Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003381.1

Orthogroup ID

OG0000285

Physical Location & Seq

Genomic Coordinates Reverse (-)

44457 .. 47340

Gene Structure 2884 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003381.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

atggctatcagcaaagtttcctttcaacttctttcactcgttttcctgcttttcttcaccaaaccttttgtccttgaagccacattgatcaactcccatgttgtgaattttactgcggcttgtattgaggaggagaagaaggccctccttaaattcaaactaggcctcaaagatcctgcaggtatactttcctcttgggttggggaagactgttgcaagtggatgggcattaactacagtaaccaaataggcaatgtcattaagctttcccctagcaatatctacagtacgcggacattcttaagcggtgagttagatgattctttgctcaacttaacatacttgaattacttggatctcagttataattttttcaatggaattcccatcccgagttttatagggtcactcaagaagttaaggtaccttgacctctctcactcatcttttgggggaatggttcatcatcatcttggtaatctatcaaacttactctaccttgacctcacaacaaaatcatatccattgaggccacgagattcagatttcaattggcttggtggtctctcttccttgcaatacctcagtttggggggcttgaaccttagcaaggcagcaaaaaactggttacttggtgataatatgcttccttcattgttggagttgcacttagacatcagtgaacttgatgacctccctctatttcttccatatgtgaactttacgtcacttttagtcttcgacctctcatacaacaacttcaactcttcattacctcaatggctattcaacattagtacccttgtgacaattaatcttgctaattgtcaacttgctggctccattaggaaaacttcatggaatgtatggcttttagatctttccacaaatcaattaacagggaagcttcctcaatcaatccaattaagttctgagcttggagtaactgttaatttggactccaactgtttggagggctcaattccgctttggcgaaatgccacatccctttatttgggaaacaacagattttctggacaaattcccttgaacattggccaagagatgacagcgttgaagaccctggatctatctaggaactatctaaatggttctattccaccttccattagtaggattaagaatttgactgttcttgttctatccagaaatgatttatctggaaacatcccctggctatggaagggtttgcaaaaactgaatgtcattgatatgtccgaaaacaagctgcaaggtaattttccaagcttaatgtgctcacaactacctaggcttttttggttgaaattaagccaaaacaatctttctggggagctcagtccatccttacgagattgtgcaacactatttacgcttgatctcggagggaaccaaatgtctggaacaatacctgaatgggttctatccctaaatcttggcaatcttgaagtcatgaaagatgtggatatcatgtttaagttaccatcctccttctcgcaaccaccaccgagtgtatatttggaattaattgtgaagggaagactatattctgatctagtaggtctgctgaggatcatagacctttcaagcaataatctatcaggagaaataccagaagagataacaaacctgtcaaccttatttgccttgaatttatcccaaaaccaactcataggaagaataccagagagtactggaagcttgagccgcgtagaatctcttgacctctcgagtaaccatctttgtggtccaattcctctgagcatgacttctatgactgcattgagcagattgaacttatcatacaacaacttgtcggggcctattccatcagtgaaccaattccaaaccttaaatgacctaagcatatttgaagcaaacttgggactttgtgggaatccattaccaatacaatgctcagctttcgacgatggtgatgcacaagctaaagagaacacagttgaagatgaagatggctatgaaaatctatggttctatacaagcacagcatttggattcattgtgggattttgggttgtttttggcagtttggtgattaagaggtcctggagacatgcctatttccagtatcttgacaaaatgaaaaataggtgtgcaatggtattcaatttggacatggcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010232 GO:0010233 GO:0010305 GO:0014070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

714

Amino Acids

79.55

Weight (kDa)

5.35

Isoelectric Point (pI)

33.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47885
fragaria_vesca	FvH4_3g09550 FvH4_4g32560
malus_domestica	MD01G1172200.v1.1
rosa_chinensis	RchiOBHm_Chr1g0353911 RchiOBHm_Chr1g0354141 RchiOBHm_Chr1g0354151 RchiOBHm_Chr1g0354161 RchiOBHm_Chr1g0354191 RchiOBHm_Chr1g0354201 RchiOBHm_Chr1g0354221 RchiOBHm_Chr1g0354271 RchiOBHm_Chr1g0354301 RchiOBHm_Chr1g0354321 RchiOBHm_Chr1g0354371 RchiOBHm_Chr1g0354401 RchiOBHm_Chr1g0354411 RchiOBHm_Chr1g0354451 RchiOBHm_Chr1g0354551 RchiOBHm_Chr1g0359231 RchiOBHm_Chr3g0470501 RchiOBHm_Chr4g0440611 RchiOBHm_Chr4g0440631 RchiOBHm_Chr4g0441421 RchiOBHm_Chr4g0441431 RchiOBHm_Chr5g0015191 RchiOBHm_Chr5g0022441 RchiOBHm_Chr7g0207081
rosa_laevigata	RLG00000009355 RLG00000009356 RLG00000023813 RLG00000024262 RLG00000028199 RLG00000028200 RLG00000028204 RLG00000028209 RLG00000028211 RLG00000028214 RLG00000028216 RLG00000028220 RLG00000028221 RLG00000028223 RLG00000028224 RLG00000028886 RLG00000029706 RLG00000032176
rosa_multiflora	Rmu_co8366321.1_g000001 Rmu_sc0001926.1_g000008 Rmu_sc0001926.1_g000009 Rmu_sc0002115.1_g000006 Rmu_sc0002115.1_g000007 Rmu_sc0002209.1_g000020 Rmu_sc0002737.1_g000005 Rmu_sc0002737.1_g000009 Rmu_sc0002737.1_g000015 Rmu_sc0002737.1_g000016 Rmu_sc0002737.1_g000018 Rmu_sc0002930.1_g000003 Rmu_sc0002930.1_g000005 Rmu_sc0003292.1_g000004 Rmu_sc0003360.1_g000004 Rmu_sc0003360.1_g000005 Rmu_sc0003381.1_g000013 Rmu_sc0004299.1_g000001 Rmu_sc0007159.1_g000001 Rmu_sc0007159.1_g000007 Rmu_sc0009777.1_g000002 Rmu_sc0010755.1_g000002 Rmu_sc0012353.1_g000001 Rmu_sc0012562.1_g000003 Rmu_sc0012562.1_g000004 Rmu_sc0012562.1_g000006 Rmu_sc0012562.1_g000013 Rmu_sc0012562.1_g000021 Rmu_sc0015525.1_g000001 Rmu_sc0015525.1_g000005 Rmu_sc0018378.1_g000001 Rmu_sc0022127.1_g000002 Rmu_sc0022144.1_g000002 Rmu_sc0035791.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056680 Rroxscaffold_1G00061360 Rroxscaffold_3G00236900 Rroxscaffold_4G00300940 Rroxscaffold_4G00301040 Rroxscaffold_4G00301050 Rroxscaffold_4G00301070 Rroxscaffold_4G00301100 Rroxscaffold_4G00301110 Rroxscaffold_4G00301930 Rroxscaffold_4G00301940 Rroxscaffold_4G00301950 Rroxscaffold_7G00202690
rosa_rugosa	Rorug01G0242000 Rorug01G0242100 Rorug01G0242200 Rorug01G0242300 Rorug01G0242700 Rorug01G0242900 Rorug01G0243000 Rorug03G0109600 Rorug03G0109700 Rorug04G0327000 Rorug04G0333500 Rorug04G0333600 Rorug05G0024600 RorugPtG0003000
rosa_samantha	Rh1AG253200 Rh1AG253400 Rh1BG225200 Rh1CG177100 Rh1CG234500 Rh1CG237000 Rh1DG252000 Rh1DG252400 Rh1DG252900 Rh3CG085900 Rh4BG399300 Rh4DG391900
rosa_wichuraiana	Rw1G015760 Rw1G022030 Rw1G022100 Rw1G022120 Rw1G022230 Rw5G010290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	366
Acc36I	ACCTGC	1 cut(s)	170
Acc65I	GGTACC	1 cut(s)	423
AccB1I	GGYRCC	1 cut(s)	423
AccI	GTMKAC	1 cut(s)	184
AccII	CGCG	2 cut(s)	292, 1710
AciI	CCGC	5 cut(s)	116, 292, 306, 986, 1708
AclWI	GGATC	4 cut(s)	167, 363, 1095, 1580
AcoI	YGGCCR	1 cut(s)	1057
AcsI	RAATTY	6 cut(s)	106, 152, 381, 1041, 1144, 1651
AdeI	CACNNNGTG	1 cut(s)	1511
AfaI	GTAC	4 cut(s)	289, 425, 799, 1693
AfiI	CCNNNNNNNGG	5 cut(s)	589, 610, 1015, 1134, 1200
AflII	CTTAAG	1 cut(s)	301
AjnI	CCWGG	3 cut(s)	1083, 1193, 2066
AluBI	AGCT	9 cut(s)	265, 907, 937, 1249, 1269, 1336, 1701, 1922, 1946
AluI	AGCT	9 cut(s)	265, 907, 937, 1249, 1269, 1336, 1701, 1922, 1946
Alw21I	GWGCWC	2 cut(s)	1280, 1338
Alw26I	GTCTC	2 cut(s)	569, 2065
AlwI	GGATC	4 cut(s)	167, 363, 1095, 1580
Ama87I	CYCGRG	2 cut(s)	391, 1729
AoxI	GGCC	5 cut(s)	141, 163, 530, 1057, 1820
ApeKI	GCWGC	2 cut(s)	614, 1249
ApoI	RAATTY	6 cut(s)	106, 152, 381, 1041, 1144, 1651
ArsI	GACNNNNNNTTYG	2 cut(s)	54, 86
AseI	ATTAAT	2 cut(s)	813, 1526
Asp700I	GAANNNNTTC	2 cut(s)	1419, 1841
Asp718I	GGTACC	1 cut(s)	423
AspA2I	CCTAGG	1 cut(s)	1289
AspS9I	GGNCC	4 cut(s)	142, 1748, 1820, 2064
AsuHPI	GGTGA	5 cut(s)	49, 320, 647, 1946, 2065
AvaI	CYCGRG	2 cut(s)	391, 1729
AvaII	GGWCC	2 cut(s)	1748, 2064
AvrII	CCTAGG	1 cut(s)	1289
BaeI	ACNNNNGTAYC	2 cut(s)	781, 814
BalI	TGGCCA	1 cut(s)	1059
BanI	GGYRCC	1 cut(s)	423
BanII	GRGCYC	2 cut(s)	980, 1338
BarI	GAAGNNNNNNTAC	2 cut(s)	407, 439
BauI	CACGAG	1 cut(s)	534
BbsI	GAAGAC	4 cut(s)	213, 730, 1085, 1546
Bbv12I	GWGCWC	2 cut(s)	1280, 1338
BbvCI	CCTCAGC	1 cut(s)	1568
BbvI	GCAGC	2 cut(s)	626, 1236
BccI	CCATC	8 cut(s)	217, 395, 1351, 1492, 1746, 1837, 1925, 1967
BcgI	CGANNNNNNTGC	2 cut(s)	1919, 1953
BciT130I	CCWGG	3 cut(s)	1085, 1195, 2068
BclI	TGATCA	1 cut(s)	87
BcoDI	GTCTC	2 cut(s)	569, 2065
BfaI	CTAG	5 cut(s)	161, 273, 1095, 1290, 1556
BfmI	CTRYAG	3 cut(s)	177, 235, 283
BfrI	CTTAAG	1 cut(s)	301
BfuAI	ACCTGC	1 cut(s)	170
BglII	AGATCT	1 cut(s)	877
BisI	GCNGC	4 cut(s)	117, 615, 1250, 1708
BlnI	CCTAGG	1 cut(s)	1289
BlpI	GCTNAGC	1 cut(s)	1918
BlsI	GCNGC	4 cut(s)	118, 616, 1251, 1709
BmcAI	AGTACT	1 cut(s)	1693
Bme1390I	CCNGG	3 cut(s)	1085, 1195, 2068
Bme18I	GGWCC	2 cut(s)	1748, 2064
BmeT110I	CYCGRG	2 cut(s)	391, 1729
BmgT120I	GGNCC	4 cut(s)	142, 1748, 1820, 2064
BmiI	GGNNCC	4 cut(s)	425, 841, 1391, 1821
BmrFI	CCNGG	3 cut(s)	1085, 1195, 2068
BmsI	GCATC	1 cut(s)	1927
BpiI	GAAGAC	4 cut(s)	213, 730, 1085, 1546
BpmI	CTGGAG	1 cut(s)	2089
Bpu10I	CCTNAGC	3 cut(s)	605, 1568, 1862
Bpu1102I	GCTNAGC	1 cut(s)	1918
BpuEI	CTTGAG	2 cut(s)	395, 1723
BsaI	GGTCTC	1 cut(s)	569
BsaJI	CCNNGG	3 cut(s)	1083, 1193, 1289
BsaXI	ACNNNNNCTCC	2 cut(s)	933, 963
Bsc4I	CCNNNNNNNGG	5 cut(s)	589, 610, 1015, 1134, 1200
Bse1I	ACTGG	3 cut(s)	629, 1699, 2086
Bse3DI	GCAATG	2 cut(s)	259, 2124
BseBI	CCWGG	3 cut(s)	1085, 1195, 2068
BseDI	CCNNGG	3 cut(s)	1083, 1193, 1289
BseGI	GGATG	6 cut(s)	228, 387, 1004, 1188, 1343, 1484
BseLI	CCNNNNNNNGG	5 cut(s)	589, 610, 1015, 1134, 1200
BseMI	GCAATG	2 cut(s)	259, 2124
BseMII	CTCAG	7 cut(s)	373, 598, 924, 1351, 1559, 1751, 1932
BseNI	ACTGG	3 cut(s)	629, 1699, 2086
BseRI	GAGGAG	2 cut(s)	143, 146
BseXI	GCAGC	2 cut(s)	626, 1236
Bsh1236I	CGCG	2 cut(s)	292, 1710
BshFI	GGCC	5 cut(s)	143, 165, 532, 1059, 1822
BshNI	GGYRCC	1 cut(s)	423
BsiHKAI	GWGCWC	2 cut(s)	1280, 1338
BsiHKCI	CYCGRG	2 cut(s)	391, 1729
BslFI	GGGAC	1 cut(s)	1899
BslI	CCNNNNNNNGG	5 cut(s)	589, 610, 1015, 1134, 1200
BsmAI	GTCTC	2 cut(s)	569, 2065
BsmFI	GGGAC	1 cut(s)	1899
BsnI	GGCC	5 cut(s)	143, 165, 532, 1059, 1822
Bso31I	GGTCTC	1 cut(s)	569
BsoBI	CYCGRG	2 cut(s)	391, 1729
Bsp1286I	GDGCHC	3 cut(s)	980, 1280, 1338
Bsp143I	GATC	8 cut(s)	87, 172, 355, 877, 1087, 1378, 1552, 1572
Bsp1720I	GCTNAGC	1 cut(s)	1918
BspACI	CCGC	5 cut(s)	116, 292, 306, 986, 1708
BspANI	GGCC	5 cut(s)	143, 165, 532, 1059, 1822
BspCNI	CTCAG	7 cut(s)	372, 597, 925, 1350, 1560, 1752, 1931
BspFNI	CGCG	2 cut(s)	292, 1710
BspHI	TCATGA	1 cut(s)	1452
BspLI	GGNNCC	4 cut(s)	425, 841, 1391, 1821
BspMAI	CTGCAG	1 cut(s)	181
BspMI	ACCTGC	1 cut(s)	170
BspPI	GGATC	4 cut(s)	167, 363, 1095, 1580
BspT107I	GGYRCC	1 cut(s)	423
BspTI	CTTAAG	1 cut(s)	301
BspTNI	GGTCTC	1 cut(s)	569
BsrDI	GCAATG	2 cut(s)	259, 2124
BsrI	ACTGG	3 cut(s)	629, 1699, 2086
BssECI	CCNNGG	3 cut(s)	1083, 1193, 1289
BssMI	GATC	8 cut(s)	87, 172, 355, 877, 1087, 1378, 1552, 1572
BssNAI	GTATAC	1 cut(s)	185
BssSI	CACGAG	1 cut(s)	534
BssT1I	CCWWGG	1 cut(s)	1289
Bst1107I	GTATAC	1 cut(s)	185
Bst2BI	CACGAG	1 cut(s)	534
Bst2UI	CCWGG	3 cut(s)	1085, 1195, 2068
Bst4CI	ACNGT	7 cut(s)	212, 239, 287, 949, 968, 1153, 1960
Bst6I	CTCTTC	3 cut(s)	574, 772, 1611
BstAFI	CTTAAG	1 cut(s)	301
BstC8I	GCNNGC	1 cut(s)	838
BstENI	CCTNNNNNAGG	1 cut(s)	608
BstF5I	GGATG	6 cut(s)	228, 387, 1004, 1188, 1343, 1484
BstFNI	CGCG	2 cut(s)	292, 1710
BstKTI	GATC	8 cut(s)	90, 175, 358, 880, 1090, 1381, 1555, 1575
BstMAI	GTCTC	2 cut(s)	569, 2065
BstMBI	GATC	8 cut(s)	87, 172, 355, 877, 1087, 1378, 1552, 1572
BstMWI	GCNNNNNNNGC	2 cut(s)	1275, 1707
BstNI	CCWGG	3 cut(s)	1085, 1195, 2068
BstNSI	RCATGY	1 cut(s)	2078
BstSCI	CCNGG	3 cut(s)	1083, 1193, 2066
BstSFI	CTRYAG	3 cut(s)	177, 235, 283
BstUI	CGCG	2 cut(s)	292, 1710
BstV1I	GCAGC	2 cut(s)	626, 1236
BstV2I	GAAGAC	4 cut(s)	213, 730, 1085, 1546
BstX2I	RGATCY	4 cut(s)	172, 355, 877, 1087
BstXI	CCANNNNNNTGG	3 cut(s)	970, 1400, 1745
BstYI	RGATCY	4 cut(s)	172, 355, 877, 1087
BstZ17I	GTATAC	1 cut(s)	185
BsuRI	GGCC	5 cut(s)	143, 165, 532, 1059, 1822
BtsCI	GGATG	6 cut(s)	228, 387, 1004, 1188, 1343, 1484
BtsIMutI	CAGTG	2 cut(s)	685, 1839
BveI	ACCTGC	1 cut(s)	170
Cac8I	GCNNGC	1 cut(s)	838
CciI	TCATGA	1 cut(s)	1452
Cfr13I	GGNCC	4 cut(s)	142, 1748, 1820, 2064
Csp6I	GTAC	4 cut(s)	288, 424, 798, 1692
CviAII	CATG	7 cut(s)	98, 858, 1453, 1471, 1765, 2075, 2137
CviQI	GTAC	4 cut(s)	288, 424, 798, 1692
DpnI	GATC	8 cut(s)	89, 174, 357, 879, 1089, 1380, 1554, 1574
DpnII	GATC	8 cut(s)	87, 172, 355, 877, 1087, 1378, 1552, 1572
DraIII	CACNNNGTG	1 cut(s)	1511
EaeI	YGGCCR	1 cut(s)	1057
Eam1104I	CTCTTC	3 cut(s)	574, 772, 1611
EarI	CTCTTC	3 cut(s)	574, 772, 1611
Ecl136II	GAGCTC	1 cut(s)	1336
Eco130I	CCWWGG	1 cut(s)	1289
Eco147I	AGGCCT	1 cut(s)	165
Eco24I	GRGCYC	2 cut(s)	980, 1338
Eco31I	GGTCTC	1 cut(s)	569
Eco32I	GATATC	1 cut(s)	1468
Eco47I	GGWCC	2 cut(s)	1748, 2064
Eco53kI	GAGCTC	1 cut(s)	1336
Eco88I	CYCGRG	2 cut(s)	391, 1729
EcoICRI	GAGCTC	1 cut(s)	1336
EcoNI	CCTNNNNNAGG	1 cut(s)	608
EcoO109I	RGGNCCY	3 cut(s)	142, 1820, 2064
EcoRI	GAATTC	1 cut(s)	381
EcoRII	CCWGG	3 cut(s)	1083, 1193, 2066
EcoRV	GATATC	1 cut(s)	1468
EcoT14I	CCWWGG	1 cut(s)	1289
EcoT38I	GRGCYC	2 cut(s)	980, 1338
ErhI	CCWWGG	1 cut(s)	1289
FaeI	CATG	7 cut(s)	101, 861, 1456, 1474, 1768, 2078, 2140
FaqI	GGGAC	1 cut(s)	1899
FatI	CATG	7 cut(s)	97, 857, 1452, 1470, 1764, 2074, 2136
FauNDI	CATATG	1 cut(s)	712
FbaI	TGATCA	1 cut(s)	87
FblI	GTMKAC	1 cut(s)	184
Fnu4HI	GCNGC	4 cut(s)	117, 615, 1250, 1708
FokI	GGATG	6 cut(s)	235, 374, 991, 1175, 1330, 1471
FriOI	GRGCYC	2 cut(s)	980, 1338
Fsp4HI	GCNGC	4 cut(s)	117, 615, 1250, 1708
FspBI	CTAG	5 cut(s)	161, 273, 1095, 1290, 1556
GluI	GCNGC	4 cut(s)	117, 615, 1250, 1708
GsuI	CTGGAG	1 cut(s)	2089
HaeIII	GGCC	5 cut(s)	143, 165, 532, 1059, 1822
Hin1II	CATG	7 cut(s)	101, 861, 1456, 1474, 1768, 2078, 2140
HincII	GTYRAC	2 cut(s)	830, 1635
HindII	GTYRAC	2 cut(s)	830, 1635
HindIII	AAGCTT	4 cut(s)	263, 905, 1267, 1699
HinfI	GANTC	6 cut(s)	320, 539, 959, 1715, 1897, 2016
HphI	GGTGA	5 cut(s)	49, 320, 647, 1946, 2065
Hpy166II	GTNNAC	6 cut(s)	185, 683, 718, 830, 1635, 1837
Hpy188I	TCNGA	6 cut(s)	544, 934, 1240, 1385, 1552, 1761
Hpy8I	GTNNAC	6 cut(s)	185, 683, 718, 830, 1635, 1837
Hpy99I	CGWCG	1 cut(s)	1931
HpyAV	CCTTC	6 cut(s)	133, 660, 1134, 1198, 1501, 1528
HpyCH4III	ACNGT	7 cut(s)	212, 239, 287, 949, 968, 1153, 1960
HpyCH4IV	ACGT	1 cut(s)	725
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1275, 1707
HpySE526I	ACGT	1 cut(s)	725
Hsp92II	CATG	7 cut(s)	101, 861, 1456, 1474, 1768, 2078, 2140
KpnI	GGTACC	1 cut(s)	427
Ksp22I	TGATCA	1 cut(s)	87
Kzo9I	GATC	8 cut(s)	87, 172, 355, 877, 1087, 1378, 1552, 1572
LmnI	GCTCC	2 cut(s)	845, 1333
Lsp1109I	GCAGC	2 cut(s)	626, 1236
LweI	GCATC	1 cut(s)	1927
MaeI	CTAG	5 cut(s)	161, 273, 1095, 1290, 1556
MaeII	ACGT	1 cut(s)	725
MaeIII	GTNAC	8 cut(s)	239, 405, 627, 726, 805, 943, 1479, 1733
MalI	GATC	8 cut(s)	89, 174, 357, 879, 1089, 1380, 1554, 1574
MboI	GATC	8 cut(s)	87, 172, 355, 877, 1087, 1378, 1552, 1572
MfeI	CAATTG	1 cut(s)	550
MflI	RGATCY	4 cut(s)	172, 355, 877, 1087
MhlI	GDGCHC	3 cut(s)	980, 1280, 1338
MlsI	TGGCCA	1 cut(s)	1059
MluNI	TGGCCA	1 cut(s)	1059
MlyI	GAGTC	1 cut(s)	953
MmeI	TCCRAC	2 cut(s)	639, 987
Mox20I	TGGCCA	1 cut(s)	1059
MroXI	GAANNNNTTC	2 cut(s)	1419, 1841
MscI	TGGCCA	1 cut(s)	1059
MslI	CAYNNNNRTG	2 cut(s)	1232, 1743
Msp20I	TGGCCA	1 cut(s)	1059
MspCI	CTTAAG	1 cut(s)	301
MspR9I	CCNGG	3 cut(s)	1085, 1195, 2068
MunI	CAATTG	1 cut(s)	550
MvaI	CCWGG	3 cut(s)	1085, 1195, 2068
MvnI	CGCG	2 cut(s)	292, 1710
MwoI	GCNNNNNNNGC	2 cut(s)	1275, 1707
NdeI	CATATG	1 cut(s)	712
NdeII	GATC	8 cut(s)	87, 172, 355, 877, 1087, 1378, 1552, 1572
NlaIII	CATG	7 cut(s)	101, 861, 1456, 1474, 1768, 2078, 2140
NlaIV	GGNNCC	4 cut(s)	425, 841, 1391, 1821
NmuCI	GTSAC	3 cut(s)	405, 726, 805
NspI	RCATGY	1 cut(s)	2078
PaeR7I	CTCGAG	1 cut(s)	1729
PagI	TCATGA	1 cut(s)	1452
PceI	AGGCCT	1 cut(s)	165
PdmI	GAANNNNTTC	2 cut(s)	1419, 1841
PfeI	GAWTC	5 cut(s)	320, 539, 1715, 1897, 2016
PfoI	TCCNGGA	1 cut(s)	2066
PkrI	GCNGC	4 cut(s)	118, 616, 1251, 1709
PleI	GAGTC	1 cut(s)	953
PpsI	GAGTC	1 cut(s)	953
PpuMI	RGGWCCY	1 cut(s)	2064
PshBI	ATTAAT	2 cut(s)	813, 1526
PsiI	TTATAA	1 cut(s)	366
Psp124BI	GAGCTC	1 cut(s)	1338
Psp5II	RGGWCCY	1 cut(s)	2064
Psp6I	CCWGG	3 cut(s)	1083, 1193, 2066
PspGI	CCWGG	3 cut(s)	1083, 1193, 2066
PspN4I	GGNNCC	4 cut(s)	425, 841, 1391, 1821
PspPI	GGNCC	4 cut(s)	142, 1748, 1820, 2064
PspPPI	RGGWCCY	1 cut(s)	2064
PsrI	GAACNNNNNNTAC	2 cut(s)	1787, 1819
PstI	CTGCAG	1 cut(s)	181
PsuI	RGATCY	4 cut(s)	172, 355, 877, 1087
RsaI	GTAC	4 cut(s)	289, 425, 799, 1693
RsaNI	GTAC	4 cut(s)	288, 424, 798, 1692
RseI	CAYNNNNRTG	2 cut(s)	1232, 1743
SacI	GAGCTC	1 cut(s)	1338
SatI	GCNGC	4 cut(s)	117, 615, 1250, 1708
Sau3AI	GATC	8 cut(s)	87, 172, 355, 877, 1087, 1378, 1552, 1572
Sau96I	GGNCC	4 cut(s)	142, 1748, 1820, 2064
SbfI	CCTGCAGG	1 cut(s)	181
ScaI	AGTACT	1 cut(s)	1693
SchI	GAGTC	1 cut(s)	953
ScrFI	CCNGG	3 cut(s)	1085, 1195, 2068
SdaI	CCTGCAGG	1 cut(s)	181
SduI	GDGCHC	3 cut(s)	980, 1280, 1338
SfaNI	GCATC	1 cut(s)	1927
SfcI	CTRYAG	3 cut(s)	177, 235, 283
Sfr274I	CTCGAG	1 cut(s)	1729
SinI	GGWCC	2 cut(s)	1748, 2064
SlaI	CTCGAG	1 cut(s)	1729
SmiMI	CAYNNNNRTG	2 cut(s)	1232, 1743
SmlI	CTYRAG	4 cut(s)	301, 410, 1702, 1729
SmoI	CTYRAG	4 cut(s)	301, 410, 1702, 1729
Sse8387I	CCTGCAGG	1 cut(s)	181
SseBI	AGGCCT	1 cut(s)	165
SsiI	CCGC	5 cut(s)	116, 292, 306, 986, 1708
SspMI	CTAG	5 cut(s)	161, 273, 1095, 1290, 1556
SstI	GAGCTC	1 cut(s)	1338
StuI	AGGCCT	1 cut(s)	165
StyD4I	CCNGG	3 cut(s)	1083, 1193, 2066
StyI	CCWWGG	1 cut(s)	1289
TaaI	ACNGT	7 cut(s)	212, 239, 287, 949, 968, 1153, 1960
TaiI	ACGT	1 cut(s)	728
TaqI	TCGA	3 cut(s)	741, 1730, 1926
TatI	WGTACW	1 cut(s)	1691
TauI	GCSGC	2 cut(s)	119, 1710
TfiI	GAWTC	5 cut(s)	320, 539, 1715, 1897, 2016
TscAI	CASTG	2 cut(s)	685, 1839
TseFI	GTSAC	3 cut(s)	405, 726, 805
TseI	GCWGC	2 cut(s)	614, 1249
Tsp45I	GTSAC	3 cut(s)	405, 726, 805
TspDTI	ATGAA	9 cut(s)	452, 642, 759, 846, 1469, 1983, 1995, 2008, 2117
TspRI	CASTG	2 cut(s)	685, 1839
Vha464I	CTTAAG	1 cut(s)	301
VpaK11BI	GGWCC	2 cut(s)	1748, 2064
VspI	ATTAAT	2 cut(s)	813, 1526
XagI	CCTNNNNNAGG	1 cut(s)	608
XapI	RAATTY	6 cut(s)	106, 152, 381, 1041, 1144, 1651
XceI	RCATGY	1 cut(s)	2078
XhoI	CTCGAG	1 cut(s)	1729
XmaJI	CCTAGG	1 cut(s)	1289
XmiI	GTMKAC	1 cut(s)	184
XmnI	GAANNNNTTC	2 cut(s)	1419, 1841
XspI	CTAG	5 cut(s)	161, 273, 1095, 1290, 1556
ZrmI	AGTACT	1 cut(s)	1693

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.