Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000285

Physical Location & Seq

Genomic Coordinates Reverse (-)

47088735 .. 47090108

Gene Structure 1374 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ57952

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1059 bp

ATGGATGTACAACAATTTGTAGAGGCTTTGTCTACATGCAGTAATAGTAGCTTAGAAGTGCTAGATTTCATGTCAAGTAATCTCCATGGATCACTGCCTGAATCTTTGGGATCCCTTAAATATTTGGAAAGTCTTGGGTTCATAAAGAACTCATTCTCGGGTCCTCTCCCAGCCACAATAGGAAATCTGTCACATTTGCAGGTCCTGGACCTGGCCTTCAACAACATGATGAATGGCACCATCCCAGAAAGTATCGGACAACTTTCAGAGTTGAGAGCATCGTTATTCTTGGAGTCTGGGGTGGTTCATGGGAAGGTTGATTGCAAACTGATGAATCCCGCTTTTCCAATGTGGCTCAGAAATCAGAGTTTCCTCGATGAAATAAATTTCTCAAATGTTGGAATTTCAGCTGCAATACCTGATTGGTTTTGGAAAATGTCACAATCTTATTATGATTGGTGGTTTACTGTGGATCTCTCTGATAATCAATTGAGAGGGCGCCTTCCAAGCACAGTAAATTTTTCTGTTGGAGCATACGTTAATTTGTACAACAACGTCTTGGAGGGTTCTCTTCCACTTTGGCAAAATGTAACGGAGCTCAGCTTGGCAGACAATAGATTTTCCGGACCAATTCCCTTGAGCATTGGCGAGGAGATGCCAAATATGGTGACCCTAGATCTTTCTAGGAATGACCTGATTGGTAGCAAACCCGCTTCCATAACAAAACTCAAGAAATTGGTTTCGCTTGATCTCTCAAGGAATCATCTGTCTGGAACCATCCCCAGGTTAATAATGACTAGCACCATAGATTTTTCCAACAACAATCTATCTGGTCAAATTCTACGCTTCATGTGCTCACAACTATCTTCAGTGTCCTGGCTGAGATTAAGCAACAACTGTACAAGACTGTTTACGCTTGATCTTGGTGGGAACAAATTGTCAGGGAGCATACCAGAGTGGATTGGAAAAAATCTGTATGTATTAATTCTCGGAGCCAACAGATTCACTGGAAGTATGATGATGATGAGGATGGTTCCGGATATAAAGGGCTGTATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010232 GO:0010233 GO:0010305 GO:0014070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

352

Amino Acids

39.06

Weight (kDa)

5.62

Isoelectric Point (pI)

31.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	16 - 92	1.9e-07	Leucine-rich repeat region
LRR_8	PF13855	196 - 256	1.1e-07	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47885
fragaria_vesca	FvH4_3g09550 FvH4_4g32560
malus_domestica	MD01G1172200.v1.1
rosa_chinensis	RchiOBHm_Chr1g0353911 RchiOBHm_Chr1g0354141 RchiOBHm_Chr1g0354151 RchiOBHm_Chr1g0354161 RchiOBHm_Chr1g0354191 RchiOBHm_Chr1g0354201 RchiOBHm_Chr1g0354221 RchiOBHm_Chr1g0354271 RchiOBHm_Chr1g0354301 RchiOBHm_Chr1g0354321 RchiOBHm_Chr1g0354371 RchiOBHm_Chr1g0354401 RchiOBHm_Chr1g0354411 RchiOBHm_Chr1g0354451 RchiOBHm_Chr1g0354551 RchiOBHm_Chr1g0359231 RchiOBHm_Chr3g0470501 RchiOBHm_Chr4g0440611 RchiOBHm_Chr4g0440631 RchiOBHm_Chr4g0441421 RchiOBHm_Chr4g0441431 RchiOBHm_Chr5g0015191 RchiOBHm_Chr5g0022441 RchiOBHm_Chr7g0207081
rosa_laevigata	RLG00000009355 RLG00000009356 RLG00000023813 RLG00000024262 RLG00000028199 RLG00000028200 RLG00000028204 RLG00000028209 RLG00000028211 RLG00000028214 RLG00000028216 RLG00000028220 RLG00000028221 RLG00000028223 RLG00000028224 RLG00000028886 RLG00000029706 RLG00000032176
rosa_multiflora	Rmu_co8366321.1_g000001 Rmu_sc0001926.1_g000008 Rmu_sc0001926.1_g000009 Rmu_sc0002115.1_g000006 Rmu_sc0002115.1_g000007 Rmu_sc0002209.1_g000020 Rmu_sc0002737.1_g000005 Rmu_sc0002737.1_g000009 Rmu_sc0002737.1_g000015 Rmu_sc0002737.1_g000016 Rmu_sc0002737.1_g000018 Rmu_sc0002930.1_g000003 Rmu_sc0002930.1_g000005 Rmu_sc0003292.1_g000004 Rmu_sc0003360.1_g000004 Rmu_sc0003360.1_g000005 Rmu_sc0003381.1_g000013 Rmu_sc0004299.1_g000001 Rmu_sc0007159.1_g000001 Rmu_sc0007159.1_g000007 Rmu_sc0009777.1_g000002 Rmu_sc0010755.1_g000002 Rmu_sc0012353.1_g000001 Rmu_sc0012562.1_g000003 Rmu_sc0012562.1_g000004 Rmu_sc0012562.1_g000006 Rmu_sc0012562.1_g000013 Rmu_sc0012562.1_g000021 Rmu_sc0015525.1_g000001 Rmu_sc0015525.1_g000005 Rmu_sc0018378.1_g000001 Rmu_sc0022127.1_g000002 Rmu_sc0022144.1_g000002 Rmu_sc0035791.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056680 Rroxscaffold_1G00061360 Rroxscaffold_3G00236900 Rroxscaffold_4G00300940 Rroxscaffold_4G00301040 Rroxscaffold_4G00301050 Rroxscaffold_4G00301070 Rroxscaffold_4G00301100 Rroxscaffold_4G00301110 Rroxscaffold_4G00301930 Rroxscaffold_4G00301940 Rroxscaffold_4G00301950 Rroxscaffold_7G00202690
rosa_rugosa	Rorug01G0242000 Rorug01G0242100 Rorug01G0242200 Rorug01G0242300 Rorug01G0242700 Rorug01G0242900 Rorug01G0243000 Rorug03G0109600 Rorug03G0109700 Rorug04G0327000 Rorug04G0333500 Rorug04G0333600 Rorug05G0024600 RorugPtG0003000
rosa_samantha	Rh1AG253200 Rh1AG253400 Rh1BG225200 Rh1CG177100 Rh1CG234500 Rh1CG237000 Rh1DG252000 Rh1DG252400 Rh1DG252900 Rh3CG085900 Rh4BG399300 Rh4DG391900
rosa_wichuraiana	Rw1G015760 Rw1G022030 Rw1G022100 Rw1G022120 Rw1G022230 Rw5G010290

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	190
AccB1I	GGYRCC	2 cut(s)	236, 498
AccI	GTMKAC	1 cut(s)	32
AccIII	TCCGGA	2 cut(s)	623, 1036
AciI	CCGC	2 cut(s)	339, 711
AclWI	GGATC	4 cut(s)	97, 105, 118, 480
AcsI	RAATTY	4 cut(s)	385, 402, 517, 837
AcuI	CTGAAG	1 cut(s)	852
AcyI	GRCGYC	1 cut(s)	499
AfaI	GTAC	3 cut(s)	9, 548, 901
AfiI	CCNNNNNNNGG	2 cut(s)	211, 783
AgsI	TTSAA	1 cut(s)	220
AjnI	CCWGG	4 cut(s)	204, 210, 782, 875
AluBI	AGCT	4 cut(s)	51, 410, 598, 603
AluI	AGCT	4 cut(s)	51, 410, 598, 603
Alw21I	GWGCWC	2 cut(s)	600, 857
AlwI	GGATC	4 cut(s)	97, 105, 118, 480
AlwNI	CAGNNNCTG	1 cut(s)	205
Ama87I	CYCGRG	1 cut(s)	157
Aor13HI	TCCGGA	2 cut(s)	623, 1036
AoxI	GGCC	1 cut(s)	213
ApeKI	GCWGC	1 cut(s)	410
ApoI	RAATTY	4 cut(s)	385, 402, 517, 837
AseI	ATTAAT	1 cut(s)	983
Asp700I	GAANNNNTTC	1 cut(s)	152
AspLEI	GCGC	1 cut(s)	501
AspS9I	GGNCC	4 cut(s)	161, 202, 208, 626
AsuHPI	GGTGA	1 cut(s)	679
AvaI	CYCGRG	1 cut(s)	157
AvaII	GGWCC	4 cut(s)	161, 202, 208, 626
BamHI	GGATCC	1 cut(s)	110
BanI	GGYRCC	2 cut(s)	236, 498
BanII	GRGCYC	1 cut(s)	600
Bbv12I	GWGCWC	2 cut(s)	600, 857
BbvI	GCAGC	1 cut(s)	397
BccI	CCATC	3 cut(s)	248, 785, 1024
BciT130I	CCWGG	4 cut(s)	206, 212, 784, 877
BfaI	CTAG	4 cut(s)	62, 674, 684, 798
BfoI	RGCGCY	1 cut(s)	502
BfuAI	ACCTGC	1 cut(s)	190
BglII	AGATCT	1 cut(s)	676
BisI	GCNGC	1 cut(s)	411
BlpI	GCTNAGC	1 cut(s)	599
BlsI	GCNGC	1 cut(s)	412
Bme1390I	CCNGG	4 cut(s)	206, 212, 784, 877
Bme18I	GGWCC	4 cut(s)	161, 202, 208, 626
BmeT110I	CYCGRG	1 cut(s)	157
BmgT120I	GGNCC	4 cut(s)	161, 202, 208, 626
BmiI	GGNNCC	7 cut(s)	112, 162, 238, 500, 775, 994, 1035
BmrFI	CCNGG	4 cut(s)	206, 212, 784, 877
BmsI	GCATC	2 cut(s)	287, 645
Bpu1102I	GCTNAGC	1 cut(s)	599
BpuEI	CTTGAG	3 cut(s)	658, 713, 739
BsaHI	GRCGYC	1 cut(s)	499
BsaJI	CCNNGG	2 cut(s)	85, 782
BsaWI	WCCGGW	2 cut(s)	623, 1036
BsaXI	ACNNNNNCTCC	2 cut(s)	522, 552
Bsc4I	CCNNNNNNNGG	2 cut(s)	211, 783
Bse1I	ACTGG	1 cut(s)	1012
BseAI	TCCGGA	2 cut(s)	623, 1036
BseBI	CCWGG	4 cut(s)	206, 212, 784, 877
BseDI	CCNNGG	2 cut(s)	85, 782
BseGI	GGATG	4 cut(s)	10, 240, 777, 1035
BseLI	CCNNNNNNNGG	2 cut(s)	211, 783
BseMII	CTCAG	3 cut(s)	370, 613, 872
BseNI	ACTGG	1 cut(s)	1012
BseRI	GAGGAG	1 cut(s)	665
BseXI	GCAGC	1 cut(s)	397
BseYI	CCCAGC	1 cut(s)	169
BshFI	GGCC	1 cut(s)	215
BshNI	GGYRCC	2 cut(s)	236, 498
BsiHKAI	GWGCWC	2 cut(s)	600, 857
BsiHKCI	CYCGRG	1 cut(s)	157
BsiSI	CCGG	2 cut(s)	624, 1037
BslI	CCNNNNNNNGG	2 cut(s)	211, 783
BsnI	GGCC	1 cut(s)	215
BsoBI	CYCGRG	1 cut(s)	157
Bsp1286I	GDGCHC	2 cut(s)	600, 857
Bsp13I	TCCGGA	2 cut(s)	623, 1036
Bsp1407I	TGTACA	3 cut(s)	7, 546, 899
Bsp143I	GATC	6 cut(s)	89, 110, 472, 676, 748, 919
Bsp1720I	GCTNAGC	1 cut(s)	599
Bsp19I	CCATGG	1 cut(s)	85
BspACI	CCGC	2 cut(s)	339, 711
BspANI	GGCC	1 cut(s)	215
BspCNI	CTCAG	3 cut(s)	369, 612, 873
BspEI	TCCGGA	2 cut(s)	623, 1036
BspLI	GGNNCC	7 cut(s)	112, 162, 238, 500, 775, 994, 1035
BspMI	ACCTGC	1 cut(s)	190
BspPI	GGATC	4 cut(s)	97, 105, 118, 480
BspT107I	GGYRCC	2 cut(s)	236, 498
BsrGI	TGTACA	3 cut(s)	7, 546, 899
BsrI	ACTGG	1 cut(s)	1012
BssECI	CCNNGG	2 cut(s)	85, 782
BssMI	GATC	6 cut(s)	89, 110, 472, 676, 748, 919
BssNI	GRCGYC	1 cut(s)	499
BssT1I	CCWWGG	1 cut(s)	85
Bst2UI	CCWGG	4 cut(s)	206, 212, 784, 877
Bst4CI	ACNGT	4 cut(s)	469, 514, 899, 909
Bst6I	CTCTTC	1 cut(s)	576
BstACI	GRCGYC	1 cut(s)	499
BstAUI	TGTACA	3 cut(s)	7, 546, 899
BstDEI	CTNAG	4 cut(s)	52, 356, 599, 881
BstDSI	CCRYGG	1 cut(s)	85
BstEII	GGTNACC	1 cut(s)	667
BstF5I	GGATG	4 cut(s)	10, 240, 777, 1035
BstH2I	RGCGCY	1 cut(s)	502
BstHHI	GCGC	1 cut(s)	501
BstKTI	GATC	6 cut(s)	92, 113, 475, 679, 751, 922
BstMBI	GATC	6 cut(s)	89, 110, 472, 676, 748, 919
BstMWI	GCNNNNNNNGC	2 cut(s)	507, 852
BstNI	CCWGG	4 cut(s)	206, 212, 784, 877
BstNSI	RCATGY	1 cut(s)	39
BstPI	GGTNACC	1 cut(s)	667
BstSCI	CCNGG	4 cut(s)	204, 210, 782, 875
BstV1I	GCAGC	1 cut(s)	397
BstX2I	RGATCY	3 cut(s)	110, 472, 676
BstYI	RGATCY	3 cut(s)	110, 472, 676
BsuRI	GGCC	1 cut(s)	215
BtgI	CCRYGG	1 cut(s)	85
BtsCI	GGATG	4 cut(s)	10, 240, 777, 1035
BtsI	GCAGTG	1 cut(s)	92
BtsIMutI	CAGTG	3 cut(s)	92, 876, 1005
BveI	ACCTGC	1 cut(s)	190
CaiI	CAGNNNCTG	1 cut(s)	205
CfoI	GCGC	1 cut(s)	501
Cfr13I	GGNCC	4 cut(s)	161, 202, 208, 626
Csp6I	GTAC	3 cut(s)	8, 547, 900
CviAII	CATG	6 cut(s)	36, 70, 86, 226, 308, 850
CviQI	GTAC	3 cut(s)	8, 547, 900
DdeI	CTNAG	4 cut(s)	52, 356, 599, 881
DinI	GGCGCC	1 cut(s)	500
DpnI	GATC	6 cut(s)	91, 112, 474, 678, 750, 921
DpnII	GATC	6 cut(s)	89, 110, 472, 676, 748, 919
Eam1104I	CTCTTC	1 cut(s)	576
EarI	CTCTTC	1 cut(s)	576
Ecl136II	GAGCTC	1 cut(s)	598
Eco130I	CCWWGG	1 cut(s)	85
Eco24I	GRGCYC	1 cut(s)	600
Eco47I	GGWCC	4 cut(s)	161, 202, 208, 626
Eco53kI	GAGCTC	1 cut(s)	598
Eco57I	CTGAAG	1 cut(s)	852
Eco88I	CYCGRG	1 cut(s)	157
Eco91I	GGTNACC	1 cut(s)	667
EcoICRI	GAGCTC	1 cut(s)	598
EcoO109I	RGGNCCY	2 cut(s)	161, 202
EcoO65I	GGTNACC	1 cut(s)	667
EcoRII	CCWGG	4 cut(s)	204, 210, 782, 875
EcoT14I	CCWWGG	1 cut(s)	85
EcoT38I	GRGCYC	1 cut(s)	600
EgeI	GGCGCC	1 cut(s)	500
EheI	GGCGCC	1 cut(s)	500
ErhI	CCWWGG	1 cut(s)	85
FaeI	CATG	6 cut(s)	39, 73, 89, 229, 311, 853
FatI	CATG	6 cut(s)	35, 69, 85, 225, 307, 849
FauI	CCCGC	2 cut(s)	346, 718
FblI	GTMKAC	1 cut(s)	32
Fnu4HI	GCNGC	1 cut(s)	411
FokI	GGATG	4 cut(s)	17, 227, 764, 1042
FriOI	GRGCYC	1 cut(s)	600
Fsp4HI	GCNGC	1 cut(s)	411
FspBI	CTAG	4 cut(s)	62, 674, 684, 798
GlaI	GCGC	1 cut(s)	500
GluI	GCNGC	1 cut(s)	411
GsaI	CCCAGC	1 cut(s)	173
HaeII	RGCGCY	1 cut(s)	502
HaeIII	GGCC	1 cut(s)	215
HapII	CCGG	2 cut(s)	624, 1037
HhaI	GCGC	1 cut(s)	501
Hin1I	GRCGYC	1 cut(s)	499
Hin1II	CATG	6 cut(s)	39, 73, 89, 229, 311, 853
Hin6I	GCGC	1 cut(s)	499
HinP1I	GCGC	1 cut(s)	499
HinfI	GANTC	5 cut(s)	101, 293, 334, 760, 1002
HpaII	CCGG	2 cut(s)	624, 1037
HphI	GGTGA	1 cut(s)	679
Hpy166II	GTNNAC	3 cut(s)	33, 465, 912
Hpy188I	TCNGA	6 cut(s)	257, 268, 359, 366, 481, 992
Hpy188III	TCNNGA	4 cut(s)	624, 730, 771, 1037
Hpy8I	GTNNAC	3 cut(s)	33, 465, 912
HpyAV	CCTTC	3 cut(s)	226, 307, 512
HpyCH4III	ACNGT	4 cut(s)	469, 514, 899, 909
HpyCH4IV	ACGT	2 cut(s)	537, 555
HpyCH4V	TGCA	4 cut(s)	39, 199, 324, 413
HpyF10VI	GCNNNNNNNGC	2 cut(s)	507, 852
HpyF3I	CTNAG	4 cut(s)	52, 356, 599, 881
HpySE526I	ACGT	2 cut(s)	537, 555
Hsp92I	GRCGYC	1 cut(s)	499
Hsp92II	CATG	6 cut(s)	39, 73, 89, 229, 311, 853
HspAI	GCGC	1 cut(s)	499
KasI	GGCGCC	1 cut(s)	498
Kpn2I	TCCGGA	2 cut(s)	623, 1036
Kzo9I	GATC	6 cut(s)	89, 110, 472, 676, 748, 919
LmnI	GCTCC	4 cut(s)	530, 595, 945, 992
Lsp1109I	GCAGC	1 cut(s)	397
LweI	GCATC	2 cut(s)	287, 645
MaeI	CTAG	4 cut(s)	62, 674, 684, 798
MaeII	ACGT	2 cut(s)	537, 555
MaeIII	GTNAC	4 cut(s)	189, 438, 589, 667
MalI	GATC	6 cut(s)	91, 112, 474, 678, 750, 921
MboI	GATC	6 cut(s)	89, 110, 472, 676, 748, 919
MboII	GAAGA	2 cut(s)	563, 858
MfeI	CAATTG	1 cut(s)	488
MflI	RGATCY	3 cut(s)	110, 472, 676
MhlI	GDGCHC	2 cut(s)	600, 857
Mly113I	GGCGCC	1 cut(s)	499
MlyI	GAGTC	1 cut(s)	302
MmeI	TCCRAC	3 cut(s)	379, 508, 840
MnlI	CCTC	7 cut(s)	16, 174, 383, 488, 556, 643, 1020
MroI	TCCGGA	2 cut(s)	623, 1036
MroXI	GAANNNNTTC	1 cut(s)	152
MseI	TTAA	5 cut(s)	117, 540, 788, 887, 983
MspA1I	CMGCKG	1 cut(s)	410
MspI	CCGG	2 cut(s)	624, 1037
MspR9I	CCNGG	4 cut(s)	206, 212, 784, 877
MunI	CAATTG	1 cut(s)	488
MvaI	CCWGG	4 cut(s)	206, 212, 784, 877
MwoI	GCNNNNNNNGC	2 cut(s)	507, 852
NarI	GGCGCC	1 cut(s)	499
NcoI	CCATGG	1 cut(s)	85
NdeII	GATC	6 cut(s)	89, 110, 472, 676, 748, 919
NlaIII	CATG	6 cut(s)	39, 73, 89, 229, 311, 853
NlaIV	GGNNCC	7 cut(s)	112, 162, 238, 500, 775, 994, 1035
NmuCI	GTSAC	3 cut(s)	189, 438, 667
NspI	RCATGY	1 cut(s)	39
PdmI	GAANNNNTTC	1 cut(s)	152
PfeI	GAWTC	4 cut(s)	101, 334, 760, 1002
PfoI	TCCNGGA	1 cut(s)	204
PkrI	GCNGC	1 cut(s)	412
PleI	GAGTC	1 cut(s)	301
PluTI	GGCGCC	1 cut(s)	502
PpsI	GAGTC	1 cut(s)	301
PpuMI	RGGWCCY	2 cut(s)	161, 202
PshBI	ATTAAT	1 cut(s)	983
Psp124BI	GAGCTC	1 cut(s)	600
Psp5II	RGGWCCY	2 cut(s)	161, 202
Psp6I	CCWGG	4 cut(s)	204, 210, 782, 875
PspEI	GGTNACC	1 cut(s)	667
PspFI	CCCAGC	1 cut(s)	169
PspGI	CCWGG	4 cut(s)	204, 210, 782, 875
PspN4I	GGNNCC	7 cut(s)	112, 162, 238, 500, 775, 994, 1035
PspPI	GGNCC	4 cut(s)	161, 202, 208, 626
PspPPI	RGGWCCY	2 cut(s)	161, 202
PstNI	CAGNNNCTG	1 cut(s)	205
PsuI	RGATCY	3 cut(s)	110, 472, 676
PvuII	CAGCTG	1 cut(s)	410
RsaI	GTAC	3 cut(s)	9, 548, 901
RsaNI	GTAC	3 cut(s)	8, 547, 900
SacI	GAGCTC	1 cut(s)	600
SaqAI	TTAA	5 cut(s)	117, 540, 788, 887, 983
SatI	GCNGC	1 cut(s)	411
Sau3AI	GATC	6 cut(s)	89, 110, 472, 676, 748, 919
Sau96I	GGNCC	4 cut(s)	161, 202, 208, 626
SchI	GAGTC	1 cut(s)	302
ScrFI	CCNGG	4 cut(s)	206, 212, 784, 877
SduI	GDGCHC	2 cut(s)	600, 857
SfaNI	GCATC	2 cut(s)	287, 645
SfoI	GGCGCC	1 cut(s)	500
SinI	GGWCC	4 cut(s)	161, 202, 208, 626
SmlI	CTYRAG	3 cut(s)	637, 728, 754
SmoI	CTYRAG	3 cut(s)	637, 728, 754
SsiI	CCGC	2 cut(s)	339, 711
SspDI	GGCGCC	1 cut(s)	498
SspI	AATATT	1 cut(s)	122
SspMI	CTAG	4 cut(s)	62, 674, 684, 798
SstI	GAGCTC	1 cut(s)	600
StyD4I	CCNGG	4 cut(s)	204, 210, 782, 875
StyI	CCWWGG	1 cut(s)	85
TaaI	ACNGT	4 cut(s)	469, 514, 899, 909
TaiI	ACGT	2 cut(s)	540, 558
TaqI	TCGA	1 cut(s)	375
TatI	WGTACW	3 cut(s)	7, 546, 899
TfiI	GAWTC	4 cut(s)	101, 334, 760, 1002
Tru1I	TTAA	5 cut(s)	117, 540, 788, 887, 983
Tru9I	TTAA	5 cut(s)	117, 540, 788, 887, 983
TscAI	CASTG	3 cut(s)	99, 876, 1012
TseFI	GTSAC	3 cut(s)	189, 438, 667
TseI	GCWGC	1 cut(s)	410
Tsp45I	GTSAC	3 cut(s)	189, 438, 667
TspDTI	ATGAA	7 cut(s)	58, 130, 245, 296, 347, 393, 838
TspGWI	ACGGA	1 cut(s)	608
TspRI	CASTG	3 cut(s)	99, 876, 1012
VpaK11BI	GGWCC	4 cut(s)	161, 202, 208, 626
VspI	ATTAAT	1 cut(s)	983
XapI	RAATTY	4 cut(s)	385, 402, 517, 837
XceI	RCATGY	1 cut(s)	39
XmiI	GTMKAC	1 cut(s)	32
XmnI	GAANNNNTTC	1 cut(s)	152
XspI	CTAG	4 cut(s)	62, 674, 684, 798

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.