Rmu_sc0003292.1_g000004

Receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003292.1
Physical Location & Seq
Forward (+)
24278 .. 25846
1569 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003292.1_g000004.1.cds

Sequence Viewer

Length: 1569 bp
atggatactgcttttccagtgtggctcagaagtcaaaaattcctaaatgtcgtaagtcttgagagagtcggaatttcagatacaatacccgattggttttggagattttcaccattccttgaggatgtgaggttatctcataaccagttaagaggaaaccttcctaagtctccgagttctcctcttcaaaacgtttatttgagtaataacagtttggtaggttcccttccactttggccagatgtaacacatctaagcttggcaagcaatagattttcagggcctattcctttgaacattggccacgagatgtcagagttgcaagtcctacgtctttctagaaataatctaactggtagttttcctccttccttgagtaaaatgaagtcattggagattcttgatctctcaaggaattatttctccggaaatattcctagggattggacgggtttgcaaaatttgatgatcatagacttttcaaataacaatctatctggcggaatcccaagctgcatgtgctcccaactaccattactgaaatggttgagattaagcaacaacaatctatctggggatcttcagttgtccttgcaagattgtggaacactgtttacacttgatctaacaggaaacaaattctccggcaacataccaaaatgggtaggagaaaacctccattcgttgtcctatttacttctaggagccaacaagttcacaggaaacattcctcatcaaatatgcggcctctcctctcttcaggttttagacctttcccaaaataatatatctggctccattccttcatgtcttggtggtttgaaacaaatgataacaggagatggcttgcttagcaactggatggagaacatgacgttctatgggcctgtttatgatcctatgcatatcgacttaaatgtgaaaggagtagaatatgaatatattgctgatatcataggactcattaaaaagattgacctgtcaagtaataatctatggggagaaataccagaagaggtcaaaaatctcatggctttgggtagcttgaacttatcccataaccatttgacaggaaagataccagagggtatcggaagcatacatgagttagaagcacttgacctctccagtaaccatctttggggtttaattccttcaagcatgacctctctgacttcactaagcaaattgaatttgtcattcaacaacttctctgggtcaatcccattagccaaccaattccccaccttcgatccaacctcatttgaaggaaactctggactttgtggacctccattgccaacccaatgcagctcagcgtcccataatgatccagctgcgaaggttgaggaagatgaagaagataaggatggaaaattatggttctatgcaagcaccgcattggggttccttgtaggattttgggttgtttttggaagtttggtgctaaagaggtcatggagacatgcttacttccagtttcttgacaatatgaaacaagatttgcttctgtttttggaagtgactcgtgtatcgaggagtttaagggcttggaagatggttgattga

Protein Analysis

522

Amino Acids

57.99

Weight (kDa)

5.66

Isoelectric Point (pI)

47.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000285)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47885
fragaria_vesca FvH4_3g09550 FvH4_4g32560
malus_domestica MD01G1172200.v1.1
rosa_chinensis RchiOBHm_Chr1g0353911 RchiOBHm_Chr1g0354141 RchiOBHm_Chr1g0354151 RchiOBHm_Chr1g0354161 RchiOBHm_Chr1g0354191 RchiOBHm_Chr1g0354201 RchiOBHm_Chr1g0354221 RchiOBHm_Chr1g0354271 RchiOBHm_Chr1g0354301 RchiOBHm_Chr1g0354321 RchiOBHm_Chr1g0354371 RchiOBHm_Chr1g0354401 RchiOBHm_Chr1g0354411 RchiOBHm_Chr1g0354451 RchiOBHm_Chr1g0354551 RchiOBHm_Chr1g0359231 RchiOBHm_Chr3g0470501 RchiOBHm_Chr4g0440611 RchiOBHm_Chr4g0440631 RchiOBHm_Chr4g0441421 RchiOBHm_Chr4g0441431 RchiOBHm_Chr5g0015191 RchiOBHm_Chr5g0022441 RchiOBHm_Chr7g0207081
rosa_laevigata RLG00000009355 RLG00000009356 RLG00000023813 RLG00000024262 RLG00000028199 RLG00000028200 RLG00000028204 RLG00000028209 RLG00000028211 RLG00000028214 RLG00000028216 RLG00000028220 RLG00000028221 RLG00000028223 RLG00000028224 RLG00000028886 RLG00000029706 RLG00000032176
rosa_multiflora Rmu_co8366321.1_g000001 Rmu_sc0001926.1_g000008 Rmu_sc0001926.1_g000009 Rmu_sc0002115.1_g000006 Rmu_sc0002115.1_g000007 Rmu_sc0002209.1_g000020 Rmu_sc0002737.1_g000005 Rmu_sc0002737.1_g000009 Rmu_sc0002737.1_g000015 Rmu_sc0002737.1_g000016 Rmu_sc0002737.1_g000018 Rmu_sc0002930.1_g000003 Rmu_sc0002930.1_g000005 Rmu_sc0003292.1_g000004 Rmu_sc0003360.1_g000004 Rmu_sc0003360.1_g000005 Rmu_sc0003381.1_g000013 Rmu_sc0004299.1_g000001 Rmu_sc0007159.1_g000001 Rmu_sc0007159.1_g000007 Rmu_sc0009777.1_g000002 Rmu_sc0010755.1_g000002 Rmu_sc0012353.1_g000001 Rmu_sc0012562.1_g000003 Rmu_sc0012562.1_g000004 Rmu_sc0012562.1_g000006 Rmu_sc0012562.1_g000013 Rmu_sc0012562.1_g000021 Rmu_sc0015525.1_g000001 Rmu_sc0015525.1_g000005 Rmu_sc0018378.1_g000001 Rmu_sc0022127.1_g000002 Rmu_sc0022144.1_g000002 Rmu_sc0035791.1_g000001
rosa_roxburghii Rroxscaffold_1G00056680 Rroxscaffold_1G00061360 Rroxscaffold_3G00236900 Rroxscaffold_4G00300940 Rroxscaffold_4G00301040 Rroxscaffold_4G00301050 Rroxscaffold_4G00301070 Rroxscaffold_4G00301100 Rroxscaffold_4G00301110 Rroxscaffold_4G00301930 Rroxscaffold_4G00301940 Rroxscaffold_4G00301950 Rroxscaffold_7G00202690
rosa_rugosa Rorug01G0242000 Rorug01G0242100 Rorug01G0242200 Rorug01G0242300 Rorug01G0242700 Rorug01G0242900 Rorug01G0243000 Rorug03G0109600 Rorug03G0109700 Rorug04G0327000 Rorug04G0333500 Rorug04G0333600 Rorug05G0024600 RorugPtG0003000
rosa_samantha Rh1AG253200 Rh1AG253400 Rh1BG225200 Rh1CG177100 Rh1CG234500 Rh1CG237000 Rh1DG252000 Rh1DG252400 Rh1DG252900 Rh3CG085900 Rh4BG399300 Rh4DG391900
rosa_wichuraiana Rw1G015760 Rw1G022030 Rw1G022100 Rw1G022120 Rw1G022230 Rw5G010290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 425
AciI CCGC 3 cut(s) 501, 744, 1398
AclI AACGTT 1 cut(s) 192
AclWI GGATC 4 cut(s) 585, 890, 1247, 1325
AcoI YGGCCR 2 cut(s) 236, 301
AcsI RAATTY 5 cut(s) 38, 72, 460, 638, 1192
AcuI CTGAAG 2 cut(s) 566, 743
AfiI CCNNNNNNNGG 2 cut(s) 1141, 1404
AgsI TTSAA 9 cut(s) 188, 295, 483, 823, 1048, 1158, 1192, 1204, 1268
AluBI AGCT 5 cut(s) 258, 513, 1044, 1314, 1337
AluI AGCT 5 cut(s) 258, 513, 1044, 1314, 1337
Alw21I GWGCWC 1 cut(s) 524
Alw26I GTCTC 2 cut(s) 174, 1456
AlwI GGATC 4 cut(s) 585, 890, 1247, 1325
Aor13HI TCCGGA 1 cut(s) 425
AoxI GGCC 5 cut(s) 236, 281, 301, 745, 884
ApeKI GCWGC 3 cut(s) 513, 1311, 1337
ApoI RAATTY 5 cut(s) 38, 72, 460, 638, 1192
Asp700I GAANNNNTTC 1 cut(s) 419
AspA2I CCTAGG 1 cut(s) 437
AspS9I GGNCC 3 cut(s) 281, 884, 1289
AsuHPI GGTGA 1 cut(s) 102
AvaII GGWCC 1 cut(s) 1289
AvrII CCTAGG 1 cut(s) 437
BaeI ACNNNNGTAYC 2 cut(s) 1515, 1548
BalI TGGCCA 2 cut(s) 238, 303
BarI GAAGNNNNNNTAC 2 cut(s) 210, 242
BauI CACGAG 2 cut(s) 305, 1527
Bbv12I GWGCWC 1 cut(s) 524
BbvI GCAGC 3 cut(s) 500, 1323, 1324
BccI CCATC 5 cut(s) 836, 856, 1143, 1364, 1552
BclI TGATCA 1 cut(s) 468
BcoDI GTCTC 2 cut(s) 174, 1456
BfaI CTAG 3 cut(s) 339, 438, 701
BisI GCNGC 4 cut(s) 514, 745, 1312, 1338
BlnI CCTAGG 1 cut(s) 437
BlpI GCTNAGC 2 cut(s) 851, 1315
BlsI GCNGC 4 cut(s) 515, 746, 1313, 1339
Bme18I GGWCC 1 cut(s) 1289
BmgT120I GGNCC 3 cut(s) 281, 884, 1289
BmiI GGNNCC 4 cut(s) 223, 706, 796, 1409
BplI GAGNNNNNCTC 6 cut(s) 121, 153, 166, 198, 660, 692
BpmI CTGGAG 1 cut(s) 1111
Bpu1102I GCTNAGC 2 cut(s) 851, 1315
BpuEI CTTGAG 4 cut(s) 80, 140, 394, 394
BsaJI CCNNGG 1 cut(s) 437
BsaWI WCCGGW 1 cut(s) 425
BsaXI ACNNNNNCTCC 2 cut(s) 626, 656
Bsc4I CCNNNNNNNGG 2 cut(s) 1141, 1404
Bse1I ACTGG 6 cut(s) 17, 145, 358, 863, 1128, 1477
Bse3DI GCAATG 1 cut(s) 1295
BseAI TCCGGA 1 cut(s) 425
BseDI CCNNGG 1 cut(s) 437
BseGI GGATG 3 cut(s) 130, 867, 1375
BseLI CCNNNNNNNGG 2 cut(s) 1141, 1404
BseMI GCAATG 1 cut(s) 1295
BseMII CTCAG 2 cut(s) 40, 1329
BseNI ACTGG 6 cut(s) 17, 145, 358, 863, 1128, 1477
BseRI GAGGAG 3 cut(s) 171, 742, 1552
BseXI GCAGC 3 cut(s) 500, 1323, 1324
BshFI GGCC 5 cut(s) 238, 283, 303, 747, 886
BsiHKAI GWGCWC 1 cut(s) 524
BsiSI CCGG 2 cut(s) 426, 645
BslFI GGGAC 1 cut(s) 1306
BslI CCNNNNNNNGG 2 cut(s) 1141, 1404
BsmAI GTCTC 2 cut(s) 174, 1456
BsmFI GGGAC 1 cut(s) 1306
BsnI GGCC 5 cut(s) 238, 283, 303, 747, 886
Bsp1286I GDGCHC 1 cut(s) 524
Bsp13I TCCGGA 1 cut(s) 425
Bsp143I GATC 7 cut(s) 403, 468, 577, 622, 895, 1252, 1330
Bsp1720I GCTNAGC 2 cut(s) 851, 1315
BspACI CCGC 3 cut(s) 501, 744, 1398
BspANI GGCC 5 cut(s) 238, 283, 303, 747, 886
BspCNI CTCAG 2 cut(s) 39, 1328
BspEI TCCGGA 1 cut(s) 425
BspLI GGNNCC 4 cut(s) 223, 706, 796, 1409
BspPI GGATC 4 cut(s) 585, 890, 1247, 1325
BsrDI GCAATG 1 cut(s) 1295
BsrI ACTGG 6 cut(s) 17, 145, 358, 863, 1128, 1477
BssECI CCNNGG 1 cut(s) 437
BssMI GATC 7 cut(s) 403, 468, 577, 622, 895, 1252, 1330
BssSI CACGAG 2 cut(s) 305, 1527
BssT1I CCWWGG 1 cut(s) 437
Bst2BI CACGAG 2 cut(s) 305, 1527
Bst4CI ACNGT 2 cut(s) 212, 612
Bst6I CTCTTC 3 cut(s) 189, 762, 1008
BstC8I GCNNGC 3 cut(s) 265, 848, 1393
BstDEI CTNAG 6 cut(s) 26, 165, 254, 851, 1181, 1315
BstF5I GGATG 3 cut(s) 130, 867, 1375
BstKTI GATC 7 cut(s) 406, 471, 580, 625, 898, 1255, 1333
BstMAI GTCTC 2 cut(s) 174, 1456
BstMBI GATC 7 cut(s) 403, 468, 577, 622, 895, 1252, 1330
BstMWI GCNNNNNNNGC 4 cut(s) 264, 519, 852, 1397
BstNSI RCATGY 2 cut(s) 520, 1469
BstV1I GCAGC 3 cut(s) 500, 1323, 1324
BstX2I RGATCY 1 cut(s) 577
BstYI RGATCY 1 cut(s) 577
BsuRI GGCC 5 cut(s) 238, 283, 303, 747, 886
BtsCI GGATG 3 cut(s) 130, 867, 1375
BtsIMutI CAGTG 2 cut(s) 24, 608
Cac8I GCNNGC 3 cut(s) 265, 848, 1393
Cfr13I GGNCC 3 cut(s) 281, 884, 1289
CseI GACGC 1 cut(s) 1308
CviAII CATG 8 cut(s) 517, 807, 871, 1030, 1103, 1162, 1458, 1466
DdeI CTNAG 6 cut(s) 26, 165, 254, 851, 1181, 1315
DpnI GATC 7 cut(s) 405, 470, 579, 624, 897, 1254, 1332
DpnII GATC 7 cut(s) 403, 468, 577, 622, 895, 1252, 1330
EaeI YGGCCR 2 cut(s) 236, 301
Eam1104I CTCTTC 3 cut(s) 189, 762, 1008
EarI CTCTTC 3 cut(s) 189, 762, 1008
EciI GGCGGA 1 cut(s) 516
Eco130I CCWWGG 1 cut(s) 437
Eco32I GATATC 1 cut(s) 952
Eco47I GGWCC 1 cut(s) 1289
Eco57I CTGAAG 2 cut(s) 566, 743
EcoO109I RGGNCCY 1 cut(s) 281
EcoRV GATATC 1 cut(s) 952
EcoT14I CCWWGG 1 cut(s) 437
EcoT22I ATGCAT 1 cut(s) 906
ErhI CCWWGG 1 cut(s) 437
FaeI CATG 8 cut(s) 520, 810, 874, 1033, 1106, 1165, 1461, 1469
FalI AAGNNNNNCTT 2 cut(s) 1491, 1523
FaqI GGGAC 1 cut(s) 1306
FatI CATG 8 cut(s) 516, 806, 870, 1029, 1102, 1161, 1457, 1465
FbaI TGATCA 1 cut(s) 468
Fnu4HI GCNGC 4 cut(s) 514, 745, 1312, 1338
FokI GGATG 3 cut(s) 137, 874, 1382
Fsp4HI GCNGC 4 cut(s) 514, 745, 1312, 1338
FspBI CTAG 3 cut(s) 339, 438, 701
GluI GCNGC 4 cut(s) 514, 745, 1312, 1338
GsuI CTGGAG 1 cut(s) 1111
HaeIII GGCC 5 cut(s) 238, 283, 303, 747, 886
HapII CCGG 2 cut(s) 426, 645
HgaI GACGC 1 cut(s) 1308
Hin1II CATG 8 cut(s) 520, 810, 874, 1033, 1106, 1165, 1461, 1469
HindIII AAGCTT 1 cut(s) 256
HinfI GANTC 5 cut(s) 66, 397, 504, 960, 1525
HpaII CCGG 2 cut(s) 426, 645
HphI GGTGA 1 cut(s) 102
Hpy166II GTNNAC 3 cut(s) 615, 717, 1289
Hpy188I TCNGA 7 cut(s) 29, 71, 79, 174, 316, 1094, 1173
Hpy188III TCNNGA 6 cut(s) 59, 339, 401, 426, 1278, 1484
Hpy8I GTNNAC 3 cut(s) 615, 717, 1289
HpyAV CCTTC 8 cut(s) 170, 236, 378, 813, 1164, 1258, 1262, 1336
HpyCH4III ACNGT 2 cut(s) 212, 612
HpyCH4IV ACGT 3 cut(s) 192, 331, 875
HpyCH4V TGCA 7 cut(s) 322, 457, 516, 595, 904, 1311, 1391
HpyF10VI GCNNNNNNNGC 4 cut(s) 264, 519, 852, 1397
HpyF3I CTNAG 6 cut(s) 26, 165, 254, 851, 1181, 1315
HpySE526I ACGT 3 cut(s) 192, 331, 875
Hsp92II CATG 8 cut(s) 520, 810, 874, 1033, 1106, 1165, 1461, 1469
Kpn2I TCCGGA 1 cut(s) 425
Ksp22I TGATCA 1 cut(s) 468
Kzo9I GATC 7 cut(s) 403, 468, 577, 622, 895, 1252, 1330
LmnI GCTCC 3 cut(s) 527, 704, 800
Lsp1109I GCAGC 3 cut(s) 500, 1323, 1324
MaeI CTAG 3 cut(s) 339, 438, 701
MaeII ACGT 3 cut(s) 192, 331, 875
MaeIII GTNAC 3 cut(s) 244, 1130, 1522
MalI GATC 7 cut(s) 405, 470, 579, 624, 897, 1254, 1332
MboI GATC 7 cut(s) 403, 468, 577, 622, 895, 1252, 1330
MboII GAAGA 8 cut(s) 176, 572, 749, 1025, 1364, 1370, 1373, 1567
MflI RGATCY 1 cut(s) 577
MhlI GDGCHC 1 cut(s) 524
MlsI TGGCCA 2 cut(s) 238, 303
MluNI TGGCCA 2 cut(s) 238, 303
MlyI GAGTC 3 cut(s) 75, 954, 1519
MmeI TCCRAC 2 cut(s) 49, 1280
Mox20I TGGCCA 2 cut(s) 238, 303
Mph1103I ATGCAT 1 cut(s) 906
MroI TCCGGA 1 cut(s) 425
MroXI GAANNNNTTC 1 cut(s) 419
MscI TGGCCA 2 cut(s) 238, 303
MseI TTAA 6 cut(s) 149, 554, 914, 966, 1148, 1544
Msp20I TGGCCA 2 cut(s) 238, 303
MspA1I CMGCKG 1 cut(s) 1337
MspI CCGG 2 cut(s) 426, 645
MwoI GCNNNNNNNGC 4 cut(s) 264, 519, 852, 1397
NdeII GATC 7 cut(s) 403, 468, 577, 622, 895, 1252, 1330
NlaIII CATG 8 cut(s) 520, 810, 874, 1033, 1106, 1165, 1461, 1469
NlaIV GGNNCC 4 cut(s) 223, 706, 796, 1409
NmuCI GTSAC 1 cut(s) 1522
NsiI ATGCAT 1 cut(s) 906
NspI RCATGY 2 cut(s) 520, 1469
PdmI GAANNNNTTC 1 cut(s) 419
PfeI GAWTC 2 cut(s) 397, 504
PkrI GCNGC 4 cut(s) 515, 746, 1313, 1339
PleI GAGTC 3 cut(s) 74, 954, 1519
PpsI GAGTC 3 cut(s) 74, 954, 1519
Psp1406I AACGTT 1 cut(s) 192
PspN4I GGNNCC 4 cut(s) 223, 706, 796, 1409
PspPI GGNCC 3 cut(s) 281, 884, 1289
PsrI GAACNNNNNNTAC 2 cut(s) 598, 630
PsuI RGATCY 1 cut(s) 577
PvuII CAGCTG 1 cut(s) 1337
SaqAI TTAA 6 cut(s) 149, 554, 914, 966, 1148, 1544
SatI GCNGC 4 cut(s) 514, 745, 1312, 1338
Sau3AI GATC 7 cut(s) 403, 468, 577, 622, 895, 1252, 1330
Sau96I GGNCC 3 cut(s) 281, 884, 1289
SchI GAGTC 3 cut(s) 75, 954, 1519
SduI GDGCHC 1 cut(s) 524
SinI GGWCC 1 cut(s) 1289
SmlI CTYRAG 4 cut(s) 59, 119, 373, 409
SmoI CTYRAG 4 cut(s) 59, 119, 373, 409
SsiI CCGC 3 cut(s) 501, 744, 1398
SspI AATATT 1 cut(s) 433
SspMI CTAG 3 cut(s) 339, 438, 701
StyI CCWWGG 1 cut(s) 437
TaaI ACNGT 2 cut(s) 212, 612
TaiI ACGT 3 cut(s) 195, 334, 878
TaqI TCGA 3 cut(s) 909, 1251, 1535
TauI GCSGC 1 cut(s) 747
TfiI GAWTC 2 cut(s) 397, 504
Tru1I TTAA 6 cut(s) 149, 554, 914, 966, 1148, 1544
Tru9I TTAA 6 cut(s) 149, 554, 914, 966, 1148, 1544
TscAI CASTG 2 cut(s) 24, 615
TseFI GTSAC 1 cut(s) 1522
TseI GCWGC 3 cut(s) 513, 1311, 1337
Tsp45I GTSAC 1 cut(s) 1522
TspDTI ATGAA 5 cut(s) 398, 795, 951, 1371, 1508
TspRI CASTG 2 cut(s) 24, 615
VpaK11BI GGWCC 1 cut(s) 1289
XapI RAATTY 5 cut(s) 38, 72, 460, 638, 1192
XbaI TCTAGA 1 cut(s) 338
XceI RCATGY 2 cut(s) 520, 1469
XcmI CCANNNNNNNNNTGG 1 cut(s) 540
XmaJI CCTAGG 1 cut(s) 437
XmnI GAANNNNTTC 1 cut(s) 419
XspI CTAG 3 cut(s) 339, 438, 701
Zsp2I ATGCAT 1 cut(s) 906
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.