cut(s) 132, 252, 333, 783, 867, 1074, 1106
DpnII GATC 7 cut(s) 130, 250, 331, 781, 865, 1072, 1104
DrdI GACNNNNNNGTC 1 cut(s) 443
DseDI GACNNNNNNGTC 1 cut(s) 443
EaeI YGGCCR 2 cut(s) 236, 406
Eam1104I CTCTTC 1 cut(s) 186
EarI CTCTTC 1 cut(s) 186
EciI GGCGGA 1 cut(s) 937
Eco130I CCWWGG 2 cut(s) 258, 561
Eco24I GRGCYC 1 cut(s) 8
Eco32I GATATC 2 cut(s) 205, 616
Eco47I GGWCC 2 cut(s) 281, 671
EcoNI CCTNNNNNAGG 1 cut(s) 122
EcoRV GATATC 2 cut(s) 205, 616
EcoT14I CCWWGG 2 cut(s) 258, 561
EcoT22I ATGCAT 1 cut(s) 432
EcoT38I GRGCYC 1 cut(s) 8
ErhI CCWWGG 2 cut(s) 258, 561
FaeI CATG 4 cut(s) 24, 691, 700, 1008
FalI AAGNNNNNCTT 4 cut(s) 27, 59, 978, 1010
FatI CATG 4 cut(s) 20, 687, 696, 1004
FauI CCCGC 1 cut(s) 16
FauNDI CATATG 1 cut(s) 432
FokI GGATG 3 cut(s) 347, 807, 832
FriOI GRGCYC 1 cut(s) 8
FspBI CTAG 3 cut(s) 329, 366, 654
HaeIII GGCC 4 cut(s) 238, 408, 745, 1086
HapII CCGG 1 cut(s) 869
HgaI GACGC 1 cut(s) 971
Hin1II CATG 4 cut(s) 24, 691, 700, 1008
HinfI GANTC 1 cut(s) 718
HpaII CCGG 1 cut(s) 869
HphI GGTGA 3 cut(s) 102, 247, 949
Hpy166II GTNNAC 2 cut(s) 468, 626
Hpy188I TCNGA 7 cut(s) 79, 102, 309, 620, 917, 941, 969
Hpy188III TCNNGA 5 cut(s) 279, 329, 644, 869, 1076
Hpy8I GTNNAC 2 cut(s) 468, 626
HpyAV CCTTC 4 cut(s) 150, 690, 784, 1004
HpyCH4III ACNGT 1 cut(s) 212
HpyCH4V TGCA 3 cut(s) 430, 840, 1025
HpyF10VI GCNNNNNNNGC 3 cut(s) 17, 817, 826
HpyF3I CTNAG 5 cut(s) 26, 138, 707, 805, 1044
Hsp92II CATG 4 cut(s) 24, 691, 700, 1008
Kpn2I TCCGGA 1 cut(s) 868
Kzo9I GATC 7 cut(s) 130, 250, 331, 781, 865, 1072, 1104
LmnI GCTCC 1 cut(s) 950
LweI GCATC 3 cut(s) 300, 829, 932
MaeI CTAG 3 cut(s) 329, 366, 654
MaeIII GTNAC 6 cut(s) 244, 579, 656, 723, 998, 1055
MalI GATC 7 cut(s) 132, 252, 333, 783, 867, 1074, 1106
MboI GATC 7 cut(s) 130, 250, 331, 781, 865, 1072, 1104
MboII GAAGA 6 cut(s) 173, 890, 893, 1099, 1103, 1105
MflI RGATCY 5 cut(s) 130, 250, 331, 865, 1104
MhlI GDGCHC 2 cut(s) 8, 1017
MlsI TGGCCA 2 cut(s) 238, 408
MluCI AATT 7 cut(s) 72, 105, 574, 675, 713, 747, 1098
MluNI TGGCCA 2 cut(s) 238, 408
MmeI TCCRAC 4 cut(s) 49, 363, 809, 876
Mox20I TGGCCA 2 cut(s) 238, 408
Mph1103I ATGCAT 1 cut(s) 432
MroI TCCGGA 1 cut(s) 868
MscI TGGCCA 2 cut(s) 238, 408
MseI TTAA 3 cut(s) 149, 440, 1122
MslI CAYNNNNRTG 2 cut(s) 425, 940
Msp20I TGGCCA 2 cut(s) 238, 408
MspI CCGG 1 cut(s) 869
Mva1269I GAATGC 2 cut(s) 38, 842
MwoI GCNNNNNNNGC 3 cut(s) 17, 817, 826
NdeI CATATG 1 cut(s) 432
NdeII GATC 7 cut(s) 130, 250, 331, 781, 865, 1072, 1104
NlaIII CATG 4 cut(s) 24, 691, 700, 1008
NlaIV GGNNCC 4 cut(s) 223, 358, 672, 867
NmuCI GTSAC 2 cut(s) 579, 723
NsiI ATGCAT 1 cut(s) 432
NspI RCATGY 1 cut(s) 1008
PciI ACATGT 1 cut(s) 1004
PctI GAATGC 2 cut(s) 38, 842
PfeI GAWTC 1 cut(s) 718
PscI ACATGT 1 cut(s) 1004
PspN4I GGNNCC 4 cut(s) 223, 358, 672, 867
PspPI GGNCC 4 cut(s) 281, 671, 743, 1085
PsuI RGATCY 5 cut(s) 130, 250, 331, 865, 1104
RsaI GTAC 1 cut(s) 467
RsaNI GTAC 1 cut(s) 466
RseI CAYNNNNRTG 2 cut(s) 425, 940
SaqAI TTAA 3 cut(s) 149, 440, 1122
Sau3AI GATC 7 cut(s) 130, 250, 331, 781, 865, 1072, 1104
Sau96I GGNCC 4 cut(s) 281, 671, 743, 1085
SduI GDGCHC 2 cut(s) 8, 1017
SfaNI GCATC 3 cut(s) 300, 829, 932
SinI GGWCC 2 cut(s) 281, 671
SmiMI CAYNNNNRTG 2 cut(s) 425, 940
SmlI CTYRAG 1 cut(s) 33
SmoI CTYRAG 1 cut(s) 33
Sse9I AATT 7 cut(s) 72, 105, 574, 675, 713, 747, 1098
SsiI CCGC 2 cut(s) 9, 948
SspMI CTAG 3 cut(s) 329, 366, 654
StyI CCWWGG 2 cut(s) 258, 561
TaaI ACNGT 1 cut(s) 212
TaqI TCGA 1 cut(s) 271
TasI AATT 7 cut(s) 72, 105, 574, 675, 713, 747, 1098
TatI WGTACW 1 cut(s) 465
TfiI GAWTC 1 cut(s) 718
Tru1I TTAA 3 cut(s) 149, 440, 1122
Tru9I TTAA 3 cut(s) 149, 440, 1122
TscAI CASTG 1 cut(s) 562
TseFI GTSAC 2 cut(s) 579, 723
Tsp45I GTSAC 2 cut(s) 579, 723
TspDTI ATGAA 2 cut(s) 900, 1099
TspGWI ACGGA 1 cut(s) 263
TspRI CASTG 1 cut(s) 562
VpaK11BI GGWCC 2 cut(s) 281, 671
XagI CCTNNNNNAGG 1 cut(s) 122
XapI RAATTY 4 cut(s) 72, 105, 574, 1098
XbaI TCTAGA 1 cut(s) 328
XceI RCATGY 1 cut(s) 1008
XspI CTAG 3 cut(s) 329, 366, 654
Zsp2I ATGCAT 1 cut(s) 432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.